Title: Create Interactive Timeline Visualizations in R
Description: Create rich and fully interactive timeline visualizations.
Timelines can be included in Shiny apps and R markdown documents, or viewed
from the R console and 'RStudio' Viewer. 'timevis' includes an extensive API
to manipulate a timeline after creation, and supports getting data out of
the visualization into R. Based on the 'vis.js' Timeline module and the
'htmlwidgets' R package.
Author: Dean Attali [aut, cre] (R interface,
<https://orcid.org/0000-0002-5645-3493>),
Almende B.V. [aut, cph] (vis.js library, https://visjs.org)
Maintainer: Dean Attali <daattali@gmail.com>
Diff between timevis versions 1.0.0 dated 2020-09-16 and 2.0.0 dated 2021-12-20
timevis-1.0.0/timevis/inst/htmlwidgets/lib/vis-4.16.1 |only timevis-2.0.0/timevis/DESCRIPTION | 11 timevis-2.0.0/timevis/MD5 | 55 - timevis-2.0.0/timevis/NEWS.md | 7 timevis-2.0.0/timevis/R/api.R | 12 timevis-2.0.0/timevis/R/timevis.R | 49 - timevis-2.0.0/timevis/README.md | 141 ++- timevis-2.0.0/timevis/inst/doc/timevis.Rmd | 42 - timevis-2.0.0/timevis/inst/doc/timevis.html | 752 ++++++++---------- timevis-2.0.0/timevis/inst/example/www/help.md | 4 timevis-2.0.0/timevis/inst/htmlwidgets/lib/vis-7.4.9 |only timevis-2.0.0/timevis/inst/htmlwidgets/timevis.js | 38 timevis-2.0.0/timevis/inst/htmlwidgets/timevis.yaml | 10 timevis-2.0.0/timevis/inst/img/hex.png |only timevis-2.0.0/timevis/man/centerItem.Rd | 2 timevis-2.0.0/timevis/man/centerTime.Rd | 2 timevis-2.0.0/timevis/man/fitWindow.Rd | 2 timevis-2.0.0/timevis/man/setSelection.Rd | 2 timevis-2.0.0/timevis/man/setWindow.Rd | 2 timevis-2.0.0/timevis/man/timevis.Rd | 42 - timevis-2.0.0/timevis/vignettes/timevis.Rmd | 42 - 21 files changed, 672 insertions(+), 543 deletions(-)
Title: Tools for Designing and Weighting Survey Samples
Description: Functions and datasets to support Valliant, Dever, and Kreuter, Practical Tools for Designing and Weighting Survey Samples (2nd edition, 2018). Contains functions for sample size calculation for survey samples using stratified or clustered one-, two-, and three-stage sample designs. Other functions compute variance components for multistage designs and sample sizes in two-phase designs. A number of example data sets are included.
Author: Richard Valliant [aut,cre], Jill A. Dever [aut], Frauke Kreuter [aut]
Maintainer: Richard Valliant <valliant@umich.edu>
Diff between PracTools versions 1.2.3 dated 2021-11-03 and 1.2.4 dated 2021-12-20
DESCRIPTION | 10 MD5 | 14 NAMESPACE | 3 R/nAuditAttr.R |only inst/doc/Singlestage-samsize.pdf |binary inst/doc/Varcomps-multistage.pdf |binary man/nAuditAttr.Rd |only vignettes/Singlestage-samsize.html | 765 +++++++++++++++------------------- vignettes/Varcomps-multistage.html | 827 ++++++++++++++++--------------------- 9 files changed, 732 insertions(+), 887 deletions(-)
Title: Create Consort Diagram
Description: To make it easy to create CONSORT diagrams for the transparent reporting of participant allocation in randomized, controlled clinical trials. This is done by creating a standardized disposition data, and using this data as the source for the creation a standard CONSORT diagram. Human effort by supplying text labels on the node can also be achieved.
Author: Alim Dayim [aut, cre] (<https://orcid.org/0000-0001-9998-7463>)
Maintainer: Alim Dayim <ad938@cam.ac.uk>
Diff between consort versions 1.0.0 dated 2021-11-04 and 1.0.1 dated 2021-12-20
DESCRIPTION | 8 - MD5 | 32 ++-- NAMESPACE | 3 NEWS.md | 6 R/add_label_box.R | 40 ++--- R/add_split.R | 10 - R/connect_box.R | 6 R/get_coords.R | 4 R/textbox.R | 4 R/utils.R | 7 inst/doc/consrot_diagram.html | 196 ++++++++++++++++++++++++++- man/plot.consort.Rd | 3 tests/testthat/Rplots.pdf |binary tests/testthat/_snaps/auto/auto_text.png |binary tests/testthat/_snaps/manually/full_text.png |binary tests/testthat/test-auto.R | 2 tests/testthat/test-manually.R | 2 17 files changed, 262 insertions(+), 61 deletions(-)
Title: A Systematic Data Wrangling Idiom
Description: Supports systematic scrutiny, modification, and integration of
data. The function status() counts rows that have missing values in
grouping columns (returned by na() ), have non-unique combinations of
grouping columns (returned by dup() ), and that are not locally sorted
(returned by unsorted() ). Functions enumerate() and itemize() give
sorted unique combinations of columns, with or without occurrence counts,
respectively. Function ignore() drops columns in x that are present in y,
and informative() drops columns in x that are entirely NA; constant() returns
values that are constant, given a key. Data that have defined unique
combinations of grouping values behave more predictably during merge operations.
Author: Tim Bergsma
Maintainer: Tim Bergsma <bergsmat@gmail.com>
Diff between wrangle versions 0.5.2 dated 2019-04-25 and 0.5.5 dated 2021-12-20
DESCRIPTION | 11 +++---- MD5 | 65 +++++++++++++++++++++--------------------- NAMESPACE | 4 +- R/safejoin.R |only R/wrangle.R | 5 +-- man/constant.Rd | 6 ++- man/constant.data.frame.Rd | 6 ++- man/constant.grouped_df.Rd | 6 ++- man/detect.Rd | 7 +++- man/dup.Rd | 4 +- man/dup.grouped_df.Rd | 4 +- man/dupGroups.Rd | 4 +- man/dupGroups.grouped_df.Rd | 4 +- man/enumerate.Rd | 7 +++- man/group_by_all.Rd | 1 man/ignore.Rd | 1 man/informative.Rd | 4 +- man/informative.data.frame.Rd | 4 +- man/itemize.Rd | 7 +++- man/key.Rd | 4 +- man/key.grouped_df.Rd | 4 +- man/na.Rd | 4 +- man/na.grouped_df.Rd | 4 +- man/naGroups.Rd | 4 +- man/naGroups.grouped_df.Rd | 4 +- man/safe_join.Rd |only man/safe_join.data.frame.Rd |only man/sort.grouped_df.Rd | 1 man/static.Rd | 7 +++- man/status.Rd | 4 +- man/status.grouped_df.Rd | 4 +- man/unsorted.Rd | 4 +- man/unsorted.grouped_df.Rd | 4 +- man/weak.Rd | 4 +- man/weak.grouped_df.Rd | 4 +- 35 files changed, 134 insertions(+), 72 deletions(-)
Title: Capture Screenshots of Entire Pages or Parts of Pages in 'Shiny'
Description: Capture screenshots in 'Shiny' applications. Screenshots can either be
of the entire viewable page, or a specific section of the page. The captured
image is automatically downloaded as a PNG image, or it can also be saved on
the server. Powered by the 'html2canvas' JavaScript library.
Author: Dean Attali [aut, cre] (<https://orcid.org/0000-0002-5645-3493>),
Niklas von Hertzen [aut] (html2canvas library),
Eli Grey [aut] (FileSaver library)
Maintainer: Dean Attali <daattali@gmail.com>
Diff between shinyscreenshot versions 0.1.0 dated 2020-10-30 and 0.2.0 dated 2021-12-20
DESCRIPTION | 27 +-- MD5 | 18 +- NEWS.md | 5 R/screenshot.R | 38 ++++- R/utils.R | 7 R/zzz.R |only README.md | 43 ++++-- inst/assets/js/shinyscreenshot/shinyscreenshot.js | 13 + inst/img/hex.png |only man/screenshot.Rd | 157 ++++++++++++---------- man/screenshotButton.Rd | 156 ++++++++++++--------- 11 files changed, 295 insertions(+), 169 deletions(-)
More information about shinyscreenshot at CRAN
Permanent link
Title: Easily Create Pretty Popup Messages (Modals) in 'Shiny'
Description: Easily create pretty popup messages (modals) in 'Shiny'. A modal can
contain text, images, OK/Cancel buttons, an input to get a response from the
user, and many more customizable options.
Author: Dean Attali [aut, cre] (<https://orcid.org/0000-0002-5645-3493>, R
interface),
Tristan Edwards [aut] (sweetalert library),
Zhengjia Wang [ctb]
Maintainer: Dean Attali <daattali@gmail.com>
Diff between shinyalert versions 2.0.0 dated 2020-09-12 and 3.0.0 dated 2021-12-20
shinyalert-2.0.0/shinyalert/build |only shinyalert-2.0.0/shinyalert/inst/doc |only shinyalert-2.0.0/shinyalert/vignettes |only shinyalert-3.0.0/shinyalert/DESCRIPTION | 23 shinyalert-3.0.0/shinyalert/MD5 | 30 - shinyalert-3.0.0/shinyalert/NEWS.md | 11 shinyalert-3.0.0/shinyalert/R/shinyalert.R | 19 shinyalert-3.0.0/shinyalert/R/useShinyalert.R | 68 +- shinyalert-3.0.0/shinyalert/R/utils.R | 39 + shinyalert-3.0.0/shinyalert/README.md | 364 +++++---------- shinyalert-3.0.0/shinyalert/inst/examples/demo/server.R | 2 shinyalert-3.0.0/shinyalert/inst/examples/demo/ui.R | 1 shinyalert-3.0.0/shinyalert/inst/img/hex.png |only shinyalert-3.0.0/shinyalert/inst/www/css/shinyalert.css | 24 shinyalert-3.0.0/shinyalert/inst/www/srcjs/shinyalert.js | 8 shinyalert-3.0.0/shinyalert/man/shinyalert.Rd | 12 shinyalert-3.0.0/shinyalert/man/useShinyalert.Rd | 23 17 files changed, 314 insertions(+), 310 deletions(-)
Title: An Efficient Implementation of Kohonen's Self-Organizing Maps
(SOMs) with Starburst Visualizations
Description: Kohonen's self-organizing maps with a number of distinguishing features:
(1) An efficient, single threaded, stochastic training algorithm inspired by ideas from tensor algebra. Provides significant speedups over traditional single-threaded training algorithms. No special accelerator hardware required (see <doi:10.1007/978-3-030-01057-7_60>).
(2) Automatic centroid detection and visualization using starbursts.
(3) Two models of the data: (a) a self organizing map model, (b) a centroid based clustering model.
(4) A number of easily accessible quality metrics for the self organizing map and the centroid based cluster model (see <doi:10.1007/978-3-319-28518-4_4>).
Author: Lutz Hamel [aut, cre],
Benjamin Ott [aut],
Gregory Breard [aut],
Robert Tatoian [aut],
Michael Eiger [aut],
Vishakh Gopu [aut]
Maintainer: Lutz Hamel <lutzhamel@uri.edu>
Diff between popsom versions 5.2 dated 2021-07-09 and 6.0 dated 2021-12-20
popsom-5.2/popsom/man/fitted.Rd |only popsom-5.2/popsom/man/map.Rd |only popsom-5.2/popsom/man/marginal.Rd |only popsom-5.2/popsom/man/position.Rd |only popsom-5.2/popsom/man/predict.Rd |only popsom-5.2/popsom/man/significance.Rd |only popsom-5.2/popsom/man/starburst.Rd |only popsom-5.2/popsom/man/summary.Rd |only popsom-6.0/popsom/DESCRIPTION | 22 popsom-6.0/popsom/MD5 | 35 popsom-6.0/popsom/NAMESPACE | 17 popsom-6.0/popsom/NEWS.md | 12 popsom-6.0/popsom/R/map-utils.R | 1525 +++++++++++++++--------------- popsom-6.0/popsom/man/map.build.Rd |only popsom-6.0/popsom/man/map.convergence.Rd |only popsom-6.0/popsom/man/map.fitted.Rd |only popsom-6.0/popsom/man/map.marginal.Rd |only popsom-6.0/popsom/man/map.position.Rd |only popsom-6.0/popsom/man/map.predict.Rd |only popsom-6.0/popsom/man/map.significance.Rd |only popsom-6.0/popsom/man/map.starburst.Rd |only popsom-6.0/popsom/man/map.summary.Rd |only popsom-6.0/popsom/tests |only 23 files changed, 840 insertions(+), 771 deletions(-)
Title: Another Approach to Package Installation
Description: The goal of 'pak' is to make package installation faster and
more reliable. In particular, it performs all HTTP operations in parallel,
so metadata resolution and package downloads are fast. Metadata and package
files are cached on the local disk as well. 'pak' has a dependency solver,
so it finds version conflicts before performing the installation. This
version of 'pak' supports CRAN, 'Bioconductor' and 'GitHub' packages as well.
Author: Gábor Csárdi [aut, cre],
Jim Hester [aut],
RStudio [cph]
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>
Diff between pak versions 0.2.0 dated 2021-12-01 and 0.2.1 dated 2021-12-20
pak-0.2.0/pak/README.md |only pak-0.2.1/pak/DESCRIPTION | 7 ++- pak-0.2.1/pak/MD5 | 11 ++--- pak-0.2.1/pak/NEWS.md | 4 ++ pak-0.2.1/pak/R/repo.R | 2 - pak-0.2.1/pak/data/pak_sitrep_data.R | 66 ++++++++++++++++++++++++++--------- pak-0.2.1/pak/man/repo_add.Rd | 2 - 7 files changed, 65 insertions(+), 27 deletions(-)
Title: Model Evaluation and Analysis
Description: Analyses species distribution models and evaluates their performance. It includes functions for performing variation partitioning, calculating several measures of model discrimination and calibration, optimizing prediction thresholds based on a number of criteria, performing multivariate environmental similarity surface (MESS) analysis, and displaying various analytical plots.
Author: Barbosa A.M., Brown J.A., Jimenez-Valverde A., Real R.
Maintainer: A. Marcia Barbosa <ana.marcia.barbosa@gmail.com>
Diff between modEvA versions 2.0 dated 2020-01-21 and 3.0 dated 2021-12-20
modEvA-2.0/modEvA/data/datalist |only modEvA-3.0/modEvA/DESCRIPTION | 14 - modEvA-3.0/modEvA/MD5 | 81 +++--- modEvA-3.0/modEvA/NAMESPACE | 9 modEvA-3.0/modEvA/NEWS | 181 ++++++++++++++ modEvA-3.0/modEvA/R/AUC.R | 91 ++++--- modEvA-3.0/modEvA/R/HLfit.R | 15 - modEvA-3.0/modEvA/R/MESS.R | 7 modEvA-3.0/modEvA/R/MillerCalib.R | 25 +- modEvA-3.0/modEvA/R/RsqGLM.R | 8 modEvA-3.0/modEvA/R/confusionLabel.R |only modEvA-3.0/modEvA/R/evaluate.R | 14 - modEvA-3.0/modEvA/R/getBins.R | 181 +++++++------- modEvA-3.0/modEvA/R/mod2obspred.R |only modEvA-3.0/modEvA/R/multModEv.R | 292 +++++++++++------------ modEvA-3.0/modEvA/R/optiPair.R | 40 +-- modEvA-3.0/modEvA/R/optiThresh.R | 395 ++++++++++++++++---------------- modEvA-3.0/modEvA/R/plotGLM.R | 2 modEvA-3.0/modEvA/R/predDensity.R | 23 + modEvA-3.0/modEvA/R/predPlot.R |only modEvA-3.0/modEvA/R/prevalence.R | 21 + modEvA-3.0/modEvA/R/threshMeasures.R | 171 +++++++------ modEvA-3.0/modEvA/R/varPart.R | 29 +- modEvA-3.0/modEvA/data/rotif.mods.rda |binary modEvA-3.0/modEvA/inst/CITATION | 2 modEvA-3.0/modEvA/man/AUC.Rd | 41 ++- modEvA-3.0/modEvA/man/Dsquared.Rd | 2 modEvA-3.0/modEvA/man/HLfit.Rd | 6 modEvA-3.0/modEvA/man/MESS.Rd | 18 - modEvA-3.0/modEvA/man/MillerCalib.Rd | 8 modEvA-3.0/modEvA/man/RsqGLM.Rd | 20 + modEvA-3.0/modEvA/man/confusionLabel.Rd |only modEvA-3.0/modEvA/man/evenness.Rd | 4 modEvA-3.0/modEvA/man/getBins.Rd | 39 --- modEvA-3.0/modEvA/man/mod2obspred.Rd |only modEvA-3.0/modEvA/man/modEvA-package.Rd | 4 modEvA-3.0/modEvA/man/optiPair.Rd | 23 - modEvA-3.0/modEvA/man/optiThresh.Rd | 6 modEvA-3.0/modEvA/man/plotGLM.Rd | 4 modEvA-3.0/modEvA/man/predDensity.Rd | 14 - modEvA-3.0/modEvA/man/predPlot.Rd |only modEvA-3.0/modEvA/man/prevalence.Rd | 26 +- modEvA-3.0/modEvA/man/range01.Rd | 2 modEvA-3.0/modEvA/man/threshMeasures.Rd | 13 - modEvA-3.0/modEvA/man/varPart.Rd | 21 + 45 files changed, 1078 insertions(+), 774 deletions(-)
Title: Embedding 'FusionCharts Javascript' Library in R
Description: FusionCharts provides awesome and minimalist functions to make beautiful interactive charts <https://www.fusioncharts.com/>.
Author: Alex Yahiaoui Martinez [aut, cre]
Maintainer: Alex Yahiaoui Martinez <yahiaoui-martinez.alex@outlook.com>
Diff between fusionchartsR versions 0.0.2 dated 2021-04-19 and 0.0.3 dated 2021-12-20
fusionchartsR-0.0.2/fusionchartsR/inst/htmlwidgets/lib/fusioncharts-3.14.1/license/FusionChartsLicence.rtf |only fusionchartsR-0.0.3/fusionchartsR/DESCRIPTION | 12 fusionchartsR-0.0.3/fusionchartsR/LICENSE | 1 fusionchartsR-0.0.3/fusionchartsR/MD5 | 54 +- fusionchartsR-0.0.3/fusionchartsR/NAMESPACE | 7 fusionchartsR-0.0.3/fusionchartsR/R/available_charts.R | 6 fusionchartsR-0.0.3/fusionchartsR/R/fusionAxis.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionBackground.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionCanvas.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionCaption.R | 17 fusionchartsR-0.0.3/fusionchartsR/R/fusionCustomAxis.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionCustomLegend.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionDiv.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionLegend.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionLogo.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionMultiPlot.R |only fusionchartsR-0.0.3/fusionchartsR/R/fusionPlot.R | 192 +--------- fusionchartsR-0.0.3/fusionchartsR/R/fusionSubcaption.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/fusionTheme.R | 50 +- fusionchartsR-0.0.3/fusionchartsR/R/fusionTooltip.R | 2 fusionchartsR-0.0.3/fusionchartsR/R/pipe.R | 44 -- fusionchartsR-0.0.3/fusionchartsR/R/runDemo.R |only fusionchartsR-0.0.3/fusionchartsR/README.md | 17 fusionchartsR-0.0.3/fusionchartsR/inst/fusionchartsR_logo.png |only fusionchartsR-0.0.3/fusionchartsR/inst/htmlwidgets/fusionMultiPlot.js |only fusionchartsR-0.0.3/fusionchartsR/inst/htmlwidgets/fusionMultiPlot.yaml |only fusionchartsR-0.0.3/fusionchartsR/inst/htmlwidgets/fusionPlot.js | 13 fusionchartsR-0.0.3/fusionchartsR/inst/htmlwidgets/lib/fusioncharts-3.14.1/license/FusionChartsLicence |only fusionchartsR-0.0.3/fusionchartsR/man/fusionCaption.Rd | 15 fusionchartsR-0.0.3/fusionchartsR/man/fusionMultiPlot-shiny.Rd |only fusionchartsR-0.0.3/fusionchartsR/man/fusionMultiPlot.Rd |only fusionchartsR-0.0.3/fusionchartsR/man/fusionPlot.Rd | 22 - fusionchartsR-0.0.3/fusionchartsR/man/runDemo.Rd |only 33 files changed, 135 insertions(+), 335 deletions(-)
Title: Variance Function Program
Description: Variance function estimation for models proposed by W. Sadler in his variance function program
('VFP', <http://www.aacb.asn.au/resources/useful-tools/variance-function-program-v14>). Here, the idea is
to fit multiple variance functions to a data set and consequently assess which function reflects
the relationship 'Var ~ Mean' best. For 'in-vitro diagnostic' ('IVD') assays modeling this relationship
is of great importance when individual test-results are used for defining follow-up treatment of patients.
Author: Andre Schuetzenmeister [cre, aut],
Florian Dufey [aut],
Andrea Geistanger [ctb]
Maintainer: Andre Schuetzenmeister <andre.schuetzenmeister@roche.com>
Diff between VFP versions 1.3.1 dated 2021-10-14 and 1.4 dated 2021-12-20
VFP-1.3.1/VFP/R/vfp.R |only VFP-1.3.1/VFP/inst/ChangLog.txt |only VFP-1.3.1/VFP/inst/UnitTests/runit.tests.R |only VFP-1.4/VFP/DESCRIPTION | 8 VFP-1.4/VFP/MD5 | 120 +++++----- VFP-1.4/VFP/R/fit.R |only VFP-1.4/VFP/R/methods.R |only VFP-1.4/VFP/R/plot.R |only VFP-1.4/VFP/R/utils.R |only VFP-1.4/VFP/build/vignette.rds |binary VFP-1.4/VFP/inst/ChangeLog.txt |only VFP-1.4/VFP/inst/UnitTests/data |only VFP-1.4/VFP/inst/UnitTests/runit.plots.R |only VFP-1.4/VFP/inst/UnitTests/runit.tests_1.R |only VFP-1.4/VFP/inst/UnitTests/runit.tests_2.R |only VFP-1.4/VFP/inst/doc/VFP_package_vignette.html | 105 +++----- VFP-1.4/VFP/man/Signif.Rd | 2 VFP-1.4/VFP/man/VFP-Package.Rd | 4 VFP-1.4/VFP/man/addGrid.Rd | 2 VFP-1.4/VFP/man/as.rgb.Rd | 2 VFP-1.4/VFP/man/bt.coef.Rd | 2 VFP-1.4/VFP/man/coef.VFP.Rd | 2 VFP-1.4/VFP/man/conditionHandler.Rd | 2 VFP-1.4/VFP/man/deriveCx.Rd | 22 - VFP-1.4/VFP/man/fit.EP17.Rd | 8 VFP-1.4/VFP/man/fit.vfp.Rd | 41 ++- VFP-1.4/VFP/man/getMat.VCA.Rd | 2 VFP-1.4/VFP/man/legend.rm.Rd | 2 VFP-1.4/VFP/man/plot.VFP.Rd | 6 VFP-1.4/VFP/man/powfun2simple.Rd | 2 VFP-1.4/VFP/man/powfun3.Rd | 2 VFP-1.4/VFP/man/powfun3simple.Rd | 2 VFP-1.4/VFP/man/powfun4.Rd | 2 VFP-1.4/VFP/man/powfun4simple.Rd | 2 VFP-1.4/VFP/man/powfun5.Rd | 2 VFP-1.4/VFP/man/powfun5simple.Rd | 2 VFP-1.4/VFP/man/powfun6.Rd | 2 VFP-1.4/VFP/man/powfun6simple.Rd | 2 VFP-1.4/VFP/man/powfun7.Rd | 2 VFP-1.4/VFP/man/powfun7simple.Rd | 2 VFP-1.4/VFP/man/powfun8.Rd | 2 VFP-1.4/VFP/man/powfun8simple.Rd | 2 VFP-1.4/VFP/man/powfun9simple.Rd | 2 VFP-1.4/VFP/man/precisionPlot.Rd | 2 VFP-1.4/VFP/man/predict.VFP.Rd | 15 - VFP-1.4/VFP/man/predict.modelEP17.Rd | 2 VFP-1.4/VFP/man/predictMean.Rd | 2 VFP-1.4/VFP/man/print.VFP.Rd | 2 VFP-1.4/VFP/man/summary.VFP.Rd | 2 VFP-1.4/VFP/man/t.coef.Rd | 2 VFP-1.4/VFP/vignettes/figures/CLSI_EP05_Example_2-1.png |binary VFP-1.4/VFP/vignettes/figures/Precision_Profile-1.png |binary VFP-1.4/VFP/vignettes/figures/beautified_with_prediction_1-1.png |binary VFP-1.4/VFP/vignettes/figures/beautified_with_prediction_2-1.png |binary VFP-1.4/VFP/vignettes/figures/beautified_with_prediction_3-1.png |binary VFP-1.4/VFP/vignettes/figures/deriveCx_examples_2-1.png |binary VFP-1.4/VFP/vignettes/figures/deriveCx_examples_3-1.png |binary VFP-1.4/VFP/vignettes/figures/deriveCx_examples_4-1.png |binary VFP-1.4/VFP/vignettes/figures/plot_VFP_model_CV-1.png |binary VFP-1.4/VFP/vignettes/figures/plot_VFP_model_VC-1.png |binary 60 files changed, 202 insertions(+), 183 deletions(-)
Title: Normalised Prediction Distribution Errors for Nonlinear
Mixed-Effect Models
Description: Provides routines to compute normalised prediction distribution errors, a metric designed to evaluate non-linear mixed effect models such as those used in pharmacokinetics and pharmacodynamics.
Author: Emmanuelle Comets [aut, cre] (<https://orcid.org/0000-0002-9150-9886>),
Karl Brendel [ctb],
Thi Huyen Tram Nguyen [ctb],
Marc Cerou [ctb],
Romain Leroux [ctb],
France Mentre [ctb]
Maintainer: Emmanuelle Comets <emmanuelle.comets@inserm.fr>
Diff between npde versions 3.1 dated 2021-04-07 and 3.2 dated 2021-12-20
npde-3.1/npde/tests |only npde-3.2/npde/CHANGES | 8 + npde-3.2/npde/DESCRIPTION | 21 ++- npde-3.2/npde/MD5 | 55 +++------ npde-3.2/npde/NAMESPACE | 1 npde-3.2/npde/R/NpdeData-methods.R | 167 ++++++++++++----------------- npde-3.2/npde/R/NpdeData.R | 25 +--- npde-3.2/npde/R/NpdeSimData.R | 2 npde-3.2/npde/R/aaa_generics.R | 17 +- npde-3.2/npde/R/mainNpde.R | 4 npde-3.2/npde/R/npde.R | 9 + npde-3.2/npde/R/plotNpde-auxScatterPlot.R | 11 + npde-3.2/npde/R/plotNpde-methods.R | 5 npde-3.2/npde/R/plotNpde-plotFunctions.R | 12 +- npde-3.2/npde/R/plotNpde-scatterplot.R | 4 npde-3.2/npde/inst |only npde-3.2/npde/man/npde.cens.method.Rd | 6 - npde-3.2/npde/man/npde.plot.default.Rd | 4 npde-3.2/npde/man/npde.plot.scatterplot.Rd | 3 npde-3.2/npde/man/npdeData.Rd | 5 npde-3.2/npde/man/npdeSimData.Rd | 16 ++ npde-3.2/npde/man/plot.NpdeObject.Rd | 2 npde-3.2/npde/man/read.Rd | 40 +----- 23 files changed, 200 insertions(+), 217 deletions(-)
Title: Transfer of Hydrograph from Gauged to Ungauged Catchments
Description: A geomorphology-based hydrological modelling for transferring
streamflow measurements from gauged to ungauged catchments. Inverse
modelling enables to estimate net rainfall from streamflow measurements
following Boudhraâ et al. (2018) <doi:10.1080/02626667.2018.1425801>.
Resulting net rainfall is then estimated on the ungauged catchments
by spatial interpolation in order to finally simulate streamflow
following de Lavenne et al. (2016) <doi:10.1002/2016WR018716>.
Author: Alban de Lavenne [aut, cre] (<https://orcid.org/0000-0002-9448-3490>),
Christophe Cudennec [ths] (<https://orcid.org/0000-0002-1707-8926>),
Tom Loree [ctb],
Hervé Squividant [ctb]
Maintainer: Alban de Lavenne <alban.delavenne@inrae.fr>
Diff between transfR versions 0.1.0 dated 2021-09-08 and 0.1.1 dated 2021-12-20
DESCRIPTION | 10 +++++----- MD5 | 37 +++++++++++++++++++------------------ R/convolution.R | 8 +++++--- R/hdist.R | 5 ++--- R/inversion.R | 22 ++++++++++++++-------- R/lagtime.R | 2 +- R/mixr.R | 8 +++++++- R/plot.R | 22 ++++++++++++++++------ R/uh.R | 10 +++++++--- README.md |only build/partial.rdb |binary build/vignette.rds |binary data/Blavet.rda |binary data/Oudon.rda |binary inst/doc/V01_get_started.html | 12 ++++++------ man/inversion.Rd | 8 +++++++- man/lagtime.Rd | 2 +- man/plot.Rd | 9 +++++++++ man/transfR.Rd | 16 +++++++++------- man/uh.Rd | 4 ++-- 20 files changed, 110 insertions(+), 65 deletions(-)
Title: Parse Messy Geographic Coordinates
Description: Parse messy geographic coordinates from various character formats
to decimal degree numeric values. Parse coordinates into
their parts (degree, minutes, seconds); calculate hemisphere
from coordinates; pull out individually degrees,
minutes, or seconds; add and subtract degrees, minutes,
and seconds. C++ code herein originally inspired from code
written by Jeffrey D. Bogan, but then completely re-written.
Author: Scott Chamberlain [aut] (<https://orcid.org/0000-0003-1444-9135>),
Alban Sagouis [aut, cre] (<https://orcid.org/0000-0002-3827-1063>),
Alec L. Robitaille [ctb],
Maëlle Salmon [ctb] (<https://orcid.org/0000-0002-2815-0399>),
Hiroaki Yutani [ctb],
Jeffrey Bogan [ctb] (C++ code originally from Jeffrey Bogan, but
completely re-written),
Julien Brun [rev] (Julien Brun reviewed the package, see
https://github.com/ropensci/onboarding/issues/341),
Maria Munafó [rev] (Maria Munafó reviewed the package, see
https://github.com/ropensci/onboarding/issues/341),
rOpenSci [fnd] (https://ropensci.org)
Maintainer: Alban Sagouis <sagouis@pm.me>
Diff between parzer versions 0.4.0 dated 2021-02-16 and 0.4.1 dated 2021-12-20
parzer-0.4.0/parzer/inst/ignore |only parzer-0.4.1/parzer/DESCRIPTION | 37 parzer-0.4.1/parzer/LICENSE | 4 parzer-0.4.1/parzer/MD5 | 82 parzer-0.4.1/parzer/NAMESPACE | 44 parzer-0.4.1/parzer/NEWS.md | 94 parzer-0.4.1/parzer/R/RcppExports.R | 70 parzer-0.4.1/parzer/R/dms-fxns.R | 273 - parzer-0.4.1/parzer/R/parse_hemisphere.R | 82 parzer-0.4.1/parzer/R/parse_lat.R | 122 parzer-0.4.1/parzer/R/parse_lat_lon.R | 58 parzer-0.4.1/parzer/R/parse_llstr.R | 69 parzer-0.4.1/parzer/R/parse_lon.R | 130 parzer-0.4.1/parzer/R/parse_parts.R | 98 parzer-0.4.1/parzer/R/parzer-package.R | 22 parzer-0.4.1/parzer/R/zzz.R | 82 parzer-0.4.1/parzer/README.md | 177 - parzer-0.4.1/parzer/build/vignette.rds |binary parzer-0.4.1/parzer/inst/doc/parzer.Rmd | 412 +- parzer-0.4.1/parzer/inst/doc/parzer.html | 2254 ++----------- parzer-0.4.1/parzer/man/dms.Rd | 187 - parzer-0.4.1/parzer/man/parse_hemisphere.Rd | 100 parzer-0.4.1/parzer/man/parse_lat.Rd | 144 parzer-0.4.1/parzer/man/parse_llstr.Rd | 71 parzer-0.4.1/parzer/man/parse_lon.Rd | 150 parzer-0.4.1/parzer/man/parse_lon_lat.Rd | 72 parzer-0.4.1/parzer/man/parse_parts.Rd | 103 parzer-0.4.1/parzer/man/parzer-package.Rd | 28 parzer-0.4.1/parzer/src/RcppExports.cpp | 5 parzer-0.4.1/parzer/tests/testthat.R | 4 parzer-0.4.1/parzer/tests/testthat/test-dms.R | 326 - parzer-0.4.1/parzer/tests/testthat/test-mbcs-locale.R | 95 parzer-0.4.1/parzer/tests/testthat/test-parse_hemisphere.R | 74 parzer-0.4.1/parzer/tests/testthat/test-parse_lat.R | 188 - parzer-0.4.1/parzer/tests/testthat/test-parse_lat_lon.R | 50 parzer-0.4.1/parzer/tests/testthat/test-parse_llstr.R | 56 parzer-0.4.1/parzer/tests/testthat/test-parse_lon.R | 184 - parzer-0.4.1/parzer/tests/testthat/test-parse_parts.R | 92 parzer-0.4.1/parzer/tests/testthat/test-split_llstr.R | 108 parzer-0.4.1/parzer/tests/testthat/test-utils.R | 38 parzer-0.4.1/parzer/vignettes/parzer.Rmd | 412 +- parzer-0.4.1/parzer/vignettes/parzer.Rmd.og | 280 - 42 files changed, 2837 insertions(+), 4040 deletions(-)
Title: Visualise and Explore the Deep Dependencies of R Packages
Description: Provides tools for exploration of R package dependencies.
The main deepdep() function allows to acquire deep dependencies of any package and plot them in an elegant way.
It also adds some popularity measures for the packages e.g. in the form of download count through the 'cranlogs' package.
Uses the CRAN metadata database <http://crandb.r-pkg.org> and Bioconductor metadata <http://bioconductor.org>.
Other data acquire functions are: get_dependencies(), get_downloads() and get_description().
The deepdep_shiny() function runs shiny application that helps to produce a nice 'deepdep' plot.
Author: Dominik Rafacz [aut, cre] (<https://orcid.org/0000-0003-0925-1909>),
Hubert Baniecki [aut],
Szymon Maksymiuk [aut],
Laura Bakala [aut],
Dirk Eddelbuettel [ctb]
Maintainer: Dominik Rafacz <dominikrafacz@gmail.com>
Diff between deepdep versions 0.4.0 dated 2021-12-17 and 0.4.1 dated 2021-12-20
deepdep-0.4.0/deepdep/tests/fixtures/deepdep-3.yml |only deepdep-0.4.0/deepdep/tests/fixtures/plot-1.yml |only deepdep-0.4.0/deepdep/tests/fixtures/plot-2.yml |only deepdep-0.4.1/deepdep/DESCRIPTION | 6 deepdep-0.4.1/deepdep/MD5 | 54 - deepdep-0.4.1/deepdep/NEWS.md | 88 +- deepdep-0.4.1/deepdep/R/deepdep_declutter.R |only deepdep-0.4.1/deepdep/R/plot_deepdep.R | 156 ++-- deepdep-0.4.1/deepdep/R/utils.R |only deepdep-0.4.1/deepdep/inst/doc/deepdep-comparison.Rmd | 3 deepdep-0.4.1/deepdep/inst/doc/deepdep-comparison.html | 25 deepdep-0.4.1/deepdep/inst/doc/deepdep-package.Rmd | 65 +- deepdep-0.4.1/deepdep/inst/doc/deepdep-package.html | 85 +- deepdep-0.4.1/deepdep/tests/fixtures/dd-declutr-R6.yml |only deepdep-0.4.1/deepdep/tests/fixtures/deepdep-1.json | 2 deepdep-0.4.1/deepdep/tests/fixtures/deepdep-2.yml | 6 deepdep-0.4.1/deepdep/tests/fixtures/plot-dd-R6.yml |only deepdep-0.4.1/deepdep/tests/fixtures/plot-dd-datatable.yml |only deepdep-0.4.1/deepdep/tests/fixtures/plot-dd-rlang.yml |only deepdep-0.4.1/deepdep/tests/fixtures/plot-dd-shiny-2.yml |only deepdep-0.4.1/deepdep/tests/fixtures/plot-dnl-1.yml | 117 --- deepdep-0.4.1/deepdep/tests/testthat/setup-deepdep.R | 13 deepdep-0.4.1/deepdep/tests/testthat/setup-vcr.R |only deepdep-0.4.1/deepdep/tests/testthat/test-deepdep_declutter.R |only deepdep-0.4.1/deepdep/tests/testthat/test-plot.R | 325 ++++++++-- deepdep-0.4.1/deepdep/tests/testthat/test-plot_downloads.R | 8 deepdep-0.4.1/deepdep/vignettes/deepdep-comparison.Rmd | 3 deepdep-0.4.1/deepdep/vignettes/deepdep-package.Rmd | 65 +- deepdep-0.4.1/deepdep/vignettes/plot_dependencies1-1.png |binary deepdep-0.4.1/deepdep/vignettes/plot_dependencies1-2.png |binary deepdep-0.4.1/deepdep/vignettes/plot_dependencies2-1.png |binary deepdep-0.4.1/deepdep/vignettes/plot_dependencies3-1.png |binary deepdep-0.4.1/deepdep/vignettes/plot_dependencies4-1.png |binary deepdep-0.4.1/deepdep/vignettes/plot_dependencies5-1.png |binary 34 files changed, 573 insertions(+), 448 deletions(-)
Title: Tools to Read and Convert Wearables Data
Description: Package to read Empatica E4 data, perform several transformations, perform signal
processing and analyses, including batch analyses.
Author: Peter de Looff [aut, cre],
Remko Duursma [aut],
Saskia Koldijk [aut],
Kees de Schepper [aut],
Matthijs Noordzij [ctb],
Natasha Jaques [ctb],
Sara Taylor [ctb]
Maintainer: Peter de Looff <peterdelooff@gmail.com>
Diff between wearables versions 0.6.2 dated 2021-06-30 and 0.8.1 dated 2021-12-20
DESCRIPTION | 14 ++--- MD5 | 20 ++++--- NAMESPACE | 12 ++++ NEWS.md | 8 ++- R/cut_e4_data_intervals.R |only R/peak_detection.R | 57 ++++++++++++++-------- R/read_and_proces_e4.R | 112 ++++++++++++++++++++++++++++++++++++++++++-- R/read_e4.R | 41 ++++++++++++---- R/utils.R | 11 ++++ man/char_clock_systime.Rd |only man/e4_filecut_intervals.Rd |only man/filter_createdir_zip.Rd |only man/find_peaks.Rd | 4 - 13 files changed, 227 insertions(+), 52 deletions(-)
Title: Statistical Tools for the Analysis of Multi Environment
Agronomic Trials
Description: Data from multi environment agronomic trials, which are often
carried out by plant breeders, can be analyzed with the tools offered by this
package such as the Additive Main effects and Multiplicative Interaction model
or 'AMMI' ('Gauch' 1992, ISBN:9780444892409)
and the Site Regression model or 'SREG' ('Cornelius' 1996,
<doi:10.1201/9780367802226>). Since these methods present a poor performance
under the presence of outliers and missing values, this package includes
robust versions of the 'AMMI' model ('Rodrigues' 2016,
<doi:10.1093/bioinformatics/btv533>), and also imputation techniques
specifically developed for this kind of data ('Arciniegas-Alarcón' 2014,
<doi:10.2478/bile-2014-0006>).
Author: Julia Angelini [aut, cre] (<https://orcid.org/0000-0002-5815-1771>),
Marcos Prunello [aut] (<https://orcid.org/0000-0002-9611-527X>),
Gerardo Cervigni [aut]
Maintainer: Julia Angelini <jangelini_93@hotmail.com>
Diff between geneticae versions 0.1.0 dated 2021-09-16 and 0.2.0 dated 2021-12-20
geneticae-0.1.0/geneticae/data/yan.winterwheat.RData |only geneticae-0.1.0/geneticae/man/yan.winterwheat.Rd |only geneticae-0.2.0/geneticae/DESCRIPTION | 18 geneticae-0.2.0/geneticae/MD5 | 59 - geneticae-0.2.0/geneticae/NEWS.md | 13 geneticae-0.2.0/geneticae/R/GGE_Model.R | 11 geneticae-0.2.0/geneticae/R/GGE_Plot.R | 19 geneticae-0.2.0/geneticae/R/dataDoc.R | 22 geneticae-0.2.0/geneticae/R/impute.R | 1 geneticae-0.2.0/geneticae/R/rAMMI.R | 5 geneticae-0.2.0/geneticae/README.md | 47 - geneticae-0.2.0/geneticae/build/partial.rdb |binary geneticae-0.2.0/geneticae/build/vignette.rds |binary geneticae-0.2.0/geneticae/inst/doc/a-tutorial.R | 16 geneticae-0.2.0/geneticae/inst/doc/a-tutorial.Rmd | 40 geneticae-0.2.0/geneticae/inst/doc/a-tutorial.html | 402 ++-------- geneticae-0.2.0/geneticae/inst/doc/b-shiny.R | 12 geneticae-0.2.0/geneticae/inst/doc/b-shiny.Rmd | 31 geneticae-0.2.0/geneticae/inst/doc/b-shiny.html | 236 ----- geneticae-0.2.0/geneticae/man/GGEPlot.Rd | 1 geneticae-0.2.0/geneticae/man/GGEmodel.Rd | 9 geneticae-0.2.0/geneticae/man/figures/README-unnamed-chunk-3-1.png |binary geneticae-0.2.0/geneticae/man/figures/README-unnamed-chunk-4-1.png |binary geneticae-0.2.0/geneticae/man/imputation.Rd | 1 geneticae-0.2.0/geneticae/man/rAMMI.Rd | 1 geneticae-0.2.0/geneticae/tests/testthat/test-GGE_Model.R | 76 - geneticae-0.2.0/geneticae/tests/testthat/test-GGE_Plot.R | 1 geneticae-0.2.0/geneticae/tests/testthat/test-impute.R | 66 - geneticae-0.2.0/geneticae/tests/testthat/test-r_AMMI.R | 1 geneticae-0.2.0/geneticae/vignettes/a-tutorial.Rmd | 40 geneticae-0.2.0/geneticae/vignettes/b-shiny.Rmd | 31 geneticae-0.2.0/geneticae/vignettes/selectE_GGE.png |only 32 files changed, 412 insertions(+), 747 deletions(-)
Title: Empirical Bayes Multi-State Cox Model
Description: Implements an empirical Bayes, multi-state Cox model for survival analysis. Run "?'ebmstate-package'" for details. See also Schall (1991) <doi:10.1093/biomet/78.4.719>.
Author: Rui Costa [aut, cre],
Moritz Gerstung [aut],
Terry M Therneau [ctb] (author of 'survival', a package from which code
parts were copied),
Thomas Lumley [ctb] (contributor to 'survival', a package from which
code parts were copied),
Hein Putter [ctb] (co-author of 'mstate', a package from which code
parts were copied),
Liesbeth de Wreede [ctb] (co-author of 'mstate', a package from which
code parts were copied),
Marta Fiocco [ctb] (co-author of 'mstate', a package from which code
parts were copied),
Ronald Geskus [ctb] (contributor to 'mstate', a package from which code
parts were copied)
Maintainer: Rui Costa <rui.costa@ebi.ac.uk>
Diff between ebmstate versions 0.1.2 dated 2021-01-05 and 0.1.3 dated 2021-12-20
ebmstate-0.1.2/ebmstate/man/convolute_Markov.Rd |only ebmstate-0.1.2/ebmstate/man/convolute_semiMarkov.Rd |only ebmstate-0.1.2/ebmstate/man/probtrans_by_convolution_Markov.Rd |only ebmstate-0.1.2/ebmstate/man/probtrans_by_convolution_semiMarkov.Rd |only ebmstate-0.1.3/ebmstate/DESCRIPTION | 9 - ebmstate-0.1.3/ebmstate/MD5 | 40 +++-- ebmstate-0.1.3/ebmstate/NAMESPACE | 1 ebmstate-0.1.3/ebmstate/R/RcppExports.R | 20 +- ebmstate-0.1.3/ebmstate/R/bootstrap_and_leave_one_out.R | 16 +- ebmstate-0.1.3/ebmstate/R/probtrans_ebmstate.R | 67 ++++------ ebmstate-0.1.3/ebmstate/R/probtrans_fft.R |only ebmstate-0.1.3/ebmstate/man/boot_ebmstate.Rd | 2 ebmstate-0.1.3/ebmstate/man/boot_probtrans.Rd | 2 ebmstate-0.1.3/ebmstate/man/convolute_clockforward.Rd |only ebmstate-0.1.3/ebmstate/man/convolute_clockreset.Rd |only ebmstate-0.1.3/ebmstate/man/joint_cum_hazard_function.Rd | 8 - ebmstate-0.1.3/ebmstate/man/loo_ebmstate.Rd | 2 ebmstate-0.1.3/ebmstate/man/probtrans_by_convolution.Rd | 10 - ebmstate-0.1.3/ebmstate/man/probtrans_by_convolution_clockforward.Rd |only ebmstate-0.1.3/ebmstate/man/probtrans_by_convolution_clockreset.Rd |only ebmstate-0.1.3/ebmstate/man/probtrans_ebmstate.Rd | 11 - ebmstate-0.1.3/ebmstate/man/probtrans_fft.Rd |only ebmstate-0.1.3/ebmstate/man/successful_transitions.Rd | 6 ebmstate-0.1.3/ebmstate/src/RcppExports.cpp | 21 +-- ebmstate-0.1.3/ebmstate/src/init.c | 12 - ebmstate-0.1.3/ebmstate/src/rcpp_functions.cpp | 16 +- 26 files changed, 124 insertions(+), 119 deletions(-)
Title: GGE Biplots with 'ggplot2'
Description: Genotype plus genotype-by-environment (GGE) biplots rendered using 'ggplot2'. Provides a command line interface to all of the functionality contained within the archived package 'GGEBiplotGUI'.
Author: Sam Dumble [aut, cre],
Elisa Frutos Bernal [ctb],
Purificacion Galindo Villardon [ctb]
Maintainer: Sam Dumble <s.dumble@stats4sd.org>
Diff between GGEBiplots versions 0.1.1 dated 2017-07-24 and 0.1.2 dated 2021-12-20
ChangeLog |only DESCRIPTION | 13 - MD5 | 54 +++--- R/CompareGens.R | 5 R/DiscRep.R | 5 R/EnvRelationship.R | 3 R/ExamineEnv.R | 5 R/ExamineGen.R | 7 R/GGEModel.R | 77 ++++----- R/GGEPlot.R | 379 +++++++++++++++++++++++++------------------------ R/MeanStability.R | 7 R/RankEnv.R | 5 R/RankGen.R | 7 R/WhichWon.R | 5 R/globals.R | 2 R/stattable.R | 4 build |only data |only man/CompareGens.Rd | 1 man/DiscRep.Rd | 1 man/EnvRelationship.Rd | 1 man/ExamineEnv.Rd | 1 man/ExamineGen.Rd | 1 man/GGEModel.Rd | 35 ++-- man/GGEPlot.Rd | 70 ++++----- man/MeanStability.Rd | 1 man/Ontario.Rd |only man/RankEnv.Rd | 1 man/RankGen.Rd | 5 man/WhichWon.Rd | 1 30 files changed, 353 insertions(+), 343 deletions(-)
Title: Conducting the Peak Fitting Based on the EM Algorithm
Description: The peak fitting of spectral data is performed by using the frame work of EM algorithm. We adapted the EM algorithm for the peak fitting of spectral data set by considering the weight of the intensity corresponding to the measurement energy steps (Matsumura, T., Nagamura, N., Akaho, S., Nagata, K., & Ando, Y. (2019 and 2021) <doi:10.1080/14686996.2019.1620123> and <doi:10.1080/27660400.2021.1899449>. The package efficiently estimates the parameters of Gaussian mixture model during iterative calculation between E-step and M-step, and the parameters are converged to a local optimal solution. This package can support the investigation of peak shift with two advantages: (1) a large amount of data can be processed at high speed; and (2) stable and automatic calculation can be easily performed.
Author: Tarojiro Matsumura [aut, cre]
Maintainer: Tarojiro Matsumura <matsumura-tarojiro@aist.go.jp>
Diff between EMpeaksR versions 0.1.0 dated 2021-04-20 and 0.2.0 dated 2021-12-20
DESCRIPTION | 10 ++++----- LICENSE | 6 +---- MD5 | 24 ++++++++++++++++------ NEWS.md | 9 +++++++- R/DSGMM_Peakfitting.R |only R/DSGMM_graph_fittingcurve.R |only R/GMM_graph_fittingcurve.R | 6 ++--- R/LMM_Peakfitting.R |only R/LMM_graph_fittingcurve.R |only R/PVMM_Peakfitting.R |only R/PVMM_graph_fittingcurve.R |only README.md | 46 +++++++++++++++++++++++++++++++++++++++++++ inst/WORDLIST | 14 ++++++++++++- man/DSGMM.Rd |only man/DSGMM_fitting_graph.Rd |only man/LMM.Rd |only man/LMM_fitting_graph.Rd |only man/PVMM.Rd |only man/PVMM_fitting_graph.Rd |only 19 files changed, 95 insertions(+), 20 deletions(-)
Title: Find Tools Needed to Build R Packages
Description: Provides functions used to build R packages. Locates compilers
needed to build R packages on various platforms and ensures the PATH is
configured appropriately so R can use them.
Author: Hadley Wickham [aut],
Jim Hester [aut],
Gábor Csárdi [aut, cre],
RStudio [cph]
Maintainer: Gábor Csárdi <csardi.gabor@gmail.com>
Diff between pkgbuild versions 1.3.0 dated 2021-12-09 and 1.3.1 dated 2021-12-20
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 11 +++++++++++ R/rtools-metadata.R | 2 +- R/rtools.R | 8 +++++--- 5 files changed, 24 insertions(+), 11 deletions(-)
Title: Missing Person Identification Tools
Description: Open-source software for computing Likelihood ratios thresholds and error rates in DNA kinship testing. Marsico FL. et al (2021) <doi:10.1016/j.fsigen.2021.102519>.
Author: Franco Marsico [aut, cre] (<https://orcid.org/0000-0002-0740-5516>)
Maintainer: Franco Marsico <franco.lmarsico@gmail.com>
Diff between mispitools versions 0.1.1 dated 2021-12-10 and 0.1.3 dated 2021-12-20
mispitools-0.1.1/mispitools/R/Abuelas_cases.R |only mispitools-0.1.1/mispitools/data |only mispitools-0.1.1/mispitools/man/Abuelas_cases.Rd |only mispitools-0.1.3/mispitools/DESCRIPTION | 10 +++---- mispitools-0.1.3/mispitools/MD5 | 13 ++++----- mispitools-0.1.3/mispitools/NAMESPACE | 5 ++- mispitools-0.1.3/mispitools/R/LRprelim.R |only mispitools-0.1.3/mispitools/R/makePrelim.R | 9 +++--- mispitools-0.1.3/mispitools/README.md | 31 +++++++++++++++++++++++ mispitools-0.1.3/mispitools/man/LRprelim.Rd |only 10 files changed, 51 insertions(+), 17 deletions(-)
Title: Diagnostic Tests for Logistic Regression Models
Description: Diagnostic tests and plots for GLMs (generalized linear models)
with binomial/ binary outcomes, particularly logistic regression.
Author: Chris Dardis
Maintainer: Chris Dardis <christopherdardis@gmail.com>
Diff between LogisticDx versions 0.2 dated 2015-07-08 and 0.3 dated 2021-12-20
LogisticDx-0.2/LogisticDx/man/logisticDx2-package.Rd |only LogisticDx-0.3/LogisticDx/DESCRIPTION | 11 +- LogisticDx-0.3/LogisticDx/MD5 | 91 +++++++++---------- LogisticDx-0.3/LogisticDx/NAMESPACE | 2 LogisticDx-0.3/LogisticDx/NEWS | 1 LogisticDx-0.3/LogisticDx/R/LogisticDx_package.R | 10 +- LogisticDx-0.3/LogisticDx/R/OR.R | 2 LogisticDx-0.3/LogisticDx/R/ageChd.R | 5 - LogisticDx-0.3/LogisticDx/R/bbdm.R | 17 +-- LogisticDx-0.3/LogisticDx/R/genBinom.R | 19 ++- LogisticDx-0.3/LogisticDx/R/gof.R | 35 ++----- LogisticDx-0.3/LogisticDx/R/icu.R | 10 -- LogisticDx-0.3/LogisticDx/R/lbw.R | 2 LogisticDx-0.3/LogisticDx/R/llbw.R | 3 LogisticDx-0.3/LogisticDx/R/mes.R | 8 - LogisticDx-0.3/LogisticDx/R/mlbw.R | 3 LogisticDx-0.3/LogisticDx/R/nhanes3.R | 16 +-- LogisticDx-0.3/LogisticDx/R/pcs.R | 11 +- LogisticDx-0.3/LogisticDx/R/plotGlm.R | 2 LogisticDx-0.3/LogisticDx/R/printSigGlm.R | 4 LogisticDx-0.3/LogisticDx/R/ss.R | 32 ++---- LogisticDx-0.3/LogisticDx/R/uis.R | 18 +-- LogisticDx-0.3/LogisticDx/README.md | 3 LogisticDx-0.3/LogisticDx/build/partial.rdb |only LogisticDx-0.3/LogisticDx/build/vignette.rds |binary LogisticDx-0.3/LogisticDx/inst/doc/plotGlm.R | 8 - LogisticDx-0.3/LogisticDx/inst/doc/plotGlm.Rnw | 10 +- LogisticDx-0.3/LogisticDx/inst/doc/plotGlm.pdf |binary LogisticDx-0.3/LogisticDx/man/OR.Rd | 19 ++- LogisticDx-0.3/LogisticDx/man/ageChd.Rd | 15 +-- LogisticDx-0.3/LogisticDx/man/bbdm.Rd | 27 ++--- LogisticDx-0.3/LogisticDx/man/dx.Rd | 8 - LogisticDx-0.3/LogisticDx/man/genBinom.Rd | 42 ++++++-- LogisticDx-0.3/LogisticDx/man/gof.Rd | 62 +++++------- LogisticDx-0.3/LogisticDx/man/icu.Rd | 19 +-- LogisticDx-0.3/LogisticDx/man/lbw.Rd | 12 +- LogisticDx-0.3/LogisticDx/man/llbw.Rd | 13 +- LogisticDx-0.3/LogisticDx/man/logisticDx-package.Rd |only LogisticDx-0.3/LogisticDx/man/mes.Rd | 18 +-- LogisticDx-0.3/LogisticDx/man/mlbw.Rd | 13 +- LogisticDx-0.3/LogisticDx/man/nhanes3.Rd | 27 +++-- LogisticDx-0.3/LogisticDx/man/pcs.Rd | 21 ++-- LogisticDx-0.3/LogisticDx/man/plotGlm.Rd | 38 +++++-- LogisticDx-0.3/LogisticDx/man/sig.Rd | 6 - LogisticDx-0.3/LogisticDx/man/ss.Rd | 66 ++++++------- LogisticDx-0.3/LogisticDx/man/uis.Rd | 28 ++--- LogisticDx-0.3/LogisticDx/vignettes/auto/plotGlm.el | 44 ++++----- LogisticDx-0.3/LogisticDx/vignettes/plotGlm.Rnw | 10 +- 48 files changed, 417 insertions(+), 394 deletions(-)
Title: Cross-Covariance Isolate Detect: a New Change-Point Method for
Estimating Dynamic Functional Connectivity
Description: Provides efficient implementation of the Cross-Covariance
Isolate Detect (CCID) methodology for the estimation of the number
and location of multiple change-points in the second-order
(cross-covariance or network) structure of multivariate, possibly
high-dimensional time series. The method is motivated by the detection
of change points in functional connectivity networks for functional
magnetic resonance imaging (fMRI), electroencephalography (EEG),
magentoencephalography (MEG) and electrocorticography (ECoG) data. The
main routines in the package have been extensively tested on fMRI data.
For details on the CCID methodology, please see Anastasiou et
al (2022), Cross-covariance isolate detect: A new change-point method for
estimating dynamic functional connectivity. Medical Image Analysis, Volume
75.
Author: Andreas Anastasiou [aut, cre],
Ivor Cribben [aut],
Piotr Fryzlewicz [aut]
Maintainer: Andreas Anastasiou <anastasiou.andreas@ucy.ac.cy>
Diff between ccid versions 1.0.0 dated 2021-01-07 and 1.1.0 dated 2021-12-20
DESCRIPTION | 14 ++++++++------ MD5 | 6 +++--- R/detect_cpts.R | 17 +++++++++++------ R/misc.R | 3 ++- 4 files changed, 24 insertions(+), 16 deletions(-)
Title: Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints
Description: The following several classes of frailty models using a penalized likelihood estimation on the hazard function but also a parametric estimation can be fit using this R package:
1) A shared frailty model (with gamma or log-normal frailty distribution) and Cox proportional hazard model. Clustered and recurrent survival times can be studied.
2) Additive frailty models for proportional hazard models with two correlated random effects (intercept random effect with random slope).
3) Nested frailty models for hierarchically clustered data (with 2 levels of clustering) by including two iid gamma random effects.
4) Joint frailty models in the context of the joint modelling for recurrent events with terminal event for clustered data or not. A joint frailty model for two semi-competing risks and clustered data is also proposed.
5) Joint general frailty models in the context of the joint modelling for recurrent events with terminal event data with two independent frailty terms.
6) Joint Nested frailty models in the context of the joint modelling for recurrent events with terminal event, for hierarchically clustered data (with two levels of clustering) by including two iid gamma random effects.
7) Multivariate joint frailty models for two types of recurrent events and a terminal event.
8) Joint models for longitudinal data and a terminal event.
9) Trivariate joint models for longitudinal data, recurrent events and a terminal event.
10) Joint frailty models for the validation of surrogate endpoints in multiple randomized clinical trials with failure-time endpoints
with the possibility to use a mediation analysis model.
11) Conditional and Marginal two-part joint models for longitudinal semicontinuous data and a terminal event.
12) Joint frailty-copula models for the validation of surrogate endpoints in multiple randomized clinical trials with failure-time endpoints.
13) Generalized shared and joint frailty models for recurrent and terminal events. Proportional hazards (PH), additive hazard (AH), proportional odds (PO) and probit models are available in a fully parametric framework. For PH and AH models, it is possible to consider type-varying coefficients and flexible semiparametric hazard function.
Prediction values are available (for a terminal event or for a new recurrent event). Left-truncated (not for Joint model), right-censored data, interval-censored data (only for Cox proportional hazard and shared frailty model) and strata are allowed. In each model, the random effects have the gamma or normal distribution. Now, you can also consider time-varying covariates effects in Cox, shared and joint frailty models (1-5). The package includes concordance measures for Cox proportional hazards models and for shared frailty models.
Moreover, the package can be used with its shiny application, in a local mode or by following the link below.
Author: Virginie Rondeau, Juan R. Gonzalez, Yassin Mazroui, Audrey
Mauguen, Amadou Diakite, Alexandre Laurent, Myriam Lopez,
Agnieszka Krol, Casimir L. Sofeu, Julien Dumerc, Denis Rustand,
Jocelyn Chauvet, Quentin Le Coent
Maintainer: Virginie Rondeau <virginie.rondeau@u-bordeaux.fr>
Diff between frailtypack versions 3.4.0 dated 2021-06-16 and 3.5.0 dated 2021-12-20
DESCRIPTION | 35 MD5 | 57 NAMESPACE | 4 NEWS | 132 R/jointSurroCopPenal.R | 833 +-- R/jointSurroPenal.R | 1214 +++-- R/jointSurroPenalSimul.R | 596 +- R/plot.jointSurroMed.R |only R/summary.jointSurroMed.R |only R/summary.jointSurroPenal.R | 110 THANKS | 2 build/vignette.rds |binary inst/doc/Package_summary.Rmd | 3 inst/doc/Package_summary.html | 1718 +++---- man/figures/jointsurromed.png |only man/figures/rt.png |only man/jointSurroCopPenal.Rd | 426 - man/jointSurroPenal.Rd | 1225 +++-- man/jointSurroPenalSimul.Rd | 296 - man/plot.jointSurroMed.Rd |only man/summary.jointSurroMed.Rd |only man/summary.jointSurroPenal.Rd | 40 src/Aparameters.f90 | 31 src/Makevars | 4 src/aaOptim_SCL_0.f90 | 200 src/autres_fonctions.f90 | 927 ++-- src/frailtypack.h | 403 - src/funcpajsplines_surrogate_scl_2.f90 | 2841 +++++-------- src/init.c | 8 src/jointSurrogate.f90 | 7155 +++++++++++++-------------------- src/joint_surrogate.f90 | 4159 ++++++------------- src/natural_effects.f90 |only vignettes/Package_summary.Rmd | 3 33 files changed, 9853 insertions(+), 12569 deletions(-)
Title: Shadow Text Grob and Layer
Description: Implement shadowtextGrob() for 'grid' and geom_shadowtext() layer for 'ggplot2'.
These functions create/draw text grob with background shadow.
Author: Guangchuang Yu [aut, cre]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between shadowtext versions 0.0.9 dated 2021-09-19 and 0.1.0 dated 2021-12-20
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NAMESPACE | 1 + NEWS.md | 6 +++++- R/geom-shadowtext.R | 10 ++++++++++ build/vignette.rds |binary inst/doc/shadowtext.html | 4 ++-- man/ggproto-shadowtext.Rd | 1 + 8 files changed, 30 insertions(+), 14 deletions(-)
Title: Graph Kernels
Description: A fast C++ implementation for computing various graph kernels including (1) simple kernels between vertex and/or edge label histograms, (2) graphlet kernels, (3) random walk kernels (popular baselines), and (4) the Weisfeiler-Lehman graph kernel (state-of-the-art).
Author: Mahito Sugiyama [aut, cre],
The development of the graphkernels open access software package was
financially supported by the Horizon 2020/CDS-QUAMRI/634541
project. This support is gratefully acknowledged. [fnd]
Maintainer: Mahito Sugiyama <mahito@nii.ac.jp>
Diff between graphkernels versions 1.6 dated 2018-05-30 and 1.6.1 dated 2021-12-20
DESCRIPTION | 22 ++++++++++++++++------ MD5 | 16 ++++++++-------- man/CalculateConnectedGraphletKernel.Rd | 2 +- man/CalculateGraphletKernel.Rd | 2 +- man/CalculateGraphletKernelCpp.Rd | 2 +- man/CalculateShortestPathKernel.Rd | 2 +- man/CalculateWLKernel.Rd | 2 +- man/graphkernels-package.Rd | 8 ++++---- man/mutag.Rd | 2 +- 9 files changed, 34 insertions(+), 24 deletions(-)
Title: Interface to the 'Daymet' Web Services
Description: Programmatic interface to the 'Daymet' web services
(<http://daymet.ornl.gov>). Allows for easy downloads of
'Daymet' climate data directly to your R workspace or your computer.
Routines for both single pixel data downloads and
gridded (netCDF) data are provided.
Author: Koen Hufkens [aut, cre] (<https://orcid.org/0000-0002-5070-8109>)
Maintainer: Koen Hufkens <koen.hufkens@gmail.com>
Diff between daymetr versions 1.5 dated 2021-05-25 and 1.6 dated 2021-12-20
DESCRIPTION | 7 ++++--- MD5 | 22 +++++++++++----------- R/download_daymet_ncss.r | 14 +++++++++++++- R/zzz.r | 13 +------------ build/vignette.rds |binary inst/doc/daymetr-vignette.Rmd | 7 ++++++- inst/doc/daymetr-vignette.html | 26 ++++++++++++++++---------- man/daymetr.Rd | 6 +++++- man/download_daymet_ncss.Rd | 9 +++++++-- tests/testthat/test_ancillary_functions.r | 6 ------ tests/testthat/test_tile_downloads.r | 8 ++++++++ vignettes/daymetr-vignette.Rmd | 7 ++++++- 12 files changed, 77 insertions(+), 48 deletions(-)
Title: ROC Curve Inference with and without Covariates
Description: Estimates the pooled (unadjusted) Receiver Operating Characteristic (ROC) curve, the covariate-adjusted ROC (AROC) curve, and the covariate-specific/conditional ROC (cROC) curve by different methods, both Bayesian and frequentist. Also, it provides functions to obtain ROC-based optimal cutpoints utilizing several criteria. Based on Erkanli, A. et al. (2006) <doi:10.1002/sim.2496>; Faraggi, D. (2003) <doi:10.1111/1467-9884.00350>; Gu, J. et al. (2008) <doi:10.1002/sim.3366>; Inacio de Carvalho, V. et al. (2013) <doi:10.1214/13-BA825>; Inacio de Carvalho, V., and Rodriguez-Alvarez, M.X. (2018) <arXiv:1806.00473>; Janes, H., and Pepe, M.S. (2009) <doi:10.1093/biomet/asp002>; Pepe, M.S. (1998) <http://www.jstor.org/stable/2534001?seq=1>; Rodriguez-Alvarez, M.X. et al. (2011a) <doi:10.1016/j.csda.2010.07.018>; Rodriguez-Alvarez, M.X. et al. (2011a) <doi:10.1007/s11222-010-9184-1>. Please see Rodriguez-Alvarez, M.X. and Inacio, V. (20208) <arXiv:2003.13111> for more details.
Author: Maria Xose Rodriguez-Alvarez [aut, cre]
(<https://orcid.org/0000-0002-1329-9238>),
Vanda Inacio [aut] (<https://orcid.org/0000-0001-8084-1616>)
Maintainer: Maria Xose Rodriguez-Alvarez <mxrodriguez@uvigo.es>
Diff between ROCnReg versions 1.0-6 dated 2021-11-23 and 1.0-7 dated 2021-12-20
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NEWS | 4 ++++ build/partial.rdb |binary man/ROCnReg-package.Rd | 4 ++-- man/compute.threshold.AROC.Rd | 12 ++++++------ man/compute.threshold.cROC.Rd | 12 ++++++------ 7 files changed, 28 insertions(+), 24 deletions(-)
Title: IP Address Geolocation
Description: Connectors to online and offline sources for taking IP addresses
and geolocating them to country, city, timezone and other geographic ranges. For
individual connectors, see the package index.
Author: Os Keyes [aut, cre], Drew Schmidt [aut], David Robinson [ctb],
Chris Davis [ctb], Bob Rudis [ctb], Maxmind, Inc. [cph], Pascal Gloor [cph], IP2Location.com [cph]
Maintainer: Os Keyes <ironholds@gmail.com>
Diff between rgeolocate versions 1.4.1 dated 2021-10-20 and 1.4.2 dated 2021-12-20
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS | 7 +++++++ R/maxmind.R | 4 ++-- inst/doc/Introduction_to_rgeolocate.html | 4 ++-- man/maxmind.Rd | 4 ++-- src/IP2Location.c | 5 ++++- tests/testthat/test_maxmind.R | 6 +++--- 8 files changed, 31 insertions(+), 21 deletions(-)
Title: Fetch Economic and Financial Time Series Data from Public
Sources
Description: Download economic and financial time series from public sources,
including the St Louis Fed's FRED system, Yahoo Finance, the US Bureau of Labor Statistics,
the US Energy Information Administration, the World Bank, Eurostat, the European Central Bank,
the Bank of England, the UK's Office of National Statistics, Deutsche Bundesbank, and INSEE.
Author: Abiel Reinhart <abielr@gmail.com>
Maintainer: Abiel Reinhart <abielr@gmail.com>
Diff between pdfetch versions 0.2.4 dated 2019-07-30 and 0.2.5 dated 2021-12-20
DESCRIPTION | 14 +++++++------- MD5 | 22 +++++++++++----------- NEWS | 6 ++++++ R/help.R | 1 + R/pdfetch.R | 38 +++++++++++++++++++++----------------- man/pdfetch.Rd | 2 +- man/pdfetch_BUNDESBANK.Rd | 2 +- man/pdfetch_EIA.Rd | 6 ++++-- man/pdfetch_EUROSTAT.Rd | 2 +- man/pdfetch_INSEE.Rd | 2 +- man/pdfetch_WB.Rd | 2 +- man/pdfetch_YAHOO.Rd | 10 +++++++--- 12 files changed, 62 insertions(+), 45 deletions(-)
Title: Minimal R/Shiny Interface to JavaScript Library 'ECharts'
Description: The goal is to deliver the full functionality of 'ECharts' with minimal overhead. 'ECharts' is based on data structures and 'echarty' users build R lists for these same data structures. One to three 'echarty' commands are usually sufficient to produce any chart.
Author: Larry Helgason [aut, cre, cph],
John Coene [aut, cph]
Maintainer: Larry Helgason <larry@helgasoft.com>
Diff between echarty versions 1.4.2 dated 2021-11-06 and 1.4.3 dated 2021-12-20
DESCRIPTION | 8 +-- MD5 | 20 ++++----- NEWS.md | 6 ++ R/echarty.R | 14 +++--- R/examples.R | 15 ++++--- inst/htmlwidgets/echarty.js | 24 ----------- inst/js/echarts.min.js | 90 ++++++++++++++++++++++---------------------- man/ec.examples.Rd | 15 ++++--- man/ec.plugjs.Rd | 3 - man/ecr.band.Rd | 3 - man/ecr.ebars.Rd | 3 - 11 files changed, 100 insertions(+), 101 deletions(-)
Title: R Database Interface
Description: A database interface definition for communication between R
and relational database management systems. All classes in this
package are virtual and need to be extended by the various R/DBMS
implementations.
Author: R Special Interest Group on Databases (R-SIG-DB) [aut],
Hadley Wickham [aut],
Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>),
R Consortium [fnd]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between DBI versions 1.1.1 dated 2021-01-15 and 1.1.2 dated 2021-12-20
DBI-1.1.1/DBI/R/DBConnection.R |only DBI-1.1.1/DBI/R/DBConnector.R |only DBI-1.1.1/DBI/R/DBDriver.R |only DBI-1.1.1/DBI/R/DBObject.R |only DBI-1.1.1/DBI/R/DBResult.R |only DBI-1.1.1/DBI/R/hidden.R |only DBI-1.1.1/DBI/R/list-pairs.R |only DBI-1.1.1/DBI/R/quote.R |only DBI-1.1.1/DBI/R/rd.R |only DBI-1.1.1/DBI/R/table-create.R |only DBI-1.1.1/DBI/R/table-insert.R |only DBI-1.1.1/DBI/R/table.R |only DBI-1.1.2/DBI/DESCRIPTION | 108 + DBI-1.1.2/DBI/MD5 | 307 +++-- DBI-1.1.2/DBI/NEWS.md | 23 DBI-1.1.2/DBI/R/ANSI.R | 19 DBI-1.1.2/DBI/R/DBI-package.R | 1 DBI-1.1.2/DBI/R/DBIConnection.R |only DBI-1.1.2/DBI/R/DBIConnector.R |only DBI-1.1.2/DBI/R/DBIDriver.R |only DBI-1.1.2/DBI/R/DBIObject.R |only DBI-1.1.2/DBI/R/DBIResult.R |only DBI-1.1.2/DBI/R/Id.R |only DBI-1.1.2/DBI/R/SQL.R |only DBI-1.1.2/DBI/R/SQLKeywords.R |only DBI-1.1.2/DBI/R/SQLKeywords_DBIObject.R |only DBI-1.1.2/DBI/R/SQLKeywords_missing.R |only DBI-1.1.2/DBI/R/data-types.R | 42 DBI-1.1.2/DBI/R/data.R | 55 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DBI-1.1.2/DBI/R/dbListResults.R |only DBI-1.1.2/DBI/R/dbListTables.R |only DBI-1.1.2/DBI/R/dbQuoteIdentifier.R |only DBI-1.1.2/DBI/R/dbQuoteIdentifier_DBIConnection.R |only DBI-1.1.2/DBI/R/dbQuoteLiteral.R |only DBI-1.1.2/DBI/R/dbQuoteLiteral_DBIConnection.R |only DBI-1.1.2/DBI/R/dbQuoteString.R |only DBI-1.1.2/DBI/R/dbQuoteString_DBIConnection.R |only DBI-1.1.2/DBI/R/dbReadTable.R |only DBI-1.1.2/DBI/R/dbReadTable_DBIConnection_Id.R |only DBI-1.1.2/DBI/R/dbReadTable_DBIConnection_character.R |only DBI-1.1.2/DBI/R/dbRemoveTable.R |only DBI-1.1.2/DBI/R/dbRemoveTable_DBIConnection_Id.R |only DBI-1.1.2/DBI/R/dbRollback.R |only DBI-1.1.2/DBI/R/dbSendQuery.R |only DBI-1.1.2/DBI/R/dbSendStatement.R |only DBI-1.1.2/DBI/R/dbSendStatement_DBIConnection_character.R |only DBI-1.1.2/DBI/R/dbSetDataMappings.R |only DBI-1.1.2/DBI/R/dbUnloadDriver.R |only DBI-1.1.2/DBI/R/dbUnquoteIdentifier.R |only DBI-1.1.2/DBI/R/dbUnquoteIdentifier_DBIConnection.R |only DBI-1.1.2/DBI/R/dbWithTransaction.R |only DBI-1.1.2/DBI/R/dbWithTransaction_DBIConnection.R |only DBI-1.1.2/DBI/R/dbWriteTable.R |only DBI-1.1.2/DBI/R/dbWriteTable_DBIConnection_Id_ANY.R |only DBI-1.1.2/DBI/R/dbiDataType.R |only DBI-1.1.2/DBI/R/dbiDataType_AsIs.R |only DBI-1.1.2/DBI/R/dbiDataType_Date.R |only DBI-1.1.2/DBI/R/dbiDataType_POSIXct.R |only DBI-1.1.2/DBI/R/dbiDataType_character.R |only DBI-1.1.2/DBI/R/dbiDataType_data.frame.R |only DBI-1.1.2/DBI/R/dbiDataType_difftime.R |only DBI-1.1.2/DBI/R/dbiDataType_integer.R |only DBI-1.1.2/DBI/R/dbiDataType_list.R |only DBI-1.1.2/DBI/R/dbiDataType_logical.R |only DBI-1.1.2/DBI/R/dbiDataType_numeric.R |only DBI-1.1.2/DBI/R/deprecated.R | 153 -- DBI-1.1.2/DBI/R/fetch.R |only DBI-1.1.2/DBI/R/hms.R | 5 DBI-1.1.2/DBI/R/interpolate.R | 168 -- DBI-1.1.2/DBI/R/isSQLKeyword.R |only DBI-1.1.2/DBI/R/isSQLKeyword_DBIObject_character.R |only DBI-1.1.2/DBI/R/make.db.names.R |only DBI-1.1.2/DBI/R/make.db.names_DBIObject_character.R |only DBI-1.1.2/DBI/R/methods_as_rd.R |only DBI-1.1.2/DBI/R/rownames.R | 2 DBI-1.1.2/DBI/R/show_AnsiConnection.R |only DBI-1.1.2/DBI/R/show_DBIConnection.R |only DBI-1.1.2/DBI/R/show_DBIConnector.R |only DBI-1.1.2/DBI/R/show_DBIDriver.R |only DBI-1.1.2/DBI/R/show_DBIResult.R |only DBI-1.1.2/DBI/R/show_Id.R |only DBI-1.1.2/DBI/R/show_SQL.R |only DBI-1.1.2/DBI/R/sqlAppendTable.R |only DBI-1.1.2/DBI/R/sqlAppendTableTemplate.R |only DBI-1.1.2/DBI/R/sqlAppendTable_DBIConnection.R |only DBI-1.1.2/DBI/R/sqlCreateTable.R |only DBI-1.1.2/DBI/R/sqlCreateTable_DBIConnection.R |only DBI-1.1.2/DBI/R/sqlData.R |only DBI-1.1.2/DBI/R/sqlData_DBIConnection.R |only DBI-1.1.2/DBI/R/sqlInterpolate.R |only DBI-1.1.2/DBI/R/sqlInterpolate_DBIConnection.R |only DBI-1.1.2/DBI/R/sqlParseVariables.R |only DBI-1.1.2/DBI/R/sqlParseVariables_DBIConnection.R |only DBI-1.1.2/DBI/R/summary.R |only DBI-1.1.2/DBI/R/summary_DBIObject.R |only DBI-1.1.2/DBI/R/transactions.R | 146 -- DBI-1.1.2/DBI/README.md | 2 DBI-1.1.2/DBI/build/DBI.pdf |binary DBI-1.1.2/DBI/build/vignette.rds |binary DBI-1.1.2/DBI/inst/doc/DBI-1.html | 206 --- DBI-1.1.2/DBI/inst/doc/DBI-advanced.R | 24 DBI-1.1.2/DBI/inst/doc/DBI-advanced.Rmd | 54 DBI-1.1.2/DBI/inst/doc/DBI-advanced.html | 387 +----- DBI-1.1.2/DBI/inst/doc/DBI-history.html | 196 --- DBI-1.1.2/DBI/inst/doc/DBI-proposal.html | 206 --- DBI-1.1.2/DBI/inst/doc/DBI.R | 16 DBI-1.1.2/DBI/inst/doc/DBI.Rmd | 40 DBI-1.1.2/DBI/inst/doc/DBI.html | 276 ---- DBI-1.1.2/DBI/inst/doc/backend.html | 206 --- DBI-1.1.2/DBI/inst/doc/spec.html | 849 ++++++++------ DBI-1.1.2/DBI/man/DBIConnection-class.Rd | 3 DBI-1.1.2/DBI/man/DBIConnector-class.Rd | 2 DBI-1.1.2/DBI/man/DBIDriver-class.Rd | 2 DBI-1.1.2/DBI/man/DBIObject-class.Rd | 2 DBI-1.1.2/DBI/man/DBIResult-class.Rd | 2 DBI-1.1.2/DBI/man/Id.Rd | 22 DBI-1.1.2/DBI/man/SQL.Rd | 2 DBI-1.1.2/DBI/man/dbAppendTable.Rd | 120 + DBI-1.1.2/DBI/man/dbBind.Rd | 51 DBI-1.1.2/DBI/man/dbCallProc.Rd | 2 DBI-1.1.2/DBI/man/dbCanConnect.Rd | 2 DBI-1.1.2/DBI/man/dbClearResult.Rd | 12 DBI-1.1.2/DBI/man/dbColumnInfo.Rd | 17 DBI-1.1.2/DBI/man/dbConnect.Rd | 2 DBI-1.1.2/DBI/man/dbCreateTable.Rd | 84 + DBI-1.1.2/DBI/man/dbDataType.Rd | 12 DBI-1.1.2/DBI/man/dbDisconnect.Rd | 4 DBI-1.1.2/DBI/man/dbDriver.Rd | 2 DBI-1.1.2/DBI/man/dbExecute.Rd | 16 DBI-1.1.2/DBI/man/dbExistsTable.Rd | 25 DBI-1.1.2/DBI/man/dbFetch.Rd | 22 DBI-1.1.2/DBI/man/dbGetConnectArgs.Rd | 2 DBI-1.1.2/DBI/man/dbGetException.Rd | 2 DBI-1.1.2/DBI/man/dbGetInfo.Rd | 2 DBI-1.1.2/DBI/man/dbGetQuery.Rd | 22 DBI-1.1.2/DBI/man/dbGetRowCount.Rd | 12 DBI-1.1.2/DBI/man/dbGetRowsAffected.Rd | 12 DBI-1.1.2/DBI/man/dbGetStatement.Rd | 12 DBI-1.1.2/DBI/man/dbHasCompleted.Rd | 14 DBI-1.1.2/DBI/man/dbIsReadOnly.Rd | 2 DBI-1.1.2/DBI/man/dbIsValid.Rd | 2 DBI-1.1.2/DBI/man/dbListConnections.Rd | 2 DBI-1.1.2/DBI/man/dbListFields.Rd | 24 DBI-1.1.2/DBI/man/dbListObjects.Rd | 12 DBI-1.1.2/DBI/man/dbListResults.Rd | 2 DBI-1.1.2/DBI/man/dbListTables.Rd | 12 DBI-1.1.2/DBI/man/dbQuoteIdentifier.Rd | 20 DBI-1.1.2/DBI/man/dbQuoteLiteral.Rd | 24 DBI-1.1.2/DBI/man/dbQuoteString.Rd | 22 DBI-1.1.2/DBI/man/dbReadTable.Rd | 50 DBI-1.1.2/DBI/man/dbRemoveTable.Rd | 28 DBI-1.1.2/DBI/man/dbSendQuery.Rd | 22 DBI-1.1.2/DBI/man/dbSendStatement.Rd | 22 DBI-1.1.2/DBI/man/dbSetDataMappings.Rd | 2 DBI-1.1.2/DBI/man/dbUnquoteIdentifier.Rd | 14 DBI-1.1.2/DBI/man/dbWithTransaction.Rd | 19 DBI-1.1.2/DBI/man/dbWriteTable.Rd | 61 - DBI-1.1.2/DBI/man/hidden_aliases.Rd | 255 ++-- DBI-1.1.2/DBI/man/make.db.names.Rd | 41 DBI-1.1.2/DBI/man/rownames.Rd | 1 DBI-1.1.2/DBI/man/sqlAppendTable.Rd | 13 DBI-1.1.2/DBI/man/sqlCreateTable.Rd | 13 DBI-1.1.2/DBI/man/sqlData.Rd | 2 DBI-1.1.2/DBI/man/sqlInterpolate.Rd | 2 DBI-1.1.2/DBI/man/sqlParseVariables.Rd | 14 DBI-1.1.2/DBI/man/transactions.Rd | 33 DBI-1.1.2/DBI/tests/testthat.R | 2 DBI-1.1.2/DBI/tests/testthat/helper-dummy.R | 2 DBI-1.1.2/DBI/tests/testthat/test-interpolate.R | 7 DBI-1.1.2/DBI/tests/testthat/test-quote.R | 20 DBI-1.1.2/DBI/tests/testthat/test-sql-df.R | 4 DBI-1.1.2/DBI/vignettes/DBI-advanced.Rmd | 54 DBI-1.1.2/DBI/vignettes/DBI.Rmd | 40 220 files changed, 2080 insertions(+), 2738 deletions(-)
Title: Common Mean Vector under Copula Models
Description: Estimate bivariate common mean vector under copula models with known correlation. In the current version, available copulas are the Clayton, Gumbel, Frank, Farlie-Gumbel-Morgenstern (FGM), and normal copulas. See Shih et al. (2019) <doi:10.1080/02331888.2019.1581782> and Shih et al. (2021) <under review> for details under the FGM and general copulas, respectively.
Author: Jia-Han Shih
Maintainer: Jia-Han Shih <tommy355097@gmail.com>
Diff between CommonMean.Copula versions 1.0.2 dated 2021-12-19 and 1.0.3 dated 2021-12-20
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- R/CommonMean.Copula.R | 34 +++++++++++++++++++++++++++++++--- build/partial.rdb |binary man/CommonMean.Copula-package.rd | 2 +- man/CommonMean.Copula.Rd | 5 ++++- 6 files changed, 46 insertions(+), 15 deletions(-)
More information about CommonMean.Copula at CRAN
Permanent link
Title: Agricultural Datasets
Description: Datasets from books, papers, and websites related to agriculture.
Example graphics and analyses are included. Data come from small-plot trials,
multi-environment trials, uniformity trials, yield monitors, and more.
Author: Kevin Wright [aut, cre] (<https://orcid.org/0000-0002-0617-8673>)
Maintainer: Kevin Wright <kw.stat@gmail.com>
Diff between agridat versions 1.18 dated 2021-01-12 and 1.20 dated 2021-12-20
agridat-1.18/agridat/data/correa.soybean.uniformity.txt |only agridat-1.18/agridat/data/mead.cowpeamaize.txt |only agridat-1.18/agridat/man/correa.soybean.uniformity.Rd |only agridat-1.18/agridat/man/mead.cowpeamaize.Rd |only agridat-1.18/agridat/man/odland.soy.uniformity.Rd |only agridat-1.20/agridat/DESCRIPTION | 8 agridat-1.20/agridat/MD5 | 90 + agridat-1.20/agridat/NEWS.md | 22 agridat-1.20/agridat/build/vignette.rds |binary agridat-1.20/agridat/data/arankacami.groundnut.uniformity.txt |only agridat-1.20/agridat/data/barrero.maize.txt |only agridat-1.20/agridat/data/buntaran.wheat.txt |only agridat-1.20/agridat/data/dasilva.soybean.uniformity.txt |only agridat-1.20/agridat/data/gomez.heterogeneity.txt |only agridat-1.20/agridat/data/grover.diallel.txt |only agridat-1.20/agridat/data/grover.rcb.subsample.txt |only agridat-1.20/agridat/data/hadasch.lettuce.markers.txt |only agridat-1.20/agridat/data/hadasch.lettuce.txt |only agridat-1.20/agridat/data/john.alpha.txt | 146 +-- agridat-1.20/agridat/data/jones.corn.uniformity.txt |only agridat-1.20/agridat/data/mead.cowpea.maize.txt |only agridat-1.20/agridat/data/petersen.sorghum.cowpea.txt |only agridat-1.20/agridat/data/woodman.pig.txt |only agridat-1.20/agridat/inst/doc/agridat_data.Rmd | 116 +- agridat-1.20/agridat/inst/doc/agridat_data.html | 485 +++------- agridat-1.20/agridat/inst/doc/agridat_examples.Rmd | 16 agridat-1.20/agridat/inst/doc/agridat_examples.html | 349 +------ agridat-1.20/agridat/inst/doc/agridat_intro.Rmd | 5 agridat-1.20/agridat/inst/doc/agridat_intro.html | 221 ---- agridat-1.20/agridat/inst/doc/agridat_uniformity.Rmd |only agridat-1.20/agridat/inst/doc/agridat_uniformity.html |only agridat-1.20/agridat/man/acorsi.grayleafspot.Rd | 30 agridat-1.20/agridat/man/agridat.Rd | 21 agridat-1.20/agridat/man/arankacami.groundnut.uniformity.Rd |only agridat-1.20/agridat/man/barrero.maize.Rd |only agridat-1.20/agridat/man/bond.diallel.Rd | 2 agridat-1.20/agridat/man/buntaran.wheat.Rd |only agridat-1.20/agridat/man/crampton.pig.Rd | 56 - agridat-1.20/agridat/man/crowder.seeds.Rd | 138 +- agridat-1.20/agridat/man/damesa.maize.Rd | 4 agridat-1.20/agridat/man/dasilva.soybean.uniformity.Rd |only agridat-1.20/agridat/man/durban.rowcol.Rd | 2 agridat-1.20/agridat/man/durban.splitplot.Rd | 2 agridat-1.20/agridat/man/gomez.heterogeneity.Rd |only agridat-1.20/agridat/man/grover.diallel.Rd |only agridat-1.20/agridat/man/grover.rcb.subsample.Rd |only agridat-1.20/agridat/man/hadasch.lettuce.Rd |only agridat-1.20/agridat/man/hayman.tobacco.Rd | 25 agridat-1.20/agridat/man/ilri.sheep.Rd | 30 agridat-1.20/agridat/man/john.alpha.Rd | 43 agridat-1.20/agridat/man/jones.corn.uniformity.Rd |only agridat-1.20/agridat/man/keen.potatodamage.Rd | 6 agridat-1.20/agridat/man/lonnquist.maize.Rd | 20 agridat-1.20/agridat/man/mead.cowpea.maize.Rd |only agridat-1.20/agridat/man/minnesota.barley.yield.Rd | 1 agridat-1.20/agridat/man/odland.soybean.uniformity.Rd |only agridat-1.20/agridat/man/petersen.sorghum.cowpea.Rd |only agridat-1.20/agridat/man/woodman.pig.Rd |only agridat-1.20/agridat/man/yates.oats.Rd | 2 agridat-1.20/agridat/vignettes/agridat_data.Rmd | 116 +- agridat-1.20/agridat/vignettes/agridat_examples.Rmd | 16 agridat-1.20/agridat/vignettes/agridat_intro.Rmd | 5 agridat-1.20/agridat/vignettes/agridat_uniformity.Rmd |only 63 files changed, 860 insertions(+), 1117 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-31 0.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-26 1.6
2020-04-22 1.5
2020-04-17 1.4
2020-04-07 1.3
2020-03-25 1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-30 2.2.2
2019-05-08 2.2.0
2019-03-17 2.1.2
2019-01-19 2.1.1
2018-12-06 2.1.0
2018-12-03 2.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-04-21 1.0.10-7
2016-12-30 1.0.10-6
2016-05-08 1.0.10-4
2016-03-30 1.0.10-3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-07-28 0.1.0
Title: Rcpp Interface to PostgreSQL
Description: Fully DBI-compliant Rcpp-backed interface to
PostgreSQL <https://www.postgresql.org/>, an open-source relational
database.
Author: Hadley Wickham [aut],
Jeroen Ooms [aut],
Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>),
RStudio [cph],
R Consortium [fnd],
Tomoaki Nishiyama [ctb] (Code for encoding vectors into strings derived
from RPostgreSQL)
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between RPostgres versions 1.4.2 dated 2021-12-05 and 1.4.3 dated 2021-12-20
DESCRIPTION | 42 ++ MD5 | 114 +++++-- NAMESPACE | 1 NEWS.md | 12 R/PqConnection.R | 220 +-------------- R/PqDriver.R | 33 -- R/PqResult.R | 138 +-------- R/RcppExports.R | 8 R/Redshift.R | 12 R/dbAppendTable_PqConnection.R |only R/dbBegin_PqConnection.R |only R/dbBind_PqResult.R |only R/dbClearResult_PqResult.R |only R/dbColumnInfo_PqResult.R |only R/dbCommit_PqConnection.R |only R/dbConnect_PqDriver.R |only R/dbConnect_RedshiftDriver.R |only R/dbDataType_PqConnection.R |only R/dbDataType_PqDriver.R |only R/dbDisconnect_PqConnection.R |only R/dbExistsTable_PqConnection_Id.R |only R/dbExistsTable_PqConnection_character.R |only R/dbFetch_PqResult.R |only R/dbGetInfo_PqConnection.R |only R/dbGetInfo_PqDriver.R |only R/dbGetRowCount_PqResult.R |only R/dbGetRowsAffected_PqResult.R |only R/dbGetStatement_PqResult.R |only R/dbHasCompleted_PqResult.R |only R/dbIsValid_PqConnection.R |only R/dbIsValid_PqDriver.R |only R/dbIsValid_PqResult.R |only R/dbListFields_PqConnection_Id.R |only R/dbListFields_PqConnection_character.R |only R/dbListObjects_PqConnection_ANY.R |only R/dbListTables_PqConnection.R |only R/dbQuoteIdentifier_PqConnection_Id.R |only R/dbQuoteIdentifier_PqConnection_SQL.R |only R/dbQuoteIdentifier_PqConnection_character.R |only R/dbQuoteLiteral_PqConnection.R |only R/dbQuoteString_PqConnection_SQL.R |only R/dbQuoteString_PqConnection_character.R |only R/dbReadTable_PqConnection_character.R |only R/dbRemoveTable_PqConnection_character.R |only R/dbRollback_PqConnection.R |only R/dbSendQuery_PqConnection.R |only R/dbUnloadDriver_PqDriver.R |only R/dbUnquoteIdentifier_PqConnection_SQL.R |only R/dbWriteTable_PqConnection_character_data.frame.R |only R/default.R | 40 +- R/export.R | 1 R/quote.R | 137 --------- R/show_PqConnection.R |only R/sqlData_PqConnection.R |only R/tables.R | 303 ++------------------- R/transactions.R | 52 --- man/Postgres.Rd | 5 man/PqConnection-class.Rd | 14 man/PqDriver-class.Rd | 11 man/PqResult-class.Rd | 32 +- man/Redshift.Rd | 3 man/dbDataType.Rd | 7 man/postgres-query.Rd | 41 +- man/postgres-tables.Rd | 114 ++++--- man/postgres-transactions.Rd | 6 man/postgresIsTransacting.Rd |only man/postgresWaitForNotify.Rd | 14 man/quote.Rd | 36 +- src/DbConnection.cpp | 15 - src/DbConnection.h | 4 src/DbDataFrame.cpp | 2 src/RcppExports.cpp | 24 + src/connection.cpp | 9 tests/testthat/helper-DBItest.R | 7 tests/testthat/test-DBItest.R | 2 tests/testthat/test-Redshift.R | 12 tests/testthat/test-dbGetQuery.R | 2 tests/testthat/test-dbQuoteIdentifier.R | 28 - tests/testthat/test-dbWriteTable.R | 288 +++++++++---------- tests/testthat/test-isTransacting.R |only 80 files changed, 622 insertions(+), 1167 deletions(-)
Title: Database Interface and MariaDB Driver
Description: Implements a DBI-compliant interface to MariaDB
(<https://mariadb.org/>) and MySQL (<https://www.mysql.com/>)
databases.
Author: Kirill Müller [aut, cre] (<https://orcid.org/0000-0002-1416-3412>),
Jeroen Ooms [aut] (<https://orcid.org/0000-0002-4035-0289>),
David James [aut],
Saikat DebRoy [aut],
Hadley Wickham [aut],
Jeffrey Horner [aut],
R Consortium [fnd],
RStudio [cph]
Maintainer: Kirill Müller <krlmlr+r@mailbox.org>
Diff between RMariaDB versions 1.2.0 dated 2021-12-12 and 1.2.1 dated 2021-12-20
RMariaDB-1.2.0/RMariaDB/R/RMariaDB.R |only RMariaDB-1.2.0/RMariaDB/R/rownames.R |only RMariaDB-1.2.1/RMariaDB/DESCRIPTION | 47 + RMariaDB-1.2.1/RMariaDB/MD5 | 102 +- RMariaDB-1.2.1/RMariaDB/NEWS.md | 11 RMariaDB-1.2.1/RMariaDB/R/MariaDBConnection.R | 72 - RMariaDB-1.2.1/RMariaDB/R/MariaDBDriver.R | 24 RMariaDB-1.2.1/RMariaDB/R/MariaDBResult.R | 7 RMariaDB-1.2.1/RMariaDB/R/RMariaDB-package.R |only RMariaDB-1.2.1/RMariaDB/R/compatRowNames.R |only RMariaDB-1.2.1/RMariaDB/R/connect.R | 288 +------ RMariaDB-1.2.1/RMariaDB/R/dbAppendTable_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbBegin_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbBind_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbClearResult_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbColumnInfo_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbCommit_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbConnect_MariaDBDriver.R |only RMariaDB-1.2.1/RMariaDB/R/dbDataType_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbDataType_MariaDBDriver.R |only RMariaDB-1.2.1/RMariaDB/R/dbDisconnect_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbExistsTable_MariaDBConnection_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbFetch_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbGetInfo_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbGetInfo_MariaDBDriver.R |only RMariaDB-1.2.1/RMariaDB/R/dbGetRowCount_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbGetRowsAffected_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbGetStatement_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbHasCompleted_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbIsValid_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbIsValid_MariaDBDriver.R |only RMariaDB-1.2.1/RMariaDB/R/dbIsValid_MariaDBResult.R |only RMariaDB-1.2.1/RMariaDB/R/dbListObjects_MariaDBConnection_ANY.R |only RMariaDB-1.2.1/RMariaDB/R/dbListTables_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbQuoteIdentifier_MariaDBConnection_Id.R |only RMariaDB-1.2.1/RMariaDB/R/dbQuoteIdentifier_MariaDBConnection_SQL.R |only RMariaDB-1.2.1/RMariaDB/R/dbQuoteIdentifier_MariaDBConnection_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbQuoteLiteral_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbQuoteString_MariaDBConnection_SQL.R |only RMariaDB-1.2.1/RMariaDB/R/dbQuoteString_MariaDBConnection_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbReadTable_MariaDBConnection_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbRemoveTable_MariaDBConnection_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbRollback_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/dbSendQuery_MariaDBConnection_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbSendStatement_MariaDBConnection_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbUnloadDriver_MariaDBDriver.R |only RMariaDB-1.2.1/RMariaDB/R/dbUnquoteIdentifier_MariaDBConnection_SQL.R |only RMariaDB-1.2.1/RMariaDB/R/dbWriteTable_MariaDBConnection_character_character.R |only RMariaDB-1.2.1/RMariaDB/R/dbWriteTable_MariaDBConnection_character_data.frame.R |only RMariaDB-1.2.1/RMariaDB/R/default.R | 36 RMariaDB-1.2.1/RMariaDB/R/export.R | 2 RMariaDB-1.2.1/RMariaDB/R/query.R | 152 --- RMariaDB-1.2.1/RMariaDB/R/quote.R | 96 -- RMariaDB-1.2.1/RMariaDB/R/show_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/sqlData_MariaDBConnection.R |only RMariaDB-1.2.1/RMariaDB/R/table.R | 400 ---------- RMariaDB-1.2.1/RMariaDB/R/transaction.R | 39 RMariaDB-1.2.1/RMariaDB/configure | 2 RMariaDB-1.2.1/RMariaDB/man/MariaDBConnection-class.Rd | 20 RMariaDB-1.2.1/RMariaDB/man/MariaDBDriver-class.Rd | 14 RMariaDB-1.2.1/RMariaDB/man/MariaDBResult-class.Rd | 3 RMariaDB-1.2.1/RMariaDB/man/RMariaDB-package.Rd | 2 RMariaDB-1.2.1/RMariaDB/man/dbConnect-MariaDBDriver-method.Rd | 53 - RMariaDB-1.2.1/RMariaDB/man/dbDataType.Rd | 8 RMariaDB-1.2.1/RMariaDB/man/mariadb-quoting.Rd | 37 RMariaDB-1.2.1/RMariaDB/man/mariadb-tables.Rd | 102 +- RMariaDB-1.2.1/RMariaDB/man/query.Rd | 63 - RMariaDB-1.2.1/RMariaDB/man/result-meta.Rd | 36 RMariaDB-1.2.1/RMariaDB/man/transactions.Rd | 25 RMariaDB-1.2.1/RMariaDB/src/Makevars.ucrt | 1 RMariaDB-1.2.1/RMariaDB/src/Makevars.win | 5 RMariaDB-1.2.1/RMariaDB/tests/testthat/test-DBItest.R | 2 RMariaDB-1.2.1/RMariaDB/tests/testthat/test-dbWriteTable.R | 2 RMariaDB-1.2.1/RMariaDB/tests/testthat/test-queries.R | 2 74 files changed, 459 insertions(+), 1194 deletions(-)