Title: Penalised Maximum Likelihood for Survival Analysis Models
Description: Estimate the regression coefficients and the baseline hazard
of proportional hazard Cox models with left, right or interval censored survival data
using maximum penalised likelihood. A 'non-parametric' smooth estimate of the baseline hazard
function is provided.
Author: Dominique-Laurent Couturier, Jun Ma, Stephane Heritier, Maurizio Manuguerra.
Maintainer: Dominique-Laurent Couturier <dominique-laurent.couturier@cruk.cam.ac.uk>
Diff between survivalMPL versions 0.2-1 dated 2021-11-15 and 0.2-2 dated 2022-11-20
DESCRIPTION | 11 ++++++----- MD5 | 12 +++++++----- NEWS | 12 ++++++++++++ R/coxph.r | 6 +++++- data |only man/bcos2.Rd |only man/coxph_mpl.Rd | 20 ++++++++++++++++++-- man/coxph_mpl.object.Rd | 3 --- 8 files changed, 48 insertions(+), 16 deletions(-)
Title: Create Flexible Forest Plot
Description: Create forest plot based on the layout of the data. Confidence interval in multiple columns by groups can be done easily. Editing plot, inserting/adding text, applying theme to the plot and much more.
Author: Alimu Dayimu [aut, cre]
Maintainer: Alimu Dayimu <ad938@cam.ac.uk>
Diff between forestploter versions 0.2.2 dated 2022-10-19 and 0.2.3 dated 2022-11-20
forestploter-0.2.2/forestploter/R/add_underline.R |only forestploter-0.2.2/forestploter/man/add_underline.Rd |only forestploter-0.2.3/forestploter/DESCRIPTION | 8 - forestploter-0.2.3/forestploter/MD5 | 62 ++++----- forestploter-0.2.3/forestploter/NAMESPACE | 2 forestploter-0.2.3/forestploter/NEWS.md | 6 forestploter-0.2.3/forestploter/R/add_border.R |only forestploter-0.2.3/forestploter/R/check_errors.r | 5 forestploter-0.2.3/forestploter/R/edit_plot.R | 3 forestploter-0.2.3/forestploter/R/forest.R | 27 +--- forestploter-0.2.3/forestploter/R/helper.R | 6 forestploter-0.2.3/forestploter/R/legend_grob.R | 21 +++ forestploter-0.2.3/forestploter/R/theme.R | 21 ++- forestploter-0.2.3/forestploter/README.md | 11 + forestploter-0.2.3/forestploter/inst/doc/forestploter-intro.R | 9 - forestploter-0.2.3/forestploter/inst/doc/forestploter-intro.Rmd | 13 +- forestploter-0.2.3/forestploter/inst/doc/forestploter-intro.html | 65 +++++----- forestploter-0.2.3/forestploter/man/add_border.Rd |only forestploter-0.2.3/forestploter/man/check_errors.Rd | 7 - forestploter-0.2.3/forestploter/man/edit_plot.Rd | 3 forestploter-0.2.3/forestploter/man/figures/README-edit-1.png |binary forestploter-0.2.3/forestploter/man/figures/README-example-1.png |binary forestploter-0.2.3/forestploter/man/forest.Rd | 7 - forestploter-0.2.3/forestploter/tests/testthat/Rplots.pdf |binary forestploter-0.2.3/forestploter/tests/testthat/_snaps/forest/edit-plot-with-theme.svg | 31 ++-- forestploter-0.2.3/forestploter/tests/testthat/_snaps/forest/insert-text-vector.svg | 6 forestploter-0.2.3/forestploter/tests/testthat/_snaps/forest/multiple-columns-and-multi-parameters.svg | 8 - forestploter-0.2.3/forestploter/tests/testthat/_snaps/forest/simple-forest-plot-with-theme.svg | 6 forestploter-0.2.3/forestploter/tests/testthat/_snaps/forest/summary-ci.svg | 6 forestploter-0.2.3/forestploter/tests/testthat/_snaps/forest/x-scale-log2.svg | 2 forestploter-0.2.3/forestploter/tests/testthat/test-check_errors.r | 8 - forestploter-0.2.3/forestploter/tests/testthat/test-forest.R | 17 +- forestploter-0.2.3/forestploter/tests/testthat/test-theme.R | 7 + forestploter-0.2.3/forestploter/vignettes/forestploter-intro.Rmd | 13 +- 34 files changed, 213 insertions(+), 167 deletions(-)
Title: Forecasting Functions for Time Series and Linear Models
Description: Methods and tools for displaying and analysing
univariate time series forecasts including exponential smoothing
via state space models and automatic ARIMA modelling.
Author: Rob Hyndman [aut, cre, cph] ,
George Athanasopoulos [aut] ,
Christoph Bergmeir [aut] ,
Gabriel Caceres [aut] ,
Leanne Chhay [aut],
Kirill Kuroptev [aut],
Mitchell O'Hara-Wild [aut] ,
Fotios Petropoulos [aut] ,
Slava Razbash [aut],
Earo Wang [aut] ,
F [...truncated...]
Maintainer: Rob Hyndman <Rob.Hyndman@monash.edu>
Diff between forecast versions 8.18 dated 2022-10-01 and 8.19 dated 2022-11-20
DESCRIPTION | 54 +++++++++-------- MD5 | 120 +++++++++++++++++++-------------------- NEWS.md | 3 R/DM2.R | 2 R/acf.R | 11 +-- R/adjustSeasonalSeeds.R | 1 R/arfima.R | 1 R/arima.R | 4 - R/armaroots.R | 1 R/baggedModel.R | 4 - R/bats.R | 6 - R/bootstrap.R | 2 R/calendar.R | 2 R/clean.R | 3 R/errors.R | 2 R/ets.R | 10 --- R/findfrequency.R | 2 R/fitBATS.R | 5 - R/fitTBATS.R | 11 --- R/forecast.R | 14 ++-- R/forecast2.R | 9 -- R/forecastBATS.R | 1 R/forecastTBATS.R | 1 R/getResponse.R | 1 R/ggplot.R | 9 -- R/graph.R | 2 R/guerrero.R | 2 R/lm.R | 1 R/makeMatrices.R | 5 - R/makeParamVector.R | 1 R/mforecast.R | 2 R/modelAR.R | 2 R/mstl.R | 1 R/naive.R | 1 R/newarima2.R | 7 -- R/nnetar.R | 2 R/seasadj.R | 1 R/simulate.R | 4 - R/spline.R | 1 R/tbats.R | 4 - R/tscv.R | 1 R/whichmodels.R | 1 README.md | 1 build/vignette.rds |binary inst/doc/JSS2008.pdf |binary man/BoxCox.Rd | 4 - man/forecast-package.Rd | 9 +- src/calcBATS.cpp | 8 -- src/calcBATS.h | 1 src/calcTBATS.cpp | 7 -- src/etsTargetFunction.cpp | 5 - src/etsTargetFunction.h | 1 src/etsTargetFunctionWrapper.cpp | 6 - src/etspolyroot.c | 7 -- src/makeBATSMatrices.cpp | 11 --- src/makeTBATSMatrices.cpp | 8 -- src/updateMatrices.cpp | 4 - src/updateTBATSMatrices.cpp | 3 tests/testthat/test-newarima2.R | 1 tests/testthat/test-spline.R | 1 vignettes/JSS-paper.bib | 2 61 files changed, 119 insertions(+), 277 deletions(-)
Title: Classes and Methods for Trajectory Data
Description: Classes and methods for trajectory data, with support for nesting individual Track objects in track sets (Tracks) and track sets for different entities in collections of Tracks. Methods include selection, generalization, aggregation, intersection, simulation, and plotting.
Author: Edzer Pebesma [aut, cre] ,
Benedikt Klus [aut],
Benedikt Graeler [ctb],
Nikolai Gorte [ctb],
Mehdi Moradi [aut]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between trajectories versions 0.2-4 dated 2022-09-29 and 0.2-5 dated 2022-11-20
DESCRIPTION | 10 +++++----- MD5 | 18 +++++++++--------- R/Trackstat.R | 24 ++++++++++++------------ build/vignette.rds |binary inst/doc/article.pdf |binary man/Kinhom.Track.Rd | 6 +++--- man/Track.idw.Rd | 2 +- man/chimaps.Rd | 2 +- man/density.list.Rd | 2 +- man/pcfinhom.Track.Rd | 2 +- 10 files changed, 33 insertions(+), 33 deletions(-)
Title: Simulator for Spatially Resolved Transcriptomics
Description: An independent, reproducible, and flexible Spatially Resolved Transcriptomics (SRT) simulation framework that can be used to facilitate the development of SRT analytical methods for a wide variety of SRT-specific analyses. It utilizes spatial localization information to simulate SRT expression count data in a reproducible and scalable fashion. Two major simulation schemes are implemented in 'SRTsim': reference-based and reference-free.
Author: Jiaqiang Zhu [aut, ctb, cre] ,
Lulu Shang [aut] ,
Xiang Zhou [aut]
Maintainer: Jiaqiang Zhu <jiaqiang@umich.edu>
Diff between SRTsim versions 0.99.2 dated 2022-06-24 and 0.99.3 dated 2022-11-20
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- inst/doc/SRTsim.R | 1 - inst/doc/SRTsim.Rmd | 2 -- inst/doc/SRTsim.html | 47 ++++++++++++++++++++--------------------------- vignettes/SRTsim.Rmd | 2 -- 6 files changed, 29 insertions(+), 41 deletions(-)
Title: 'NoSQL' Database Connector
Description: Simplified document database access and manipulation,
providing a common API across supported 'NoSQL' databases
'Elasticsearch', 'CouchDB', 'MongoDB' as well as
'SQLite/JSON1', 'PostgreSQL', and 'DuckDB'.
Author: Ralf Herold [aut, cre] ,
Scott Chamberlain [aut] ,
Rich FitzJohn [aut],
Jeroen Ooms [aut]
Maintainer: Ralf Herold <ralf.herold@mailbox.org>
Diff between nodbi versions 0.9.0 dated 2022-10-31 and 0.9.1 dated 2022-11-20
nodbi-0.9.0/nodbi/man/nodbi-defunct.Rd |only nodbi-0.9.0/nodbi/man/src_etcd-defunct.Rd |only nodbi-0.9.0/nodbi/man/src_redis-defunct.Rd |only nodbi-0.9.1/nodbi/DESCRIPTION | 10 - nodbi-0.9.1/nodbi/MD5 | 47 +++----- nodbi-0.9.1/nodbi/NAMESPACE | 2 nodbi-0.9.1/nodbi/NEWS.md | 15 +- nodbi-0.9.1/nodbi/R/create.R | 144 +++++++++++++++----------- nodbi-0.9.1/nodbi/R/delete.R | 6 - nodbi-0.9.1/nodbi/R/exists.R | 3 nodbi-0.9.1/nodbi/R/get.R | 13 +- nodbi-0.9.1/nodbi/R/nodbi-package.R | 16 +- nodbi-0.9.1/nodbi/R/query.R | 3 nodbi-0.9.1/nodbi/R/src.R | 23 ++-- nodbi-0.9.1/nodbi/R/src_duckdb.R | 9 + nodbi-0.9.1/nodbi/R/src_postgres.R | 15 ++ nodbi-0.9.1/nodbi/R/src_sqlite.R | 7 + nodbi-0.9.1/nodbi/R/update.R | 10 + nodbi-0.9.1/nodbi/R/zzz.R | 106 +++++++++++++------ nodbi-0.9.1/nodbi/man/contacts.Rd | 2 nodbi-0.9.1/nodbi/man/diamonds.Rd | 2 nodbi-0.9.1/nodbi/man/mapdata.Rd | 4 nodbi-0.9.1/nodbi/man/nodbi-package.Rd | 1 nodbi-0.9.1/nodbi/man/src.Rd | 12 +- nodbi-0.9.1/nodbi/man/src_duckdb.Rd | 2 nodbi-0.9.1/nodbi/tests/testthat/core-nodbi.R | 84 +++++++++++++++ 26 files changed, 360 insertions(+), 176 deletions(-)
Title: Network Dynamic Temporal Visualizations
Description: Renders dynamic network data from 'networkDynamic' objects as movies, interactive animations, or other representations of changing relational structures and attributes.
Author: Skye Bender-deMoll [cre, aut],
Martina Morris [ctb]
Maintainer: Skye Bender-deMoll <skyebend@uw.edu>
Diff between ndtv versions 0.13.2 dated 2021-11-02 and 0.13.3 dated 2022-11-20
ChangeLog | 3 +++ DESCRIPTION | 10 +++++----- LICENSE | 6 +++--- MD5 | 30 +++++++++++++++--------------- R/animate.interpolation.R | 4 ++-- R/export.movie.R | 20 +++++++++++--------- R/render.d3_animation.R | 12 +++++++----- build/partial.rdb |binary build/vignette.rds |binary inst/doc/ndtv.R | 46 +++++++++++++++++++++++++++++++--------------- inst/doc/ndtv.Rnw | 38 +++++++++++++++++++++++++++----------- inst/doc/ndtv.pdf |binary man/compute.animation.Rd | 2 +- man/ndtv-package.Rd | 6 +++--- man/render.d3movie.Rd | 6 +++--- vignettes/ndtv.Rnw | 38 +++++++++++++++++++++++++++----------- 16 files changed, 138 insertions(+), 83 deletions(-)
Title: Shadow and Glow Geoms for 'ggplot2'
Description: A collection of Geoms for R's 'ggplot2' library. geom_shadowpath(), geom_shadowline(),
geom_shadowstep() and geom_shadowpoint() functions draw a shadow below lines to make busy plots more
aesthetically pleasing. geom_glowpath(), geom_glowline(), geom_glowstep() and geom_glowpoint() add a
neon glow around lines to get a steampunk style.
Author: Marc Menem [aut, cre]
Maintainer: Marc Menem <marc.menem@m4x.org>
Diff between ggshadow versions 0.0.2 dated 2021-01-22 and 0.0.5 dated 2022-11-20
DESCRIPTION | 12 +- MD5 | 40 +++---- NAMESPACE | 34 +++++ NEWS.md |only R/geom-glowpath.r | 33 +++-- R/geom-glowpoint.r | 6 - R/geom-shadowpath.r | 23 ++-- R/geom-shadowpoint.r | 6 - R/internal-doc.r | 2 R/scale-shadow.r | 262 ++++++++++++++++++++++++++++++++++++++-------- README.md |only build/vignette.rds |binary inst/doc/ggshadow.html | 181 +++++++++++++++++++------------ man/geom_glowpath.Rd | 8 - man/geom_shadowpath.Rd | 8 - man/scale_brewer.Rd | 23 ---- man/scale_colour_hue.Rd | 9 + man/scale_colour_steps.Rd | 22 +-- man/scale_gradient.Rd | 22 ++- man/scale_grey.Rd | 9 + man/scale_manual.Rd | 6 - man/scale_viridis.Rd | 25 ++-- 22 files changed, 501 insertions(+), 230 deletions(-)
Title: Deep Gaussian Mixture Models
Description: Deep Gaussian mixture models as proposed by Viroli and McLachlan (2019)
<doi:10.1007/s11222-017-9793-z> provide a generalization of classical Gaussian mixtures
to multiple layers. Each layer contains a set of latent variables that follow a mixture of
Gaussian distributions. To avoid overparameterized solutions, dimension reduction is
applied at each layer by way of factor models.
Author: Cinzia Viroli, Geoffrey J. McLachlan
Maintainer: Suren Rathnayake <surenr@gmail.com>
Diff between deepgmm versions 0.1.62 dated 2020-10-20 and 0.2.1 dated 2022-11-20
deepgmm-0.1.62/deepgmm/R/ppca_para.R |only deepgmm-0.1.62/deepgmm/tests |only deepgmm-0.2.1/deepgmm/DESCRIPTION | 10 deepgmm-0.2.1/deepgmm/MD5 | 23 -- deepgmm-0.2.1/deepgmm/NAMESPACE | 20 - deepgmm-0.2.1/deepgmm/R/deepgmm.R | 42 --- deepgmm-0.2.1/deepgmm/R/factanal_para.R | 6 deepgmm-0.2.1/deepgmm/R/fix_para.R |only deepgmm-0.2.1/deepgmm/R/initial_clustering.R | 2 deepgmm-0.2.1/deepgmm/R/model.selection.R | 101 +++++---- deepgmm-0.2.1/deepgmm/R/valid_args.R | 4 deepgmm-0.2.1/deepgmm/man/deepgmm.Rd | 302 +++++++++++++-------------- deepgmm-0.2.1/deepgmm/man/model_selection.Rd | 168 +++++++-------- 13 files changed, 335 insertions(+), 343 deletions(-)
Title: Retrieve and Analyze Clinical Trials in Public Registers
Description: A system for querying, retrieving and analyzing
protocol- and results-related information on clinical trials from
three public registers, the 'European Union Clinical Trials Register'
('EUCTR', <https://www.clinicaltrialsregister.eu/>),
'ClinicalTrials.gov' ('CTGOV', <https://clinicaltrials.gov/>) and
the 'ISRCTN' (<http://www.isrctn.com/>).
Trial information is downloaded, converted and stored in a database
('PostgreSQL', 'SQLite', 'DuckDB' or 'MongoDB'; via package 'nodbi').
Functions are included to identify deduplicated records,
to easily find and extract variables (fields) of interest even
from complex nesting as used by the registers, and
to update previous queries.
The package can be used for meta-analysis and trend-analysis of
the design and conduct as well as for results of clinical trials.
Author: Ralf Herold [aut, cre]
Maintainer: Ralf Herold <ralf.herold@mailbox.org>
Diff between ctrdata versions 1.11.0 dated 2022-11-02 and 1.11.1 dated 2022-11-20
ctrdata-1.11.0/ctrdata/inst/tinytest/test_ctrdata_duckdb_ctgov.R |only ctrdata-1.11.0/ctrdata/inst/tinytest/test_ctrdata_duckdb_euctr.R |only ctrdata-1.11.0/ctrdata/inst/tinytest/test_ctrdata_duckdb_isrctn.R |only ctrdata-1.11.1/ctrdata/DESCRIPTION | 8 ctrdata-1.11.1/ctrdata/MD5 | 38 ++-- ctrdata-1.11.1/ctrdata/NAMESPACE | 10 - ctrdata-1.11.1/ctrdata/NEWS.md | 13 + ctrdata-1.11.1/ctrdata/R/ctrdata-package.R | 30 +-- ctrdata-1.11.1/ctrdata/R/ctrdata-registers.R | 21 +- ctrdata-1.11.1/ctrdata/R/main.R | 90 +++++----- ctrdata-1.11.1/ctrdata/R/utils.R | 60 +++++- ctrdata-1.11.1/ctrdata/README.md | 25 +- ctrdata-1.11.1/ctrdata/build/vignette.rds |binary ctrdata-1.11.1/ctrdata/inst/tinytest/ctrdata_ctgov.R | 4 ctrdata-1.11.1/ctrdata/inst/tinytest/ctrdata_euctr.R | 4 ctrdata-1.11.1/ctrdata/inst/tinytest/more_test_ctrdata_duckdb_ctgov.R |only ctrdata-1.11.1/ctrdata/inst/tinytest/more_test_ctrdata_duckdb_euctr.R |only ctrdata-1.11.1/ctrdata/inst/tinytest/more_test_ctrdata_duckdb_isrctn.R |only ctrdata-1.11.1/ctrdata/inst/tinytest/more_test_ctrdata_param_checks.R | 13 - ctrdata-1.11.1/ctrdata/inst/tinytest/test_ctrdata_other_functions.R | 47 +++++ ctrdata-1.11.1/ctrdata/man/ctrdata-package.Rd | 34 ++- ctrdata-1.11.1/ctrdata/man/ctrdata-registers.Rd | 21 +- ctrdata-1.11.1/ctrdata/man/dfName2Value.Rd | 2 23 files changed, 269 insertions(+), 151 deletions(-)
Title: Spatial Analysis and Modelling Utilities
Description: Utilities to support spatial data manipulation, query, sampling
and modelling in ecological applications. Functions include models for species
population density, spatial smoothing, multivariate separability, point process
model for creating pseudo- absences and sub-sampling, Quadrant-based sampling and
analysis, auto-logistic modeling, sampling models, cluster optimization, statistical
exploratory tools and raster-based metrics.
Author: Jeffrey S. Evans [aut, cre] ,
Melanie A. Murphy [ctb],
Karthik Ram [ctb]
Maintainer: Jeffrey S. Evans <jeffrey_evans@tnc.org>
Diff between spatialEco versions 1.3-7 dated 2021-05-14 and 2.0-0 dated 2022-11-20
spatialEco-1.3-7/spatialEco/R/DAYMET_tiles-data.R |only spatialEco-1.3-7/spatialEco/R/colinear.R |only spatialEco-1.3-7/spatialEco/R/is.whole.R |only spatialEco-1.3-7/spatialEco/R/sp.kde.R |only spatialEco-1.3-7/spatialEco/data/DAYMET_tiles.rda |only spatialEco-1.3-7/spatialEco/data/elev.rda |only spatialEco-1.3-7/spatialEco/man/DAYMET_tiles.Rd |only spatialEco-1.3-7/spatialEco/man/is.whole.Rd |only spatialEco-1.3-7/spatialEco/man/sp.kde.Rd |only spatialEco-2.0-0/spatialEco/DESCRIPTION | 39 spatialEco-2.0-0/spatialEco/MD5 | 393 ++++----- spatialEco-2.0-0/spatialEco/NAMESPACE | 15 spatialEco-2.0-0/spatialEco/R/all_pairwise.R |only spatialEco-2.0-0/spatialEco/R/annulus.matrix.R | 1 spatialEco-2.0-0/spatialEco/R/ants-data.R | 1 spatialEco-2.0-0/spatialEco/R/background.R | 109 +- spatialEco-2.0-0/spatialEco/R/bbox_poly.R |only spatialEco-2.0-0/spatialEco/R/bearing.distance.R | 1 spatialEco-2.0-0/spatialEco/R/breeding.density.R | 89 +- spatialEco-2.0-0/spatialEco/R/built.index.R | 69 - spatialEco-2.0-0/spatialEco/R/cgls_urls.R | 30 spatialEco-2.0-0/spatialEco/R/class.comparison.R | 280 ------ spatialEco-2.0-0/spatialEco/R/collinear.R | 17 spatialEco-2.0-0/spatialEco/R/combine.R | 99 -- spatialEco-2.0-0/spatialEco/R/correlogram.R | 59 - spatialEco-2.0-0/spatialEco/R/cross.tab.R | 40 spatialEco-2.0-0/spatialEco/R/curvature.R | 30 spatialEco-2.0-0/spatialEco/R/dahi.R | 22 spatialEco-2.0-0/spatialEco/R/dispersion.R | 18 spatialEco-2.0-0/spatialEco/R/dissection.R | 21 spatialEco-2.0-0/spatialEco/R/download.hansen.R | 81 - spatialEco-2.0-0/spatialEco/R/effect.size.R | 2 spatialEco-2.0-0/spatialEco/R/erase.points.R | 86 + spatialEco-2.0-0/spatialEco/R/explode.R | 38 spatialEco-2.0-0/spatialEco/R/extract_vertices.R | 109 -- spatialEco-2.0-0/spatialEco/R/gaussian.kernel.R | 28 spatialEco-2.0-0/spatialEco/R/geo.buffer.R | 59 - spatialEco-2.0-0/spatialEco/R/hexagons.R | 58 - spatialEco-2.0-0/spatialEco/R/hli.R | 64 - spatialEco-2.0-0/spatialEco/R/hli.pt.R |only spatialEco-2.0-0/spatialEco/R/hsp.R | 32 spatialEco-2.0-0/spatialEco/R/idw.smoothing.R | 93 +- spatialEco-2.0-0/spatialEco/R/insert.R | 2 spatialEco-2.0-0/spatialEco/R/kendall.R | 42 spatialEco-2.0-0/spatialEco/R/knn.R | 3 spatialEco-2.0-0/spatialEco/R/logistic.regression.R | 196 ++-- spatialEco-2.0-0/spatialEco/R/max_extent.R | 56 - spatialEco-2.0-0/spatialEco/R/mean_angle.R |only spatialEco-2.0-0/spatialEco/R/moments.R | 4 spatialEco-2.0-0/spatialEco/R/nni.R | 40 spatialEco-2.0-0/spatialEco/R/o.ring.R | 108 +- spatialEco-2.0-0/spatialEco/R/oli.aws.R | 2 spatialEco-2.0-0/spatialEco/R/optimal.k.R | 65 - spatialEco-2.0-0/spatialEco/R/optimized.sample.variance.R | 39 spatialEco-2.0-0/spatialEco/R/overlap.R | 20 spatialEco-2.0-0/spatialEco/R/parea.sample.R | 81 - spatialEco-2.0-0/spatialEco/R/point.in.poly.R | 135 --- spatialEco-2.0-0/spatialEco/R/polyPerimeter.R | 35 spatialEco-2.0-0/spatialEco/R/poly_trend.R |only spatialEco-2.0-0/spatialEco/R/polygon_extract.R | 145 --- spatialEco-2.0-0/spatialEco/R/pp.subsample.R | 349 ++++---- spatialEco-2.0-0/spatialEco/R/print.poly.trend.R |only spatialEco-2.0-0/spatialEco/R/proximity.index.R | 101 +- spatialEco-2.0-0/spatialEco/R/pseudo.absence.R | 477 +++++------ spatialEco-2.0-0/spatialEco/R/quadrats.R | 81 + spatialEco-2.0-0/spatialEco/R/random.raster.R | 137 +-- spatialEco-2.0-0/spatialEco/R/raster.Zscore.R | 21 spatialEco-2.0-0/spatialEco/R/raster.change.R | 352 +++----- spatialEco-2.0-0/spatialEco/R/raster.deviation.R | 67 - spatialEco-2.0-0/spatialEco/R/raster.downscale.R | 215 +++- spatialEco-2.0-0/spatialEco/R/raster.entropy.R | 69 - spatialEco-2.0-0/spatialEco/R/raster.gaussian.smooth.R | 52 - spatialEco-2.0-0/spatialEco/R/raster.invert.R | 27 spatialEco-2.0-0/spatialEco/R/raster.kendall.R | 23 spatialEco-2.0-0/spatialEco/R/raster.mds.R | 25 spatialEco-2.0-0/spatialEco/R/raster.modified.ttest.R | 251 ++--- spatialEco-2.0-0/spatialEco/R/raster.moments.R | 27 spatialEco-2.0-0/spatialEco/R/raster.transformations.R | 45 - spatialEco-2.0-0/spatialEco/R/raster.vol.R | 65 - spatialEco-2.0-0/spatialEco/R/rasterCorrelation.R | 90 -- spatialEco-2.0-0/spatialEco/R/rasterDistance.R | 115 +- spatialEco-2.0-0/spatialEco/R/remove.holes.R | 97 +- spatialEco-2.0-0/spatialEco/R/remove_duplicates.R |only spatialEco-2.0-0/spatialEco/R/rotate.polygon.R | 24 spatialEco-2.0-0/spatialEco/R/sa.trans.R | 10 spatialEco-2.0-0/spatialEco/R/sample.annulus.R | 84 + spatialEco-2.0-0/spatialEco/R/sample.line.R | 127 -- spatialEco-2.0-0/spatialEco/R/sample.poly.R | 41 spatialEco-2.0-0/spatialEco/R/sample.transect.R | 115 +- spatialEco-2.0-0/spatialEco/R/sar.R | 43 spatialEco-2.0-0/spatialEco/R/sf.kde.R |only spatialEco-2.0-0/spatialEco/R/sg.smooth.R | 22 spatialEco-2.0-0/spatialEco/R/sieve.R |only spatialEco-2.0-0/spatialEco/R/similarity.R | 13 spatialEco-2.0-0/spatialEco/R/smooth.time.series.R | 88 -- spatialEco-2.0-0/spatialEco/R/sobel.R | 27 spatialEco-2.0-0/spatialEco/R/sp.na.omit.R | 61 - spatialEco-2.0-0/spatialEco/R/spatial.select.R | 208 +--- spatialEco-2.0-0/spatialEco/R/spherical.sd.R | 46 - spatialEco-2.0-0/spatialEco/R/srr.R | 27 spatialEco-2.0-0/spatialEco/R/stratified.random.R | 141 +-- spatialEco-2.0-0/spatialEco/R/subsample.distance.R | 82 - spatialEco-2.0-0/spatialEco/R/swvi.R | 72 - spatialEco-2.0-0/spatialEco/R/time_to_event.R | 56 - spatialEco-2.0-0/spatialEco/R/topo.distance.R | 82 - spatialEco-2.0-0/spatialEco/R/tpi.R | 32 spatialEco-2.0-0/spatialEco/R/trasp.R | 17 spatialEco-2.0-0/spatialEco/R/tri.R | 44 - spatialEco-2.0-0/spatialEco/R/vrm.R | 57 - spatialEco-2.0-0/spatialEco/R/wt.centroids.R | 88 +- spatialEco-2.0-0/spatialEco/R/zonal.stats.R | 82 - spatialEco-2.0-0/spatialEco/data/ants.rda |binary spatialEco-2.0-0/spatialEco/data/cor.data.rda |binary spatialEco-2.0-0/spatialEco/data/pu.rda |binary spatialEco-2.0-0/spatialEco/inst/CITATION | 7 spatialEco-2.0-0/spatialEco/inst/NEWS | 33 spatialEco-2.0-0/spatialEco/inst/extdata |only spatialEco-2.0-0/spatialEco/man/all_pairwise.Rd |only spatialEco-2.0-0/spatialEco/man/ants.Rd | 3 spatialEco-2.0-0/spatialEco/man/background.Rd | 63 - spatialEco-2.0-0/spatialEco/man/bbox_poly.Rd |only spatialEco-2.0-0/spatialEco/man/breeding.density.Rd | 39 spatialEco-2.0-0/spatialEco/man/built.index.Rd | 39 spatialEco-2.0-0/spatialEco/man/cgls_urls.Rd | 32 spatialEco-2.0-0/spatialEco/man/class.comparison.Rd | 90 -- spatialEco-2.0-0/spatialEco/man/collinear.Rd | 32 spatialEco-2.0-0/spatialEco/man/combine.Rd | 57 - spatialEco-2.0-0/spatialEco/man/correlogram.Rd | 25 spatialEco-2.0-0/spatialEco/man/cross.tab.Rd | 33 spatialEco-2.0-0/spatialEco/man/curvature.Rd | 17 spatialEco-2.0-0/spatialEco/man/dahi.Rd | 9 spatialEco-2.0-0/spatialEco/man/dispersion.Rd | 18 spatialEco-2.0-0/spatialEco/man/dissection.Rd | 10 spatialEco-2.0-0/spatialEco/man/download.hansen.Rd | 70 - spatialEco-2.0-0/spatialEco/man/erase.point.Rd | 61 - spatialEco-2.0-0/spatialEco/man/explode.Rd | 16 spatialEco-2.0-0/spatialEco/man/extract.vertices.Rd | 59 - spatialEco-2.0-0/spatialEco/man/figures |only spatialEco-2.0-0/spatialEco/man/gaussian.kernel.Rd | 18 spatialEco-2.0-0/spatialEco/man/geo.buffer.Rd | 28 spatialEco-2.0-0/spatialEco/man/hexagons.Rd | 24 spatialEco-2.0-0/spatialEco/man/hli.Rd | 10 spatialEco-2.0-0/spatialEco/man/hli.pt.Rd |only spatialEco-2.0-0/spatialEco/man/hsp.Rd | 8 spatialEco-2.0-0/spatialEco/man/idw.smoothing.Rd | 34 spatialEco-2.0-0/spatialEco/man/kendall.Rd | 69 - spatialEco-2.0-0/spatialEco/man/knn.Rd | 3 spatialEco-2.0-0/spatialEco/man/logistic.regression.Rd | 126 +- spatialEco-2.0-0/spatialEco/man/max_extent.Rd | 27 spatialEco-2.0-0/spatialEco/man/mean_angle.Rd |only spatialEco-2.0-0/spatialEco/man/nni.Rd | 21 spatialEco-2.0-0/spatialEco/man/o.ring.Rd | 2 spatialEco-2.0-0/spatialEco/man/oli.asw.Rd | 2 spatialEco-2.0-0/spatialEco/man/optimal.k.Rd | 31 spatialEco-2.0-0/spatialEco/man/optimized.sample.variance.Rd | 37 spatialEco-2.0-0/spatialEco/man/overlap.Rd | 4 spatialEco-2.0-0/spatialEco/man/parea.sample.Rd | 45 - spatialEco-2.0-0/spatialEco/man/point.in.poly.Rd | 93 -- spatialEco-2.0-0/spatialEco/man/polyPerimeter.Rd | 17 spatialEco-2.0-0/spatialEco/man/poly_trend.Rd |only spatialEco-2.0-0/spatialEco/man/polygon_extract.Rd | 100 -- spatialEco-2.0-0/spatialEco/man/pp.subsample.Rd | 29 spatialEco-2.0-0/spatialEco/man/print.poly.trend.Rd |only spatialEco-2.0-0/spatialEco/man/proximity.index.Rd | 58 - spatialEco-2.0-0/spatialEco/man/pseudo.absence.Rd | 85 - spatialEco-2.0-0/spatialEco/man/quadrats.Rd | 47 - spatialEco-2.0-0/spatialEco/man/random.raster.Rd | 50 - spatialEco-2.0-0/spatialEco/man/raster.Zscore.Rd | 9 spatialEco-2.0-0/spatialEco/man/raster.change.Rd | 97 -- spatialEco-2.0-0/spatialEco/man/raster.deviation.Rd | 23 spatialEco-2.0-0/spatialEco/man/raster.downscale.Rd | 129 ++ spatialEco-2.0-0/spatialEco/man/raster.entropy.Rd | 42 spatialEco-2.0-0/spatialEco/man/raster.gaussian.smooth.Rd | 49 - spatialEco-2.0-0/spatialEco/man/raster.invert.Rd | 18 spatialEco-2.0-0/spatialEco/man/raster.kendall.Rd | 14 spatialEco-2.0-0/spatialEco/man/raster.mds.Rd | 16 spatialEco-2.0-0/spatialEco/man/raster.modified.ttest.Rd | 96 +- spatialEco-2.0-0/spatialEco/man/raster.moments.Rd | 19 spatialEco-2.0-0/spatialEco/man/raster.transformation.Rd | 31 spatialEco-2.0-0/spatialEco/man/raster.vol.Rd | 26 spatialEco-2.0-0/spatialEco/man/rasterCorrelation.Rd | 35 spatialEco-2.0-0/spatialEco/man/rasterDistance.Rd | 68 - spatialEco-2.0-0/spatialEco/man/remove.holes.Rd | 50 - spatialEco-2.0-0/spatialEco/man/remove_duplicates.Rd |only spatialEco-2.0-0/spatialEco/man/rotate.polygon.Rd | 24 spatialEco-2.0-0/spatialEco/man/sa.trans.Rd | 10 spatialEco-2.0-0/spatialEco/man/sample.annulus.Rd | 54 - spatialEco-2.0-0/spatialEco/man/sample.line.Rd | 91 -- spatialEco-2.0-0/spatialEco/man/sample.poly.Rd | 30 spatialEco-2.0-0/spatialEco/man/sampleTransect.Rd | 53 - spatialEco-2.0-0/spatialEco/man/sar.Rd | 18 spatialEco-2.0-0/spatialEco/man/sf.kde.Rd |only spatialEco-2.0-0/spatialEco/man/sg.smooth.Rd | 16 spatialEco-2.0-0/spatialEco/man/sieve.Rd |only spatialEco-2.0-0/spatialEco/man/similarity.Rd | 13 spatialEco-2.0-0/spatialEco/man/smooth.time.series.Rd | 61 - spatialEco-2.0-0/spatialEco/man/sobal.Rd | 11 spatialEco-2.0-0/spatialEco/man/sp.na.omit.Rd | 42 spatialEco-2.0-0/spatialEco/man/spatial.select.Rd | 130 +- spatialEco-2.0-0/spatialEco/man/spherical.sd.Rd | 20 spatialEco-2.0-0/spatialEco/man/srr.Rd | 11 spatialEco-2.0-0/spatialEco/man/stratified.random.Rd | 62 - spatialEco-2.0-0/spatialEco/man/subsample.distance.Rd | 58 - spatialEco-2.0-0/spatialEco/man/swvi.Rd | 19 spatialEco-2.0-0/spatialEco/man/time_to_event.Rd | 42 spatialEco-2.0-0/spatialEco/man/topo.distance.Rd | 47 - spatialEco-2.0-0/spatialEco/man/tpi.Rd | 16 spatialEco-2.0-0/spatialEco/man/trasp.Rd | 10 spatialEco-2.0-0/spatialEco/man/tri.Rd | 16 spatialEco-2.0-0/spatialEco/man/vrm.Rd | 16 spatialEco-2.0-0/spatialEco/man/wt.centroid.Rd | 46 - spatialEco-2.0-0/spatialEco/man/zonal.stats.Rd | 50 - 212 files changed, 4779 insertions(+), 5921 deletions(-)
Title: Tools for Two-Dimensional Monte-Carlo Simulations
Description: A complete framework to build and study Two-Dimensional Monte-Carlo simulations, aka Second-Order Monte-Carlo simulations. Also includes various distributions (pert, triangular, Bernoulli, empirical discrete and continuous).
Author: Regis Pouillot [aut, cre],
Marie-Laure Delignette-Muller [ctb],
Jean-Baptiste Denis [ctb]
Maintainer: Regis Pouillot <rpouillot@yahoo.fr>
Diff between mc2d versions 0.1-21 dated 2021-07-05 and 0.1-22 dated 2022-11-20
mc2d-0.1-21/mc2d/README.md |only mc2d-0.1-21/mc2d/data/ec.r |only mc2d-0.1-22/mc2d/DESCRIPTION | 8 ++++---- mc2d-0.1-22/mc2d/MD5 | 15 +++++++-------- mc2d-0.1-22/mc2d/R/pert.R | 2 +- mc2d-0.1-22/mc2d/build/vignette.rds |binary mc2d-0.1-22/mc2d/data/ec.rda |only mc2d-0.1-22/mc2d/inst/NEWS | 7 +++++++ mc2d-0.1-22/mc2d/inst/doc/docmcEnglish.pdf |binary mc2d-0.1-22/mc2d/inst/doc/mc2dLmEnglish.pdf |binary 10 files changed, 19 insertions(+), 13 deletions(-)
Title: Computationally Efficient Maximum Likelihood Identification of
Linear Dynamical Systems
Description: Provides implementations of computationally efficient maximum likelihood parameter estimation algorithms for models that represent linear dynamical systems. Currently, one such algorithm is implemented for the one-dimensional cumulative structural equation model with shock-error output measurement equation and assumptions of normality and independence. The corresponding scientific paper is yet to be published, therefore the relevant reference will be provided later.
Author: Vytautas Dulskis [cre, aut],
Leonidas Sakalauskas [aut]
Maintainer: Vytautas Dulskis <vytautas.dulskis@gmail.com>
Diff between EMLI versions 0.1.0 dated 2022-05-17 and 0.2.0 dated 2022-11-20
EMLI-0.1.0/EMLI/R/evaluate_identification.R |only EMLI-0.1.0/EMLI/R/identify_model.R |only EMLI-0.1.0/EMLI/man/evaluate_identification.Rd |only EMLI-0.1.0/EMLI/man/identify_model.Rd |only EMLI-0.2.0/EMLI/DESCRIPTION | 13 ++-- EMLI-0.2.0/EMLI/MD5 | 30 ++++++----- EMLI-0.2.0/EMLI/NAMESPACE | 5 + EMLI-0.2.0/EMLI/NEWS.md | 14 ++++- EMLI-0.2.0/EMLI/R/calculate_1D_likelihood.R | 5 - EMLI-0.2.0/EMLI/R/calculate_likelihood.R |only EMLI-0.2.0/EMLI/R/calculate_recursive.R | 29 ++++------ EMLI-0.2.0/EMLI/R/calculate_selected.R | 11 +--- EMLI-0.2.0/EMLI/R/estimate_parameters.R |only EMLI-0.2.0/EMLI/R/evaluate_estimates.R |only EMLI-0.2.0/EMLI/R/generate_data.R | 66 ++++++++++--------------- EMLI-0.2.0/EMLI/R/minimize_1D_likelihood.R | 33 +++++------- EMLI-0.2.0/EMLI/R/minimize_likelihood.R | 13 ++-- EMLI-0.2.0/EMLI/man/calculate_likelihood.Rd |only EMLI-0.2.0/EMLI/man/estimate_parameters.Rd |only EMLI-0.2.0/EMLI/man/evaluate_estimates.Rd |only EMLI-0.2.0/EMLI/man/generate_data.Rd | 4 - 21 files changed, 108 insertions(+), 115 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-07-02 0.0.1.5.2
2015-06-25 0.0.1.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-01-13 2.0.2
2019-12-15 2.0.1
2016-06-01 2.0.0
2014-08-09 1.0.1
2014-04-02 1.0.0
Title: A Toolkit for Using Whole Building Simulation Program
'EnergyPlus'
Description: A rich toolkit of using the whole building
simulation program 'EnergyPlus'(<https://energyplus.net>), which
enables programmatic navigation, modification of 'EnergyPlus' models
and makes it less painful to do parametric simulations and analysis.
Author: Hongyuan Jia [aut, cre] ,
Adrian Chong [aut]
Maintainer: Hongyuan Jia <hongyuanjia@cqust.edu.cn>
Diff between eplusr versions 0.15.2 dated 2022-08-19 and 0.15.3 dated 2022-11-20
DESCRIPTION | 8 MD5 | 20 NAMESPACE | 709 +-- NEWS.md | 6 R/constants.R | 292 - R/impl-epw.R | 11 R/impl-idf.R | 9252 +++++++++++++++++++++---------------------- R/impl-sql.R | 1489 +++--- man/expand_idf_regex.Rd | 82 tests/testthat/test-assert.R | 141 tests/testthat/test-run.R | 1624 +++---- 11 files changed, 6823 insertions(+), 6811 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-03-15 0.0.4.4
2022-03-03 0.0.4.3
2022-02-07 0.0.4.1
2021-11-23 0.0.3.9
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-10-20 0.32.2
2020-03-19 0.31.1
2020-01-22 0.31
2018-05-25 0.27
2018-05-10 0.22
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-10-11 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-07-31 0.2
2013-07-05 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-05-31 2.2.0
2019-03-07 2.1.5
2018-08-15 2.1.2
2018-05-14 2.1.1
2017-07-19 2.0.4
2016-06-06 2.0.0
2015-11-17 1.3.2
2015-06-17 1.3.0
2014-06-04 1.2.6
2013-11-28 1.2.5
2013-09-08 1.2.4
2013-07-18 1.2.2
2013-05-31 1.2.0
2013-04-15 1.1.14
2013-01-18 1.1.11
2012-11-30 1.1.7
2012-10-10 1.1.2
2012-10-08 1.1.1
2012-04-20 1.0.2
2012-03-16 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-06-06 1.0.2
2016-07-28 1.0.1
2016-06-02 1.0.0
2012-12-01 0.0.2
2012-04-13 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-03-18 0.2
2016-10-08 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-11-30 0.91.2.2
2015-07-02 0.91.1.5
2013-05-14 0.91.1
2012-07-30 0.90
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-30 1.16.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-04-28 1.13
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-08-12 1.2
2016-03-31 1.1
2015-04-29 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-07-20 0.26
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-10-30 1.2.3
2015-12-06 1.2.1
2015-08-27 1.1.1
2015-08-04 1.1.0
2015-07-31 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-09-26 1.2-0
2016-09-05 1.1-0
2016-02-18 1.0-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-05-06 1.2.0
2021-04-28 1.1.0
2021-04-18 1.0.1
2021-04-14 1.0.0
2020-04-09 0.1.1
2020-01-13 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-30 1.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-05-14 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-09-19 0.0.4
2015-04-18 0.0.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2016-10-07 0.1.60
2012-05-04 0.1.31
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-05-20 1.8.2
Title: Create Visuals for Publication
Description: A small set of functions to aid in the production of visuals in ggplot2. Includes minimalist themes with transparent backgrounds and tools for building survival curves with risk tables.
Author: Eric Finnesgard [aut, cre]
Maintainer: Eric Finnesgard <efinite@outlook.com>
Diff between utile.visuals versions 0.3.1 dated 2022-02-14 and 0.3.2 dated 2022-11-20
DESCRIPTION | 10 +- MD5 | 22 ++--- NAMESPACE | 16 +-- NEWS.md | 69 ++++++++-------- R/gg.R | 102 +++++++++++------------ R/themes.R | 16 +-- R/utils.R | 30 +++--- man/append_table.Rd | 206 ++++++++++++++++++++++++------------------------ man/geom_stepconfint.Rd | 126 ++++++++++++++--------------- man/ggrisktable.Rd | 88 ++++++++++---------- man/theme_basic.Rd | 70 ++++++++-------- man/theme_risk.Rd | 70 ++++++++-------- 12 files changed, 415 insertions(+), 410 deletions(-)
Title: Build Tables for Publication
Description: A collection of functions to make building customized ready-to-export tables for publication purposes easier and creating summaries of large datasets for review a breeze.
Author: Eric Finnesgard [aut, cre],
Jennifer Grauberger [aut]
Maintainer: Eric Finnesgard <efinite@outlook.com>
Diff between utile.tables versions 0.2.1 dated 2020-06-14 and 0.2.2 dated 2022-11-20
DESCRIPTION | 9 MD5 | 36 - NAMESPACE | 72 +- NEWS.md | 3 R/build_row.R | 1102 +++++++++++++++++++++--------------------- R/reexports.R | 98 +-- README.md | 22 man/build_model.Rd | 52 - man/build_model.coxph.Rd | 142 ++--- man/build_row.Rd | 54 +- man/build_row.data.frame.Rd | 96 +-- man/build_row.factor.Rd | 144 ++--- man/build_row.logical.Rd | 152 ++--- man/build_row.numeric.Rd | 134 ++--- man/build_table.Rd | 50 - man/build_table.coxph.Rd | 130 ++-- man/build_table.data.frame.Rd | 168 +++--- man/build_table.lm.Rd | 128 ++-- man/reexports.Rd | 52 - 19 files changed, 1323 insertions(+), 1321 deletions(-)
Title: Summarize Data for Publication
Description: A set of tools for preparing and summarizing data for publication purposes. Includes functions for tabulating models, means to produce human-readable summary statistics from raw data, macros for calculating duration of time, and simplistic hypothesis testing tools.
Author: Eric Finnesgard [aut, cre]
Maintainer: Eric Finnesgard <efinite@outlook.com>
Diff between utile.tools versions 0.2.7 dated 2022-02-20 and 0.2.8 dated 2022-11-20
DESCRIPTION | 8 - MD5 | 12 +- NEWS.md | 134 ++++++++++++++-------------- R/calc.R | 250 ++++++++++++++++++++++++++--------------------------- R/paste.R | 2 R/test.R | 164 +++++++++++++++++----------------- man/calc_cumsum.Rd | 54 +++++------ 7 files changed, 313 insertions(+), 311 deletions(-)
Title: Create Waterfall Charts using 'ggplot2' Simply
Description: A not uncommon task for quants is to create 'waterfall charts'. There seems to be no simple way to do this in 'ggplot2' currently. This package contains a single function (waterfall) that simply draws a waterfall chart in a 'ggplot2' object. Some flexibility is provided, though often the object created will need to be modified through a theme.
Author: Hugh Parsonage
Maintainer: Hugh Parsonage <hugh.parsonage+waterfall@gmail.com>
Diff between waterfalls versions 0.1.2 dated 2018-01-25 and 1.0.0 dated 2022-11-20
DESCRIPTION | 12 ++++++------ MD5 | 7 ++++--- NEWS.md |only R/waterfall.R | 13 ++++++++++--- man/waterfall.Rd | 41 ++++++++++++++++++++++++++++++----------- 5 files changed, 50 insertions(+), 23 deletions(-)
Title: 'Shiny' UI Prototype Builder
Description: A 'shiny' application that enables the user to create a prototype UI,
being able to drag and drop UI components before being able to save or download the equivalent R code.
Author: Ashley Baldry [cre, aut],
Sam Parmar [ctb]
Maintainer: Ashley Baldry <arbaldry91@gmail.com>
Diff between designer versions 0.1.0 dated 2022-05-17 and 0.2.0 dated 2022-11-20
designer-0.1.0/designer/inst/app/www/canvas-page-input.js |only designer-0.1.0/designer/inst/app/www/create-element.js |only designer-0.1.0/designer/inst/app/www/designer-app-setup.js |only designer-0.1.0/designer/inst/app/www/designer-app-utils.js |only designer-0.2.0/designer/DESCRIPTION | 22 designer-0.2.0/designer/MD5 | 70 - designer-0.2.0/designer/NAMESPACE | 1 designer-0.2.0/designer/NEWS.md | 28 designer-0.2.0/designer/R/app_server.R | 10 designer-0.2.0/designer/R/app_ui.R | 38 designer-0.2.0/designer/R/cicerone_guide.R | 3 designer-0.2.0/designer/R/json_to_rscript.R | 10 designer-0.2.0/designer/R/mod_canvas_srv.R | 11 designer-0.2.0/designer/R/mod_canvas_ui.R | 54 - designer-0.2.0/designer/R/mod_canvas_utils.R |only designer-0.2.0/designer/R/mod_code_srv.R | 4 designer-0.2.0/designer/R/mod_code_ui.R | 50 - designer-0.2.0/designer/R/mod_options_ui.R | 33 designer-0.2.0/designer/R/mod_options_utils.R |only designer-0.2.0/designer/R/mod_settings_srv.R |only designer-0.2.0/designer/R/mod_settings_ui.R | 9 designer-0.2.0/designer/R/mod_settings_utils.R | 63 - designer-0.2.0/designer/R/mod_sidebar_components.R |only designer-0.2.0/designer/R/mod_sidebar_srv.R | 35 designer-0.2.0/designer/R/mod_sidebar_ui.R | 533 ++++++++++-- designer-0.2.0/designer/R/mod_sidebar_utils.R | 571 ++----------- designer-0.2.0/designer/R/run_app.R | 2 designer-0.2.0/designer/R/ui_utils.R | 72 + designer-0.2.0/designer/README.md | 31 designer-0.2.0/designer/inst/app/www/avatar.png |only designer-0.2.0/designer/inst/app/www/designer.css | 279 +++++- designer-0.2.0/designer/inst/app/www/designer.min.js |only designer-0.2.0/designer/inst/app/www/designer.min.js.map |only designer-0.2.0/designer/inst/doc/designer.Rmd | 4 designer-0.2.0/designer/inst/doc/designer.html | 302 ++++++ designer-0.2.0/designer/inst/srcjs/bs-custom-file-input |only designer-0.2.0/designer/man/component.Rd |only designer-0.2.0/designer/man/component_setting.Rd |only designer-0.2.0/designer/man/designApp.Rd | 2 designer-0.2.0/designer/man/designer-package.Rd | 6 designer-0.2.0/designer/man/sidebarItem.Rd |only designer-0.2.0/designer/tests/testthat/test-lintr.R |only designer-0.2.0/designer/tests/testthat/test-shinytest2.R | 26 designer-0.2.0/designer/vignettes/designer.Rmd | 4 44 files changed, 1512 insertions(+), 761 deletions(-)
Title: See a Forest for the Trees
Description: Get insight into a forest of classification trees, by calculating similarities between the trees, and subsequently clustering them. Each cluster is represented by it's most central cluster member. The package implements the methodology described in Sies & Van Mechelen (2020) <doi:10.1007/s00357-019-09350-4>.
Author: Aniek Sies [aut, cre],
Kristof Meers [ctb],
Iven Van Mechelen [ths]
Maintainer: Aniek Sies <aniek.sies@kuleuven.be>
Diff between C443 versions 3.2.3 dated 2022-03-05 and 3.3 dated 2022-11-20
DESCRIPTION | 17 +-- MD5 | 10 - NAMESPACE | 4 R/clusterforest.R | 195 ++++++++++++++++++++++++++++++++---- R/treesourceClusterMethod.R | 5 man/clusterforest.Rd | 238 ++++++++++++++++++++++---------------------- 6 files changed, 318 insertions(+), 151 deletions(-)
Title: Compose Half-Half Plots Using Your Favourite Geoms
Description: A 'ggplot2' extension for easy plotting of half-half geom combinations. Think half boxplot and half jitterplot, or half violinplot and half dotplot.
Author: Frederik Tiedemann [aut, cre]
Maintainer: Frederik Tiedemann <fj.tiedemann@googlemail.com>
Diff between gghalves versions 0.1.3 dated 2022-05-30 and 0.1.4 dated 2022-11-20
DESCRIPTION | 8 MD5 | 10 - NEWS.md | 4 R/geom_half_boxplot.R | 26 +- build/vignette.rds |binary inst/doc/gghalves.html | 444 ++++++++++++++++++++++++++++++++++++++----------- 6 files changed, 380 insertions(+), 112 deletions(-)
Title: Differential Risk Hotspots in a Linear Network
Description: Performs the identification of differential risk hotspots (Briz-Redon et al. 2019) <doi:10.1016/j.aap.2019.105278> along a linear network. Given a marked point pattern lying on the linear network, the method implemented uses a network-constrained version of kernel density estimation (McSwiggan et al. 2017) <doi:10.1111/sjos.12255> to approximate the probability of occurrence across space for the type of event specified by the user through the marks of the pattern (Kelsall and Diggle 1995) <doi:10.2307/3318678>. The goal is to detect microzones of the linear network where the type of event indicated by the user is overrepresented.
Author: Alvaro Briz-Redon
Maintainer: Alvaro Briz-Redon <alvaro.briz@uv.es>
Diff between DRHotNet versions 2.0 dated 2021-07-01 and 2.1 dated 2022-11-20
DESCRIPTION | 10 +++++----- MD5 | 36 ++++++++++++++++++------------------ NAMESPACE | 1 - R/AuxiliaryFunctions.R | 8 ++++---- R/ImportPackages.R | 1 - R/NeighbourhoodMatrixNetwork.R | 1 - R/drhot.R | 1 - R/drsens.R | 1 - R/drsummary.R | 1 - R/plothot.R | 3 +-- R/plotrelp.R | 1 - R/relpnet.R | 1 - man/NeighbourhoodMatrixNetwork.Rd | 1 - man/drhot.Rd | 1 - man/drsens.Rd | 1 - man/drsummary.Rd | 1 - man/plothot.Rd | 3 +-- man/plotrelp.Rd | 1 - man/relpnet.Rd | 1 - 19 files changed, 29 insertions(+), 45 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-11-15 0.1.0
2020-07-15 0.0.9
2020-07-14 0.0.8
Title: Interlinear Glossed Linguistic Examples and Abbreviation Lists
Generation
Description: Helps to render interlinear glossed linguistic examples in html
'rmarkdown' documents and then semi-automatically compiles the list of
glosses at the end of the document. It also provides a database of linguistic
glosses.
Author: George Moroz [aut, cre]
Maintainer: George Moroz <agricolamz@gmail.com>
Diff between lingglosses versions 0.0.4 dated 2022-05-27 and 0.0.5 dated 2022-11-20
DESCRIPTION | 10 +++++----- MD5 | 22 +++++++++++----------- NAMESPACE | 2 ++ NEWS.md | 8 ++++++++ R/convert_to_df.R | 14 +++++++------- R/gloss_example.R | 36 +++++++++++++++++++++++++++++++----- R/glosses_df.R | 2 +- R/make_gloss_list.R | 3 +++ R/zzz.r | 1 + data/glosses_df.RData |binary man/gloss_example.Rd | 2 +- man/glosses_df.Rd | 2 +- 12 files changed, 71 insertions(+), 31 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-15 0.3.5