Title: Network Analysis and Visualization
Description: Routines for simple graphs and network analysis. It can
handle large graphs very well and provides functions for generating random
and regular graphs, graph visualization, centrality methods and much more.
Author: See AUTHORS file.
Maintainer: Tamas Nepusz <ntamas@gmail.com>
Diff between igraph versions 1.3.2 dated 2022-06-13 and 1.3.3 dated 2022-07-14
DESCRIPTION | 32 +-- MD5 | 113 ++++++----- NAMESPACE | 6 NEWS.md | 48 +++-- R/auto.R | 58 ++++-- R/cliques.R | 14 - R/cohesive.blocks.R | 2 R/conversion.R | 12 + R/env-and-data.R |only R/igraph-package.R | 1 R/indexing.R | 2 R/interface.R | 6 R/iterators.R | 140 +++++++++++--- R/operators.R | 27 ++ R/paths.R | 2 R/plot.R | 3 R/structural.properties.R | 28 +- R/topology.R | 2 configure | 18 - configure.ac | 2 inst/NEWS.md | 48 +++-- man/as_adj_list.Rd | 8 man/dot-data.Rd |only man/ego.Rd | 15 - man/igraph-es-indexing.Rd | 27 ++ man/igraph-vs-indexing.Rd | 22 ++ man/reverse_edges.Rd |only src/Makevars.in | 2 src/Makevars.ucrt | 4 src/Makevars.win | 4 src/core/centrality/centrality_other.c | 108 +++++------ src/core/community/community_misc.c | 56 +++++ src/core/community/modularity.c | 46 ++-- src/core/constructors/basic_constructors.c | 3 src/core/constructors/lcf.c | 2 src/core/core/vector.pmt | 11 - src/core/games/grg.c | 17 + src/core/games/islands.c | 11 - src/core/graph/iterators.c | 192 ++++++++++---------- src/core/graph/type_indexededgelist.c | 7 src/core/layout/drl/drl_layout.cpp | 13 + src/core/layout/drl/drl_layout_3d.cpp | 34 +++ src/core/layout/fruchterman_reingold.c | 11 + src/core/layout/kamada_kawai.c | 27 +- src/core/linalg/arpack.c | 78 +++----- src/core/misc/scan.c | 11 - src/core/operators/compose.c | 6 src/core/operators/permute.c | 66 +++++- src/core/operators/reverse.c |only src/core/properties/multiplicity.c | 32 +-- src/include/igraph_error.h | 4 src/include/igraph_iterators.h | 18 - src/include/igraph_operators.h | 1 src/include/igraph_version.h | 2 src/init.c | 2 src/rinterface.c | 27 ++ tests/testthat/test_deprecated_indexing_functions.R |only tests/testthat/test_indexing.R | 11 + tests/testthat/test_iterators.R | 21 ++ tests/testthat/test_operators.R | 32 +++ 60 files changed, 1001 insertions(+), 494 deletions(-)
Title: A Package for Importing Data from Our World in Data
Description: Imports data from the Our World in Data website, offering easy to use functions for searching for datasets, downloading them into R and visualising them.
Author: Piers York
Maintainer: Piers York <piersyork@gmail.com>
Diff between owidR versions 1.2.1 dated 2022-03-15 and 1.3.0 dated 2022-07-14
DESCRIPTION | 10 MD5 | 24 - NEWS.md | 8 R/owid.R | 137 ++++---- README.md | 68 ++-- build/vignette.rds |binary inst/doc/example-analysis.R | 8 inst/doc/example-analysis.Rmd | 8 inst/doc/example-analysis.html | 647 +++++++++++++++++++++++++++++++++++------ inst/images/map-1.png |binary inst/images/owid_plot-1.png |binary inst/images/owid_plot2-1.png |binary vignettes/example-analysis.Rmd | 8 13 files changed, 718 insertions(+), 200 deletions(-)
Title: Single-Cell Integrator and Batch Effect Remover
Description: Remove batch effects by projecting query batches into the reference batch space.
Author: Dailin Gan [aut, cre] ,
Jun Li [aut]
Maintainer: Dailin Gan <dgan@nd.edu>
Diff between SCIBER versions 0.1.3 dated 2022-07-06 and 0.1.4 dated 2022-07-14
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/main.R | 4 ++-- inst/doc/my-vignette.html | 6 +++--- man/SCIBER.Rd | 4 ++-- 5 files changed, 14 insertions(+), 14 deletions(-)
Title: Class and Methods for Spectral Data
Description: Input/Output, processing and visualization of spectra taken with different spectrometers, including SVC (Spectra Vista), ASD and PSR (Spectral Evolution). Implements an S3 class 'spectra' that other packages can build on. Provides methods to access, plot, manipulate, splice sensor overlap, vector normalize and smooth spectra.
Author: Jose Eduardo Meireles [aut, cre],
Anna K. Schweiger [aut],
Jeannine Cavender-Bares [aut]
Maintainer: Jose Eduardo Meireles <jemeireles@gmail.com>
Diff between spectrolab versions 0.0.16 dated 2021-09-26 and 0.0.17 dated 2022-07-14
DESCRIPTION | 10 +++++----- MD5 | 20 +++++++++++--------- NEWS.md | 7 ++++++- R/read_spectra.R | 19 +++++++++++-------- R/spectra.R | 12 +++++++++--- README.md | 2 +- build/vignette.rds |binary inst/doc/introduction_to_spectrolab.pdf |binary inst/doc/match_sensors.pdf |binary inst/extdata/psr_DN_brett |only man/apply_by_band.Rd | 2 -- 11 files changed, 43 insertions(+), 29 deletions(-)
Title: Discovery of Process Models with the Heuristics Miner
Description: Provides the heuristics miner algorithm for process discovery
as proposed by Weijters et al. (2011) <doi:10.1109/CIDM.2011.5949453>. The
algorithm builds a causal net from an event log created with the 'bupaR'
package. Event logs are a set of ordered sequences of events for which
'bupaR' provides the S3 class eventlog(). The discovered causal nets
can be visualised as 'htmlwidgets' and it is possible to annotate them with
the occurrence frequency or processing and waiting time of process
activities.
Author: Felix Mannhardt [aut, cre]
Maintainer: Felix Mannhardt <f.mannhardt@tue.nl>
Diff between heuristicsmineR versions 0.2.5 dated 2021-10-11 and 0.2.6 dated 2022-07-14
DESCRIPTION | 9 +++++---- MD5 | 12 ++++++------ README.md | 2 +- build/partial.rdb |binary data/L_heur_1.rda |binary data/L_heur_2.rda |binary data/hospital_multi_perspective.rda |binary 7 files changed, 12 insertions(+), 11 deletions(-)
More information about heuristicsmineR at CRAN
Permanent link
Title: Utilities for the Forest Research Institute of the State
Baden-Wuerttemberg
Description: Miscellaneous utilities, tools and helper
functions for finding and searching files on disk, searching for and
removing R objects from the workspace.
These are utilities for packages
<https://CRAN.R-project.org/package=cleanr>,
<https://CRAN.R-project.org/package=document>,
<https://CRAN.R-project.org/package=fakemake>,
<https://CRAN.R-project.org/package=packager> and
<https://CRAN.R-project.org/package=rasciidoc>.
Does not import or depend on any third party package, but on core R
only (i.e. it may depend on packages with priority 'base').
Author: Andreas Dominik Cullmann [aut, cre]
Maintainer: Andreas Dominik Cullmann <fvafrcu@mailbox.org>
Diff between fritools versions 3.5.0 dated 2022-05-20 and 3.5.1 dated 2022-07-14
fritools-3.5.0/fritools/inst/doc/An_Introduction_to_fritools.Rmd |only fritools-3.5.0/fritools/vignettes/An_Introduction_to_fritools.Rmd |only fritools-3.5.1/fritools/DESCRIPTION | 12 fritools-3.5.1/fritools/MD5 | 73 fritools-3.5.1/fritools/NEWS.md | 7 fritools-3.5.1/fritools/R/boolean.R | 3 fritools-3.5.1/fritools/R/file_copy.R | 2 fritools-3.5.1/fritools/R/file_save.R | 17 fritools-3.5.1/fritools/R/is_cran.R | 4 fritools-3.5.1/fritools/R/options.R | 8 fritools-3.5.1/fritools/R/subsets.R | 11 fritools-3.5.1/fritools/R/tapply.R | 15 fritools-3.5.1/fritools/R/test_helpers.R | 2 fritools-3.5.1/fritools/R/view.R | 12 fritools-3.5.1/fritools/R/wipe_tempdir.R | 4 fritools-3.5.1/fritools/build/vignette.rds |binary fritools-3.5.1/fritools/inst/NEWS.rd | 9 fritools-3.5.1/fritools/inst/doc/An_Introduction_to_fritools.R |only fritools-3.5.1/fritools/inst/doc/An_Introduction_to_fritools.Rasciidoc |only fritools-3.5.1/fritools/inst/doc/An_Introduction_to_fritools.html | 1150 +++++++--- fritools-3.5.1/fritools/inst/runit_tests/runit-csv.R | 6 fritools-3.5.1/fritools/inst/runit_tests/runit-delete_trailing_blank_lines.R | 2 fritools-3.5.1/fritools/inst/runit_tests/runit-delete_trailing_whitespace.R | 2 fritools-3.5.1/fritools/inst/runit_tests/runit-file_copy.R | 6 fritools-3.5.1/fritools/inst/runit_tests/runit-find_files.R | 4 fritools-3.5.1/fritools/inst/runit_tests/runit-r.R | 3 fritools-3.5.1/fritools/inst/source/R/boolean.R | 3 fritools-3.5.1/fritools/inst/source/R/file_copy.R | 2 fritools-3.5.1/fritools/inst/source/R/file_save.R | 17 fritools-3.5.1/fritools/inst/source/R/is_cran.R | 4 fritools-3.5.1/fritools/inst/source/R/options.R | 8 fritools-3.5.1/fritools/inst/source/R/subsets.R | 11 fritools-3.5.1/fritools/inst/source/R/tapply.R | 15 fritools-3.5.1/fritools/inst/source/R/test_helpers.R | 2 fritools-3.5.1/fritools/inst/source/R/view.R | 12 fritools-3.5.1/fritools/inst/source/R/wipe_tempdir.R | 4 fritools-3.5.1/fritools/inst/source/man/is_cran.Rd | 2 fritools-3.5.1/fritools/inst/vignettes_code/An_Introduction_to_fritools.R | 17 fritools-3.5.1/fritools/man/is_cran.Rd | 2 fritools-3.5.1/fritools/vignettes/An_Introduction_to_fritools.Rasciidoc |only 40 files changed, 1046 insertions(+), 405 deletions(-)
Title: Microsoft Finance Time Series Forecasting Framework
Description: Automated time series forecasting developed by Microsoft Finance. The Microsoft Finance Time
Series Forecasting Framework, aka Finn, can be used to forecast any component of the income
statement, balance sheet, or any other area of interest by finance. Any numerical quantity over time,
Finn can be used to forecast it. While it can be applied outside of the finance domain, Finn want built
to meet the needs of financial analysts to better forecast their businesses within a company, and has
a lot of built in features that are specific to the needs of financial forecasters. Happy forecasting!
Author: Mike Tokic [aut, cre] ,
Aadharsh Kannan [aut]
Maintainer: Mike Tokic <mftokic@gmail.com>
Diff between finnts versions 0.1.1 dated 2022-03-28 and 0.2.0 dated 2022-07-14
finnts-0.1.1/finnts/R/azure_batch_parallel.R |only finnts-0.2.0/finnts/DESCRIPTION | 8 finnts-0.2.0/finnts/MD5 | 40 finnts-0.2.0/finnts/NEWS.md | 13 finnts-0.2.0/finnts/R/azure_parallel.R |only finnts-0.2.0/finnts/R/forecast_models.R | 2 finnts-0.2.0/finnts/R/forecast_time_series.R | 117 finnts-0.2.0/finnts/R/utility.R | 2 finnts-0.2.0/finnts/R/validate_forecasting_inputs.R | 23 finnts-0.2.0/finnts/README.md | 2 finnts-0.2.0/finnts/inst/doc/back-testing-and-hyperparameter-tuning.html | 275 + finnts-0.2.0/finnts/inst/doc/best-model-selection.html | 229 + finnts-0.2.0/finnts/inst/doc/external-regressors.html | 229 + finnts-0.2.0/finnts/inst/doc/feature-engineering.html | 291 + finnts-0.2.0/finnts/inst/doc/finnts.html | 251 + finnts-0.2.0/finnts/inst/doc/hierarchical-forecasting.html | 250 + finnts-0.2.0/finnts/inst/doc/models-used-in-finnts.html | 1998 +++++++++- finnts-0.2.0/finnts/inst/doc/parallel-processing.R | 29 finnts-0.2.0/finnts/inst/doc/parallel-processing.Rmd | 49 finnts-0.2.0/finnts/inst/doc/parallel-processing.html | 466 +- finnts-0.2.0/finnts/man/forecast_time_series.Rd | 11 finnts-0.2.0/finnts/vignettes/parallel-processing.Rmd | 49 22 files changed, 4072 insertions(+), 262 deletions(-)
Title: Traveling Salesperson Problem (TSP)
Description: Basic infrastructure and some algorithms for the traveling
salesperson problem (also traveling salesman problem; TSP).
The package provides some simple algorithms and
an interface to the Concorde TSP solver and its implementation of the
Chained-Lin-Kernighan heuristic. The code for Concorde
itself is not included in the package and has to be obtained separately.
Hahsler and Hornik (2007) <doi:10.18637/jss.v023.i02>.
Author: Michael Hahsler [aut, cre, cph]
,
Kurt Hornik [aut, cph]
Maintainer: Michael Hahsler <mhahsler@lyle.smu.edu>
Diff between TSP versions 1.2-0 dated 2022-02-21 and 1.2-1 dated 2022-07-14
DESCRIPTION | 24 ++-- MD5 | 58 ++++----- NAMESPACE | 2 NEWS.md | 9 + R/AAA_TSP-package.R | 1 R/AAA_parameter.R | 7 - R/TOUR.R | 41 +++---- R/TSP.R | 100 ++++++++++------- R/cut_tour.R | 77 ++++++++----- R/reformulare_ATSP_as_TSP.R | 115 ++++++++++++++----- R/solve_TSP.R | 170 +++++++++++++++++------------ R/tour_length.R | 38 ++++-- R/tsp_concorde.R | 204 ++++++++++++++++++++++------------- R/tsp_insertion.R | 10 + R/tsp_nn.R | 13 +- R/tsp_two_opt.R | 17 ++ README.md | 102 ++++++++++------- build/partial.rdb |binary build/vignette.rds |binary data/USCA312.rda |binary data/USCA312_GPS.rda |binary data/USCA50.rda |binary inst/doc/TSP.pdf |binary man/TOUR.Rd | 6 - man/TSP.Rd | 3 man/cut_tour.Rd | 1 man/reformulate_ATSP_as_TSP.Rd | 72 +++++++++--- man/solve_TSP.Rd | 37 +++--- man/tour_length.Rd | 3 tests/testthat/test-insert_cut_etc.R | 13 ++ 30 files changed, 722 insertions(+), 401 deletions(-)
Title: Subject Weighted Support Vector Machines
Description: Functions for subject/instance weighted support vector machines (SVM).
It uses a modified version of 'libsvm' and is compatible with package 'e1071'. It also allows user defined kernel matrix.
Author: Tianchen Xu [aut, cre] ,
Chih-Chung Chang [ctb, cph] ,
Chih-Chen Lin [ctb, cph] ,
Ming-Wei Chang [ctb, cph] ,
Hsuan-Tien Lin [ctb, cph] ,
Ming-Hen Tsai [ctb, cph] ,
Chia-Hua Ho [ctb, cph] ,
Hsiang-Fu Yu [ctb, cph] ,
David Meyer [ctb],
Evgenia Dimitr [...truncated...]
Maintainer: Tianchen Xu <tx2155@columbia.edu>
Diff between WeightSVM versions 1.7-9 dated 2021-10-11 and 1.7-11 dated 2022-07-14
DESCRIPTION | 8 MD5 | 14 R/wsvm.R | 1380 +++++++++++++++++++++++++-------------------------- build/vignette.rds |binary inst/NEWS.Rd | 7 inst/doc/wsvmdoc.pdf |binary man/tune_wsvm.Rd | 2 man/wsvm.Rd | 9 8 files changed, 728 insertions(+), 692 deletions(-)
Title: Multi-Objective Parameter Tuning for Classifiers
Description: Generic methods for parameter tuning of classification algorithms using multiple scoring functions (Muessel et al. (2012), <doi:10.18637/jss.v046.i05>).
Author: Christoph Muessel, Ludwig Lausser, Hans Kestler
Maintainer: Hans Kestler <hans.kestler@uni-ulm.de>
Diff between TunePareto versions 2.5.1 dated 2021-10-09 and 2.5.2 dated 2022-07-14
DESCRIPTION | 9 ++++----- MD5 | 4 ++-- man/rankByDesirability.Rd | 21 ++++++++------------- 3 files changed, 14 insertions(+), 20 deletions(-)
Title: Simple Features for R
Description: Support for simple features, a standardized way to
encode spatial vector data. Binds to 'GDAL' for reading and writing
data, to 'GEOS' for geometrical operations, and to 'PROJ' for
projection conversions and datum transformations. Uses by default the 's2'
package for spherical geometry operations on ellipsoidal (long/lat) coordinates.
Author: Edzer Pebesma [aut, cre] ,
Roger Bivand [ctb] ,
Etienne Racine [ctb],
Michael Sumner [ctb],
Ian Cook [ctb],
Tim Keitt [ctb],
Robin Lovelace [ctb],
Hadley Wickham [ctb],
Jeroen Ooms [ctb] ,
Kirill Mueller [ctb],
Thomas Lin Pedersen [ctb],
Dan Baston [c [...truncated...]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sf versions 1.0-7 dated 2022-03-07 and 1.0-8 dated 2022-07-14
sf-1.0-7/sf/src/sfg.cpp |only sf-1.0-7/sf/tests/testthat/testthat-problems.rds |only sf-1.0-8/sf/DESCRIPTION | 10 sf-1.0-8/sf/MD5 | 218 +-- sf-1.0-8/sf/NAMESPACE | 7 sf-1.0-8/sf/NEWS.md | 40 sf-1.0-8/sf/R/RcppExports.R | 20 sf-1.0-8/sf/R/arith.R | 11 sf-1.0-8/sf/R/bbox.R | 2 sf-1.0-8/sf/R/bind.R | 5 sf-1.0-8/sf/R/crs.R | 4 sf-1.0-8/sf/R/gdal_utils.R | 1 sf-1.0-8/sf/R/geom-transformers.R | 39 sf-1.0-8/sf/R/graticule.R | 7 sf-1.0-8/sf/R/jitter.R | 2 sf-1.0-8/sf/R/join.R | 5 sf-1.0-8/sf/R/make_grid.R | 2 sf-1.0-8/sf/R/nearest.R | 4 sf-1.0-8/sf/R/plot.R | 16 sf-1.0-8/sf/R/proj.R | 2 sf-1.0-8/sf/R/read.R | 53 sf-1.0-8/sf/R/sample.R | 24 sf-1.0-8/sf/R/sf.R | 18 sf-1.0-8/sf/R/sfc.R | 36 sf-1.0-8/sf/R/sp.R | 5 sf-1.0-8/sf/R/stars.R | 54 sf-1.0-8/sf/R/tidyverse.R | 152 +- sf-1.0-8/sf/R/transform.R | 16 sf-1.0-8/sf/R/valid.R | 11 sf-1.0-8/sf/build/vignette.rds |binary sf-1.0-8/sf/inst/doc/sf1.html | 1451 ++++++++++++++--------- sf-1.0-8/sf/inst/doc/sf2.html | 448 ++++--- sf-1.0-8/sf/inst/doc/sf3.html | 850 +++++++------ sf-1.0-8/sf/inst/doc/sf4.html | 449 +++---- sf-1.0-8/sf/inst/doc/sf5.R | 2 sf-1.0-8/sf/inst/doc/sf5.Rmd | 2 sf-1.0-8/sf/inst/doc/sf5.html | 283 ++-- sf-1.0-8/sf/inst/doc/sf6.html | 182 +- sf-1.0-8/sf/inst/doc/sf7.html | 558 +++++--- sf-1.0-8/sf/inst/docker/alma |only sf-1.0-8/sf/inst/docker/centos |only sf-1.0-8/sf/inst/docker/gdal/Dockerfile | 33 sf-1.0-8/sf/man/Ops.Rd | 11 sf-1.0-8/sf/man/bind.Rd | 5 sf-1.0-8/sf/man/coerce-methods.Rd | 2 sf-1.0-8/sf/man/extension_map.Rd | 2 sf-1.0-8/sf/man/gdal_addo.Rd |only sf-1.0-8/sf/man/gdal_utils.Rd | 3 sf-1.0-8/sf/man/geos_unary.Rd | 17 sf-1.0-8/sf/man/plot.Rd | 10 sf-1.0-8/sf/man/sf_project.Rd | 2 sf-1.0-8/sf/man/sfc.Rd | 11 sf-1.0-8/sf/man/st_as_sf.Rd | 13 sf-1.0-8/sf/man/st_crs.Rd | 4 sf-1.0-8/sf/man/st_geometry.Rd | 5 sf-1.0-8/sf/man/st_graticule.Rd | 3 sf-1.0-8/sf/man/st_jitter.Rd | 2 sf-1.0-8/sf/man/st_join.Rd | 5 sf-1.0-8/sf/man/st_layers.Rd | 14 sf-1.0-8/sf/man/st_make_grid.Rd | 2 sf-1.0-8/sf/man/st_nearest_feature.Rd | 2 sf-1.0-8/sf/man/st_nearest_points.Rd | 2 sf-1.0-8/sf/man/st_read.Rd | 9 sf-1.0-8/sf/man/st_sample.Rd | 7 sf-1.0-8/sf/man/st_transform.Rd | 16 sf-1.0-8/sf/man/st_write.Rd | 14 sf-1.0-8/sf/man/tidyverse.Rd | 176 ++ sf-1.0-8/sf/man/valid.Rd | 8 sf-1.0-8/sf/src/Makevars.ucrt | 5 sf-1.0-8/sf/src/Makevars.win | 12 sf-1.0-8/sf/src/RcppExports.cpp | 64 - sf-1.0-8/sf/src/gdal_read.cpp | 7 sf-1.0-8/sf/src/gdal_utils.cpp | 36 sf-1.0-8/sf/src/geos.cpp | 41 sf-1.0-8/sf/src/proj.cpp | 54 sf-1.0-8/sf/src/sfc-sfg.cpp |only sf-1.0-8/sf/src/stars.cpp | 10 sf-1.0-8/sf/tests/aggregate.R | 20 sf-1.0-8/sf/tests/aggregate.Rout.save | 33 sf-1.0-8/sf/tests/crs.R | 18 sf-1.0-8/sf/tests/crs.Rout.save | 55 sf-1.0-8/sf/tests/dist.R | 19 sf-1.0-8/sf/tests/dist.Rout.save | 33 sf-1.0-8/sf/tests/dplyr.R | 113 - sf-1.0-8/sf/tests/dplyr.Rout.save | 368 +---- sf-1.0-8/sf/tests/geos.R | 4 sf-1.0-8/sf/tests/graticule.R | 6 sf-1.0-8/sf/tests/graticule.Rout.save | 101 - sf-1.0-8/sf/tests/grid.R | 14 sf-1.0-8/sf/tests/grid.Rout.save | 42 sf-1.0-8/sf/tests/maps.R | 19 sf-1.0-8/sf/tests/maps.Rout.save | 100 - sf-1.0-8/sf/tests/plot.R | 4 sf-1.0-8/sf/tests/plot.Rout.save | 260 +--- sf-1.0-8/sf/tests/read.Rout.save | 30 sf-1.0-8/sf/tests/roundtrip.R | 25 sf-1.0-8/sf/tests/roundtrip.Rout.save | 99 - sf-1.0-8/sf/tests/s2.Rout.save | 8 sf-1.0-8/sf/tests/sfc.R | 19 sf-1.0-8/sf/tests/sfc.Rout.save | 139 -- sf-1.0-8/sf/tests/spatstat.R | 3 sf-1.0-8/sf/tests/spatstat.Rout.save | 405 +----- sf-1.0-8/sf/tests/stars.R | 2 sf-1.0-8/sf/tests/stars.Rout.save | 12 sf-1.0-8/sf/tests/testthat.R | 8 sf-1.0-8/sf/tests/testthat/test_crs.R | 2 sf-1.0-8/sf/tests/testthat/test_sf.R | 3 sf-1.0-8/sf/tests/testthat/test_sp.R | 6 sf-1.0-8/sf/tests/testthat/test_tidy.R | 30 sf-1.0-8/sf/tests/testthat/test_wkb.R | 1 sf-1.0-8/sf/tests/testthat/test_write.R | 9 sf-1.0-8/sf/vignettes/sf5.Rmd | 2 112 files changed, 4330 insertions(+), 3278 deletions(-)
Title: USGS ScienceBase Tools
Description: Tools for interacting with U.S. Geological Survey ScienceBase
<https://www.sciencebase.gov> interfaces. ScienceBase is a data cataloging and
collaborative data management platform. Functions included for querying
ScienceBase, and creating and fetching datasets.
Author: David Blodgett [cre],
Luke Winslow [aut],
Scott Chamberlain [ctb],
Alison Appling [ctb],
Jordan Read [ctb]
Maintainer: David Blodgett <dblodgett@usgs.gov>
Diff between sbtools versions 1.1.18 dated 2022-05-26 and 1.1.19 dated 2022-07-14
DESCRIPTION | 8 MD5 | 88 ++++---- NEWS.md | 183 ++++++++-------- R/AAA.R | 96 ++++---- R/REST_helpers.R | 352 ++++++++++++++++---------------- R/authenticate_sb.R | 228 ++++++++++---------- R/current_session.R | 42 +-- R/folder_create.R | 2 R/gql_helpers.R | 135 ++++++------ R/identifier_exists.R | 56 ++--- R/item_exists.R | 58 ++--- R/item_file_download.R | 192 ++++++++--------- R/item_get.R | 84 +++---- R/item_get_fields.R | 54 ++-- R/item_list_files.R | 320 ++++++++++++++--------------- R/item_rename_files.R | 80 +++---- R/item_replace_files.R | 56 ++--- R/item_rm.R | 84 +++---- R/item_rm_files.R | 110 +++++----- R/item_update_identifier.R | 176 ++++++++-------- R/item_upload_files.R | 428 +++++++++++++++++++-------------------- R/query_item_identifier.R | 174 +++++++-------- R/query_sb.R | 338 +++++++++++++++--------------- R/query_sb_datatype.R | 124 +++++------ R/query_sb_date.R | 87 +++---- R/query_sb_doi.R | 68 +++--- R/query_sb_spatial.R | 108 ++++----- R/query_sb_text.R | 54 ++-- R/sb_item.R | 140 ++++++------ R/sb_ping.R | 52 ++-- R/sbtools-package.R | 76 +++--- R/session_age.R | 76 +++--- R/session_details.R | 98 ++++---- R/session_logout.R | 42 +-- R/session_renew.R | 170 +++++++-------- R/session_validate.R | 98 ++++---- R/set_endpoint.R | 104 ++++----- R/user_id.R | 56 ++--- README.md | 246 +++++++++++----------- man/item_get.Rd | 2 tests/testthat/test-REST.R | 144 ++++++------- tests/testthat/test-auth.R | 376 +++++++++++++++++----------------- tests/testthat/test-expiration.R | 72 +++--- tests/testthat/test-list_files.R | 26 +- tests/testthat/test_examples.R | 288 +++++++++++++------------- 45 files changed, 2919 insertions(+), 2932 deletions(-)
Title: Graphical Difference Testing
Description: Functions for performing graphical difference testing.
Differences are generated between raster images.
Comparisons can be performed between different package
versions and between different R versions.
Author: Paul Murrell
Maintainer: Paul Murrell <paul@stat.auckland.ac.nz>
Diff between gdiff versions 0.2-3 dated 2022-05-27 and 0.2-4 dated 2022-07-14
DESCRIPTION | 6 +- MD5 | 13 +++-- NAMESPACE | 1 R/compare.R | 3 - R/pdf.R |only inst/NEWS.Rd | 5 ++ inst/regression-tests/test.R | 106 +++++++++++++++++++++++-------------------- man/samePDF.Rd |only tests |only 9 files changed, 77 insertions(+), 57 deletions(-)
Title: Implementation of 2D Correlation Analysis in R
Description: Implementation of two-dimensional (2D) correlation analysis based
on the Fourier-transformation approach described by Isao Noda (I. Noda
(1993) <DOI:10.1366/0003702934067694>). Additionally there are two plot
functions for the resulting correlation matrix: The first one creates
colored 2D plots, while the second one generates 3D plots.
Author: Robert Geitner [cre, aut],
Robby Fritzsch [aut],
Thomas Bocklitz [aut],
Juergen Popp [ctb, cph]
Maintainer: Robert Geitner <robert.geitner@tu-ilmenau.de>
Diff between corr2D versions 1.0.2 dated 2021-01-08 and 1.0.3 dated 2022-07-14
DESCRIPTION | 19 ++++++++++--------- MD5 | 20 ++++++++++---------- NEWS.md | 15 ++++++++++----- R/codys2d.R | 4 ++-- R/corr2d_plot.R | 2 +- R/corr2t2d.R | 2 +- README.md | 53 ++++++++++++++++++++++++++++++++++++----------------- build/vignette.rds |binary man/codis2d.Rd | 4 ++-- man/corr2t2d.Rd | 2 +- man/plot_corr2d.Rd | 2 +- 11 files changed, 74 insertions(+), 49 deletions(-)
Title: Support Functions and Datasets for Venables and Ripley's MASS
Description: Functions and datasets to support Venables and Ripley,
"Modern Applied Statistics with S" (4th edition, 2002).
Author: Brian Ripley [aut, cre, cph],
Bill Venables [ctb],
Douglas M. Bates [ctb],
Kurt Hornik [trl] ,
Albrecht Gebhardt [trl] ,
David Firth [ctb]
Maintainer: Brian Ripley <ripley@stats.ox.ac.uk>
Diff between MASS versions 7.3-57.2 dated 2022-07-10 and 7.3-58 dated 2022-07-14
ChangeLog | 18 ++++++-- DESCRIPTION | 12 ++--- MD5 | 65 +++++++++++++++--------------- NAMESPACE | 5 +- R/glmmPQL.R | 56 ++++++++++++++++++++------ inst/scripts/ch11.R | 3 - inst/scripts/ch13.R | 14 +++--- inst/scripts/ch15.R | 8 +-- man/Animals.Rd | 9 +--- man/Cars93.Rd | 5 -- man/Insurance.Rd | 5 -- man/Rubber.Rd | 5 -- man/Traffic.Rd | 5 -- man/UScereal.Rd | 5 -- man/UScrime.Rd | 5 -- man/accdeaths.Rd | 5 -- man/biopsy.Rd | 5 -- man/cabbages.Rd | 5 -- man/cov.trob.Rd | 5 -- man/drivers.Rd | 5 -- man/eagles.Rd | 5 -- man/genotype.Rd | 5 -- man/ginv.Rd | 7 +-- man/glmmPQL.Rd | 55 +++++++++++++++---------- man/immer.Rd | 7 +-- man/mammals.Rd | 5 -- man/mcycle.Rd | 5 -- man/negative.binomial.Rd | 5 -- man/snails.Rd | 5 -- man/steam.Rd | 5 -- man/survey.Rd | 6 +- tests/Examples/MASS-Ex.Rout.save | 84 ++++++++++++++++++++++++++++++++++++++- tests/confint.R | 1 tests/glmmPQL.R |only 34 files changed, 281 insertions(+), 159 deletions(-)
Title: Bayesian Modeling of Spatio-Temporal Data with R
Description: Fits, validates and compares a number of Bayesian models for
spatial and space time point referenced and areal unit data. Model fitting
is done using several packages: 'rstan', 'INLA', 'spBayes', 'spTimer',
'spTDyn', 'CARBayes' and 'CARBayesST'. Model comparison is performed using
the DIC and WAIC, and K-fold cross-validation where the user is free
to select their own subset of data rows for validation. Sahu (2022)
<doi:10.1201/9780429318443> describes the methods in detail.
Author: Sujit K. Sahu [aut, cre] ,
Duncan P. Lee [aut],
K. Shuvo Bakar [aut]
Maintainer: Sujit K. Sahu <S.K.Sahu@soton.ac.uk>
Diff between bmstdr versions 0.2.2 dated 2022-06-21 and 0.3.0 dated 2022-07-14
DESCRIPTION | 13 MD5 | 25 R/Bcartime.R | 353 +++++++--- R/sp_all.R | 36 - R/sptime_all.R | 70 + R/utilities.R | 29 build/partial.rdb |binary build/vignette.rds |binary inst/doc/bmstdr-vig_bookdown.html | 60 - inst/examples/bcar_examples.R | 47 - inst/examples/bcar_examples_no_inla.R |only inst/full_vignette_code/bmstdr_code_to_reproduce_tables_and_graphs.R | 24 man/Bcartime.Rd | 64 - man/obs_v_pred_plot.Rd | 10 14 files changed, 470 insertions(+), 261 deletions(-)
Title: An R Package for Integrative Analysis of Quantitative Trait
Locus Data of 'GTEx'
Description: User can query, download, and visualize of molecular quantitative trait locus and gene expression data from public resources through the application programming interface <https://gtexportal.org/home/api-docs/index.html> of 'GTEx'.
Author: Ruofan Ding [aut, cre],
Xudong Zou [aut, ctb],
Yangmei Qin [aut, ctb],
Gao Wang [aut, ctb],
Lei Li [aut, ctb, cph]
Maintainer: Ruofan Ding <dingruofan1@foxmail.com>
Diff between xQTLbiolinks versions 1.0.0 dated 2022-06-28 and 1.1.1 dated 2022-07-14
DESCRIPTION | 9 MD5 | 67 +-- NEWS.md |only R/analyze.R | 198 ++++++---- R/internal_dealWithGencode.R | 1 R/visualize.R | 14 R/xQTLbiolinks.R | 36 + README.md | 34 + data/example_Coloc_colocResultAll.rda |binary data/example_Coloc_colocResultsig.rda |binary data/example_Coloc_gwasDF.rda |binary data/example_Coloc_hyprcolocResultAll.rda |only data/example_Coloc_sentinelSNP.rda |binary inst/doc/Colocalization_analysis_with_xQTLbiolinks.R | 30 + inst/doc/Colocalization_analysis_with_xQTLbiolinks.Rmd | 58 ++- inst/doc/Colocalization_analysis_with_xQTLbiolinks.html | 291 +++++++++------- inst/doc/Quick_start.R | 4 inst/doc/Quick_start.Rmd | 16 inst/doc/Quick_start.html | 56 +-- inst/doc/eQTL_Specificity.Rmd | 3 inst/doc/eQTL_Specificity.html | 3 inst/doc/visualization.R | 8 inst/doc/visualization.Rmd | 8 inst/doc/visualization.html | 3 man/example_Coloc_colocResultAll.Rd | 7 man/example_Coloc_colocResultsig.Rd | 8 man/example_Coloc_gwasDF.Rd | 2 man/example_Coloc_hyprcolocResultAll.Rd |only man/example_Coloc_sentinelSNP.Rd | 2 man/xQTLanalyze_coloc.Rd | 17 man/xQTLanalyze_getSentinelSnp.Rd | 10 man/xQTLanalyze_getTraits.Rd | 2 vignettes/Colocalization_analysis_with_xQTLbiolinks.Rmd | 58 ++- vignettes/Quick_start.Rmd | 16 vignettes/eQTL_Specificity.Rmd | 3 vignettes/visualization.Rmd | 8 36 files changed, 617 insertions(+), 355 deletions(-)
More information about trouBBlme4SolveR at CRAN
Permanent link
Title: Non-Negative Tensor Decomposition
Description: Some functions for performing non-negative matrix factorization, non-negative CANDECOMP/PARAFAC (CP) decomposition, non-negative Tucker decomposition, and generating toy model data. See Andrzej Cichock et al (2009) and the reference section of GitHub README.md <https://github.com/rikenbit/nnTensor>, for details of the methods.
Author: Koki Tsuyuzaki [aut, cre],
Manabu Ishii [aut],
Itoshi Nikaido [aut]
Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
Diff between nnTensor versions 1.1.7 dated 2022-06-17 and 1.1.8 dated 2022-07-14
DESCRIPTION | 12 ++++++------ MD5 | 39 +++++++++++++++++++++------------------ NAMESPACE | 3 ++- R/NMF.R | 2 +- R/NMTF.R |only R/NTD.R | 2 +- R/NTF.R | 2 +- R/jNMF.R | 2 +- R/nnTensor-internal.R | 2 +- R/siNMF.R | 4 ++-- README.md | 1 + build/partial.rdb |binary inst/NEWS | 5 +++++ man/GabrielNMF.Rd | 3 ++- man/NMF.Rd | 5 +++-- man/NMTF.Rd |only man/NTD.Rd | 7 ++++--- man/NTF.Rd | 4 ++-- man/jNMF.Rd | 7 ++++--- man/siNMF.Rd | 5 +++-- tests/testthat.R | 1 + tests/testthat/test_NMTF.R |only 22 files changed, 61 insertions(+), 45 deletions(-)
Title: A Tool for 'Covariate'-Sensitive Longitudinal Analysis on
'omics' Data
Description: This tool takes longitudinal dataset as input and analyzes if there is significant
change of the features over time (a proxy for treatments), while detects and controls
for 'covariates' simultaneously. 'LongDat' is able to take in several data types as input,
including count, proportion, binary, ordinal and continuous data. The output table contains
p values, effect sizes and 'covariates' of each feature, making the downstream analysis easy.
Author: Chia-Yu Chen [aut, cre] ,
Sofia Forslund [ctb]
Maintainer: Chia-Yu Chen <Chia-Yu.Chen@mdc-berlin.de>
Diff between LongDat versions 1.0.5 dated 2022-06-21 and 1.1.0 dated 2022-07-14
DESCRIPTION | 6 ++-- MD5 | 34 ++++++++++++------------- NEWS.md | 35 ++++++++++---------------- R/NuModelTest_cont.R | 23 +++++++++++++++-- R/NuModelTest_disc.R | 24 +++++++++++++++--- R/final_result_summarize_cont.R | 2 + R/final_result_summarize_disc.R | 2 + R/longdat_cont.R | 48 ++++++++++++++++++++++++++++++------ R/longdat_disc.R | 29 ++++++++++++++++++++- inst/WORDLIST | 4 ++- inst/doc/LongDat_cont_tutorial.Rmd | 2 - inst/doc/LongDat_cont_tutorial.html | 2 - inst/doc/LongDat_disc_tutorial.Rmd | 2 - inst/doc/LongDat_disc_tutorial.html | 2 - man/longdat_cont.Rd | 8 ++++++ man/longdat_disc.Rd | 8 ++++++ vignettes/LongDat_cont_tutorial.Rmd | 2 - vignettes/LongDat_disc_tutorial.Rmd | 2 - 18 files changed, 171 insertions(+), 64 deletions(-)
Title: Tools to Analyze the Thermal Reaction Norm of Embryo Growth
Description: Tools to analyze the embryo growth and the sexualisation thermal reaction norms. See <doi:10.7717/peerj.8451> for tsd functions; see <doi:10.1016/j.jtherbio.2014.08.005> for thermal reaction norm of embryo growth.
Author: Marc Girondot <marc.girondot@gmail.com>
Maintainer: Marc Girondot <marc.girondot@gmail.com>
Diff between embryogrowth versions 8.5 dated 2022-05-28 and 8.6 dated 2022-07-14
DESCRIPTION | 15 +++++++-------- MD5 | 38 +++++++++++++++++++------------------- NEWS | 9 ++++++++- R/HatchingSuccess.fit.R | 34 ++++++++++++++++++++++++++++++++++ R/HatchingSuccess.lnL.R | 3 ++- R/HatchingSuccess.model.R | 19 ++++++++++++++++++- R/HatchingSuccess.predict.R | 31 +++++++++++++++---------------- R/MovingIncubation.R | 2 +- R/P_TRT.R | 16 ++++++++-------- R/embryogrowth-package.R | 4 ++-- R/plot.HatchingSuccess.R | 2 +- R/plotR.R | 4 ++-- data/DatabaseNestingArea.rda |binary data/DatabaseTSD.rda |binary data/TSP.list.rda |binary data/stages.rda |binary man/HatchingSuccess.fit.Rd | 34 ++++++++++++++++++++++++++++++++++ man/HatchingSuccess.lnL.Rd | 3 ++- man/embryogrowth-package.Rd | 4 ++-- man/plotR.Rd | 4 ++-- 20 files changed, 157 insertions(+), 65 deletions(-)
Title: Count Transformation Models
Description: Count transformation models featuring
parameters interpretable as discrete hazard ratios, odds ratios,
reverse-time discrete hazard ratios, or transformed expectations.
An appropriate data transformation for a count outcome and
regression coefficients are simultaneously estimated by maximising
the exact discrete log-likelihood using the computational framework
provided in package 'mlt', technical details are given in
Siegfried & Hothorn (2020) <DOI:10.1111/2041-210X.13383>.
The package also contains an experimental implementation of
multivariate count transformation models with an application
to multi-species distribution models <arXiv:2201.13095>.
Author: Sandra Siegfried [aut, cre] ,
Luisa Barbanti [aut] ,
Torsten Hothorn [aut]
Maintainer: Sandra Siegfried <sandra.siegfried@uzh.ch>
Diff between cotram versions 0.4-0 dated 2022-07-07 and 0.4-1 dated 2022-07-14
DESCRIPTION | 8 ++-- MD5 | 12 +++---- inst/NEWS.Rd | 8 ++++ inst/doc/cotram.pdf |binary man/cotram-methods.Rd | 10 +++--- man/mcotram.Rd | 15 +++++++-- tests/Examples/cotram-Ex.Rout.save | 61 +++++++++++++++---------------------- 7 files changed, 60 insertions(+), 54 deletions(-)
Title: Deriving Expressions of Joint Interventional Distributions and
Transport Formulas in Causal Models
Description: Functions for identification and transportation of causal effects. Provides a conditional causal effect identification algorithm (IDC) by Shpitser, I. and Pearl, J. (2006) <http://ftp.cs.ucla.edu/pub/stat_ser/r329-uai.pdf>, an algorithm for transportability from multiple domains with limited experiments by Bareinboim, E. and Pearl, J. (2014) <http://ftp.cs.ucla.edu/pub/stat_ser/r443.pdf>, and a selection bias recovery algorithm by Bareinboim, E. and Tian, J. (2015) <http://ftp.cs.ucla.edu/pub/stat_ser/r445.pdf>. All of the previously mentioned algorithms are based on a causal effect identification algorithm by Tian , J. (2002) <http://ftp.cs.ucla.edu/pub/stat_ser/r309.pdf>.
Author: Santtu Tikka [aut, cre]
Maintainer: Santtu Tikka <santtuth@gmail.com>
Diff between causaleffect versions 1.3.13 dated 2021-06-14 and 1.3.15 dated 2022-07-14
DESCRIPTION | 20 +------ MD5 | 32 +++++------ NEWS | 7 ++ R/dSep.R | 121 +++++++++++++++----------------------------- R/id.R | 7 +- R/idc.R | 8 +- R/latent.projection.R | 10 +-- R/pid.R | 9 +-- R/sc.components.R | 4 - R/soid.R | 6 +- R/tr.target.R | 6 +- R/trmz.R | 8 +- R/trmz_ex.R | 10 +-- R/trso.R | 8 +- build/vignette.rds |binary inst/doc/causaleffect.pdf |binary inst/doc/simplification.pdf |binary 17 files changed, 109 insertions(+), 147 deletions(-)
Title: Stepwise Procedure for Beta Regression Models
Description: Starting from a Beta Regression Model, it provides a stepwise
procedure to select the linear predictor.
Author: Sergio Garofalo
Maintainer: Sergio Garofalo <sergio.garofalo96@gmail.com>
Diff between StepBeta versions 2.0.0 dated 2022-07-05 and 2.0.1 dated 2022-07-14
DESCRIPTION | 6 +++--- MD5 | 6 +++--- R/Step_Aic_beta_regression.R | 13 +++++++++++-- man/StepBeta.Rd | 12 ++++++++++-- 4 files changed, 27 insertions(+), 10 deletions(-)
Title: Multivariate Data Analysis for Chemometrics
Description: Projection based methods for preprocessing,
exploring and analysis of multivariate data used in chemometrics.
S. Kucheryavskiy (2020) <doi: 10.1016/j.chemolab.2020.103937>.
Author: Sergey Kucheryavskiy
Maintainer: Sergey Kucheryavskiy <svkucheryavski@gmail.com>
Diff between mdatools versions 0.12.0 dated 2021-09-13 and 0.13.0 dated 2022-07-14
DESCRIPTION | 10 MD5 | 82 ++++--- NAMESPACE | 3 NEWS.md | 156 ++++++++------- R/classres.R | 10 R/crossval.R | 24 +- R/defaults.R | 11 + R/ipls.R | 10 R/ldecomp.R | 55 ++--- R/mcrpure.R | 9 R/mdaplot.R | 7 R/mdaplotg.R | 2 R/misc.R | 8 R/pca.R | 21 +- R/pcv.R | 11 - R/plotseries.R | 9 R/pls.R | 433 +++++++++++++++++++++++++++++++----------- R/plsdares.R | 2 R/plsres.R | 2 R/prep.R | 123 +++++++---- R/randtest.R | 8 R/regcoeffs.R | 4 R/regmodel.R | 51 ++++ R/regres.R | 6 R/simca.R | 44 +--- R/simcam.R | 2 README.md | 7 man/mdaplot.formatValues.Rd | 2 man/plotLoadings.pca.Rd | 2 man/plotRMSERatio.Rd |only man/plotRMSERatio.regmodel.Rd |only man/plotScores.ldecomp.Rd | 2 man/plotScores.pca.Rd | 2 man/plotXLoadings.pls.Rd | 2 man/plotXScores.pls.Rd | 4 man/plotXYScores.pls.Rd | 2 man/pls.Rd | 1 man/pls.getpredictions.Rd |only man/pls.getxdecomp.Rd |only man/pls.getxscores.Rd |only man/pls.getydecomp.Rd |only man/pls.getyscores.Rd |only man/pls.simplsold.Rd |only man/prep.alsbasecorr.Rd | 4 man/prep.norm.Rd | 16 + man/randtest.Rd | 4 46 files changed, 739 insertions(+), 412 deletions(-)
Title: Handling HL7 FHIR Resources in R
Description: Useful tools for conveniently downloading FHIR resources in xml format
and converting them to R data.frames. The package uses FHIR-search to download bundles
from a FHIR server, provides functions to save and read xml-files containing such bundles
and allows flattening the bundles to data.frames using XPath expressions.
Author: Thomas Peschel [aut],
Julia Palm [aut, cre] ,
Jens Przybilla [aut],
Frank Meineke [aut]
Maintainer: Julia Palm <julia.palm@med.uni-jena.de>
Diff between fhircrackr versions 1.0.1 dated 2021-06-17 and 2.0.0 dated 2022-07-14
fhircrackr-1.0.1/fhircrackr/inst/doc/downloadResources.pdf |only fhircrackr-1.0.1/fhircrackr/inst/doc/fhircrackr_intro.pdf |only fhircrackr-1.0.1/fhircrackr/inst/doc/flattenResources.pdf |only fhircrackr-1.0.1/fhircrackr/tests/testthat/MyDirectory |only fhircrackr-1.0.1/fhircrackr/tests/testthat/test_001.R |only fhircrackr-1.0.1/fhircrackr/tests/testthat/test_fhir_style.R |only fhircrackr-1.0.1/fhircrackr/vignettes/downloadResources.html |only fhircrackr-1.0.1/fhircrackr/vignettes/fhircrackr_intro.html |only fhircrackr-1.0.1/fhircrackr/vignettes/flattenResources.html |only fhircrackr-2.0.0/fhircrackr/DESCRIPTION | 42 fhircrackr-2.0.0/fhircrackr/MD5 | 255 - fhircrackr-2.0.0/fhircrackr/NAMESPACE | 107 fhircrackr-2.0.0/fhircrackr/NEWS.md | 240 - fhircrackr-2.0.0/fhircrackr/R/build_resources.R |only fhircrackr-2.0.0/fhircrackr/R/design.R | 752 +-- fhircrackr-2.0.0/fhircrackr/R/download_resources.R | 2012 +++++----- fhircrackr-2.0.0/fhircrackr/R/fhir_body.R | 255 - fhircrackr-2.0.0/fhircrackr/R/fhir_bundle.R | 214 - 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fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_melt.R |only fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_resource_type.R | 30 fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_save.R |only fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_search.R |only fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_table_description.R | 156 fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_table_list.R | 133 fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_url.R | 94 fhircrackr-2.0.0/fhircrackr/tests/testthat/test_fhir_xpath_expression.R | 48 fhircrackr-2.0.0/fhircrackr/vignettes/MyProject |only fhircrackr-2.0.0/fhircrackr/vignettes/downloadResources.Rmd | 1216 +++--- fhircrackr-2.0.0/fhircrackr/vignettes/fhircrackr_intro.Rmd | 1057 ++--- fhircrackr-2.0.0/fhircrackr/vignettes/flattenResources.Rmd | 1009 ++--- fhircrackr-2.0.0/fhircrackr/vignettes/recreateResources.Rmd |only 146 files changed, 13562 insertions(+), 10686 deletions(-)
Title: Depth Importance in Precision Medicine (DIPM) Method
Description: An implementation by Chen, Li, and Zhang (2022) <doi: 10.1093/bioadv/vbac041> of the Depth Importance in Precision Medicine (DIPM) method
in Chen and Zhang (2022) <doi:10.1093/biostatistics/kxaa021> and Chen and
Zhang (2020) <doi:10.1007/978-3-030-46161-4_16>. The DIPM method is a classification
tree that searches for subgroups with especially poor or strong performance in a given treatment group.
Author: Cai Li [aut, cre],
Victoria Chen [aut],
Heping Zhang [aut]
Maintainer: Cai Li <cai.li.stats@gmail.com>
Diff between dipm versions 1.7 dated 2022-05-18 and 1.8 dated 2022-07-14
DESCRIPTION | 14 +++++++------- MD5 | 20 ++++++++++---------- R/coxph_R_to_C.R | 12 ++++++------ R/coxph_R_to_C_multi.R | 12 ++++++------ R/dipm.R | 8 ++++---- R/lm_R_to_C.R | 12 ++++++------ R/node_dipm.R | 12 ++++++------ R/spmtree.R | 8 ++++---- man/dipm.Rd | 8 ++++---- man/node_dipm.Rd | 12 ++++++------ man/spmtree.Rd | 8 ++++---- 11 files changed, 63 insertions(+), 63 deletions(-)
Title: Data Quality Assessment for Process-Oriented Data
Description: Provides a variety of methods to identify data quality issues in process-oriented data, which are useful to verify data quality in a process mining context. Builds on the class for activity logs implemented in the package 'bupaR'. Methods to identify data quality issues either consider each activity log entry independently (e.g. missing values, activity duration outliers,...), or focus on the relation amongst several activity log entries (e.g. batch registrations, violations of the expected activity order,...).
Author: Niels Martin [aut, cre],
Greg Van Houdt [ctb],
Gert Janssenswillen [ctb]
Maintainer: Niels Martin <niels.martin@uhasselt.be>
Diff between daqapo versions 0.3.1 dated 2020-10-02 and 0.3.2 dated 2022-07-14
daqapo-0.3.1/daqapo/data/hospital_actlog.RData |only daqapo-0.3.2/daqapo/DESCRIPTION | 17 daqapo-0.3.2/daqapo/MD5 | 40 daqapo-0.3.2/daqapo/NAMESPACE | 3 daqapo-0.3.2/daqapo/R/detect_activity_frequency_violations.R | 3 daqapo-0.3.2/daqapo/R/detect_case_id_sequence.R | 14 daqapo-0.3.2/daqapo/R/detect_conditional_activity_presence_violations.R | 2 daqapo-0.3.2/daqapo/R/detect_duration_outliers.R | 4 daqapo-0.3.2/daqapo/R/detect_inactive_periods.R | 2 daqapo-0.3.2/daqapo/R/detect_missing_values.R | 4 daqapo-0.3.2/daqapo/R/detect_overlaps.R | 2 daqapo-0.3.2/daqapo/R/detect_similar_labels.R | 8 daqapo-0.3.2/daqapo/R/detect_unique_values.R | 2 daqapo-0.3.2/daqapo/R/detect_value_range_violations.R | 4 daqapo-0.3.2/daqapo/README.md | 2 daqapo-0.3.2/daqapo/build/vignette.rds |binary daqapo-0.3.2/daqapo/data/hospital_actlog.rda |only daqapo-0.3.2/daqapo/inst/doc/Introduction-to-DaQAPO.R | 12 daqapo-0.3.2/daqapo/inst/doc/Introduction-to-DaQAPO.Rmd | 17 daqapo-0.3.2/daqapo/inst/doc/Introduction-to-DaQAPO.html | 1320 ++++++---- daqapo-0.3.2/daqapo/man/detect_similar_labels.Rd | 8 daqapo-0.3.2/daqapo/vignettes/Introduction-to-DaQAPO.Rmd | 17 22 files changed, 904 insertions(+), 577 deletions(-)
Title: Mapas de las Divisiones Politicas y Administrativas de Chile
(Maps of the Political and Administrative Divisions of Chile)
Description: Mapas terrestres con topologias simplificadas. Estos mapas no
tienen precision geodesica, por lo que aplica el DFL-83 de 1979 de la Republica
de Chile y se consideran referenciales sin validez legal.
No se incluyen los territorios antarticos y bajo ningun evento estos mapas
significan que exista una cesion u ocupacion de territorios soberanos en
contra del Derecho Internacional por parte de Chile. Esta paquete esta
documentado intencionalmente en castellano asciificado para que funcione sin
problema en diferentes plataformas.
(Terrestrial maps with simplified toplogies. These maps lack geodesic
precision, therefore DFL-83 1979 of the Republic of Chile applies and are
considered to have no legal validity.
Antartic territories are excluded and under no event these maps mean
there is a cession or occupation of sovereign territories against International
Laws from Chile. This package was intentionally documented in asciified
spanish to make it work without problem on different platforms.)
Author: Mauricio Vargas [aut, cre],
Roberto Salas [ctb],
Joshua Kunst [ctb],
Juan Correa [dtc],
Ricardo Aravena [ths],
Pontificia Universidad Catolica de Chile [cph],
Instituto Nacional de Estadisticas [dtc],
Subsecretaria de Desarrollo Regional [dtc],
Bib [...truncated...]
Maintainer: Mauricio Vargas <mavargas11@uc.cl>
Diff between chilemapas versions 0.2 dated 2020-03-28 and 0.3.0 dated 2022-07-14
chilemapas-0.2/chilemapas/data/datalist |only chilemapas-0.2/chilemapas/inst/doc/basic-usage.R |only chilemapas-0.2/chilemapas/inst/doc/basic-usage.Rmd |only chilemapas-0.2/chilemapas/inst/doc/basic-usage.html |only chilemapas-0.2/chilemapas/vignettes/basic-usage.Rmd |only chilemapas-0.3.0/chilemapas/DESCRIPTION | 16 ++-- chilemapas-0.3.0/chilemapas/MD5 | 37 +++++----- chilemapas-0.3.0/chilemapas/NEWS.md |only chilemapas-0.3.0/chilemapas/R/administrative-maps.R | 9 -- chilemapas-0.3.0/chilemapas/R/political-maps.R | 6 - chilemapas-0.3.0/chilemapas/R/zzz.R |only chilemapas-0.3.0/chilemapas/build/vignette.rds |binary chilemapas-0.3.0/chilemapas/data/codigos_territoriales_16r.rda |only chilemapas-0.3.0/chilemapas/data/mapa_comunas.rda |binary chilemapas-0.3.0/chilemapas/data/mapa_zonas.rda |binary chilemapas-0.3.0/chilemapas/inst/doc/chilemapas.R |only chilemapas-0.3.0/chilemapas/inst/doc/chilemapas.Rmd |only chilemapas-0.3.0/chilemapas/inst/doc/chilemapas.html |only chilemapas-0.3.0/chilemapas/man/codigos_territoriales_16r.Rd |only chilemapas-0.3.0/chilemapas/man/generar_circunscripciones.Rd | 3 chilemapas-0.3.0/chilemapas/man/generar_distritos.Rd | 3 chilemapas-0.3.0/chilemapas/man/generar_provincias.Rd | 3 chilemapas-0.3.0/chilemapas/man/generar_regiones.Rd | 3 chilemapas-0.3.0/chilemapas/man/generar_servicios_salud.Rd | 3 chilemapas-0.3.0/chilemapas/tests/testthat/test-aggregation.R | 1 chilemapas-0.3.0/chilemapas/vignettes/chilemapas.Rmd |only 26 files changed, 39 insertions(+), 45 deletions(-)
Title: Create 'Ascii' Screen Casts from R Scripts
Description: Record 'asciicast' screen casts from R scripts. Convert them
to animated SVG images, to be used in 'README' files, or blog posts.
Includes 'asciinema-player' as an 'HTML' widget, and an 'asciicast'
'knitr' engine, to embed 'ascii' screen casts in 'Rmarkdown' documents.
Author: Gabor Csardi [aut, cre],
Romain Francois [aut],
Mario Nebl [aut] ,
Marcin Kulik [aut]
Maintainer: Gabor Csardi <csardi.gabor@gmail.com>
Diff between asciicast versions 1.0.0 dated 2019-12-13 and 2.0.0 dated 2022-07-14
asciicast-1.0.0/asciicast/R/lazyrmd.R |only asciicast-1.0.0/asciicast/R/record.R |only asciicast-1.0.0/asciicast/build |only asciicast-1.0.0/asciicast/inst/client.R |only asciicast-1.0.0/asciicast/inst/doc |only asciicast-1.0.0/asciicast/vignettes |only asciicast-2.0.0/asciicast/DESCRIPTION | 23 asciicast-2.0.0/asciicast/MD5 | 167 + asciicast-2.0.0/asciicast/NAMESPACE | 18 asciicast-2.0.0/asciicast/NEWS.md | 44 asciicast-2.0.0/asciicast/R/aaa-rstudio-detect.R |only asciicast-2.0.0/asciicast/R/asciicast.R | 108 asciicast-2.0.0/asciicast/R/embed.R |only asciicast-2.0.0/asciicast/R/errors.R | 1129 +++++++--- asciicast-2.0.0/asciicast/R/frames.R |only asciicast-2.0.0/asciicast/R/gif.R |only asciicast-2.0.0/asciicast/R/htmlwidget.R | 18 asciicast-2.0.0/asciicast/R/install-phantomjs.R |only asciicast-2.0.0/asciicast/R/knitr.R | 130 - asciicast-2.0.0/asciicast/R/onload.R | 48 asciicast-2.0.0/asciicast/R/parameters.R | 6 asciicast-2.0.0/asciicast/R/read.R | 8 asciicast-2.0.0/asciicast/R/record-output.R |only asciicast-2.0.0/asciicast/R/rstudio.R |only asciicast-2.0.0/asciicast/R/svg.R | 206 + asciicast-2.0.0/asciicast/R/utils.R | 79 asciicast-2.0.0/asciicast/R/write-json.R |only asciicast-2.0.0/asciicast/README.md | 106 asciicast-2.0.0/asciicast/inst/browserify.js | 1 asciicast-2.0.0/asciicast/inst/examples/Makefile |only asciicast-2.0.0/asciicast/inst/examples/asciicast.R | 33 asciicast-2.0.0/asciicast/inst/examples/asciicast.cast | 654 +++-- asciicast-2.0.0/asciicast/inst/examples/dplyr.R | 1 asciicast-2.0.0/asciicast/inst/examples/dplyr.cast | 921 ++++---- asciicast-2.0.0/asciicast/inst/examples/errors.R | 11 asciicast-2.0.0/asciicast/inst/examples/errors.cast | 436 ++- asciicast-2.0.0/asciicast/inst/examples/github-readme.Rmd | 43 asciicast-2.0.0/asciicast/inst/examples/github-readme.md | 33 asciicast-2.0.0/asciicast/inst/examples/hello.R | 3 asciicast-2.0.0/asciicast/inst/examples/hello.cast | 65 asciicast-2.0.0/asciicast/inst/examples/man/figures/README-/unnamed-chunk-4.svg | 2 asciicast-2.0.0/asciicast/inst/examples/man/figures/README-/unnamed-chunk-5.svg | 2 asciicast-2.0.0/asciicast/inst/examples/man/figures/README-/unnamed-chunk-6.svg |only asciicast-2.0.0/asciicast/inst/examples/man/figures/README-/unnamed-chunk-7.svg |only asciicast-2.0.0/asciicast/inst/examples/man/figures/README-/unnamed-chunk-8.svg |only asciicast-2.0.0/asciicast/inst/load-cast.js |only asciicast-2.0.0/asciicast/inst/page |only asciicast-2.0.0/asciicast/inst/renderer.js |only asciicast-2.0.0/asciicast/inst/svg-term.js.gz |binary asciicast-2.0.0/asciicast/man/asciicast-package.Rd | 6 asciicast-2.0.0/asciicast/man/asciicast_options.Rd |only asciicast-2.0.0/asciicast/man/asciicast_start_process.Rd | 37 asciicast-2.0.0/asciicast/man/asciinema_player.Rd | 5 asciicast-2.0.0/asciicast/man/default_theme.Rd | 2 asciicast-2.0.0/asciicast/man/figures/README-/unnamed-chunk-3.svg | 2 asciicast-2.0.0/asciicast/man/figures/README-/unnamed-chunk-5.svg | 2 asciicast-2.0.0/asciicast/man/figures/README-/unnamed-chunk-7.svg | 2 asciicast-2.0.0/asciicast/man/get_locales.Rd |only asciicast-2.0.0/asciicast/man/init_knitr_engine.Rd | 38 asciicast-2.0.0/asciicast/man/install_phantomjs.Rd |only asciicast-2.0.0/asciicast/man/load_frames.Rd |only asciicast-2.0.0/asciicast/man/read_cast.Rd | 2 asciicast-2.0.0/asciicast/man/record.Rd | 40 asciicast-2.0.0/asciicast/man/record_output.Rd |only asciicast-2.0.0/asciicast/man/write_gif.Rd |only asciicast-2.0.0/asciicast/man/write_json.Rd | 4 asciicast-2.0.0/asciicast/man/write_svg.Rd | 2 asciicast-2.0.0/asciicast/src |only asciicast-2.0.0/asciicast/tests/testthat |only asciicast-2.0.0/asciicast/tests/testthat.R | 14 70 files changed, 2981 insertions(+), 1470 deletions(-)
Title: General-Purpose Phase-Type Functions
Description: General implementation of core function from phase-type
theory. 'PhaseTypeR' can be used to model continuous and discrete
phase-type distributions, both univariate and multivariate. The
package includes functions for outputting the mean and (co)variance of
phase-type distributions; their density, probability and quantile
functions; functions for random draws; functions for
reward-transformation; and functions for plotting the distributions as
networks. For more information on these functions please refer to
Bladt and Nielsen (2017, ISBN: 978-1-4939-8377-3) and Campillo Navarro
(2019)
<https://orbit.dtu.dk/en/publications/order-statistics-and-multivariate-discrete-phase-type-distributio>.
Author: Iker Rivas-Gonzalez [aut, cre]
,
Asger Hobolth [aut],
Lars Noervang Andersen [aut],
Colin Guetemme [aut]
Maintainer: Iker Rivas-Gonzalez <ikerrivas96@gmail.com>
Diff between PhaseTypeR versions 1.0.2 dated 2022-02-10 and 1.0.3 dated 2022-07-14
DESCRIPTION | 8 MD5 | 48 +-- NAMESPACE | 6 NEWS.md | 9 R/DPH_functions.R | 17 - R/MDPH_functions.R | 10 R/MPH_functions.R | 10 R/PH_functions.R | 14 R/mean.R | 14 R/phase_type_to_network.R | 4 R/print.R |only R/reward_phase_type.R | 4 R/var.R | 13 README.md | 2 build/vignette.rds |binary inst/doc/PhaseTypeR.R | 2 inst/doc/PhaseTypeR.Rmd | 2 inst/doc/PhaseTypeR.html | 583 +++++++++++++++++++++++++++++++++------- inst/doc/a2_pop_gen_iker.html | 543 ++++++++++++++++++++++++++++++++----- inst/doc/a3_phasetypeR_SFS.R | 1 inst/doc/a3_phasetypeR_SFS.Rmd | 1 inst/doc/a3_phasetypeR_SFS.html | 352 +++++++++++++++++++++--- man/mean.Rd | 3 man/print.cont_phase_type.Rd |only vignettes/PhaseTypeR.Rmd | 2 vignettes/a3_phasetypeR_SFS.Rmd | 1 26 files changed, 1359 insertions(+), 290 deletions(-)
Title: Tools for Environmental Analyses, Ecotoxicology and Various R
Functions
Description: Contains miscellaneous functions useful for managing 'NetCDF' files (see <https://en.wikipedia.org/wiki/NetCDF>), get moon phase and time for sun rise and fall, tide level, analyse and reconstruct periodic time series of temperature with irregular sinusoidal pattern, show scales and wind rose in plot with change of color of text, Metropolis-Hastings algorithm for Bayesian MCMC analysis, plot graphs or boxplot with error bars, search files in disk by there names or their content, read the contents of all files from a folder at one time.
Author: Marc Girondot
Maintainer: Marc Girondot <marc.girondot@gmail.com>
Diff between HelpersMG versions 5.4 dated 2022-05-27 and 5.5 dated 2022-07-14
DESCRIPTION | 15 ++++++------- MD5 | 54 ++++++++++++++++++++++++----------------------- NAMESPACE | 3 +- NEWS | 8 ++++++ R/HelpersMG-package.R | 4 +-- R/pSnbinom.R | 2 - R/qSnbinom.R | 2 - R/qvlmer.R | 2 + R/r2norm.R | 3 +- R/rmnorm.R |only R/rnbinom_new.R | 1 R/sysdata.rda |binary inst/shiny/cutter/ui.R | 2 - man/HelpersMG-package.Rd | 4 +-- man/cutter.Rd | 7 +++++- man/dSnbinom.Rd | 2 - man/dbeta_new.Rd | 7 +++++- man/dcutter.Rd | 7 +++++- man/ggamma.Rd | 7 +++++- man/logLik.cutter.Rd | 7 +++++- man/pSnbinom.Rd | 17 +++++++++++--- man/plot.cutter.Rd | 7 +++++- man/print.cutter.Rd | 7 +++++- man/qSnbinom.Rd | 17 +++++++++++--- man/r2norm.Rd | 16 +++++++++++++ man/rSnbinom.Rd | 4 --- man/rcutter.Rd | 7 +++++- man/rmnorm.Rd |only man/rnbinom_new.Rd | 16 +++++++++++++ 29 files changed, 163 insertions(+), 65 deletions(-)
Title: Common Network Asset Indices Methodology (CNAIM)
Description: Implementation of the CNAIM standard in R. Contains a series of
algorithms which determine the probability of failure, consequences of
failure and monetary risk associated with electricity distribution
companies' assets such as transformers and cables. Results are visualized
in an easy-to-understand risk matrix.
Author: Emil Larsen [aut],
Kalle Hansen [aut],
Peter Larsen [aut],
Mohsin Vindhani [aut, cre]
Maintainer: Mohsin Vindhani <mohsin@utiligize.com>
Diff between CNAIM versions 2.1.0 dated 2022-06-18 and 2.1.1 dated 2022-07-14
DESCRIPTION | 12 MD5 | 327 ++++++++++++------ NAMESPACE | 93 +++++ R/cof_board_04kv.R |only R/cof_cables_04_10kv.R |only R/cof_ehv_cables.R | 22 + R/cof_ehv_fittings.R | 18 R/cof_ehv_switchgear.R | 57 ++- R/cof_hv_switchgear_distribution.R | 36 + R/cof_hv_switchgear_primary.R | 16 R/cof_lv_switchgear_and_other.R | 21 + R/cof_lv_ugb.R | 10 R/cof_ohl_cond.R | 24 + R/cof_ohl_cond_50kv.R |only R/cof_ohl_fittings_50kv.R |only R/cof_pillar_04kv.R |only R/cof_poles.R | 34 + R/cof_poles_ohl_support_50kv.R |only R/cof_relay.R |only R/cof_serviceline.R |only R/cof_sub_cables.R | 19 - R/cof_submarine_cables_10kv.R |only R/cof_submarine_cables_30_60kv.R |only R/cof_switchgear_30_60kv.R |only R/cof_switchgear_primary_10kv.R |only R/cof_switchgear_secondary_10kv.R |only R/cof_tower_ohl_support_50kv.R |only R/cof_towers.R | 27 + R/cof_transformer_30_60kv.R |only R/cof_transformers.R | 28 + R/plotplot.R |only R/pof_board_04kv.R |only R/pof_building.R |only R/pof_cables_04kv_pex.R |only R/pof_cables_10kv_oil.R |only R/pof_cables_10kv_pex.R |only R/pof_future_board_04kv.R |only R/pof_future_building.R |only R/pof_future_cables_04kv_pex.R |only R/pof_future_cables_10kv_oil.R |only R/pof_future_cables_10kv_pex.R |only R/pof_future_cables_132kv.R | 9 R/pof_future_cables_66_33kv.R | 7 R/pof_future_hv_poles.R |only R/pof_future_meter.R |only R/pof_future_ohl_cond_132_66_33kv.R | 15 R/pof_future_ohl_cond_50kv.R |only R/pof_future_ohl_fittings_50kv.R |only R/pof_future_pillar_04kv.R |only R/pof_future_poles_ohl_support_50kv.R |only R/pof_future_relay.R |only R/pof_future_rtu.R |only R/pof_future_serviceline.R |only R/pof_future_submarine_cables.R | 7 R/pof_future_submarine_cables_10kv_oil.R |only R/pof_future_submarine_cables_10kv_pex.R |only R/pof_future_submarine_cables_30_60kv_oil.R |only R/pof_future_submarine_cables_30_60kv_pex.R |only R/pof_future_switchgear_30_60kv.R |only R/pof_future_switchgear_primary_10kv.R |only R/pof_future_switchgear_secondary_10kv.R |only R/pof_future_transformer_04_10kv.R |only R/pof_future_transformer_11_20kv.R | 16 R/pof_future_transformer_132kv.R | 77 ++-- R/pof_future_transformer_30_60kv.R |only R/pof_future_transformer_33_66kv.R | 84 ++-- R/pof_hv_poles.R | 1 R/pof_meter.R |only R/pof_switchgear_primary_10kv.R |only R/pof_switchgear_secondary_10kv.R |only R/pof_tower_ohl_support_50kv.R |only R/pof_transformer_04_10kv.R |only R/pof_transformer_11_20kv.R | 9 R/pof_transformer_132kv.R | 5 R/pof_transformer_30_60kv.R |only R/pof_transformer_33_66kv.R | 84 ++-- R/risk_calculation.R | 52 ++ R/sysdata.rda |binary man/environmental_cof_board_04kv.Rd |only man/environmental_cof_cables_04_10kv.Rd |only man/environmental_cof_ehv_cables.Rd | 6 man/environmental_cof_ehv_fittings.Rd | 4 man/environmental_cof_ehv_switchgear.Rd | 13 man/environmental_cof_hv_switchgear_distribution.Rd | 11 man/environmental_cof_hv_switchgear_primary.Rd | 7 man/environmental_cof_lv_switchgear_and_other.Rd | 5 man/environmental_cof_lv_ugb.Rd | 3 man/environmental_cof_ohl_cond.Rd | 9 man/environmental_cof_ohl_cond_50kv.Rd |only man/environmental_cof_ohl_fittings_50kv.Rd |only man/environmental_cof_pillar_04kv.Rd |only man/environmental_cof_poles.Rd | 9 man/environmental_cof_poles_ohl_support_50kv.Rd |only man/environmental_cof_relay.Rd |only man/environmental_cof_serviceline.Rd |only man/environmental_cof_sub_cables.Rd | 9 man/environmental_cof_submarine_10kv.Rd |only man/environmental_cof_submarine_30_60kv.Rd |only man/environmental_cof_switchgear_30_60kv.Rd |only man/environmental_cof_switchgear_primary_10kv.Rd |only man/environmental_cof_switchgear_secondary_10kv.Rd |only man/environmental_cof_tower_ohl_support_50kv.Rd |only man/environmental_cof_towers.Rd | 9 man/environmental_cof_transformer_30_60kv.Rd |only man/environmental_cof_transformers.Rd | 5 man/financial_cof_board_04kv.Rd |only man/financial_cof_cables_04_10kv.Rd |only man/financial_cof_ehv_cables.Rd | 6 man/financial_cof_ehv_fittings.Rd | 10 man/financial_cof_ehv_switchgear.Rd | 16 man/financial_cof_hv_switchgear_distribution.Rd | 10 man/financial_cof_hv_switchgear_primary.Rd | 7 man/financial_cof_lv_switchgear_and_other.Rd | 12 man/financial_cof_lv_ugb.Rd | 3 man/financial_cof_ohl_cond.Rd | 7 man/financial_cof_ohl_cond_50kv.Rd |only man/financial_cof_ohl_fittings_50kv.Rd |only man/financial_cof_pillar_04kv.Rd |only man/financial_cof_poles.Rd | 11 man/financial_cof_poles_ohl_support_50kv.Rd |only man/financial_cof_relay.Rd |only man/financial_cof_serviceline.Rd |only man/financial_cof_sub_cables.Rd | 4 man/financial_cof_submarine_cables_10kv.Rd |only man/financial_cof_submarine_cables_30_60kv.Rd |only man/financial_cof_switchgear_30_60kv.Rd |only man/financial_cof_switchgear_primary_10kv.Rd |only man/financial_cof_switchgear_secondary_10kv.Rd |only man/financial_cof_tower_ohl_support_50kv.Rd |only man/financial_cof_towers.Rd | 12 man/financial_cof_transformer_30_60kv.Rd |only man/financial_cof_transformers.Rd | 5 man/network_cof_board_04kv.Rd |only man/network_cof_cables_04_10kv.Rd |only man/network_cof_ehv_cables.Rd | 6 man/network_cof_ehv_fittings.Rd | 4 man/network_cof_ehv_pole.Rd | 6 man/network_cof_ehv_sub_cable.Rd | 3 man/network_cof_ehv_switchgear.Rd | 13 man/network_cof_hv_lv_poles.Rd | 6 man/network_cof_hv_sub_cables.Rd | 3 man/network_cof_hv_switchgear_distribution.Rd | 5 man/network_cof_hv_switchgear_primary.Rd | 4 man/network_cof_lv_switchgear_and_other.Rd | 5 man/network_cof_lv_ugb.Rd | 3 man/network_cof_ohl_cond.Rd | 4 man/network_cof_ohl_cond_50kv.Rd |only man/network_cof_ohl_fittings_50kv.Rd |only man/network_cof_pillar_04kv.Rd |only man/network_cof_poles_ohl_support_50kv.Rd |only man/network_cof_relay.Rd |only man/network_cof_serviceline.Rd |only man/network_cof_submarine_cables_10kv.Rd |only man/network_cof_submarine_cables_30_60kv.Rd |only man/network_cof_switchgear_30_60kv.Rd |only man/network_cof_switchgear_primary_10kv.Rd |only man/network_cof_switchgear_secondary_10kv.Rd |only man/network_cof_tower.Rd | 4 man/network_cof_tower_ohl_support_50kv.Rd |only man/network_cof_transformer_30_60kv.Rd |only man/network_cof_transformers.Rd | 5 man/plot_pof.Rd |only man/pof_board_04kv.Rd |only man/pof_building.Rd |only man/pof_cables_04kv_pex.Rd |only man/pof_cables_10kv_oil.Rd |only man/pof_cables_10kv_pex.Rd |only man/pof_future_board_04kv.Rd |only man/pof_future_building.Rd |only man/pof_future_cables_04kv_pex.Rd |only man/pof_future_cables_10kv_oil.Rd |only man/pof_future_cables_10kv_pex.Rd |only man/pof_future_meter.Rd |only man/pof_future_ohl_cond_50kv.Rd |only man/pof_future_ohl_fittings_50kv.Rd |only man/pof_future_pillar_04kv.Rd |only man/pof_future_poles.Rd |only man/pof_future_poles_ohl_support_50kv.Rd |only man/pof_future_relay.Rd |only man/pof_future_rtu.Rd |only man/pof_future_serviceline.Rd |only man/pof_future_submarine_cables_10kv_oil.Rd |only man/pof_future_submarine_cables_10kv_pex.Rd |only man/pof_future_submarine_cables_30_60kv_oil.Rd |only man/pof_future_submarine_cables_30_60kv_pex.Rd |only man/pof_future_switchgear_30_60kv.Rd |only man/pof_future_switchgear_primary_10kv.Rd |only man/pof_future_switchgear_secondary_10kv.Rd |only man/pof_future_transformer_04_10kv.Rd |only man/pof_future_transformer_11_20kv.Rd | 21 - man/pof_future_transformer_132kv.Rd | 22 - man/pof_future_transformer_30_60kv.Rd |only man/pof_future_transformer_33_66kv.Rd | 57 --- man/pof_meter.Rd |only man/pof_switchgear_primary_10kv.Rd |only man/pof_switchgear_secondary_10kV.Rd |only man/pof_tower_ohl_support_50kv.Rd |only man/pof_transformer_04_10kv.Rd |only man/pof_transformer_11_20kv.Rd | 18 man/pof_transformer_132kv.Rd | 22 - man/pof_transformer_30_60kv.Rd |only man/pof_transformer_33_66kv.Rd | 56 --- man/risk_calculation.Rd | 17 man/safety_cof_board_04kv.Rd |only man/safety_cof_cables_04_10kv.Rd |only man/safety_cof_ehv_cables.Rd | 6 man/safety_cof_ehv_fittings.Rd | 14 man/safety_cof_ehv_switchgear.Rd | 23 + man/safety_cof_hv_switchgear_distribution.Rd | 19 - man/safety_cof_hv_switchgear_primary.Rd | 14 man/safety_cof_lv_switchgear_and_other.Rd | 15 man/safety_cof_lv_ugb.Rd | 13 man/safety_cof_ohl_cond.Rd | 14 man/safety_cof_ohl_cond_50kv.Rd |only man/safety_cof_ohl_fittings_50kv.Rd |only man/safety_cof_pillar_04kv.Rd |only man/safety_cof_poles.Rd | 14 man/safety_cof_poles_ohl_support_50kv.Rd |only man/safety_cof_relay.Rd |only man/safety_cof_serviceline.Rd |only man/safety_cof_sub_cables.Rd | 4 man/safety_cof_submarine_cables_10kv.Rd |only man/safety_cof_submarine_cables_30_60kv.Rd |only man/safety_cof_switchgear_30_60kv.Rd |only man/safety_cof_switchgear_primary_10kv.Rd |only man/safety_cof_switchgear_secondary_10kv.Rd |only man/safety_cof_tower_ohl_support_50kv.Rd |only man/safety_cof_towers.Rd | 14 man/safety_cof_transformer_30_60kv.Rd |only man/safety_cof_transformers.Rd | 15 tests/testthat/test-matrix_functions.R | 8 tests/testthat/test-pof_future_cables_132kv.R | 3 tests/testthat/test-pof_future_cables_u66kv.R | 3 tests/testthat/test-pof_future_ohl_cond_132_66_33kv.R | 3 tests/testthat/test-pof_future_transformer_11_20kv.R | 3 tests/testthat/test-pof_future_transformer_33_66kv.R | 3 tests/testthat/test-risk_calculation.R | 4 237 files changed, 1200 insertions(+), 579 deletions(-)