Title: Implementation of BDAT Tree Taper Fortran Functions
Description: Implementing the BDAT tree taper Fortran routines, which were
developed for the German National Forest Inventory (NFI), to calculate
diameters, volume, assortments, double bark thickness and biomass for
different tree species based on tree characteristics and sorting information.
See Kublin (2003) <doi:10.1046/j.1439-0337.2003.00183.x> for details.
Author: Christian Vonderach [aut, cre],
Edgar Kublin [aut],
Bernhard Boesch [aut],
Gerald Kaendler [aut],
Dominik Cullmann [ctb]
Maintainer: Christian Vonderach <christian.vonderach@forst.bwl.de>
Diff between rBDAT versions 0.9.8 dated 2021-03-16 and 0.10.0 dated 2022-10-14
rBDAT-0.10.0/rBDAT/DESCRIPTION | 9 rBDAT-0.10.0/rBDAT/LICENSE | 4 rBDAT-0.10.0/rBDAT/MD5 | 78 - rBDAT-0.10.0/rBDAT/NEWS.md | 332 ++-- rBDAT-0.10.0/rBDAT/R/BDATBIOMASSE.R | 94 - rBDAT-0.10.0/rBDAT/R/BDATDMRHX.R | 94 - rBDAT-0.10.0/rBDAT/R/BDATDORHX.R | 94 - rBDAT-0.10.0/rBDAT/R/BDATRINDE2HX.R | 96 - rBDAT-0.10.0/rBDAT/R/BDATVOLABMR.R | 108 - rBDAT-0.10.0/rBDAT/R/BDATVOLABOR.R | 106 - rBDAT-0.10.0/rBDAT/R/BDATVOLDHMR.R | 120 - rBDAT-0.10.0/rBDAT/R/BDATVOLDHOR.R | 120 - rBDAT-0.10.0/rBDAT/R/buildTree.R | 1016 +++++++------- rBDAT-0.10.0/rBDAT/R/clearErrors.r |only rBDAT-0.10.0/rBDAT/R/errormessage.r |only rBDAT-0.10.0/rBDAT/R/getAssortment.R | 429 +++--- rBDAT-0.10.0/rBDAT/R/getBark.R | 184 +- rBDAT-0.10.0/rBDAT/R/getBiomass.R | 238 +-- rBDAT-0.10.0/rBDAT/R/getDiameter.R | 241 +-- rBDAT-0.10.0/rBDAT/R/getForm.R | 192 +- rBDAT-0.10.0/rBDAT/R/getHeight.R | 231 +-- rBDAT-0.10.0/rBDAT/R/getVolume.R | 563 ++++--- rBDAT-0.10.0/rBDAT/R/throw.R | 42 rBDAT-0.10.0/rBDAT/R/updateBdatNamespace.R | 162 +- rBDAT-0.10.0/rBDAT/build/vignette.rds |binary rBDAT-0.10.0/rBDAT/inst/NEWS.rd | 480 +++--- rBDAT-0.10.0/rBDAT/inst/doc/rbdat.R | 242 +-- rBDAT-0.10.0/rBDAT/inst/doc/rbdat.html | 1568 +++++++++++++--------- rBDAT-0.10.0/rBDAT/inst/doc/rbdat.rmd | 768 +++++----- rBDAT-0.10.0/rBDAT/inst/runit_tests/runit-throw.R | 6 rBDAT-0.10.0/rBDAT/man/clearError.Rd |only rBDAT-0.10.0/rBDAT/man/errormessage.Rd |only rBDAT-0.10.0/rBDAT/man/getBiomass.Rd | 5 rBDAT-0.10.0/rBDAT/man/getDiameter.Rd | 3 rBDAT-0.10.0/rBDAT/man/getForm.Rd | 7 rBDAT-0.10.0/rBDAT/man/getHeight.Rd | 3 rBDAT-0.10.0/rBDAT/man/getVolume.Rd | 3 rBDAT-0.10.0/rBDAT/tests/runit.R | 84 - rBDAT-0.10.0/rBDAT/tests/testthat.R | 8 rBDAT-0.10.0/rBDAT/tests/testthat/test-throw.R | 18 rBDAT-0.10.0/rBDAT/vignettes/rbdat.md |only rBDAT-0.10.0/rBDAT/vignettes/rbdat.rmd | 768 +++++----- rBDAT-0.9.8/rBDAT/README.md |only 43 files changed, 4519 insertions(+), 3997 deletions(-)
Title: Extract and Clean World Football (Soccer) Data
Description: Allow users to obtain clean and tidy
football (soccer) game, team and player data. Data is collected from a
number of popular sites, including 'FBref',
transfer and valuations data from
'Transfermarkt'<https://www.transfermarkt.com/> and shooting location
and other match stats data from 'Understat'<https://understat.com/>
and 'fotmob'<https://www.fotmob.com/>. It gives users the
ability to access data more efficiently, rather than having to export
data tables to files before being able to complete their analysis.
Author: Jason Zivkovic [aut, cre, cph],
Tony ElHabr [ctb],
Tan Ho [ctb],
Samuel H [ctb]
Maintainer: Jason Zivkovic <jaseziv83@gmail.com>
Diff between worldfootballR versions 0.6.0 dated 2022-08-24 and 0.6.1 dated 2022-10-14
DESCRIPTION | 16 - MD5 | 90 ++++----- NAMESPACE | 8 NEWS.md | 401 ++++++++---------------------------------- R/fb_big5_advanced_season.R | 40 ++-- R/fb_player_goal_logs.R |only R/fb_player_match_logs.R | 18 - R/fb_player_scouting.R | 6 R/fb_team_goal_logs.R |only R/fb_team_match_log_stats.R | 10 - R/fb_team_player_stats.R | 2 R/fbref_wages.R | 40 ++-- R/fotmob_helpers.R | 9 R/fotmob_leagues.R | 30 +-- R/fotmob_matches.R | 31 +-- R/fotmob_players.R | 19 - R/fotmob_stats.R | 36 +-- R/get_advanced_match_stats.R | 30 +-- R/get_match_lineups.R | 32 +-- R/get_match_report.R | 16 - R/get_match_results.R | 66 +++--- R/get_match_shooting.R | 28 +- R/get_match_summary.R | 90 ++++----- R/get_match_urls.R | 8 R/get_season_player_stats.R | 2 R/get_season_team_stats.R | 52 ++--- R/internals.R | 51 ++++- R/load_fb.R | 22 +- R/player_market_values.R | 48 ++--- R/team_match_results.R | 16 - R/tm_expiring_contracts.R | 26 +- R/tm_league_debutants.R | 36 +-- R/tm_league_injuries.R | 26 +- R/tm_matchday_table.R | 14 - R/tm_player_bio.R | 24 +- R/tm_player_injury_history.R | 32 +-- R/tm_squad_stats.R | 6 R/tm_staff_job_history.R | 8 R/tm_team_staff_history.R | 16 - R/tm_team_transfer_balances.R | 14 - R/tm_team_transfers.R | 14 - R/understat_match_results.R | 8 R/understat_shots.R | 6 R/worldfootballr_helpers.R | 16 - man/fb_player_goal_logs.Rd |only man/fb_team_goal_logs.Rd |only tests/testthat/test-fbref.R | 22 +- tests/testthat/test-fotmob.R | 11 - 48 files changed, 661 insertions(+), 835 deletions(-)
More information about worldfootballR at CRAN
Permanent link
Title: Stop Detection in Timestamped Trajectory Data using
Spatiotemporal Clustering
Description: Trajectory data formed by human or animal movement is often marked
by periods of movement interspersed with periods of standing still. It is
often of interest to researchers to separate geolocation trajectories of
latitude/longitude points by clustering consecutive locations to produce a
model of this behavior. This package implements the Stay Point detection
algorithm originally described in Ye (2009) <doi:10.1109/MDM.2009.11> that
uses time and distance thresholds to characterize spatial regions as
'stops'. This package also implements the concept of merging described in
Montoliu (2013) <doi:10.1007/s11042-011-0982-z> as stay point region
estimation, which allows for clustering of temporally adjacent stops for
which distance between the midpoints is less than the provided threshold.
GPS-like data from various sources can be used, but the temporal thresholds
must be considered with respect to the sampling interval, and the spatial
thresholds must be considered with respect [...truncated...]
Author: McCool Danielle [aut, cre]
Maintainer: McCool Danielle <d.m.mccool@uu.nl>
Diff between stopdetection versions 0.1.0 dated 2022-10-12 and 0.1.1 dated 2022-10-14
DESCRIPTION | 6 +++--- MD5 | 5 +++-- R/returnStateEvents.R | 3 +++ tests/testthat/test-returnStateEvents.R |only 4 files changed, 9 insertions(+), 5 deletions(-)
Title: Signal Processing Toolbox for Analyzing 'Electrophysiology' Data
Description: Implemented fast and memory-efficient 'Notch'-filter,
'Welch-periodogram', and discrete wavelet transform algorithm for hours of
high-resolution signals; providing fundamental toolbox
for 'iEEG' preprocess pipelines.
Documentation and examples about 'RAVE' project are provided at
<https://openwetware.org/wiki/RAVE>, and the paper by John F. Magnotti,
Zhengjia Wang, Michael S. Beauchamp (2020)
<doi:10.1016/j.neuroimage.2020.117341>; see 'citation("ravetools")' for
details.
Author: Zhengjia Wang [aut, cre, cph],
Beauchamp lab [cph],
Karim Rahim [cph] ,
Prerau Lab [cph] ,
RcppParallel Authors [cph] ,
Marcus Geelnard [cph]
Maintainer: Zhengjia Wang <dipterix.wang@gmail.com>
Diff between ravetools versions 0.0.7 dated 2022-09-19 and 0.0.8 dated 2022-10-14
DESCRIPTION | 8 - MD5 | 40 +++++---- NAMESPACE | 5 + NEWS.md | 9 ++ R/RcppExports.R | 16 +++ R/baseline.R | 16 +-- R/fast_quantile.R |only R/fir1.R | 14 +-- R/interpolate.R |only R/parse_svec.R |only R/plot-signals.R | 2 R/pwelch-diagnosis.R | 50 ++++++----- inst/include/ravetools_RcppExports.h | 84 +++++++++++++++++++ inst/include/tthread/tinythread.h | 25 ++++- man/baseline_array.Rd | 3 man/fast_quantile.Rd |only man/interpolate_stimulation.Rd |only src/RcppExports.cpp | 154 +++++++++++++++++++++++++++++++++++ src/baseline.cpp | 9 ++ src/columnQuantile.cpp |only src/common.h | 1 src/fastQuantile.cpp |only src/fastQuantile.h |only src/shiftarray.cpp | 2 tests/testthat/test-filter.R | 6 - 25 files changed, 377 insertions(+), 67 deletions(-)
Title: Excursion Sets and Contour Credibility Regions for Random Fields
Description: Functions that compute probabilistic excursion sets, contour credibility regions, contour avoiding regions, and simultaneous confidence bands for latent Gaussian random processes and fields. The package also contains functions that calculate these quantities for models estimated with the INLA package. The main references for excursions are Bolin and Lindgren (2015) <doi:10.1111/rssb.12055>, Bolin and Lindgren (2017) <doi:10.1080/10618600.2016.1228537>, and Bolin and Lindgren (2018) <doi:10.18637/jss.v086.i05>. These can be generated by the citation function in R.
Author: David Bolin [cre, aut],
Finn Lindgren [aut]
Maintainer: David Bolin <davidbolin@gmail.com>
Diff between excursions versions 2.5.3 dated 2022-08-25 and 2.5.4 dated 2022-10-14
excursions-2.5.3/excursions/inst/copying/GSL.txt |only excursions-2.5.3/excursions/src/Makevars |only excursions-2.5.3/excursions/src/gsl_fix.c |only excursions-2.5.3/excursions/tests/testthat/_snaps/test.contourmap.inla.md |only excursions-2.5.3/excursions/tests/testthat/test.continuous.R |only excursions-2.5.3/excursions/tests/testthat/test.contourmap.R |only excursions-2.5.3/excursions/tests/testthat/test.contourmap.inla.R |only excursions-2.5.3/excursions/tests/testthat/test.excursions.R |only excursions-2.5.3/excursions/tests/testthat/test.excursions.inla.R |only excursions-2.5.3/excursions/tests/testthat/test.integration.R |only excursions-2.5.3/excursions/tests/testthat/test.simconf.R |only excursions-2.5.3/excursions/tests/testthat/test.variances.R |only excursions-2.5.4/excursions/DESCRIPTION | 15 excursions-2.5.4/excursions/MD5 | 38 +- excursions-2.5.4/excursions/NEWS.md | 4 excursions-2.5.4/excursions/R/utils.R | 4 excursions-2.5.4/excursions/cleanup |only excursions-2.5.4/excursions/configure |only excursions-2.5.4/excursions/configure.ac |only excursions-2.5.4/excursions/inst/COPYRIGHTS | 9 excursions-2.5.4/excursions/src/Makevars.in |only excursions-2.5.4/excursions/src/Makevars.win |only excursions-2.5.4/excursions/src/gsl_fix.h | 183 ---------- excursions-2.5.4/excursions/tests/testthat/_snaps/contourmap_inla.md |only excursions-2.5.4/excursions/tests/testthat/helper-data.R | 20 - excursions-2.5.4/excursions/tests/testthat/test-continuous.R |only excursions-2.5.4/excursions/tests/testthat/test-contourmap.R |only excursions-2.5.4/excursions/tests/testthat/test-contourmap_inla.R |only excursions-2.5.4/excursions/tests/testthat/test-excursions.R |only excursions-2.5.4/excursions/tests/testthat/test-excursions_inla.R |only excursions-2.5.4/excursions/tests/testthat/test-integration.R |only excursions-2.5.4/excursions/tests/testthat/test-simconf.R |only excursions-2.5.4/excursions/tests/testthat/test-variances.R |only 33 files changed, 60 insertions(+), 213 deletions(-)
Title: High Performance CommonMark and Github Markdown Rendering in R
Description: The CommonMark specification defines a rationalized version of markdown
syntax. This package uses the 'cmark' reference implementation for converting
markdown text into various formats including html, latex and groff man. In
addition it exposes the markdown parse tree in xml format. Also includes opt-in
support for GFM extensions including tables, autolinks, and strikethrough text.
Author: Jeroen Ooms [aut, cre] ,
John MacFarlane [cph]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between commonmark versions 1.8.0 dated 2022-03-09 and 1.8.1 dated 2022-10-14
DESCRIPTION | 6 MD5 | 24 NEWS | 4 src/Makevars | 2 src/cmark/arena.c | 2 src/cmark/cmark-gfm.h | 4 src/cmark/cmark-gfm_version.h | 4 src/cmark/cmark.c | 6 src/cmark/inlines.c | 33 src/cmark/scanners.c | 4994 ++++++++++++++++++++---------------------- src/extensions.c | 2 src/extensions/autolink.c | 37 src/init.c | 2 13 files changed, 2584 insertions(+), 2536 deletions(-)
Title: ADaM in R Asset Library
Description: A toolbox for programming Clinical Data Interchange Standards Consortium
(CDISC) compliant Analysis Data Model (ADaM) datasets in R. ADaM datasets are a
mandatory part of any New Drug or Biologics License Application submitted to the
United States Food and Drug Administration (FDA). Analysis derivations are
implemented in accordance with the "Analysis Data Model Implementation Guide"
(CDISC Analysis Data Model Team, 2021, <https://www.cdisc.org/standards/foundational/adam/adamig-v1-3-release-package>).
Author: Thomas Neitmann [aut, cre],
Stefan Bundfuss [aut],
Ben Straub [aut],
Samia Kabi [aut],
Gordon Miller [aut],
Teckla Akinyi [aut],
Andrew Smith [aut],
Konstantina Koukourikou [aut],
Ross Farrugia [aut],
Eric Simms [aut],
Annie Yang [aut],
Robin Koeger [...truncated...]
Maintainer: Thomas Neitmann <thomas.neitmann@roche.com>
Diff between admiral versions 0.8.3 dated 2022-10-07 and 0.8.4 dated 2022-10-14
DESCRIPTION | 6 - MD5 | 8 +- NEWS.md | 4 + inst/doc/adsl.html | 4 - tests/testthat/test-deprecation.R | 123 ++++++++++++++++++-------------------- 5 files changed, 72 insertions(+), 73 deletions(-)
Title: Functions and Datasets for "Bayesian Methods: A Social and
Behavioral Sciences Approach"
Description: Functions and datasets for Jeff Gill: "Bayesian Methods: A Social and Behavioral Sciences Approach". First, Second, and Third Edition. Published by Chapman and Hall/CRC (2002, 2007, 2014) <doi:10.1201/b17888>.
Author: Jonathan Homola, Danielle Korman, Jacob Metz, Miguel Pereira, Mauricio Vela, and Jeff Gill <jgill5402@mac.com>
Maintainer: Jeff Gill <jgill5402@mac.com>
Diff between BaM versions 1.0.2 dated 2020-12-09 and 1.0.3 dated 2022-10-14
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ NAMESPACE | 1 - R/biv.norm.post.R | 25 ++++++++++++------------- man/africa.Rd | 2 +- man/asap.data.list.Rd | 2 +- man/baldus.Rd | 2 +- 7 files changed, 25 insertions(+), 27 deletions(-)
More information about FuzzyStatTraEOO at CRAN
Permanent link
Title: Approximate Summation of Series
Description: Application of theoretical results which ensure that the summation
of an infinite discrete series is within an arbitrary margin of error of its
true value. The C code under the hood is shared through header files to allow
users to sum their own low level functions as well. Based on the paper by
Braden (1992) <doi: 10.2307/2324995>.
Author: Guido A. Moreira [cre, aut] ,
Luiz Max Carvalho [ctb]
Maintainer: Guido A. Moreira <guidoalber@gmail.com>
Diff between sumR versions 0.4.8 dated 2022-09-29 and 0.4.10 dated 2022-10-14
DESCRIPTION | 10 +++++----- MD5 | 4 ++-- src/r_wrappers.h | 2 +- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: File-System Toolbox for RAVE Project
Description: Includes multiple cross-platform read/write interfaces for
'RAVE' project. 'RAVE' stands for "R analysis and visualization of human
intracranial electroencephalography data". The whole project aims at
providing powerful free-source package that analyze brain recordings from
patients with electrodes placed on the cortical surface or inserted into
the brain. 'raveio' as part of this project provides tools to read/write
neurophysiology data from/to 'RAVE' file structure, as well as several
popular formats including 'EDF(+)', 'Matlab', 'BIDS-iEEG', and 'HDF5',
etc. Documentation and examples about 'RAVE' project are provided at
<https://openwetware.org/wiki/RAVE>, and the paper by John F. Magnotti,
Zhengjia Wang, Michael S. Beauchamp (2020)
<doi:10.1016/j.neuroimage.2020.117341>; see 'citation("raveio")' for
details.
Author: Zhengjia Wang [aut, cre, cph],
Beauchamp lab [cph, fnd]
Maintainer: Zhengjia Wang <dipterix.wang@gmail.com>
Diff between raveio versions 0.0.8 dated 2022-08-25 and 0.0.9 dated 2022-10-14
DESCRIPTION | 10 MD5 | 89 +-- NAMESPACE | 15 NEWS.md | 34 + R/aaa.R | 47 + R/blackrock-parser.R | 164 +++--- R/class-BlackrockFile.R | 116 ++++ R/class-LFP_electrode.R | 185 +++++-- R/class-LFP_reference.R | 87 ++- R/class-electrode-abstract.R | 9 R/class-pipeline_tools.R | 46 + R/class-preprocess.R | 1 R/class-watch-dog.R | 33 + R/collapse-power.R | 32 - R/pipeline-docs.R | 7 R/pipeline-run.R | 13 R/pipeline-tools.R | 87 +++ R/rave-import.R | 24 R/rave-prepare-subjectbare.R | 135 +++++ R/rave-prepare-voltage-with-epoch.R |only R/rave-prepare.R | 1 R/rave-raw.R | 16 R/rave-wavelet.R |only R/rave2-experimental.R | 584 ----------------------- R/tensor-baseline-power.R |only R/tensor-baseline-voltage.R |only R/units.R | 34 - R/url.R |only R/validate.R | 26 - R/zzz.R | 21 inst/WORDLIST | 4 inst/shell-templates/fsl-flirt-coregistration.sh | 2 man/BlackrockFile.Rd | 8 man/LFP_electrode.Rd | 54 +- man/LFP_reference.Rd | 9 man/PipelineTools.Rd | 96 +++ man/RAVEAbstarctElectrode.Rd | 4 man/RAVEPreprocessSettings.Rd | 1 man/auto_process_blackrock.Rd | 6 man/collapse2.Rd | 2 man/convert_blackrock.Rd |only man/power_baseline.Rd | 32 - man/rave-pipeline.Rd | 43 + man/rave-prepare.Rd | 40 + man/raveio-constants.Rd | 13 man/read_nsx_nev.Rd | 3 man/url_neurosynth.Rd |only man/voltage_baseline.Rd |only man/with_future_parallel.Rd | 11 tests/testthat/test-rave_data_types.R |only 50 files changed, 1270 insertions(+), 874 deletions(-)
Title: A Compression Format Optimized for the Web
Description: A lossless compressed data format that uses a combination of the
LZ77 algorithm and Huffman coding. Brotli is similar in speed to deflate (gzip)
but offers more dense compression.
Author: Jeroen Ooms [aut, cre] ,
Google, Inc [aut, cph]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between brotli versions 1.2 dated 2018-05-13 and 1.3.0 dated 2022-10-14
brotli-1.2/brotli/src/common/dictionary.bin |only brotli-1.2/brotli/src/dec/context.h |only brotli-1.2/brotli/src/dec/transform.h |only brotli-1.2/brotli/src/enc/context.h |only brotli-1.3.0/brotli/DESCRIPTION | 12 brotli-1.3.0/brotli/MD5 | 138 brotli-1.3.0/brotli/NEWS | 6 brotli-1.3.0/brotli/build/vignette.rds |binary brotli-1.3.0/brotli/inst/doc/benchmarks.R | 12 brotli-1.3.0/brotli/inst/doc/benchmarks.html | 237 brotli-1.3.0/brotli/man/brotli.Rd | 2 brotli-1.3.0/brotli/src/Makevars | 17 brotli-1.3.0/brotli/src/common/constants.c |only brotli-1.3.0/brotli/src/common/constants.h | 136 brotli-1.3.0/brotli/src/common/context.c |only brotli-1.3.0/brotli/src/common/context.h | 156 brotli-1.3.0/brotli/src/common/dictionary.c | 15 brotli-1.3.0/brotli/src/common/platform.c |only brotli-1.3.0/brotli/src/common/platform.h | 403 + brotli-1.3.0/brotli/src/common/transform.c | 71 brotli-1.3.0/brotli/src/common/transform.h | 5 brotli-1.3.0/brotli/src/common/version.h | 4 brotli-1.3.0/brotli/src/dec/bit_reader.c | 28 brotli-1.3.0/brotli/src/dec/bit_reader.h | 76 brotli-1.3.0/brotli/src/dec/decode.c | 704 +- brotli-1.3.0/brotli/src/dec/huffman.c | 81 brotli-1.3.0/brotli/src/dec/huffman.h | 71 brotli-1.3.0/brotli/src/dec/prefix.h | 18 brotli-1.3.0/brotli/src/dec/state.c | 23 brotli-1.3.0/brotli/src/dec/state.h | 181 brotli-1.3.0/brotli/src/enc/backward_references.c | 30 brotli-1.3.0/brotli/src/enc/backward_references.h | 9 brotli-1.3.0/brotli/src/enc/backward_references_hq.c | 169 brotli-1.3.0/brotli/src/enc/backward_references_hq.h | 28 brotli-1.3.0/brotli/src/enc/backward_references_inc.h | 46 brotli-1.3.0/brotli/src/enc/block_splitter.c | 6 brotli-1.3.0/brotli/src/enc/block_splitter_inc.h | 21 brotli-1.3.0/brotli/src/enc/brotli_bit_stream.c | 43 brotli-1.3.0/brotli/src/enc/brotli_bit_stream.h | 5 brotli-1.3.0/brotli/src/enc/cluster_inc.h | 9 brotli-1.3.0/brotli/src/enc/command.c |only brotli-1.3.0/brotli/src/enc/command.h | 36 brotli-1.3.0/brotli/src/enc/compress_fragment.c | 10 brotli-1.3.0/brotli/src/enc/compress_fragment_two_pass.c | 148 brotli-1.3.0/brotli/src/enc/dictionary_hash.c | 2926 ++++++----- brotli-1.3.0/brotli/src/enc/dictionary_hash.h | 3 brotli-1.3.0/brotli/src/enc/encode.c | 179 brotli-1.3.0/brotli/src/enc/encoder_dict.c | 5 brotli-1.3.0/brotli/src/enc/encoder_dict.h | 5 brotli-1.3.0/brotli/src/enc/entropy_encode.c | 2 brotli-1.3.0/brotli/src/enc/entropy_encode.h | 4 brotli-1.3.0/brotli/src/enc/fast_log.c |only brotli-1.3.0/brotli/src/enc/fast_log.h | 117 brotli-1.3.0/brotli/src/enc/find_match_length.h | 5 brotli-1.3.0/brotli/src/enc/hash.h | 221 brotli-1.3.0/brotli/src/enc/hash_composite_inc.h |only brotli-1.3.0/brotli/src/enc/hash_forgetful_chain_inc.h | 137 brotli-1.3.0/brotli/src/enc/hash_longest_match64_inc.h | 103 brotli-1.3.0/brotli/src/enc/hash_longest_match_inc.h | 106 brotli-1.3.0/brotli/src/enc/hash_longest_match_quickly_inc.h | 151 brotli-1.3.0/brotli/src/enc/hash_rolling_inc.h |only brotli-1.3.0/brotli/src/enc/hash_to_binary_tree_inc.h | 80 brotli-1.3.0/brotli/src/enc/memory.h | 36 brotli-1.3.0/brotli/src/enc/metablock.c | 53 brotli-1.3.0/brotli/src/enc/metablock_inc.h | 2 brotli-1.3.0/brotli/src/enc/params.h | 4 brotli-1.3.0/brotli/src/enc/quality.h | 18 brotli-1.3.0/brotli/src/enc/ringbuffer.h | 5 brotli-1.3.0/brotli/src/enc/static_dict.c | 10 brotli-1.3.0/brotli/src/enc/utf8_util.c | 2 brotli-1.3.0/brotli/src/enc/write_bits.h | 54 brotli-1.3.0/brotli/src/include/brotli/encode.h | 23 brotli-1.3.0/brotli/src/include/brotli/port.h | 274 - brotli-1.3.0/brotli/src/include/brotli/types.h | 7 brotli-1.3.0/brotli/src/tools/brotli.c | 90 brotli-1.3.0/brotli/src/tools/brotli.md |only 76 files changed, 4696 insertions(+), 2882 deletions(-)
Title: Structurally Guided Sampling
Description: Structurally guided sampling (SGS) approaches for airborne laser scanning (ALS; LIDAR). Primary functions provide means
to generate data-driven stratifications & methods for allocating samples. Intermediate functions for calculating and extracting important information
about input covariates and samples are also included. Processing outcomes are intended to help forest and environmental management
practitioners better optimize field sample placement as well as assess and augment existing sample networks in the context of data
distributions and conditions. ALS data is the primary intended use case, however any rasterized remote sensing data can be used,
enabling data-driven stratifications and sampling approaches.
Author: Tristan RH Goodbody [aut, cre, cph]
,
Nicholas C Coops [aut] ,
Martin Queinnec [aut]
Maintainer: Tristan RH Goodbody <goodbody.t@gmail.com>
Diff between sgsR versions 1.2.0 dated 2022-08-07 and 1.3.1 dated 2022-10-14
sgsR-1.2.0/sgsR/tests/testthat/test-mask_access.R |only sgsR-1.3.1/sgsR/DESCRIPTION | 6 sgsR-1.3.1/sgsR/MD5 | 76 - sgsR-1.3.1/sgsR/NAMESPACE | 2 sgsR-1.3.1/sgsR/NEWS.md | 16 sgsR-1.3.1/sgsR/R/extract_metrics.R | 9 sgsR-1.3.1/sgsR/R/extract_strata.R | 11 sgsR-1.3.1/sgsR/R/sample_clhs.R | 4 sgsR-1.3.1/sgsR/R/sample_existing.R |only sgsR-1.3.1/sgsR/R/sample_nc.R | 1 sgsR-1.3.1/sgsR/R/sample_systematic.R | 137 ++- sgsR-1.3.1/sgsR/R/utils-mask.R | 108 ++ sgsR-1.3.1/sgsR/README.md | 18 sgsR-1.3.1/sgsR/build/vignette.rds |binary sgsR-1.3.1/sgsR/inst/doc/calculating.html | 125 +-- sgsR-1.3.1/sgsR/inst/doc/sampling.R | 52 + sgsR-1.3.1/sgsR/inst/doc/sampling.Rmd | 94 ++ sgsR-1.3.1/sgsR/inst/doc/sampling.html | 636 ++++++++++------ sgsR-1.3.1/sgsR/inst/doc/sgsR.html | 115 +- sgsR-1.3.1/sgsR/inst/doc/stratification.html | 115 +- sgsR-1.3.1/sgsR/man/allocating.Rd | 90 +- sgsR-1.3.1/sgsR/man/extract_metrics.Rd | 4 sgsR-1.3.1/sgsR/man/extract_strata.Rd | 4 sgsR-1.3.1/sgsR/man/masking.Rd | 9 sgsR-1.3.1/sgsR/man/sample_ahels.Rd | 1 sgsR-1.3.1/sgsR/man/sample_balanced.Rd | 1 sgsR-1.3.1/sgsR/man/sample_clhs.Rd | 1 sgsR-1.3.1/sgsR/man/sample_existing.Rd |only sgsR-1.3.1/sgsR/man/sample_nc.Rd | 4 sgsR-1.3.1/sgsR/man/sample_srs.Rd | 1 sgsR-1.3.1/sgsR/man/sample_strat.Rd | 1 sgsR-1.3.1/sgsR/man/sample_systematic.Rd | 5 sgsR-1.3.1/sgsR/tests/testthat.R | 24 sgsR-1.3.1/sgsR/tests/testthat/setup-testthat.R | 9 sgsR-1.3.1/sgsR/tests/testthat/test-extract_metrics.R | 2 sgsR-1.3.1/sgsR/tests/testthat/test-extract_strata.R | 1 sgsR-1.3.1/sgsR/tests/testthat/test-sample_clhs.R | 1 sgsR-1.3.1/sgsR/tests/testthat/test-sample_existing.R |only sgsR-1.3.1/sgsR/tests/testthat/test-sample_systematic.R | 13 sgsR-1.3.1/sgsR/tests/testthat/test-utils-mask.R | 58 + sgsR-1.3.1/sgsR/vignettes/sampling.Rmd | 94 ++ 41 files changed, 1272 insertions(+), 576 deletions(-)
Title: Filtering and Assessing the Sample Size of Tracking Data
Description: Functions to filter GPS/Argos locations, as well as assessing the sample size for the analysis of animal distributions. The filters remove temporal and spatial duplicates, fixes located at a given height from estimated high tide line, and locations with high error as described in Shimada et al. (2012) <doi:10.3354/meps09747> and Shimada et al. (2016) <doi:10.1007/s00227-015-2771-0>. Sample size for the analysis of animal distributions can be assessed by the conventional area-based approach or the alternative probability-based approach as described in Shimada et al. (2021) <doi:10.1111/2041-210X.13506>.
Author: Takahiro Shimada
Maintainer: Takahiro Shimada <taka.shimada@gmail.com>
Diff between SDLfilter versions 2.2.1 dated 2022-05-24 and 2.3.0 dated 2022-10-14
DESCRIPTION | 12 MD5 | 58 +-- NAMESPACE | 16 NEWS | 168 +++++---- NEWS.md | 192 +++++------ R/asymptote.R | 4 R/boot_area.R | 346 ++++++++++---------- R/boot_overlap.R | 424 ++++++++++++------------ R/combn_overlap.R | 428 ++++++++++++------------- R/ddfilter_loop.R | 83 ++-- R/ddfilter_speed.R | 85 ++-- R/dupfilter_exact.R | 2 R/dupfilter_qi.R | 158 --------- R/dupfilter_space.R | 633 ++++++++++++++++++------------------- R/dupfilter_time.R | 522 +++++++++++++++--------------- R/kml_track.R |only R/to_kmz.R |only R/to_map.R | 437 ++++++++++++------------- R/track_param.R | 198 +++++------ R/vmax.R | 207 +++++++----- R/vmaxlp.R | 106 ++++-- README.md | 502 ++++++++++++++--------------- build/partial.rdb |binary man/asymptote.Rd | 4 man/boot_area.Rd | 2 man/dupfilter_exact.Rd | 2 man/figures/unnamed-chunk-13-1.png |binary man/figures/unnamed-chunk-7-1.png |binary man/kml_track.Rd |only man/to_kmz.Rd |only man/vmax.Rd | 19 - man/vmaxlp.Rd | 21 - 32 files changed, 2352 insertions(+), 2277 deletions(-)
Title: Simplify 'ggplot2' Visualisation
Description: Simplify 'ggplot2' visualisation with 'ggblanket' wrapper functions.
Author: David Hodge [aut, cre]
Maintainer: David Hodge <davidhodge931@gmail.com>
Diff between ggblanket versions 1.4.0 dated 2022-09-02 and 1.5.0 dated 2022-10-14
DESCRIPTION | 10 MD5 | 146 +++--- NAMESPACE | 2 NEWS.md | 13 R/add_tooltip_text.R | 5 R/gg_area.R | 1080 ++++++++++++++++++++++++---------------------- R/gg_bar.R | 1080 ++++++++++++++++++++++++---------------------- R/gg_bin2d.R |only R/gg_blank.R | 1111 ++++++++++++++++++++++++++--------------------- R/gg_boxplot.R | 1081 ++++++++++++++++++++++++---------------------- R/gg_col.R | 1081 ++++++++++++++++++++++++---------------------- R/gg_crossbar.R | 1119 ++++++++++++++++++++++++++---------------------- R/gg_density.R | 1081 ++++++++++++++++++++++++---------------------- R/gg_errorbar.R | 1116 ++++++++++++++++++++++++++--------------------- R/gg_freqpoly.R | 1080 ++++++++++++++++++++++++---------------------- R/gg_function.R | 1080 ++++++++++++++++++++++++---------------------- R/gg_hex.R |only R/gg_histogram.R | 1087 ++++++++++++++++++++++++---------------------- R/gg_jitter.R | 1081 ++++++++++++++++++++++++---------------------- R/gg_label.R | 1081 ++++++++++++++++++++++++---------------------- R/gg_line.R | 1093 +++++++++++++++++++++++++--------------------- R/gg_linerange.R | 1117 ++++++++++++++++++++++++++--------------------- R/gg_path.R | 1080 ++++++++++++++++++++++++---------------------- R/gg_point.R | 1080 ++++++++++++++++++++++++---------------------- R/gg_pointrange.R | 1117 ++++++++++++++++++++++++++--------------------- R/gg_polygon.R | 1081 ++++++++++++++++++++++++---------------------- R/gg_qq.R | 1080 ++++++++++++++++++++++++---------------------- R/gg_raster.R | 1081 ++++++++++++++++++++++++---------------------- R/gg_rect.R | 1117 ++++++++++++++++++++++++++--------------------- R/gg_ribbon.R | 1118 ++++++++++++++++++++++++++--------------------- R/gg_segment.R | 1117 ++++++++++++++++++++++++++--------------------- R/gg_sf.R | 543 ++++++++++++----------- R/gg_smooth.R | 1098 +++++++++++++++++++++++++---------------------- R/gg_step.R | 1093 +++++++++++++++++++++++++--------------------- R/gg_text.R | 1093 +++++++++++++++++++++++++--------------------- R/gg_theme.R | 319 +++---------- R/gg_tile.R | 1093 +++++++++++++++++++++++++--------------------- R/gg_violin.R | 1096 +++++++++++++++++++++++++---------------------- inst/doc/ggblanket.R | 171 ++++--- inst/doc/ggblanket.Rmd | 341 ++++++++------ inst/doc/ggblanket.html | 759 +++++++++++++++++--------------- man/add_tooltip_text.Rd | 4 man/gg_area.Rd | 28 - man/gg_bar.Rd | 28 - man/gg_bin2d.Rd |only man/gg_blank.Rd | 28 - man/gg_boxplot.Rd | 28 - man/gg_col.Rd | 28 - man/gg_crossbar.Rd | 32 - man/gg_density.Rd | 28 - man/gg_errorbar.Rd | 28 - man/gg_freqpoly.Rd | 28 - man/gg_function.Rd | 28 - man/gg_hex.Rd |only man/gg_histogram.Rd | 34 - man/gg_jitter.Rd | 28 - man/gg_label.Rd | 28 - man/gg_line.Rd | 41 + man/gg_linerange.Rd | 28 - man/gg_path.Rd | 28 - man/gg_point.Rd | 28 - man/gg_pointrange.Rd | 28 - man/gg_polygon.Rd | 454 +++++++++---------- man/gg_qq.Rd | 28 - man/gg_raster.Rd | 28 - man/gg_rect.Rd | 28 - man/gg_ribbon.Rd | 28 - man/gg_segment.Rd | 36 + man/gg_sf.Rd | 31 - man/gg_smooth.Rd | 36 + man/gg_step.Rd | 40 + man/gg_text.Rd | 40 + man/gg_theme.Rd | 101 ++-- man/gg_tile.Rd | 40 + man/gg_violin.Rd | 42 + vignettes/ggblanket.Rmd | 341 ++++++++------ 76 files changed, 19462 insertions(+), 16363 deletions(-)
Title: Statistical Tools for Filebacked Big Matrices
Description: Easy-to-use, efficient, flexible and scalable statistical tools.
Package bigstatsr provides and uses Filebacked Big Matrices via memory-mapping.
It provides for instance matrix operations, Principal Component Analysis,
sparse linear supervised models, utility functions and more
<doi:10.1093/bioinformatics/bty185>.
Author: Florian Prive [aut, cre],
Michael Blum [ths],
Hugues Aschard [ths]
Maintainer: Florian Prive <florian.prive.21@gmail.com>
Diff between bigstatsr versions 1.5.6 dated 2022-02-03 and 1.5.12 dated 2022-10-14
bigstatsr-1.5.12/bigstatsr/DESCRIPTION | 27 bigstatsr-1.5.12/bigstatsr/MD5 | 153 +-- bigstatsr-1.5.12/bigstatsr/NAMESPACE | 208 ++--- bigstatsr-1.5.12/bigstatsr/NEWS.md | 20 bigstatsr-1.5.12/bigstatsr/R/FBM-attach.R | 6 bigstatsr-1.5.12/bigstatsr/R/FBM-code256.R | 2 bigstatsr-1.5.12/bigstatsr/R/FBM-copy.R | 2 bigstatsr-1.5.12/bigstatsr/R/FBM.R | 27 bigstatsr-1.5.12/bigstatsr/R/RcppExports.R | 8 bigstatsr-1.5.12/bigstatsr/R/biglasso.R | 2 bigstatsr-1.5.12/bigstatsr/R/bigstatsr-package.R | 2 bigstatsr-1.5.12/bigstatsr/R/crochet.R | 6 bigstatsr-1.5.12/bigstatsr/R/mult-mat.R | 1 bigstatsr-1.5.12/bigstatsr/R/transpose.R | 2 bigstatsr-1.5.12/bigstatsr/R/zzz.R | 3 bigstatsr-1.5.12/bigstatsr/README.md | 7 bigstatsr-1.5.12/bigstatsr/build/partial.rdb |binary bigstatsr-1.5.12/bigstatsr/inst/WORDLIST | 2 bigstatsr-1.5.12/bigstatsr/inst/include/bigstatsr/univLogReg.hpp | 9 bigstatsr-1.5.12/bigstatsr/man/AUC.Rd | 130 +-- bigstatsr-1.5.12/bigstatsr/man/COPY_biglasso_main.Rd | 242 ++--- bigstatsr-1.5.12/bigstatsr/man/COPY_biglasso_part.Rd | 112 +- bigstatsr-1.5.12/bigstatsr/man/Extract.Rd | 64 - bigstatsr-1.5.12/bigstatsr/man/FBM-class.Rd | 276 +++--- bigstatsr-1.5.12/bigstatsr/man/FBM-methods.Rd | 102 +- bigstatsr-1.5.12/bigstatsr/man/FBM.code256-class.Rd | 152 +-- bigstatsr-1.5.12/bigstatsr/man/Replace.Rd | 68 - bigstatsr-1.5.12/bigstatsr/man/asPlotlyText.Rd | 62 - bigstatsr-1.5.12/bigstatsr/man/big_SVD.Rd | 244 ++--- bigstatsr-1.5.12/bigstatsr/man/big_apply.Rd | 158 +-- bigstatsr-1.5.12/bigstatsr/man/big_attach.Rd | 60 - bigstatsr-1.5.12/bigstatsr/man/big_colstats.Rd | 116 +- bigstatsr-1.5.12/bigstatsr/man/big_copy.Rd | 142 +-- bigstatsr-1.5.12/bigstatsr/man/big_cor.Rd | 136 +-- bigstatsr-1.5.12/bigstatsr/man/big_counts.Rd | 104 +- bigstatsr-1.5.12/bigstatsr/man/big_cprodMat.Rd | 190 ++-- bigstatsr-1.5.12/bigstatsr/man/big_cprodVec.Rd | 124 +-- bigstatsr-1.5.12/bigstatsr/man/big_crossprodSelf.Rd | 170 ++-- bigstatsr-1.5.12/bigstatsr/man/big_increment.Rd | 66 - bigstatsr-1.5.12/bigstatsr/man/big_parallelize.Rd | 196 ++-- bigstatsr-1.5.12/bigstatsr/man/big_prodMat.Rd | 178 ++-- bigstatsr-1.5.12/bigstatsr/man/big_prodVec.Rd | 124 +-- bigstatsr-1.5.12/bigstatsr/man/big_randomSVD.Rd | 254 +++--- bigstatsr-1.5.12/bigstatsr/man/big_read.Rd | 118 +- bigstatsr-1.5.12/bigstatsr/man/big_scale.Rd | 96 +- bigstatsr-1.5.12/bigstatsr/man/big_spLinReg.Rd | 398 ++++----- bigstatsr-1.5.12/bigstatsr/man/big_spLogReg.Rd | 412 +++++----- bigstatsr-1.5.12/bigstatsr/man/big_tcrossprodSelf.Rd | 170 ++-- bigstatsr-1.5.12/bigstatsr/man/big_transpose.Rd | 60 - bigstatsr-1.5.12/bigstatsr/man/big_univLinReg.Rd | 182 ++-- bigstatsr-1.5.12/bigstatsr/man/big_univLogReg.Rd | 214 ++--- bigstatsr-1.5.12/bigstatsr/man/big_write.Rd | 90 +- bigstatsr-1.5.12/bigstatsr/man/bigstatsr-package.Rd | 173 ++-- bigstatsr-1.5.12/bigstatsr/man/block_size.Rd | 52 - bigstatsr-1.5.12/bigstatsr/man/covar_from_df.Rd | 46 - bigstatsr-1.5.12/bigstatsr/man/get_beta.Rd | 40 bigstatsr-1.5.12/bigstatsr/man/pasteLoc.Rd | 62 - bigstatsr-1.5.12/bigstatsr/man/pcor.Rd | 56 - bigstatsr-1.5.12/bigstatsr/man/plot.big_SVD.Rd | 190 ++-- bigstatsr-1.5.12/bigstatsr/man/plot.big_sp_list.Rd | 48 - bigstatsr-1.5.12/bigstatsr/man/plot.mhtest.Rd | 102 +- bigstatsr-1.5.12/bigstatsr/man/predict.big_SVD.Rd | 168 ++-- bigstatsr-1.5.12/bigstatsr/man/predict.big_sp.Rd | 76 - bigstatsr-1.5.12/bigstatsr/man/predict.big_sp_list.Rd | 104 +- bigstatsr-1.5.12/bigstatsr/man/predict.mhtest.Rd | 56 - bigstatsr-1.5.12/bigstatsr/man/reexports.Rd | 44 - bigstatsr-1.5.12/bigstatsr/man/sub_bk.Rd | 54 - bigstatsr-1.5.12/bigstatsr/man/summary.big_sp_list.Rd | 52 - bigstatsr-1.5.12/bigstatsr/man/theme_bigstatsr.Rd | 40 bigstatsr-1.5.12/bigstatsr/man/without_downcast_warning.Rd | 40 bigstatsr-1.5.12/bigstatsr/src/Makevars | 2 bigstatsr-1.5.12/bigstatsr/src/RcppExports.cpp | 28 bigstatsr-1.5.12/bigstatsr/tests/testthat/test-AUC.R | 10 bigstatsr-1.5.12/bigstatsr/tests/testthat/test-FBM-file.R | 54 + bigstatsr-1.5.12/bigstatsr/tests/testthat/test-copy.R | 15 bigstatsr-1.5.12/bigstatsr/tests/testthat/test-prodMat.R | 14 bigstatsr-1.5.12/bigstatsr/tests/testthat/test-transpose.R | 15 bigstatsr-1.5.6/bigstatsr/src/FBM-file.cpp |only 78 files changed, 3658 insertions(+), 3580 deletions(-)
Title: Climatic Indices for Agriculture
Description: Collection of functions to compute agroclimatic indices useful
to zoning areas based on climatic variables and to evaluate the importance
of temperature and precipitation for individual crops, or in general for
agricultural lands.
Author: Roberto Serrano-Notivoli [aut, cre]
Maintainer: Roberto Serrano-Notivoli <roberto.serrano@uam.es>
Diff between agroclim versions 0.2.0 dated 2022-04-08 and 0.3.0 dated 2022-10-14
DESCRIPTION | 13 ++++++------- MD5 | 18 +++++++++--------- R/ehe.R | 6 +++--- R/firstFrost.R | 4 ++-- R/firstTemp.R | 4 ++-- R/frostDays.R | 4 ++-- R/frostFreqs.R | 2 +- R/lastFrost.R | 4 ++-- R/tempProb.R | 2 +- data/data_clim.RData |binary 10 files changed, 28 insertions(+), 29 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-06-12 1.0.2
2020-05-05 1.0.1
2019-01-08 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-02-26 0.1.4
2020-08-06 0.1.3
2020-07-27 0.1.2
2020-07-21 0.1.1
2020-06-04 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-09-22 0.1.0