Title: Base Class and Methods for 'gson' Format
Description: Proposes a new file format ('gson') for storing gene set and related information, and provides read, write and other utilities to process this file format.
Author: Guangchuang Yu [aut, cre, cph]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between gson versions 0.0.9 dated 2022-09-06 and 0.1.0 dated 2023-03-06
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NEWS.md | 5 +++++ R/GMT.R | 7 +++++-- R/IO.R | 31 +++++++++++++++++++++++++------ 5 files changed, 43 insertions(+), 16 deletions(-)
Title: Discrete Matrix/Tensor Decomposition
Description: Semi-Binary and Semi-Ternary Matrix Decomposition are performed based on Non-negative Matrix Factorization (NMF) and Singular Value Decomposition (SVD). For the details of the methods, see the reference section of GitHub README.md <https://github.com/rikenbit/dcTensor>.
Author: Koki Tsuyuzaki [aut, cre]
Maintainer: Koki Tsuyuzaki <k.t.the-answer@hotmail.co.jp>
Diff between dcTensor versions 0.99.1 dated 2023-02-21 and 1.0.0 dated 2023-03-06
dcTensor-0.99.1/dcTensor/R/dGDSVD.R |only dcTensor-0.99.1/dcTensor/man/dGDSVD.Rd |only dcTensor-0.99.1/dcTensor/tests/testthat/test_dGDSVD.R |only dcTensor-1.0.0/dcTensor/DESCRIPTION | 8 dcTensor-1.0.0/dcTensor/MD5 | 79 ++- dcTensor-1.0.0/dcTensor/NAMESPACE | 20 dcTensor-1.0.0/dcTensor/R/dNTD.R |only dcTensor-1.0.0/dcTensor/R/dNTF.R |only dcTensor-1.0.0/dcTensor/R/dPLS.R |only dcTensor-1.0.0/dcTensor/R/dSVD.R |only dcTensor-1.0.0/dcTensor/R/dcTensor-internal.R | 108 ++++- dcTensor-1.0.0/dcTensor/R/djNMF.R |only dcTensor-1.0.0/dcTensor/R/dsiNMF.R |only dcTensor-1.0.0/dcTensor/R/toyModel.R | 131 ++++-- dcTensor-1.0.0/dcTensor/build/partial.rdb |binary dcTensor-1.0.0/dcTensor/build/vignette.rds |binary dcTensor-1.0.0/dcTensor/inst/NEWS | 11 dcTensor-1.0.0/dcTensor/inst/doc/dNMF.R | 25 - dcTensor-1.0.0/dcTensor/inst/doc/dNMF.Rmd | 61 +- dcTensor-1.0.0/dcTensor/inst/doc/dNMF.html | 367 ++++++++--------- dcTensor-1.0.0/dcTensor/inst/doc/dNTD.R |only dcTensor-1.0.0/dcTensor/inst/doc/dNTD.Rmd |only dcTensor-1.0.0/dcTensor/inst/doc/dNTD.html |only dcTensor-1.0.0/dcTensor/inst/doc/dNTF.R |only dcTensor-1.0.0/dcTensor/inst/doc/dNTF.Rmd |only dcTensor-1.0.0/dcTensor/inst/doc/dNTF.html |only dcTensor-1.0.0/dcTensor/inst/doc/dPLS.R |only dcTensor-1.0.0/dcTensor/inst/doc/dPLS.Rmd |only dcTensor-1.0.0/dcTensor/inst/doc/dPLS.html |only dcTensor-1.0.0/dcTensor/inst/doc/dSVD.R |only dcTensor-1.0.0/dcTensor/inst/doc/dSVD.Rmd |only dcTensor-1.0.0/dcTensor/inst/doc/dSVD.html |only dcTensor-1.0.0/dcTensor/inst/doc/djNMF.R |only dcTensor-1.0.0/dcTensor/inst/doc/djNMF.Rmd |only dcTensor-1.0.0/dcTensor/inst/doc/djNMF.html |only dcTensor-1.0.0/dcTensor/inst/doc/dsiNMF.R |only dcTensor-1.0.0/dcTensor/inst/doc/dsiNMF.Rmd |only dcTensor-1.0.0/dcTensor/inst/doc/dsiNMF.html |only dcTensor-1.0.0/dcTensor/man/dNMF.Rd | 2 dcTensor-1.0.0/dcTensor/man/dNTD.Rd |only dcTensor-1.0.0/dcTensor/man/dNTF.Rd |only dcTensor-1.0.0/dcTensor/man/dPLS.Rd |only dcTensor-1.0.0/dcTensor/man/dSVD.Rd |only dcTensor-1.0.0/dcTensor/man/dcTensor-package.Rd | 2 dcTensor-1.0.0/dcTensor/man/djNMF.Rd |only dcTensor-1.0.0/dcTensor/man/dsiNMF.Rd |only dcTensor-1.0.0/dcTensor/man/toyModel.Rd | 16 dcTensor-1.0.0/dcTensor/tests/testthat.R | 7 dcTensor-1.0.0/dcTensor/tests/testthat/test_dNTD.R |only dcTensor-1.0.0/dcTensor/tests/testthat/test_dNTF.R |only dcTensor-1.0.0/dcTensor/tests/testthat/test_dPLS.R |only dcTensor-1.0.0/dcTensor/tests/testthat/test_dSVD.R |only dcTensor-1.0.0/dcTensor/tests/testthat/test_djNMF.R |only dcTensor-1.0.0/dcTensor/tests/testthat/test_dsiNMF.R |only dcTensor-1.0.0/dcTensor/tests/testthat/test_toyModel.R | 36 + dcTensor-1.0.0/dcTensor/vignettes/bibliography.bib | 70 +++ dcTensor-1.0.0/dcTensor/vignettes/dNMF.Rmd | 61 +- dcTensor-1.0.0/dcTensor/vignettes/dNTD.Rmd |only dcTensor-1.0.0/dcTensor/vignettes/dNTF.Rmd |only dcTensor-1.0.0/dcTensor/vignettes/dPLS.Rmd |only dcTensor-1.0.0/dcTensor/vignettes/dSVD.Rmd |only dcTensor-1.0.0/dcTensor/vignettes/djNMF.Rmd |only dcTensor-1.0.0/dcTensor/vignettes/dsiNMF.Rmd |only 63 files changed, 653 insertions(+), 351 deletions(-)
Title: Covariance Regression with Random Forests
Description: Covariance Regression with Random Forests ('CovRegRF') is a
random forest method for estimating the covariance matrix of a
multivariate response given a set of covariates. Random forest trees
are built with a new splitting rule which is designed to maximize the
distance between the sample covariance matrix estimates of the child
nodes. The method is described in Alakus et al. (2022)
<arXiv:2209.08173>. 'CovRegRF' uses 'randomForestSRC' package
(Ishwaran and Kogalur, 2022)
<https://cran.r-project.org/package=randomForestSRC> by freezing at the
version 3.1.0. The custom splitting rule feature is utilised to apply the
proposed splitting rule.
Author: Cansu Alakus [aut, cre],
Denis Larocque [aut],
Aurelie Labbe [aut],
Hemant Ishwaran [ctb] ,
Udaya B. Kogalur [ctb]
Maintainer: Cansu Alakus <cansu.alakus@hec.ca>
Diff between CovRegRF versions 1.0.1 dated 2022-09-22 and 1.0.3 dated 2023-03-06
CovRegRF-1.0.1/CovRegRF/tests/testthat/test-significance.R |only CovRegRF-1.0.3/CovRegRF/DESCRIPTION | 6 CovRegRF-1.0.3/CovRegRF/MD5 | 26 +- CovRegRF-1.0.3/CovRegRF/NEWS.md |only CovRegRF-1.0.3/CovRegRF/R/significance.test.R | 19 - CovRegRF-1.0.3/CovRegRF/configure | 18 - CovRegRF-1.0.3/CovRegRF/configure.ac | 2 CovRegRF-1.0.3/CovRegRF/inst/doc/CovRegRF.html | 125 ++++------ CovRegRF-1.0.3/CovRegRF/inst/include/lapacke.h | 2 CovRegRF-1.0.3/CovRegRF/inst/include/lapacke/lapacke_nancheck.h | 2 CovRegRF-1.0.3/CovRegRF/man/significance.test.Rd | 20 - CovRegRF-1.0.3/CovRegRF/src/randomForestSRC.c | 58 ++-- CovRegRF-1.0.3/CovRegRF/src/randomForestSRC.h | 58 ++-- CovRegRF-1.0.3/CovRegRF/src/splitCustom.c | 2 CovRegRF-1.0.3/CovRegRF/src/splitCustom.h | 2 15 files changed, 150 insertions(+), 190 deletions(-)
Title: 'Base Dos Dados' R Client
Description: An R interface to the 'Base dos Dados' API <https:basedosdados.github.io/mais/py_reference_api/>). Authenticate your project, query our tables, save data to disk and memory, all from R.
Author: Pedro Cavalcante [aut, cre],
Daniel Herszenhut [aut] ,
Rodrigo Dornelles [aut]
Maintainer: Pedro Cavalcante <pedrocolrj@gmail.com>
Diff between basedosdados versions 0.2.1 dated 2022-03-15 and 0.2.2 dated 2023-03-06
DESCRIPTION | 41 - MD5 | 19 NAMESPACE | 13 R/bd_connection.R |only R/bdplyr.R | 1176 ++++++++++++++++++------------------ R/billing.R | 197 +++--- R/metadata.R | 18 R/zzzz.R | 105 +-- README.md |only man/BaseDosDadosConnection-class.Rd |only man/dataset_search.Rd |only man/get_dataset_description.Rd | 2 man/get_table_columns.Rd |only 13 files changed, 806 insertions(+), 765 deletions(-)
Title: R Interface to Apache Spark
Description: R interface to Apache Spark, a fast and general
engine for big data processing, see <https://spark.apache.org/>. This
package supports connecting to local and remote Apache Spark clusters,
provides a 'dplyr' compatible back-end, and provides an interface to
Spark's built-in machine learning algorithms.
Author: Javier Luraschi [aut],
Kevin Kuo [aut] ,
Kevin Ushey [aut],
JJ Allaire [aut],
Samuel Macedo [ctb],
Hossein Falaki [aut],
Lu Wang [aut],
Andy Zhang [aut],
Yitao Li [aut] ,
Jozef Hajnala [ctb],
Maciej Szymkiewicz [ctb] ,
Wil Davis [ctb],
Edgar Ruiz [au [...truncated...]
Maintainer: Edgar Ruiz <edgar@rstudio.com>
Diff between sparklyr versions 1.7.9 dated 2022-12-08 and 1.8.0 dated 2023-03-06
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NEWS.md | 12 ++++++++++++ R/dplyr_sql.R | 2 +- R/tidyr_nest.R | 11 ++++++++--- R/worker_apply.R | 4 ---- build/partial.rdb |binary inst/extdata/versions.json | 20 ++++++++++++++++---- java/embedded_sources.R | 4 ---- 9 files changed, 49 insertions(+), 28 deletions(-)
Title: Maximum Homogeneity Clustering for Univariate Data
Description: Maximum homogeneity clustering algorithm for one-dimensional data
described in W. D. Fisher (1958) <doi:10.1080/01621459.1958.10501479>
via dynamic programming.
Author: Nan Xiao [aut, cre]
Maintainer: Nan Xiao <me@nanx.me>
Diff between oneclust versions 0.2.2 dated 2022-08-15 and 0.2.3 dated 2023-03-06
DESCRIPTION | 8 ++++---- MD5 | 22 +++++++++++----------- NEWS.md | 8 ++++++++ R/cud.R | 8 ++++---- R/oneclust.R | 17 ++++++++++------- R/sim.R | 22 +++++++++++----------- build/vignette.rds |binary inst/doc/oneclust.html | 14 ++++---------- man/cud.Rd | 8 ++++---- man/oneclust.Rd | 17 ++++++++++------- man/sim_postcode_levels.Rd | 6 +++--- man/sim_postcode_samples.Rd | 12 ++++++------ 12 files changed, 75 insertions(+), 67 deletions(-)
Title: Clinical Trial Design and Data Analysis Functions
Description: Utilities to make your clinical collaborations easier if not
fun. It contains functions for designing studies such as Simon
2-stage and group sequential designs and for data analysis such
as Jonckheere-Terpstra test and estimating survival quantiles.
Author: Venkatraman E. Seshan [aut, cre],
Karissa Whiting [aut]
Maintainer: Venkatraman E. Seshan <seshanv@mskcc.org>
Diff between clinfun versions 1.1.0 dated 2022-02-22 and 1.1.1 dated 2023-03-06
DESCRIPTION | 8 +++--- MD5 | 17 ++++++------- NEWS.md | 19 +++++++++++--- R/coxphCPE.R | 70 ++++++++++++++++++++++++++++++++++++------------------ R/coxphERR.R | 2 - R/coxphQuantile.R | 2 - R/gsdesign.R | 2 - man/coxphCPE.Rd | 19 ++++++++++---- src/coxphCPEt.f |only src/init.c | 2 + 10 files changed, 94 insertions(+), 47 deletions(-)
Title: Likelihood Ratio Test-Based Approaches to Pharmacovigilance
Description: A suite of likelihood ratio test based methods to use in pharmacovigilance. Contains various testing and post-processing functions.
Author: Saptarshi Chakraborty [aut, cre],
Marianthi Markatou [aut],
Anran Liu [ctb]
Maintainer: Saptarshi Chakraborty <chakra.saptarshi@gmail.com>
Diff between pvLRT versions 0.5 dated 2023-01-21 and 0.5.1 dated 2023-03-06
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/pvlrt-main-function.R | 2 +- 3 files changed, 7 insertions(+), 7 deletions(-)
Title: A Collection of Functions for Graphing Correlation Matrices
Description: Routines for the graphical representation of correlation matrices by means of correlograms, MDS maps and biplots obtained by PCA, PFA or WALS (weighted alternating least squares); See Graffelman & De Leeuw (2023) <doi: 10.1080/00031305.2023.2186952>.
Author: Jan Graffelman [aut, cre],
Jan De Leeuw [aut]
Maintainer: Jan Graffelman <jan.graffelman@upc.edu>
Diff between Correlplot versions 1.0.4 dated 2022-09-21 and 1.0.8 dated 2023-03-06
Correlplot-1.0.4/Correlplot/inst/doc/Correlplot.Rnw |only Correlplot-1.0.4/Correlplot/vignettes/Correlplot-018.pdf |only Correlplot-1.0.4/Correlplot/vignettes/Correlplot-019.pdf |only Correlplot-1.0.4/Correlplot/vignettes/Correlplot-021.pdf |only Correlplot-1.0.4/Correlplot/vignettes/Correlplot-022.pdf |only Correlplot-1.0.4/Correlplot/vignettes/Correlplot.Rnw |only Correlplot-1.0.4/Correlplot/vignettes/DeltaPlot.pdf |only Correlplot-1.0.8/Correlplot/DESCRIPTION | 21 - Correlplot-1.0.8/Correlplot/MD5 | 56 ++- Correlplot-1.0.8/Correlplot/NAMESPACE | 4 Correlplot-1.0.8/Correlplot/R/FitRwithPCAandWALS.R |only Correlplot-1.0.8/Correlplot/R/Keller.R |only Correlplot-1.0.8/Correlplot/R/correlogram.R | 4 Correlplot-1.0.8/Correlplot/R/eig.R |only Correlplot-1.0.8/Correlplot/R/gfunc.R |only Correlplot-1.0.8/Correlplot/R/lfunc.R |only Correlplot-1.0.8/Correlplot/R/mbound.R |only Correlplot-1.0.8/Correlplot/R/pfa.R | 34 + Correlplot-1.0.8/Correlplot/R/rmse.R | 43 +- Correlplot-1.0.8/Correlplot/R/rmsePCAandWALS.R |only Correlplot-1.0.8/Correlplot/R/sfunc.R |only Correlplot-1.0.8/Correlplot/R/tr.R |only Correlplot-1.0.8/Correlplot/R/wAddPCA.R |only Correlplot-1.0.8/Correlplot/R/wAll.R |only Correlplot-1.0.8/Correlplot/R/wCol.R |only Correlplot-1.0.8/Correlplot/R/wNul.R |only Correlplot-1.0.8/Correlplot/R/wOne.R |only Correlplot-1.0.8/Correlplot/R/wPCA.R |only Correlplot-1.0.8/Correlplot/R/wRow.R |only Correlplot-1.0.8/Correlplot/build/partial.rdb |only Correlplot-1.0.8/Correlplot/build/vignette.rds |binary Correlplot-1.0.8/Correlplot/data/aircraft.rda |only Correlplot-1.0.8/Correlplot/inst/doc/Correlplot.R | 256 ++++++--------- Correlplot-1.0.8/Correlplot/inst/doc/Correlplot.Rmd |only Correlplot-1.0.8/Correlplot/inst/doc/Correlplot.pdf |binary Correlplot-1.0.8/Correlplot/man/FitRwithPCAandWALS.Rd |only Correlplot-1.0.8/Correlplot/man/Keller.Rd |only Correlplot-1.0.8/Correlplot/man/aircraft.Rd |only Correlplot-1.0.8/Correlplot/man/ipSymLS.Rd | 7 Correlplot-1.0.8/Correlplot/man/rmse.Rd | 18 - Correlplot-1.0.8/Correlplot/man/rmsePCAandWALS.Rd |only Correlplot-1.0.8/Correlplot/man/tr.Rd |only Correlplot-1.0.8/Correlplot/man/wAddPCA.Rd |only Correlplot-1.0.8/Correlplot/vignettes/Correlplot.Rmd |only Correlplot-1.0.8/Correlplot/vignettes/Correlplot.bib | 56 ++- Correlplot-1.0.8/Correlplot/vignettes/Correlplot.html |only 46 files changed, 269 insertions(+), 230 deletions(-)
Title: Authoring Books and Technical Documents with R Markdown
Description: Output formats and utilities for authoring books and technical documents with R Markdown.
Author: Yihui Xie [aut, cre] ,
JJ Allaire [ctb],
Albert Kim [ctb],
Alessandro Samuel-Rosa [ctb],
Andrzej Oles [ctb],
Atsushi Yasumoto [ctb] ,
Aust Frederik [ctb] ,
Bastiaan Quast [ctb],
Ben Marwick [ctb],
Chester Ismay [ctb],
Christophe Dervieux [ctb],
Clift [...truncated...]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between bookdown versions 0.32 dated 2023-01-17 and 0.33 dated 2023-03-06
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- R/gitbook.R | 2 +- inst/CITATION | 21 +++++++-------------- tests/testthat/helper-bs4_book.R | 11 ++++------- tests/testthat/helper.R | 4 ++++ tests/testthat/test-bs4_book.R | 4 ++-- tests/testthat/test-gitbook.R | 17 +++++++++++++++++ tests/testthat/test-skeleton.R | 4 ++-- 9 files changed, 48 insertions(+), 37 deletions(-)
Title: Utility Functions and Development Tools for the Admiral Package
Family
Description: Utility functions to check data, variables and conditions for functions used in
'admiral' and 'admiral' extension packages. Additional utility helper functions to assist developers
with maintaining documentation, testing and general upkeep of 'admiral' and 'admiral' extension packages.
Author: Ben Straub [aut, cre],
Stefan Bundfuss [aut],
Thomas Neitmann [aut],
Samia Kabi [aut],
Pooja Kumari [aut],
Syed Mubasheer [aut],
Ross Farrugia [aut],
Sadchla Mascary [aut],
Zelos Zhu [aut],
Jeffrey Dickinson [aut],
Ania Golab [aut],
Ondrej Slama [ctb [...truncated...]
Maintainer: Ben Straub <ben.x.straub@gsk.com>
Diff between admiraldev versions 0.2.0 dated 2022-11-30 and 0.3.0 dated 2023-03-06
admiraldev-0.2.0/admiraldev/man/as_name.Rd |only admiraldev-0.3.0/admiraldev/DESCRIPTION | 17 admiraldev-0.3.0/admiraldev/MD5 | 174 +-- admiraldev-0.3.0/admiraldev/NAMESPACE | 24 admiraldev-0.3.0/admiraldev/NEWS.md | 43 admiraldev-0.3.0/admiraldev/R/admiraldev-package.R | 23 admiraldev-0.3.0/admiraldev/R/assertions.R | 263 ++--- admiraldev-0.3.0/admiraldev/R/dataset_vignette.R | 54 - admiraldev-0.3.0/admiraldev/R/datasets.R | 1 admiraldev-0.3.0/admiraldev/R/dev_utilities.R | 82 - admiraldev-0.3.0/admiraldev/R/expect_dfs_equal.R | 1 admiraldev-0.3.0/admiraldev/R/get.R | 35 admiraldev-0.3.0/admiraldev/R/global.R | 3 admiraldev-0.3.0/admiraldev/R/is.R | 16 admiraldev-0.3.0/admiraldev/R/process_set_values_to.R |only admiraldev-0.3.0/admiraldev/R/quo.R | 168 ++- admiraldev-0.3.0/admiraldev/R/quote.R | 23 admiraldev-0.3.0/admiraldev/R/warnings.R | 19 admiraldev-0.3.0/admiraldev/R/what.R | 1 admiraldev-0.3.0/admiraldev/README.md | 29 admiraldev-0.3.0/admiraldev/inst/WORDLIST | 96 + admiraldev-0.3.0/admiraldev/inst/doc/admiraldev.Rmd | 2 admiraldev-0.3.0/admiraldev/inst/doc/admiraldev.html | 2 admiraldev-0.3.0/admiraldev/inst/www |only admiraldev-0.3.0/admiraldev/man/add_suffix_to_vars.Rd | 20 admiraldev-0.3.0/admiraldev/man/admiraldev-package.Rd | 2 admiraldev-0.3.0/admiraldev/man/arg_name.Rd | 4 admiraldev-0.3.0/admiraldev/man/assert_atomic_vector.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_character_scalar.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_character_vector.Rd | 14 admiraldev-0.3.0/admiraldev/man/assert_data_frame.Rd | 8 admiraldev-0.3.0/admiraldev/man/assert_date_var.Rd | 7 admiraldev-0.3.0/admiraldev/man/assert_date_vector.Rd | 5 admiraldev-0.3.0/admiraldev/man/assert_filter_cond.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_function.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_has_variables.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_integer_scalar.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_list_element.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_list_of.Rd | 25 admiraldev-0.3.0/admiraldev/man/assert_logical_scalar.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_numeric_vector.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_one_to_one.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_order_vars.Rd | 13 admiraldev-0.3.0/admiraldev/man/assert_param_does_not_exist.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_s3_class.Rd | 5 admiraldev-0.3.0/admiraldev/man/assert_same_type.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_symbol.Rd | 7 admiraldev-0.3.0/admiraldev/man/assert_unit.Rd | 3 admiraldev-0.3.0/admiraldev/man/assert_vars.Rd | 27 admiraldev-0.3.0/admiraldev/man/assert_varval_list.Rd | 12 admiraldev-0.3.0/admiraldev/man/backquote.Rd | 3 admiraldev-0.3.0/admiraldev/man/contains_vars.Rd | 11 admiraldev-0.3.0/admiraldev/man/convert_dtm_to_dtc.Rd | 4 admiraldev-0.3.0/admiraldev/man/dquote.Rd | 3 admiraldev-0.3.0/admiraldev/man/enumerate.Rd | 20 admiraldev-0.3.0/admiraldev/man/expect_dfs_equal.Rd | 3 admiraldev-0.3.0/admiraldev/man/expr_c.Rd |only admiraldev-0.3.0/admiraldev/man/extract_vars.Rd | 10 admiraldev-0.3.0/admiraldev/man/figures/lifecycle-deprecated.svg |only admiraldev-0.3.0/admiraldev/man/filter_if.Rd | 6 admiraldev-0.3.0/admiraldev/man/get_dataset.Rd | 3 admiraldev-0.3.0/admiraldev/man/get_source_vars.Rd | 15 admiraldev-0.3.0/admiraldev/man/grapes-notin-grapes.Rd | 4 admiraldev-0.3.0/admiraldev/man/grapes-or-grapes.Rd | 1 admiraldev-0.3.0/admiraldev/man/is_auto.Rd | 7 admiraldev-0.3.0/admiraldev/man/is_order_vars.Rd | 2 admiraldev-0.3.0/admiraldev/man/process_set_values_to.Rd |only admiraldev-0.3.0/admiraldev/man/quo_c.Rd | 10 admiraldev-0.3.0/admiraldev/man/quo_not_missing.Rd | 5 admiraldev-0.3.0/admiraldev/man/replace_symbol_in_expr.Rd |only admiraldev-0.3.0/admiraldev/man/replace_symbol_in_quo.Rd | 18 admiraldev-0.3.0/admiraldev/man/replace_values_by_names.Rd | 17 admiraldev-0.3.0/admiraldev/man/squote.Rd | 3 admiraldev-0.3.0/admiraldev/man/suppress_warning.Rd | 6 admiraldev-0.3.0/admiraldev/man/valid_time_units.Rd | 1 admiraldev-0.3.0/admiraldev/man/vars2chr.Rd | 17 admiraldev-0.3.0/admiraldev/man/warn_if_inconsistent_list.Rd | 12 admiraldev-0.3.0/admiraldev/man/warn_if_invalid_dtc.Rd | 3 admiraldev-0.3.0/admiraldev/man/warn_if_vars_exist.Rd | 3 admiraldev-0.3.0/admiraldev/man/what_is_it.Rd | 3 admiraldev-0.3.0/admiraldev/tests/testthat.R | 8 admiraldev-0.3.0/admiraldev/tests/testthat/test-assertions.R | 499 ++++++---- admiraldev-0.3.0/admiraldev/tests/testthat/test-compat_friendly_type.R | 2 admiraldev-0.3.0/admiraldev/tests/testthat/test-dataset_vignette.R | 10 admiraldev-0.3.0/admiraldev/tests/testthat/test-dev_utilities.R | 34 admiraldev-0.3.0/admiraldev/tests/testthat/test-get.R | 35 admiraldev-0.3.0/admiraldev/tests/testthat/test-is.R | 2 admiraldev-0.3.0/admiraldev/tests/testthat/test-process_set_values_to.R |only admiraldev-0.3.0/admiraldev/tests/testthat/test-quo.R | 137 +- admiraldev-0.3.0/admiraldev/tests/testthat/test-quote.R | 1 admiraldev-0.3.0/admiraldev/tests/testthat/test-warnings.R | 38 admiraldev-0.3.0/admiraldev/vignettes/admiraldev.Rmd | 2 92 files changed, 1257 insertions(+), 965 deletions(-)
Title: Harrell Miscellaneous
Description: Contains many functions useful for data
analysis, high-level graphics, utility operations, functions for
computing sample size and power, simulation, importing and annotating datasets,
imputing missing values, advanced table making, variable clustering,
character string manipulation, conversion of R objects to LaTeX and html code,
recoding variables, caching, simplified parallel computing, general moving window statistical estimation, and assistance in interpreting principal component analysis.
Author: Frank E Harrell Jr [aut, cre] ,
Charles Dupont [ctb]
Maintainer: Frank E Harrell Jr <fh@fharrell.com>
Diff between Hmisc versions 4.8-0 dated 2023-02-09 and 5.0-0 dated 2023-03-06
DESCRIPTION | 17 +++++++------ MD5 | 63 ++++++++++++++++++++++++++++++++++++++------------ NAMESPACE | 9 ++++--- NEWS | 23 ++++++++++++++++++ R/Misc.s | 38 +++++++++++++++++++++++++++--- R/abd.r |only R/addggLayers.r |only R/combine.levels.r |only R/cut2.s | 10 +++---- R/ebpcomp.r |only R/fImport.r |only R/hashCheck.r |only R/hlab.r |only R/latestFile.r |only R/meltData.r |only R/misc.get.s | 42 +++++++++++++++------------------ R/movStats.r |only R/nCoincident.r |only R/princmp.r |only R/runParallel.r |only R/seqFreq.r |only R/varclus.s | 22 ----------------- man/Misc.Rd | 8 +++++- man/addggLayers.Rd |only man/combine.levels.Rd |only man/contents.Rd | 3 +- man/csv.get.Rd | 12 ++++++--- man/cut2.Rd | 2 - man/ebpcomp.Rd |only man/extractlabs.Rd |only man/fImport.Rd |only man/getabd.Rd |only man/hashCheck.Rd |only man/hidingTOC.Rd | 3 -- man/hlab.Rd |only man/hlabs.Rd |only man/label.Rd | 3 +- man/latestFile.Rd |only man/meltData.Rd |only man/movStats.Rd |only man/nCoincident.Rd |only man/princmp.Rd |only man/runParallel.Rd |only man/runifChanged.Rd |only man/seqFreq.Rd |only man/spikecomp.Rd |only man/transcan.Rd | 4 +++ man/varclus.Rd | 28 +++------------------- man/vlab.Rd |only 49 files changed, 175 insertions(+), 112 deletions(-)
Title: Canadian Hydrological Analyses
Description: A collection of user-submitted functions to aid in the analysis of hydrological data, particularly for users in Canada. The functions focus on the use of Canadian data sets, and are suited to Canadian hydrology, such as the important cold region hydrological processes and will work with Canadian hydrological models. The functions are grouped into several themes, currently including Statistical hydrology, Basic data manipulations, Visualization, and Spatial hydrology. Functions developed by the Floodnet project are also included. CSHShydRology has been developed with the assistance of the Canadian Society for Hydrological Sciences (CSHS) which is an affiliated society of the Canadian Water Resources Association (CWRA). As of version 1.2.6, functions now fail gracefully when attempting to download data from a url which is unavailable.
Author: Kevin Shook [cre, aut],
Paul Whitfield [aut],
Robert Chlumsky [aut],
Daniel Moore [aut],
Martin Durocher [aut],
Matthew Lemieux [ctb],
Jason Chiang [ctb],
Joel Trubilowicz [ctb],
SJ Kim [ctb]
Maintainer: Kevin Shook <kevin.shook@usask.ca>
Diff between CSHShydRology versions 1.3.0 dated 2022-11-16 and 1.4.0 dated 2023-03-06
DESCRIPTION | 13 +++++++------ MD5 | 18 ++++++++++++++---- NAMESPACE | 9 +++++++++ R/ch_color_gradient.R |only R/ch_get_map_base.R |only R/ch_map_plot_data.R |only R/ch_tr_sign.R |only R/ch_tr_signif.R |only inst/doc/hydrograph_plot.html | 27 +++++++++++++++++---------- man/ch_color_gradient.Rd |only man/ch_get_map_base.Rd |only man/ch_map_plot_data.Rd |only man/ch_tr_sign.Rd |only man/ch_tr_signif.Rd |only tests/testthat/test_ch_rfa_extractamax.R | 3 ++- 15 files changed, 49 insertions(+), 21 deletions(-)
Title: 1d Water Level Interpolation along the Rivers Elbe and Rhine
Description: An S4 class and several functions which utilize internally stored
datasets and gauging data enable 1d water level interpolation. The S4 class
(WaterLevelDataFrame) structures the computation and visualisation
of 1d water level information along the German federal waterways Elbe and
Rhine. 'hyd1d' delivers 1d water level data - extracted from the 'FLYS'
database - and validated gauging data - extracted from the hydrological
database 'HyDaBa' - package-internally. For computations near real time
gauging data are queried externally from the 'PEGELONLINE REST API'
<https://pegelonline.wsv.de/webservice/dokuRestapi>.
Author: Arnd Weber [aut, cre] ,
Marcus Hatz [aut],
Wolfgang Stuermer [ctb],
Wilfried Wiechmann [ctb]
Maintainer: Arnd Weber <arnd.weber@bafg.de>
Diff between hyd1d versions 0.4.3 dated 2023-02-27 and 0.4.4 dated 2023-03-06
DESCRIPTION | 8 ++++---- MD5 | 20 ++++++++++---------- NEWS.md | 5 +++++ R/data.R | 6 +++--- R/getPegelonlineW.R | 9 +++++++-- build/partial.rdb |binary inst/CITATION | 2 +- inst/REFERENCES.bib | 2 +- inst/doc/hyd1d.html | 34 +++++++++++++++++----------------- inst/doc/vignette_DE.html | 32 ++++++++++++++++---------------- man/df.gauging_data.Rd | 4 ++-- 11 files changed, 66 insertions(+), 56 deletions(-)
Title: Fuzzy Similarity in Species Distributions
Description: Functions to compute fuzzy versions of species occurrence patterns based on presence-absence data (including inverse distance interpolation, trend surface analysis, and prevalence-independent favourability obtained from probability of presence), as well as pair-wise fuzzy similarity (based on fuzzy logic versions of commonly used similarity indices) among those occurrence patterns. Includes also functions for model consensus and comparison (overlap and fuzzy similarity, loss or gain), and for data preparation, such as obtaining unique abbreviations of species names, cleaning and gridding (thinning) point occurrence data onto raster maps, selecting absences under specified criteria, converting species lists (long format) to presence-absence tables (wide format), transposing part of a data frame, selecting relevant variables for models, assessing the false discovery rate, or analysing and dealing with multicollinearity. Initially described in Barbosa (2015) <doi:10.1111/2041-210X.1237 [...truncated...]
Author: Barbosa A.M.
Maintainer: A. Marcia Barbosa <ana.marcia.barbosa@gmail.com>
Diff between fuzzySim versions 4.9.2 dated 2022-10-30 and 4.9.8 dated 2023-03-06
DESCRIPTION | 17 ++++--- MD5 | 50 +++++++++++---------- NAMESPACE | 7 ++- NEWS | 107 +++++++++++++++++++++++++++++++++++++++++++++++ R/cleanCoords.R |only R/corSelect.R | 44 +++++++++++-------- R/entropy.R | 26 ++++++----- R/fuzzyRangeChange.R | 32 ++++++++------ R/gridRecords.R | 25 ++++++++-- R/modelTrim.R | 17 +++---- R/multGLM.R | 17 +++---- R/pairwiseRangemaps.R | 51 ++++++++++++++-------- R/selectAbsences.R |only R/stepwise.R | 50 +++++++++++---------- R/summaryWald.R | 7 +-- data/rotif.env.rda |binary data/rotifers.rda |binary inst/CITATION | 25 ++++------ man/Fav.Rd | 10 +--- man/cleanCoords.Rd |only man/corSelect.Rd | 8 +-- man/entropy.Rd | 11 ++-- man/fuzzyRangeChange.Rd | 56 +++++++++--------------- man/fuzzySim-package.Rd | 6 +- man/gridRecords.Rd | 36 +++++++++------ man/pairwiseRangemaps.Rd | 12 ++--- man/selectAbsences.Rd |only man/vulnerability.Rd | 2 28 files changed, 388 insertions(+), 228 deletions(-)
Title: Clinical Trial Registry History
Description: Retrieves historical versions of clinical trial registry
entries from <https://ClinicalTrials.gov>. Package functionality
and implementation is documented in Carlisle (2022)
<DOI:10.1371/journal.pone.0270909>.
Author: Benjamin Gregory Carlisle [aut, cre]
Maintainer: Benjamin Gregory Carlisle <murph@bgcarlisle.com>
Diff between cthist versions 1.4.0 dated 2022-12-16 and 1.4.1 dated 2023-03-06
cthist-1.4.0/cthist/R/polite-scrape.R |only cthist-1.4.1/cthist/DESCRIPTION | 12 +- cthist-1.4.1/cthist/MD5 | 57 ++++------ cthist-1.4.1/cthist/NEWS.md | 12 +- cthist-1.4.1/cthist/R/clinicaltrials_gov_dates.R | 16 -- cthist-1.4.1/cthist/R/clinicaltrials_gov_download.R | 12 -- cthist-1.4.1/cthist/R/clinicaltrials_gov_version.R | 17 -- cthist-1.4.1/cthist/build/partial.rdb |binary cthist-1.4.1/cthist/man/clinicaltrials_gov_dates.Rd | 6 - cthist-1.4.1/cthist/man/clinicaltrials_gov_download.Rd | 11 - cthist-1.4.1/cthist/man/clinicaltrials_gov_version.Rd | 6 - cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_contacts.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_criteria.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_enrol.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_gender.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_max_age.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_min_age.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_om_data.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_ostatus.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_pcdate.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_pcdate_precision.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_pcdatetype.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_references.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_results_posted.R | 4 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_sex.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_sponsor_data.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_startdate.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_startdate_precision.R | 2 cthist-1.4.1/cthist/tests/testthat/test-clinicaltrials_gov_version_volunteers.R | 2 30 files changed, 77 insertions(+), 112 deletions(-)
Title: Test Data for the 'admiral' Package
Description: A set of Study Data Tabulation Model (SDTM) datasets from the Clinical
Data Interchange Standards Consortium (CDISC) pilot project used for testing
and developing Analysis Data Model (ADaM) derivations inside the 'admiral'
package.
Author: Thomas Neitmann [aut, cre],
Stefan Bundfuss [aut],
Gordon Miller [aut],
Ben Straub [aut],
Syed Mubasheer [aut],
Ross Farrugia [ctb],
Shan Lee [ctb],
Gopi Vegesna [ctb],
Sophie Shapcott [ctb],
Mahdi About [ctb],
Antonio Rodriguez [ctb],
Claudia Carluc [...truncated...]
Maintainer: Thomas Neitmann <thomas.neitmann@roche.com>
Diff between admiral.test versions 0.4.0 dated 2022-11-29 and 0.5.0 dated 2023-03-06
DESCRIPTION | 14 +++++++++++--- MD5 | 42 +++++++++++++++++++++++++----------------- NEWS.md | 26 +++++++++++++++++++++++--- R/data.R | 32 ++++++++++++++++++++++++++++++-- README.md | 29 ++++++++++++++++++++--------- data/admiral_ae.rda |binary data/admiral_oe.rda |only data/admiral_qs.rda |binary data/admiral_rs.rda |binary data/admiral_sc.rda |only data/admiral_supptr.rda |binary data/admiral_tr.rda |binary data/admiral_tu.rda |binary data/raw_ae.rda |only data/raw_qs.rda |only inst/WORDLIST | 9 ++++++--- man/admiral.test-package.Rd | 4 ++++ man/admiral_ae.Rd | 8 ++++---- man/admiral_oe.Rd |only man/admiral_qs.Rd | 6 +++--- man/admiral_rs.Rd | 2 +- man/admiral_sc.Rd |only man/admiral_supptr.Rd | 2 +- man/admiral_tr.Rd | 2 +- man/raw_ae.Rd |only man/raw_qs.Rd |only 26 files changed, 129 insertions(+), 47 deletions(-)
Title: Split Plot
Description: Automates common plotting tasks to ease data exploration.
Makes density plots (potentially overlaid on histograms),
scatter plots with prediction lines, or bar or line plots with error bars.
For each type, y, or x and y variables can be plotted at levels of other variables,
all with minimal specification.
Author: Micah Iserman
Maintainer: Micah Iserman <micah.iserman@gmail.com>
Diff between splot versions 0.5.2 dated 2022-01-30 and 0.5.3 dated 2023-03-06
splot-0.5.2/splot/R/utils.R |only splot-0.5.3/splot/DESCRIPTION | 11 splot-0.5.3/splot/MD5 | 30 splot-0.5.3/splot/NAMESPACE | 3 splot-0.5.3/splot/NEWS.md | 13 splot-0.5.3/splot/R/splot.R | 2848 +++++++++++++++------------ splot-0.5.3/splot/R/splot.bench.R |only splot-0.5.3/splot/R/splot.color.R |only splot-0.5.3/splot/R/splot.colorcontrast.R |only splot-0.5.3/splot/R/splot.colormean.R |only splot-0.5.3/splot/README.md | 17 splot-0.5.3/splot/man/splot.Rd | 79 splot-0.5.3/splot/man/splot.bench.Rd | 81 splot-0.5.3/splot/man/splot.color.Rd | 28 splot-0.5.3/splot/man/splot.colorcontrast.Rd |only splot-0.5.3/splot/man/splot.colormean.Rd | 15 splot-0.5.3/splot/tests |only 17 files changed, 1756 insertions(+), 1369 deletions(-)
Title: Functional Data Analysis using Splines and Orthogonal Spline
Bases
Description: Splines are efficiently represented through their Taylor expansion at the knots. The representation accounts for the support sets and is thus suitable for sparse functional data. Two cases of boundary conditions are considered: zero-boundary or periodic-boundary for all derivatives except the last. The periodical splines are represented graphically using polar coordinates. The B-splines and orthogonal bases of splines that reside on small total support are implemented. The orthogonal bases are referred to as 'splinets' and are utilized for functional data analysis. Random spline generator is implemented as well as all fundamental algebraic and calculus operations on splines. The optimal, in the least square sense, functional fit by 'splinets' to data consisting of sampled values of functions as well as splines build over another set of knots is obtained and used for functional data analysis. <arXiv:2102.00733>, <doi:10.1016/j.cam.2022.114444>, <arXiv:2302.07552>.
Author: Xijia Liu [aut],
Hiba Nassar [aut],
Krzysztof Podgorski [aut, cre, cph]
Maintainer: Krzysztof Podgorski <Krzysztof.Podgorski@stat.lu.se>
Diff between Splinets versions 1.0.0 dated 2021-03-12 and 1.5.0 dated 2023-03-06
Splinets-1.0.0/Splinets/R/meth_is_spline_0ld.R |only Splinets-1.5.0/Splinets/DESCRIPTION | 34 Splinets-1.5.0/Splinets/MD5 | 83 +- Splinets-1.5.0/Splinets/R/AuxFun.R | 711 +++++++++++++++++-- Splinets-1.5.0/Splinets/R/Examples/ExDeriva.R | 2 Splinets-1.5.0/Splinets/R/Examples/ExIsSplinets.R | 14 Splinets-1.5.0/Splinets/R/Examples/ExPlot.R | 13 Splinets-1.5.0/Splinets/R/Examples/ExProject.R | 110 +- Splinets-1.5.0/Splinets/R/Examples/ExSplinet.R | 94 ++ Splinets-1.5.0/Splinets/R/Examples/ExTruckTire.R | 25 Splinets-1.5.0/Splinets/R/Examples/ExWind.R |only Splinets-1.5.0/Splinets/R/class_Splinets.R | 10 Splinets-1.5.0/Splinets/R/data_wind.R |only Splinets-1.5.0/Splinets/R/fun_evspline.R | 2 Splinets-1.5.0/Splinets/R/fun_lincomb.R | 2 Splinets-1.5.0/Splinets/R/fun_project.R | 294 ++++++- Splinets-1.5.0/Splinets/R/fun_splinet.R | 132 --- Splinets-1.5.0/Splinets/R/meth_is_spline.R | 145 +-- Splinets-1.5.0/Splinets/R/meth_lines.R | 2 Splinets-1.5.0/Splinets/R/meth_plot.R | 50 - Splinets-1.5.0/Splinets/data/wind.rda |only Splinets-1.5.0/Splinets/man/Splinets-class.Rd | 7 Splinets-1.5.0/Splinets/man/construct.Rd | 5 Splinets-1.5.0/Splinets/man/deriva.Rd | 7 Splinets-1.5.0/Splinets/man/dintegra.Rd | 5 Splinets-1.5.0/Splinets/man/evspline.Rd | 5 Splinets-1.5.0/Splinets/man/exsupp.Rd | 5 Splinets-1.5.0/Splinets/man/gather.Rd | 5 Splinets-1.5.0/Splinets/man/gramian.Rd | 5 Splinets-1.5.0/Splinets/man/integra.Rd | 5 Splinets-1.5.0/Splinets/man/is.splinets-methods.Rd | 27 Splinets-1.5.0/Splinets/man/is.splinets.Rd | 180 ---- Splinets-1.5.0/Splinets/man/lincomb.Rd | 7 Splinets-1.5.0/Splinets/man/lines-Splinets-method.Rd | 9 Splinets-1.5.0/Splinets/man/plot-Splinets-method.Rd | 38 - Splinets-1.5.0/Splinets/man/project.Rd | 132 ++- Splinets-1.5.0/Splinets/man/refine.Rd | 5 Splinets-1.5.0/Splinets/man/rspline.Rd | 5 Splinets-1.5.0/Splinets/man/seq2dyad.Rd | 5 Splinets-1.5.0/Splinets/man/splinet.Rd | 111 ++ Splinets-1.5.0/Splinets/man/subsample.Rd | 5 Splinets-1.5.0/Splinets/man/sym2one.Rd | 5 Splinets-1.5.0/Splinets/man/tire.Rd | 25 Splinets-1.5.0/Splinets/man/truck.Rd | 25 Splinets-1.5.0/Splinets/man/wind.Rd |only 45 files changed, 1630 insertions(+), 721 deletions(-)
Title: Soil and Chemical Substance Emission and Transport Model
Description: An enhanced version of the semi-empirical, spatially distributed
emission and transport model PhosFate implemented in 'R' and 'C++'. It
currently supports suspended solids (SS) and particulate phosphorus (PP). A
major feature is the allocation of substance loads entering surface waters
to their sources of origin, which is a basic requirement for the
identification of critical source areas and in consequence a cost-effective
implementation of mitigation measures. References: Hepp et al. (2022)
<doi:10.1016/j.jenvman.2022.114514>; Hepp and Zessner (2019)
<doi:10.3390/w11102161>; Kovacs (2013)
<http://hdl.handle.net/20.500.12708/9468>.
Author: Gerold Hepp [aut, cre]
Maintainer: Gerold Hepp <gisler@hepp.cc>
Diff between RPhosFate versions 1.0.2 dated 2022-09-21 and 1.0.3 dated 2023-03-06
DESCRIPTION | 18 ++-- MD5 | 34 +++---- NEWS.md | 59 +++++++------ R/RPhosFate.R | 2 R/input.R | 8 - R/interface.R | 8 - R/utils.R | 2 README.md | 2 build/vignette.rds |binary inst/CITATION | 45 +++++----- inst/doc/basicWorkflow.html | 115 ++++++++++++-------------- inst/tinytest/testProject/parameters.yaml | 2 inst/tinytest/testProject/testParameters.yaml | 2 man/DEMrelatedInput.Rd | 2 man/catchment.Rd | 8 - man/getLayer-RPhosFate-method.Rd | 4 src/Makevars | 2 src/Makevars.win | 2 18 files changed, 161 insertions(+), 154 deletions(-)
Title: Download and Measure Global Trends Through Google Search Volumes
Description: Google offers public access to global search volumes from its
search engine through the Google Trends portal. The package downloads
these search volumes provided by Google Trends and uses them to
measure and analyze the distribution of search scores across countries
or within countries. The package allows researchers and analysts to
use these search scores to investigate global trends based on patterns
within these scores. This offers insights such as degree of
internationalization of firms and organizations or dissemination of
political, social, or technological trends across the globe or within
single countries. An outline of the package's methodological
foundations and potential applications is available as a working
paper: <https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3969013>.
Author: Harald Puhr [aut, cre],
Jakob Muellner [ccp]
Maintainer: Harald Puhr <harald.puhr@gmail.com>
Diff between globaltrends versions 0.0.13 dated 2023-02-23 and 0.0.14 dated 2023-03-06
globaltrends-0.0.13/globaltrends/R/plot_map.r |only globaltrends-0.0.13/globaltrends/man/plot_map.Rd |only globaltrends-0.0.13/globaltrends/tests/testthat/test-plot_map.R |only globaltrends-0.0.14/globaltrends/DESCRIPTION | 17 - globaltrends-0.0.14/globaltrends/MD5 | 89 ++++------ globaltrends-0.0.14/globaltrends/NAMESPACE | 13 - globaltrends-0.0.14/globaltrends/NEWS.md | 44 +--- globaltrends-0.0.14/globaltrends/R/add_keywords.r | 37 ++-- globaltrends-0.0.14/globaltrends/R/add_locations.r | 14 + globaltrends-0.0.14/globaltrends/R/check_functions.r | 9 - globaltrends-0.0.14/globaltrends/R/compute_doi.r | 46 +++-- globaltrends-0.0.14/globaltrends/R/compute_score.r | 24 +- globaltrends-0.0.14/globaltrends/R/data.r | 13 + globaltrends-0.0.14/globaltrends/R/database_functions.r | 82 ++------- globaltrends-0.0.14/globaltrends/R/download_control.r | 22 +- globaltrends-0.0.14/globaltrends/R/download_object.r | 25 +- globaltrends-0.0.14/globaltrends/R/export_data.r | 9 - globaltrends-0.0.14/globaltrends/R/get_abnorm_hist.r | 9 - globaltrends-0.0.14/globaltrends/R/helper_functions.r | 2 globaltrends-0.0.14/globaltrends/R/plot_bar.r | 11 - globaltrends-0.0.14/globaltrends/R/plot_box.r | 39 ++-- globaltrends-0.0.14/globaltrends/R/plot_ts.r | 45 ++--- globaltrends-0.0.14/globaltrends/R/plot_voi_doi.r | 13 - globaltrends-0.0.14/globaltrends/R/remove_data.r | 45 ++--- globaltrends-0.0.14/globaltrends/inst/doc/globaltrends.R | 10 - globaltrends-0.0.14/globaltrends/inst/doc/globaltrends.Rmd | 11 - globaltrends-0.0.14/globaltrends/inst/doc/globaltrends.html | 58 ++---- globaltrends-0.0.14/globaltrends/man/add_keyword.Rd | 11 + globaltrends-0.0.14/globaltrends/man/add_locations.Rd | 5 globaltrends-0.0.14/globaltrends/man/add_synonym.Rd | 6 globaltrends-0.0.14/globaltrends/man/compute_doi.Rd | 16 - globaltrends-0.0.14/globaltrends/man/compute_score.Rd | 10 - globaltrends-0.0.14/globaltrends/man/download_control.Rd | 9 + globaltrends-0.0.14/globaltrends/man/download_object.Rd | 9 + globaltrends-0.0.14/globaltrends/man/export_data.Rd | 3 globaltrends-0.0.14/globaltrends/man/remove_data.Rd | 1 globaltrends-0.0.14/globaltrends/tests/testthat/test-24months.R | 12 - globaltrends-0.0.14/globaltrends/tests/testthat/test-abnorm.R | 8 globaltrends-0.0.14/globaltrends/tests/testthat/test-computations.R | 8 globaltrends-0.0.14/globaltrends/tests/testthat/test-export.R | 8 globaltrends-0.0.14/globaltrends/tests/testthat/test-locations.R | 4 globaltrends-0.0.14/globaltrends/tests/testthat/test-plot_bar.R | 2 globaltrends-0.0.14/globaltrends/tests/testthat/test-plot_box.R | 4 globaltrends-0.0.14/globaltrends/tests/testthat/test-plot_ts.R | 4 globaltrends-0.0.14/globaltrends/tests/testthat/test-plot_voi_doi.R | 4 globaltrends-0.0.14/globaltrends/tests/testthat/test-synonyms.R | 10 - globaltrends-0.0.14/globaltrends/vignettes/globaltrends.Rmd | 11 - 47 files changed, 416 insertions(+), 416 deletions(-)
Title: Geometries to Plot Networks with 'ggplot2'
Description: Geometries to plot network objects with 'ggplot2'.
Author: Francois Briatte [aut, cre] ,
Michal Bojanowski [ctb] ,
Mickael Canouil [ctb] ,
Zachary Charlop-Powers [ctb] ,
Jacob C. Fisher [ctb] ,
Kipp Johnson [ctb] ,
Tyler Rinker [ctb]
Maintainer: Francois Briatte <f.briatte@gmail.com>
Diff between ggnetwork versions 0.5.10 dated 2021-07-06 and 0.5.12 dated 2023-03-06
ggnetwork-0.5.10/ggnetwork/tests/testthat/testthat-problems.rds |only ggnetwork-0.5.12/ggnetwork/DESCRIPTION | 10 ggnetwork-0.5.12/ggnetwork/MD5 | 35 ggnetwork-0.5.12/ggnetwork/NEWS.md | 18 ggnetwork-0.5.12/ggnetwork/R/fortify-igraph.R | 2 ggnetwork-0.5.12/ggnetwork/R/fortify-network.R | 2 ggnetwork-0.5.12/ggnetwork/R/utilities.R | 6 ggnetwork-0.5.12/ggnetwork/build/vignette.rds |binary ggnetwork-0.5.12/ggnetwork/inst/doc/ggnetwork.html | 697 +++++++--- ggnetwork-0.5.12/ggnetwork/man/format_fortify.Rd | 6 ggnetwork-0.5.12/ggnetwork/man/fortify.igraph.Rd | 6 ggnetwork-0.5.12/ggnetwork/man/fortify.network.Rd | 6 ggnetwork-0.5.12/ggnetwork/man/geom_edges.Rd | 16 ggnetwork-0.5.12/ggnetwork/man/geom_edgetext.Rd | 14 ggnetwork-0.5.12/ggnetwork/man/geom_edgetext_repel.Rd | 6 ggnetwork-0.5.12/ggnetwork/man/geom_nodes.Rd | 14 ggnetwork-0.5.12/ggnetwork/man/geom_nodetext.Rd | 14 ggnetwork-0.5.12/ggnetwork/man/geom_nodetext_repel.Rd | 6 ggnetwork-0.5.12/ggnetwork/tests/testthat/test-ggnetwork.R | 4 19 files changed, 611 insertions(+), 251 deletions(-)
Title: Diagnostic Analysis Using Forward Search Procedure for Various
Models
Description: Identifies potential data outliers and their impact on estimates and analyses. Uses the forward search approach of Atkinson and Riani, "Robust Diagnostic Regression Analysis", 2000,<ISBN: o-387-95017-6> to prepare descriptive statistics of a dataset that is to be analyzed by stats::lm(), stats::glm(), or nlme::lme(). Includes graphics functions to display the descriptive statistics.
Author: William Fairweather [aut, cre]
Maintainer: William Fairweather <wrf343@flowervalleyconsulting.com>
Diff between forsearch versions 3.2.0 dated 2023-02-19 and 3.3.0 dated 2023-03-06
forsearch-3.2.0/forsearch/R/showmegl.R |only forsearch-3.2.0/forsearch/R/showmelme.R |only forsearch-3.2.0/forsearch/man/showmegl.rd |only forsearch-3.2.0/forsearch/man/showmelme.rd |only forsearch-3.3.0/forsearch/DESCRIPTION | 6 - forsearch-3.3.0/forsearch/MD5 | 16 +--- forsearch-3.3.0/forsearch/NAMESPACE | 2 forsearch-3.3.0/forsearch/NEWS.md | 11 ++ forsearch-3.3.0/forsearch/R/showme.R | 105 ++++++++++++++++++++++++---- forsearch-3.3.0/forsearch/build/partial.rdb |binary forsearch-3.3.0/forsearch/man/showme.rd | 6 - 11 files changed, 116 insertions(+), 30 deletions(-)
Title: Shoreline Dating Stone Age Sites on the Norwegian Skagerrak
Coast
Description: Provides tools for shoreline dating Stone Age sites located on the
Norwegian Skagerrak coast using methods presented in Roalkvam (2023)
<doi:10.1016/j.quascirev.2022.107880>. Shoreline dating is based on
the present-day elevation of a site, a reconstruction of past relative
sea-level change, and empirically derived estimates of the likely elevation of
the sites above the contemporaneous sea-level when they were in use. The
geographical and temporal coverage of the method thus follows from local
geological reconstructions of shoreline displacement and the degree to which
settlements in the region have been found to have been located on or close to
the shoreline when they were in use. Methods for numerical treatment and
visualisation of the dates are provided, along with basic tools for evaluating
the location of sites within the region and corresponding variation in local
shoreline displacement.
Author: Isak Roalkvam [aut, cre]
Maintainer: Isak Roalkvam <isakroa@protonmail.com>
Diff between shoredate versions 1.0.0 dated 2023-01-23 and 1.0.1 dated 2023-03-06
shoredate-1.0.0/shoredate/inst/precompiled_figures |only shoredate-1.0.0/shoredate/tests/testthat/_snaps/target_plot/greyscale-plot.svg |only shoredate-1.0.0/shoredate/tests/testthat/_snaps/target_plot/plot-with-a-target-point.svg |only shoredate-1.0.1/shoredate/DESCRIPTION | 23 - shoredate-1.0.1/shoredate/MD5 | 76 +-- shoredate-1.0.1/shoredate/NEWS.md | 6 shoredate-1.0.1/shoredate/R/check_target_location.R | 6 shoredate-1.0.1/shoredate/R/displacement_plot.R | 6 shoredate-1.0.1/shoredate/R/interpolate_curve.R | 8 shoredate-1.0.1/shoredate/R/print.R | 8 shoredate-1.0.1/shoredate/R/shoredate_hdr.R | 13 shoredate-1.0.1/shoredate/R/shoredate_plot.R | 2 shoredate-1.0.1/shoredate/R/shoredate_sumplot.R | 8 shoredate-1.0.1/shoredate/R/shoreline_date.R | 59 +- shoredate-1.0.1/shoredate/R/sum_shoredates.R | 23 - shoredate-1.0.1/shoredate/README.md | 51 +- shoredate-1.0.1/shoredate/inst/CITATION |only shoredate-1.0.1/shoredate/inst/doc/shoredate.Rmd | 27 - shoredate-1.0.1/shoredate/inst/doc/shoredate.html | 214 +++++----- shoredate-1.0.1/shoredate/man/check_target_location.Rd | 6 shoredate-1.0.1/shoredate/man/displacement_plot.Rd | 11 shoredate-1.0.1/shoredate/man/figures/coverage.png |binary shoredate-1.0.1/shoredate/man/figures/date-1.png |binary shoredate-1.0.1/shoredate/man/interpolate_curve.Rd | 8 shoredate-1.0.1/shoredate/man/print.shoreline_date.Rd | 14 shoredate-1.0.1/shoredate/man/shoredate_hdr.Rd | 19 shoredate-1.0.1/shoredate/man/shoredate_sumplot.Rd | 15 shoredate-1.0.1/shoredate/man/shoreline_date.Rd | 33 - shoredate-1.0.1/shoredate/tests/testthat/_snaps/shoredate_sumplot/plot-of-sum-of-multiple-dates.svg | 2 shoredate-1.0.1/shoredate/tests/testthat/_snaps/shoreline_date.md | 12 shoredate-1.0.1/shoredate/tests/testthat/test-shoreline_date.R | 11 shoredate-1.0.1/shoredate/tests/testthat/test-sum_shoredates.R | 16 shoredate-1.0.1/shoredate/tests/testthat/test-target_plot.R | 10 shoredate-1.0.1/shoredate/vignettes/shore-greyscale-1.png |binary shoredate-1.0.1/shoredate/vignettes/shore-multipoint-1.png |binary shoredate-1.0.1/shoredate/vignettes/shore-plot_example-1.png |binary shoredate-1.0.1/shoredate/vignettes/shore-plot_example_isobases-1.png |binary shoredate-1.0.1/shoredate/vignettes/shore-plot_example_isobases-2.png |binary shoredate-1.0.1/shoredate/vignettes/shore-sum_plot-1.png |binary shoredate-1.0.1/shoredate/vignettes/shoredate.Rmd | 27 - shoredate-1.0.1/shoredate/vignettes/shoredate.Rmd.orig | 28 - 41 files changed, 419 insertions(+), 323 deletions(-)
Title: Execute 'SQL' Scripts in 'R' Containing Multiple Queries
Description: The nature of working with structured query language ('SQL') scripts
efficiently often requires the creation of temporary tables and there
are few clean and simple 'R' 'SQL' execution approaches that allow
you to complete this kind of work with the 'R' environment. This
package seeks to give 'SQL' implementations in 'R' a little love
by deploying functions that allow you to deploy complex 'SQL'
scripts within a typical 'R' workflow.
Author: Kerns Sam [aut, cre]
Maintainer: Kerns Sam <samwkerns@gmail.com>
Diff between SQLove versions 0.0.1 dated 2023-02-16 and 0.0.2 dated 2023-03-06
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 4 ++++ R/dbGetMultiQuery.R | 2 ++ R/dbSendMultiUpdate.R | 2 ++ 5 files changed, 15 insertions(+), 7 deletions(-)
Title: Rapid Realistic Routing with 'R5'
Description: Rapid realistic routing on multimodal transport networks
(walk, bike, public transport and car) using 'R5', the Rapid Realistic
Routing on Real-world and Reimagined networks engine
<https://github.com/conveyal/r5>. The package allows users to generate
detailed routing analysis or calculate travel time matrices using
seamless parallel computing on top of the R5 Java machine. While R5
is developed by Conveyal, the package r5r is independently developed
by a team at the Institute for Applied Economic Research (Ipea) with
contributions from collaborators. Apart from the documentation in this
package, users will find additional information on R5 documentation at
<https://docs.conveyal.com/>. Although we try to keep new releases of
r5r in synchrony with R5, the development of R5 follows Conveyal's
independent update process. Hence, users should confirm the R5 version
implied by the Conveyal user manual (see
<https://docs.conveyal.com/changelog>) corresponds with the R5 ver [...truncated...]
Author: Marcus Saraiva [aut] ,
Rafael H. M. Pereira [aut, cre]
,
Daniel Herszenhut [aut] ,
Carlos Kaue Vieira Braga [aut]
,
Matthew Wigginton Conway [aut]
,
Ipea - Institute for Applied Economic Research [cph, fnd]
Maintainer: Rafael H. M. Pereira <rafa.pereira.br@gmail.com>
Diff between r5r versions 1.0.0 dated 2023-01-27 and 1.0.1 dated 2023-03-06
DESCRIPTION | 6 MD5 | 56 ++-- NEWS.md | 10 R/download_r5.R | 4 R/setup_r5.R | 2 build/partial.rdb |binary inst/CITATION | 30 -- inst/doc/calculating_accessibility.R | 168 ++++++------ inst/doc/calculating_accessibility.html | 26 - inst/doc/calculating_isochrones.R | 152 +++++------ inst/doc/calculating_isochrones.html | 14 - inst/doc/detailed_itineraries.R | 118 ++++---- inst/doc/detailed_itineraries.html | 33 -- inst/doc/fare_structure.R | 392 ++++++++++++++--------------- inst/doc/fare_structure.html | 175 +----------- inst/doc/pareto_frontier.R | 208 +++++++-------- inst/doc/pareto_frontier.Rmd | 2 inst/doc/pareto_frontier.html | 68 ++--- inst/doc/r5r.R | 196 +++++++------- inst/doc/r5r.html | 90 ------ inst/doc/time_window.R | 174 ++++++------ inst/doc/time_window.html | 68 ----- inst/doc/travel_time_matrix.R | 140 +++++----- inst/doc/travel_time_matrix.html | 102 ------- inst/extdata/metadata_r5r.csv | 1 man/download_r5.Rd | 4 tests/tests_rafa/isochrone.R | 432 +++++++++++++++----------------- tests/tests_rafa/test_rafa.R | 108 +++++++- vignettes/pareto_frontier.Rmd | 2 29 files changed, 1242 insertions(+), 1539 deletions(-)
Title: Tools for Eurostat Open Data
Description: Tools to download data from the Eurostat database
<https://ec.europa.eu/eurostat> together with search and manipulation
utilities.
Author: Leo Lahti [aut, cre] ,
Janne Huovari [aut],
Markus Kainu [aut],
Przemyslaw Biecek [aut],
Daniel Antal [ctb],
Diego Hernangomez [ctb] ,
Joona Lehtomaki [ctb],
Francois Briatte [ctb],
Reto Stauffer [ctb],
Paul Rougieux [ctb],
Anna Vasylytsya [ctb],
Oli [...truncated...]
Maintainer: Leo Lahti <leo.lahti@iki.fi>
Diff between eurostat versions 3.7.10 dated 2022-02-09 and 3.8.2 dated 2023-03-06
eurostat-3.7.10/eurostat/vignettes/vignette.md |only eurostat-3.8.2/eurostat/DESCRIPTION | 74 +-- eurostat-3.8.2/eurostat/MD5 | 103 ++-- eurostat-3.8.2/eurostat/NAMESPACE | 16 eurostat-3.8.2/eurostat/R/check_access_to_data.R | 2 eurostat-3.8.2/eurostat/R/data.R | 2 eurostat-3.8.2/eurostat/R/data_spatial.R | 90 +++ eurostat-3.8.2/eurostat/R/eurostat-package.R | 2 eurostat-3.8.2/eurostat/R/eurotime2date.R | 114 ++++ eurostat-3.8.2/eurostat/R/eurotime2num.R | 68 ++ eurostat-3.8.2/eurostat/R/get_bibentry.R | 22 eurostat-3.8.2/eurostat/R/get_eurostat.R | 240 ++++++--- eurostat-3.8.2/eurostat/R/get_eurostat_geospatial.R | 102 +++- eurostat-3.8.2/eurostat/R/get_eurostat_json.R | 146 ++++-- eurostat-3.8.2/eurostat/R/get_eurostat_raw.R | 29 - eurostat-3.8.2/eurostat/R/get_eurostat_raw2.R |only eurostat-3.8.2/eurostat/R/label_eurostat.R | 242 ++++++++++ eurostat-3.8.2/eurostat/R/tidy_eurostat.R | 9 eurostat-3.8.2/eurostat/R/tidy_eurostat2.R |only eurostat-3.8.2/eurostat/README.md | 87 +-- eurostat-3.8.2/eurostat/build/vignette.rds |binary eurostat-3.8.2/eurostat/data/ea_countries.rda |binary eurostat-3.8.2/eurostat/data/efta_countries.rda |binary eurostat-3.8.2/eurostat/data/eu_candidate_countries.rda |binary eurostat-3.8.2/eurostat/data/eu_countries.rda |binary eurostat-3.8.2/eurostat/data/eurostat_geodata_60_2016.rda |binary eurostat-3.8.2/eurostat/data/tgs00026.rda |binary eurostat-3.8.2/eurostat/inst/doc/vignette.html | 18 eurostat-3.8.2/eurostat/man/convert_time_col2.Rd |only eurostat-3.8.2/eurostat/man/cut_to_classes.Rd | 5 eurostat-3.8.2/eurostat/man/dic_order.Rd | 3 eurostat-3.8.2/eurostat/man/eu_countries.Rd | 6 eurostat-3.8.2/eurostat/man/eurostat-package.Rd | 10 eurostat-3.8.2/eurostat/man/eurostat_geodata_60_2016.Rd | 93 +++ eurostat-3.8.2/eurostat/man/eurotime2date.Rd | 9 eurostat-3.8.2/eurostat/man/eurotime2date2.Rd |only eurostat-3.8.2/eurostat/man/eurotime2num.Rd | 3 eurostat-3.8.2/eurostat/man/eurotime2num2.Rd |only eurostat-3.8.2/eurostat/man/get_bibentry.Rd | 20 eurostat-3.8.2/eurostat/man/get_eurostat.Rd | 74 +-- eurostat-3.8.2/eurostat/man/get_eurostat_dic.Rd | 6 eurostat-3.8.2/eurostat/man/get_eurostat_geospatial.Rd | 85 +++ eurostat-3.8.2/eurostat/man/get_eurostat_json.Rd | 74 ++- eurostat-3.8.2/eurostat/man/get_eurostat_raw.Rd | 6 eurostat-3.8.2/eurostat/man/get_eurostat_raw2.Rd |only eurostat-3.8.2/eurostat/man/get_eurostat_toc.Rd | 6 eurostat-3.8.2/eurostat/man/harmonize_country_code.Rd | 3 eurostat-3.8.2/eurostat/man/label_eurostat.Rd | 20 eurostat-3.8.2/eurostat/man/label_eurostat2.Rd |only eurostat-3.8.2/eurostat/man/search_eurostat.Rd | 10 eurostat-3.8.2/eurostat/man/tgs00026.Rd | 2 eurostat-3.8.2/eurostat/man/tidy_eurostat2.Rd |only eurostat-3.8.2/eurostat/tests/testthat/test_02_flags.R | 20 eurostat-3.8.2/eurostat/tests/testthat/test_03_get_eurostat_geospatial.R | 3 eurostat-3.8.2/eurostat/tests/testthat/test_04_get.R | 127 ++++- eurostat-3.8.2/eurostat/tests/testthat/test_05_json.R | 37 - eurostat-3.8.2/eurostat/tests/testthat/test_06_label.R | 3 57 files changed, 1496 insertions(+), 495 deletions(-)
Title: Represent Network Objects on a Map
Description: Represent 'network' or 'igraph' objects whose vertices can be represented by features in an 'sf' object as a network graph surmising a 'sf' plot. Fits into 'ggplot2' grammar.
Author: Matteo Dimai [aut, cre]
Maintainer: Matteo Dimai <matteo.dimai@phd.units.it>
Diff between netmap versions 0.1.1 dated 2022-03-18 and 0.1.2 dated 2023-03-06
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ R/ggnetmap.R | 4 +++- 4 files changed, 13 insertions(+), 7 deletions(-)
Title: Functions and Utilities for Jordan
Description: Provides core functions and utilities for packages and other code
developed by Jordan Mark Barbone.
Author: Jordan Mark Barbone [aut, cph, cre]
Maintainer: Jordan Mark Barbone <jmbarbone@gmail.com>
Diff between fuj versions 0.1.1 dated 2022-11-18 and 0.1.2 dated 2023-03-06
DESCRIPTION | 8 +-- LICENSE | 2 MD5 | 33 +++++++------- NAMESPACE | 1 NEWS.md | 7 +++ R/condition.R | 87 ++++++++++++++++++++++++++++++++++++--- R/list.R | 22 ++++++--- R/namespace.R | 15 +++--- README.md | 2 inst/WORDLIST | 3 - man/new_condition.Rd | 22 +++++++++ man/require_namespace.Rd | 4 - tests/testthat/test-colons.R | 4 - tests/testthat/test-condition.R |only tests/testthat/test-data-frame.R | 4 - tests/testthat/test-list.R | 3 + tests/testthat/test-muffle.R | 4 - tests/testthat/test-namespace.R | 24 +++++++++- 18 files changed, 190 insertions(+), 55 deletions(-)
Title: Analyses of Evolutionary Time-Series
Description: Facilitates univariate and multivariate analysis of evolutionary sequences of phenotypic change. The package extends the modeling framework available in the 'paleoTS' package. Please see <https://klvoje.github.io/evoTS/index.html> for information about the package and the implemented models.
Author: Kjetil Lysne Voje [aut, cre]
Maintainer: Kjetil Lysne Voje <k.l.voje@nhm.uio.no>
Diff between evoTS versions 1.0.1 dated 2023-02-07 and 1.0.2 dated 2023-03-06
DESCRIPTION | 6 +++--- MD5 | 26 +++++++++++++------------- NEWS.md | 10 +++++++--- R/logL.joint.accel.decel.single.R | 7 +++++-- R/logL.joint.accel.decel.single.R.zero.corr.R | 5 +++-- R/logL.joint.accel_decel.R | 2 +- R/opt.accel.single.R | 13 ++++++++----- R/opt.accel.single.R.zero.corr.R | 12 +++++++----- R/opt.decel.single.R | 14 ++++++++------ R/opt.decel.single.R.zero.corr.R | 12 +++++++----- R/opt.joint.decel.R | 2 +- R/opt.single.R | 3 +++ R/opt.single.R.zero.corr.R | 2 ++ README.md | 24 +++++++++++++++++++++++- 14 files changed, 91 insertions(+), 47 deletions(-)
Title: Paws Low-Level Amazon Web Services API
Description: Functions for making low-level API requests to Amazon Web Services
<https://aws.amazon.com>. The functions handle building, signing, and
sending requests, and receiving responses. They are designed to help build
higher-level interfaces to individual services, such as Simple Storage
Service (S3).
Author: David Kretch [aut],
Adam Banker [aut],
Dyfan Jones [cre],
Amazon.com, Inc. [cph]
Maintainer: Dyfan Jones <dyfan.r.jones@gmail.com>
Diff between paws.common versions 0.5.5 dated 2023-02-02 and 0.5.6 dated 2023-03-06
DESCRIPTION | 24 ++++++++++++------------ MD5 | 10 +++++----- NAMESPACE | 1 + NEWS.md | 4 ++++ R/credential_providers.R | 31 +++++++++++++++++++++++++++++-- R/logging.R | 3 ++- 6 files changed, 53 insertions(+), 20 deletions(-)
Title: Geographic Data Analysis and Modeling
Description: Reading, writing, manipulating, analyzing and modeling of spatial data. This package has been superseded by the "terra" package <https://CRAN.R-project.org/package=terra>.
Author: Robert J. Hijmans [cre, aut] ,
Jacob van Etten [ctb],
Michael Sumner [ctb],
Joe Cheng [ctb],
Dan Baston [ctb],
Andrew Bevan [ctb],
Roger Bivand [ctb],
Lorenzo Busetto [ctb],
Mort Canty [ctb],
Ben Fasoli [ctb],
David Forrest [ctb],
Aniruddha Ghosh [ct [...truncated...]
Maintainer: Robert J. Hijmans <r.hijmans@gmail.com>
Diff between raster versions 3.6-14 dated 2023-01-16 and 3.6-20 dated 2023-03-06
DESCRIPTION | 9 +-- MD5 | 40 +++++++------- NAMESPACE | 2 R/AAAClasses.R | 3 - R/AAgeneric_functions.R | 3 + R/brick.R | 34 +++++++++--- R/coerce.R | 61 +++++++-------------- R/hdrRaster.R | 6 -- R/progressBar.R | 21 ++++--- R/project.R | 13 +++- R/projectRaster.R | 85 +++++++----------------------- R/projection.R | 131 ++++++++++++++++++++++++++--------------------- R/raster.R | 34 +++++------- R/rasterFromASCII.R | 2 R/rasterFromGDAL.R | 6 +- R/rasterFromRasterFile.R | 25 +++----- R/srs.R | 24 ++++---- R/union_sp.R | 6 +- R/writeAllGDAL.R | 39 +++++++------ R/writeRaster.R | 20 +++++-- R/writeStartStopGDAL.R | 10 ++- 21 files changed, 287 insertions(+), 287 deletions(-)
Title: 'SAS' Linear Model
Description: This is a core implementation of 'SAS' procedures for linear models - GLM, REG, ANOVA, FREQ, and UNIVARIATE. Some R packages provide type II and type III SS. However, the results of nested and complex designs are often different from those of 'SAS.' Different results does not necessarily mean incorrectness. However, many wants the same results to SAS. This package aims to achieve that.
Reference: Littell RC, Stroup WW, Freund RJ (2002, ISBN:0-471-22174-0).
Author: Kyun-Seop Bae [aut]
Maintainer: Kyun-Seop Bae <k@acr.kr>
Diff between sasLM versions 0.9.5 dated 2023-02-05 and 0.9.6 dated 2023-03-06
sasLM-0.9.5/sasLM/inst/doc/Report-Different-Simplest2301290914.pdf |only sasLM-0.9.5/sasLM/inst/doc/Report-NOT-OKs2301290915.pdf |only sasLM-0.9.5/sasLM/inst/doc/Validation-Report-GLM-2301290915.pdf |only sasLM-0.9.6/sasLM/DESCRIPTION | 8 sasLM-0.9.6/sasLM/MD5 | 131 +++++----- sasLM-0.9.6/sasLM/R/EMS.R | 9 sasLM-0.9.6/sasLM/R/RanTest.R |only sasLM-0.9.6/sasLM/R/SLICE.R | 14 - sasLM-0.9.6/sasLM/R/T3MS.R | 3 sasLM-0.9.6/sasLM/R/T3test.R | 11 sasLM-0.9.6/sasLM/R/satt.R | 5 sasLM-0.9.6/sasLM/R/sysdata.rda |binary sasLM-0.9.6/sasLM/inst/NEWS.Rd | 33 +- sasLM-0.9.6/sasLM/inst/doc/Report-Different-Simplest2302091426.pdf |only sasLM-0.9.6/sasLM/inst/doc/Report-NOT-OKs2302091426.pdf |only sasLM-0.9.6/sasLM/inst/doc/Validation-Report-GLM-2302091427.pdf |only sasLM-0.9.6/sasLM/inst/doc/sasLM-manual.pdf |binary sasLM-0.9.6/sasLM/man/BEdata.Rd | 2 sasLM-0.9.6/sasLM/man/CIest.Rd | 2 sasLM-0.9.6/sasLM/man/CONTR.Rd | 2 sasLM-0.9.6/sasLM/man/Coll.Rd | 2 sasLM-0.9.6/sasLM/man/Cor.test.Rd | 2 sasLM-0.9.6/sasLM/man/Diffogram.Rd | 2 sasLM-0.9.6/sasLM/man/DoEdata.Rd |only sasLM-0.9.6/sasLM/man/EMS.Rd | 2 sasLM-0.9.6/sasLM/man/ESTM.Rd | 4 sasLM-0.9.6/sasLM/man/G2SWEEP.Rd | 4 sasLM-0.9.6/sasLM/man/GLM.Rd | 4 sasLM-0.9.6/sasLM/man/LSM.Rd | 2 sasLM-0.9.6/sasLM/man/ModelMatrix.Rd | 2 sasLM-0.9.6/sasLM/man/ORcmh.Rd | 4 sasLM-0.9.6/sasLM/man/ORinv.Rd | 8 sasLM-0.9.6/sasLM/man/ORmn.Rd | 8 sasLM-0.9.6/sasLM/man/ORmn1.Rd | 4 sasLM-0.9.6/sasLM/man/PDIFF.Rd | 6 sasLM-0.9.6/sasLM/man/QuartileRange.Rd | 2 sasLM-0.9.6/sasLM/man/RD.Rd | 2 sasLM-0.9.6/sasLM/man/RDinv.Rd | 8 sasLM-0.9.6/sasLM/man/RDmn.Rd | 12 sasLM-0.9.6/sasLM/man/RDmn1.Rd | 4 sasLM-0.9.6/sasLM/man/REG.Rd | 6 sasLM-0.9.6/sasLM/man/RR.Rd | 6 sasLM-0.9.6/sasLM/man/RRinv.Rd | 8 sasLM-0.9.6/sasLM/man/RRmn.Rd | 8 sasLM-0.9.6/sasLM/man/RRmn1.Rd | 6 sasLM-0.9.6/sasLM/man/RanTest.Rd |only sasLM-0.9.6/sasLM/man/Range.Rd | 2 sasLM-0.9.6/sasLM/man/SD.Rd | 2 sasLM-0.9.6/sasLM/man/SLICE.Rd | 6 sasLM-0.9.6/sasLM/man/T3MS.Rd | 2 sasLM-0.9.6/sasLM/man/UCL.Rd | 4 sasLM-0.9.6/sasLM/man/UNIV.Rd | 8 sasLM-0.9.6/sasLM/man/WhiteTest.Rd | 2 sasLM-0.9.6/sasLM/man/bk.Rd | 2 sasLM-0.9.6/sasLM/man/cSS.Rd | 2 sasLM-0.9.6/sasLM/man/corFisher.Rd | 6 sasLM-0.9.6/sasLM/man/e1.Rd | 2 sasLM-0.9.6/sasLM/man/est.Rd | 2 sasLM-0.9.6/sasLM/man/estmb.Rd | 2 sasLM-0.9.6/sasLM/man/is.cor.Rd | 6 sasLM-0.9.6/sasLM/man/lr0.Rd | 6 sasLM-0.9.6/sasLM/man/pB.Rd | 4 sasLM-0.9.6/sasLM/man/pD.Rd | 2 sasLM-0.9.6/sasLM/man/pResD.Rd | 4 sasLM-0.9.6/sasLM/man/regD.Rd | 4 sasLM-0.9.6/sasLM/man/sasLM-package.Rd | 2 sasLM-0.9.6/sasLM/man/trimmedMean.Rd | 2 sasLM-0.9.6/sasLM/man/tsum0.Rd | 2 sasLM-0.9.6/sasLM/man/tsum1.Rd | 4 sasLM-0.9.6/sasLM/man/tsum2.Rd | 8 sasLM-0.9.6/sasLM/man/tsum3.Rd | 10 71 files changed, 228 insertions(+), 204 deletions(-)
Title: Easily Connect to Common Types of Databases
Description: A unified interface for connecting to databases ('SQLite', 'MySQL', 'PostgreSQL').
Just provide the database name and the package will ask you questions
to help you configure the connection and setup your credentials. Once
database configuration and connection has been set up once, you won't
have to do it ever again.
Author: Sam El-Kamand [aut, cre, cph]
Maintainer: Sam El-Kamand <sam.elkamand@gmail.com>
Diff between easydb versions 1.0.0 dated 2022-09-29 and 1.1.0 dated 2023-03-06
easydb-1.0.0/easydb/inst/images/easydb.pptx |only easydb-1.1.0/easydb/DESCRIPTION | 8 easydb-1.1.0/easydb/MD5 | 18 easydb-1.1.0/easydb/NEWS.md |only easydb-1.1.0/easydb/R/easyDB.R | 1537 ++++++++++---------- easydb-1.1.0/easydb/README.md | 257 +-- easydb-1.1.0/easydb/build/vignette.rds |binary easydb-1.1.0/easydb/inst/doc/adding_db_support.R | 12 easydb-1.1.0/easydb/inst/doc/adding_db_support.Rmd | 66 easydb-1.1.0/easydb/inst/doc/adding_db_support.html | 596 +++---- easydb-1.1.0/easydb/vignettes/adding_db_support.Rmd | 66 11 files changed, 1287 insertions(+), 1273 deletions(-)
Title: Handling of Data from the Clinical Data Management System
'secuTrial'
Description: Seamless and standardized interaction with data
exported from the clinical data management system (CDMS)
'secuTrial'<https://www.secutrial.com>.
The primary data export the package works with is a standard non-rectangular export.
Author: Alan G. Haynes [cre, aut, cph],
Patrick R. Wright [aut, cph],
Milica Markovic [aut, cph],
Gilles Dutilh [ctb],
Armando Lenz [ctb],
Pascal Benkert [com],
Silvia Grieder [ctb],
Pia Neuschwander [ctb],
Constantin Sluka [ctb]
Maintainer: Alan G. Haynes <alan.haynes@ctu.unibe.ch>
Diff between secuTrialR versions 1.0.9 dated 2021-03-11 and 1.1.1 dated 2023-03-06
secuTrialR-1.0.9/secuTrialR/vignettes/secuTrialR-package-vignette.html |only secuTrialR-1.1.1/secuTrialR/DESCRIPTION | 25 secuTrialR-1.1.1/secuTrialR/LICENSE | 4 secuTrialR-1.1.1/secuTrialR/MD5 | 232 - secuTrialR-1.1.1/secuTrialR/NAMESPACE | 155 secuTrialR-1.1.1/secuTrialR/NEWS.md | 295 - secuTrialR-1.1.1/secuTrialR/R/annual_recruitment.R | 160 secuTrialR-1.1.1/secuTrialR/R/asdataframe.R | 139 secuTrialR-1.1.1/secuTrialR/R/assess_form_variable_completeness.R | 346 +- secuTrialR-1.1.1/secuTrialR/R/build_secuTrial_url.R | 204 - secuTrialR-1.1.1/secuTrialR/R/check_export_options.R | 153 secuTrialR-1.1.1/secuTrialR/R/completeness.R | 396 +- secuTrialR-1.1.1/secuTrialR/R/dates_secuTrial.R | 372 +- secuTrialR-1.1.1/secuTrialR/R/dictionary_secuTrial.R |only secuTrialR-1.1.1/secuTrialR/R/diff_secuTrial.R | 146 secuTrialR-1.1.1/secuTrialR/R/export_date.R |only secuTrialR-1.1.1/secuTrialR/R/factorize.R | 372 +- secuTrialR-1.1.1/secuTrialR/R/get.R | 76 secuTrialR-1.1.1/secuTrialR/R/id_conversions.R | 362 +- secuTrialR-1.1.1/secuTrialR/R/internals.R | 520 +-- secuTrialR-1.1.1/secuTrialR/R/labels_secuTrial.R | 386 +- secuTrialR-1.1.1/secuTrialR/R/links_secuTrial.R | 198 - secuTrialR-1.1.1/secuTrialR/R/plot_recruitment.R | 234 - secuTrialR-1.1.1/secuTrialR/R/read_export_options.R | 640 +-- secuTrialR-1.1.1/secuTrialR/R/read_export_table.R | 282 - secuTrialR-1.1.1/secuTrialR/R/read_secuTrial.R | 158 secuTrialR-1.1.1/secuTrialR/R/read_secuTrial_raw.R | 311 - secuTrialR-1.1.1/secuTrialR/R/read_validation_overview.R | 88 secuTrialR-1.1.1/secuTrialR/R/return_hidden_items.R | 76 secuTrialR-1.1.1/secuTrialR/R/return_random_participants.R | 214 - secuTrialR-1.1.1/secuTrialR/R/return_scores.R | 66 secuTrialR-1.1.1/secuTrialR/R/subset.R | 250 - secuTrialR-1.1.1/secuTrialR/R/visit_structure.R | 182 - secuTrialR-1.1.1/secuTrialR/R/write_secuTrial.R | 122 secuTrialR-1.1.1/secuTrialR/README.md | 1251 +++---- secuTrialR-1.1.1/secuTrialR/build/vignette.rds |binary secuTrialR-1.1.1/secuTrialR/inst/CITATION | 24 secuTrialR-1.1.1/secuTrialR/inst/COPYRIGHTS | 6 secuTrialR-1.1.1/secuTrialR/inst/doc/secuTrialR-package-vignette.R | 608 +-- secuTrialR-1.1.1/secuTrialR/inst/doc/secuTrialR-package-vignette.Rmd | 1728 +++++----- secuTrialR-1.1.1/secuTrialR/inst/doc/secuTrialR-package-vignette.pdf |binary secuTrialR-1.1.1/secuTrialR/inst/extdata/README_extdata.md | 28 secuTrialR-1.1.1/secuTrialR/inst/extdata/dictionaries/dict_export_options_keys.csv | 14 secuTrialR-1.1.1/secuTrialR/inst/extdata/dictionaries/dict_export_options_settings.csv | 14 secuTrialR-1.1.1/secuTrialR/inst/extdata/dictionaries/dict_form_status_mnpfcs.csv | 14 secuTrialR-1.1.1/secuTrialR/inst/extdata/dictionaries/dict_items_table.csv | 14 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/calcium_secuTrial.csv | 1010 ++--- secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/ExportOptions.html | 1538 ++++---- secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/atbmd.xls | 2 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/atcn.xls | 2 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/atcvp.xls | 2 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/bmd.xls | 1010 ++--- secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/cn.xls | 228 - secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/ctr.xls | 4 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/cts.xls | 2 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/fs.xls | 4 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/is.xls | 8 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/qac.xls | 2 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/qs.xls | 4 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/vp.xls | 4 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/BMD/s_export_CSV-xls_BMD_short_en_utf8/vpfs.xls | 4 secuTrialR-1.1.1/secuTrialR/inst/extdata/sT_exports/README_sT_exports.md | 58 secuTrialR-1.1.1/secuTrialR/man/annual_recruitment.Rd | 80 secuTrialR-1.1.1/secuTrialR/man/as.data.frame.secuTrialdata.Rd | 137 secuTrialR-1.1.1/secuTrialR/man/assess_form_variable_completeness.Rd | 162 secuTrialR-1.1.1/secuTrialR/man/build_secuTrial_url.Rd | 182 - secuTrialR-1.1.1/secuTrialR/man/check_export_options.Rd | 80 secuTrialR-1.1.1/secuTrialR/man/dates_secuTrial.Rd | 86 secuTrialR-1.1.1/secuTrialR/man/dictionary_secuTrial.Rd |only secuTrialR-1.1.1/secuTrialR/man/diff_secuTrial.Rd | 90 secuTrialR-1.1.1/secuTrialR/man/export_date.Rd |only secuTrialR-1.1.1/secuTrialR/man/factorize.Rd | 76 secuTrialR-1.1.1/secuTrialR/man/form_status_counts.Rd | 72 secuTrialR-1.1.1/secuTrialR/man/form_status_summary.Rd | 72 secuTrialR-1.1.1/secuTrialR/man/get_participants.Rd | 60 secuTrialR-1.1.1/secuTrialR/man/labels_secuTrial.Rd | 194 - secuTrialR-1.1.1/secuTrialR/man/links_secuTrial.Rd | 128 secuTrialR-1.1.1/secuTrialR/man/plot_recruitment.Rd | 102 secuTrialR-1.1.1/secuTrialR/man/read_secuTrial.Rd | 70 secuTrialR-1.1.1/secuTrialR/man/read_validation_overview.Rd | 64 secuTrialR-1.1.1/secuTrialR/man/return_hidden_items.Rd | 62 secuTrialR-1.1.1/secuTrialR/man/return_random_participants.Rd | 106 secuTrialR-1.1.1/secuTrialR/man/return_scores.Rd | 64 secuTrialR-1.1.1/secuTrialR/man/secuTrialdata.Rd | 94 secuTrialR-1.1.1/secuTrialR/man/subset_secuTrial.Rd | 122 secuTrialR-1.1.1/secuTrialR/man/visit_structure.Rd | 82 secuTrialR-1.1.1/secuTrialR/man/write_secuTrial.Rd | 112 secuTrialR-1.1.1/secuTrialR/tests/testthat.R | 8 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-annual_recruitment.R | 148 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-asdataframe.R | 148 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-assess_form_variable_completeness.R | 186 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-build_secuTrial_url.R | 72 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-completeness.R | 340 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-dates_secutrial.R | 460 +- secuTrialR-1.1.1/secuTrialR/tests/testthat/test-dictionary.R |only secuTrialR-1.1.1/secuTrialR/tests/testthat/test-diff_secuTrial.R | 144 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-encoding.R | 192 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-export_options_warnings.R | 50 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-factorize_secutrial.R | 264 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-get.R | 60 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-id_conversion.R | 164 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-internal_functions.R | 408 +- secuTrialR-1.1.1/secuTrialR/tests/testthat/test-labels_secutrial.R | 242 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-links_secuTrial.R | 78 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-plot_recruitment.R | 200 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-printmethod_secutrial.R | 70 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-read_export_options.R | 378 +- secuTrialR-1.1.1/secuTrialR/tests/testthat/test-read_export_options_languages.R | 348 +- secuTrialR-1.1.1/secuTrialR/tests/testthat/test-read_export_table.R | 272 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-read_secuTrial.R | 156 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-read_secuTrial_raw.R | 258 - secuTrialR-1.1.1/secuTrialR/tests/testthat/test-read_validation_overview.R | 36 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-return_hidden_items.R | 54 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-return_random_participants.R | 108 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-return_scores.R | 38 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-subset.R | 356 +- secuTrialR-1.1.1/secuTrialR/tests/testthat/test-version_diff.R | 56 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-visit_structure.R | 153 secuTrialR-1.1.1/secuTrialR/tests/testthat/test-write_secuTrial.R | 192 - secuTrialR-1.1.1/secuTrialR/vignettes/secuTrialR-package-vignette.Rmd | 1728 +++++----- 120 files changed, 12299 insertions(+), 12112 deletions(-)
Title: Import XY-Data into R
Description: Provides access to the 'xylib' C library for to import xy
data from powder diffraction, spectroscopy and other experimental methods.
Author: Sebastian Kreutzer [aut, trl, cre]
,
Johannes Friedrich [aut] ,
RLum Team [ctb],
Marcin Wojdyr [cph] ,
Peng Zhang [cph]
Maintainer: Sebastian Kreutzer <sebastian.kreutzer@uni-heidelberg.de>
Diff between rxylib versions 0.2.9 dated 2023-01-06 and 0.2.11 dated 2023-03-06
rxylib-0.2.11/rxylib/DESCRIPTION | 17 ++++----- rxylib-0.2.11/rxylib/MD5 | 32 ++++++++--------- rxylib-0.2.11/rxylib/NEWS.md | 7 ++- rxylib-0.2.11/rxylib/R/methods_rxylib.R | 4 +- rxylib-0.2.11/rxylib/R/read_xyData.R | 27 +++++++++----- rxylib-0.2.11/rxylib/R/rxylib-package.R |only rxylib-0.2.11/rxylib/README.md | 3 - rxylib-0.2.11/rxylib/man/convert_xy2TKA.Rd | 2 - rxylib-0.2.11/rxylib/man/read_xyData.Rd | 5 +- rxylib-0.2.11/rxylib/man/rxylib-package.Rd | 2 - rxylib-0.2.11/rxylib/src/Makevars | 17 +++++++-- rxylib-0.2.11/rxylib/src/get_meta_DataSet.cpp | 10 ++--- rxylib-0.2.11/rxylib/src/read_data.cpp | 2 - rxylib-0.2.11/rxylib/src/xylib/pdcif.cpp | 1 rxylib-0.2.11/rxylib/src/xylib/riet7.cpp | 5 ++ rxylib-0.2.11/rxylib/src/xylib/specsxy.cpp | 3 + rxylib-0.2.11/rxylib/tests/testthat/test_read_xyData.R | 6 ++- rxylib-0.2.9/rxylib/R/rxylib.R |only 18 files changed, 88 insertions(+), 55 deletions(-)
Title: Preparing, Checking, and Submitting Articles to the 'R Journal'
Description: Create an 'R Journal' 'Rmarkdown' template article, that will
generate html and pdf versions of your paper. Check that the paper folder
has all the required components needed for submission.
Examples of 'R Journal' publications can be found at
<https://journal.r-project.org>.
Author: Mitchell O'Hara-Wild [aut],
Stephanie Kobakian [aut],
H. Sherry Zhang [aut],
Di Cook [aut, cre] ,
Simon Urbanek [aut],
Christophe Dervieux [aut]
Maintainer: Di Cook <dicook@monash.edu>
Diff between rjtools versions 1.0.9 dated 2022-11-14 and 1.0.10 dated 2023-03-06
rjtools-1.0.10/rjtools/DESCRIPTION | 14 rjtools-1.0.10/rjtools/MD5 | 48 - rjtools-1.0.10/rjtools/NAMESPACE | 4 rjtools-1.0.10/rjtools/NEWS.md | 16 rjtools-1.0.10/rjtools/R/check.R | 574 +++++++++++------- rjtools-1.0.10/rjtools/R/rj_pdf_issue.R | 20 rjtools-1.0.10/rjtools/R/rj_web_article.R | 18 rjtools-1.0.10/rjtools/inst/doc/article_template.html | 14 rjtools-1.0.10/rjtools/inst/doc/check_functions.html | 130 +--- rjtools-1.0.10/rjtools/inst/doc/create_article.html | 111 +-- rjtools-1.0.10/rjtools/inst/doc/format-details.Rmd | 36 - rjtools-1.0.10/rjtools/inst/doc/format-details.html | 159 ++-- rjtools-1.0.10/rjtools/inst/rjdistill.html | 4 rjtools-1.0.10/rjtools/inst/sample-article/article.R |only rjtools-1.0.10/rjtools/man/checks.Rd | 48 + rjtools-1.0.10/rjtools/man/log_error.Rd | 100 ++- rjtools-1.0.10/rjtools/man/rjtools-package.Rd | 1 rjtools-1.0.10/rjtools/tests/bad-article |only rjtools-1.0.10/rjtools/tests/testthat/test-check.R | 61 + rjtools-1.0.10/rjtools/vignettes/figures/penguins.pdf |only rjtools-1.0.10/rjtools/vignettes/figures/penguins.svg |only rjtools-1.0.10/rjtools/vignettes/format-details.Rmd | 36 - rjtools-1.0.9/rjtools/man/log_note.Rd |only rjtools-1.0.9/rjtools/man/log_success.Rd |only 24 files changed, 894 insertions(+), 500 deletions(-)
Title: Multiblock Data Fusion in Statistics and Machine Learning
Description: Functions and datasets to support Smilde, Næs and Liland (2021, ISBN: 978-1-119-60096-1)
"Multiblock Data Fusion in Statistics and Machine Learning - Applications in the Natural and Life Sciences".
This implements and imports a large collection of methods for multiblock data analysis with common interfaces, result- and plotting
functions, several real data sets and six vignettes covering a range different applications.
Author: Kristian Hovde Liland [aut, cre]
,
Solve Saeboe [ctb],
Stefan Schrunner [rev]
Maintainer: Kristian Hovde Liland <kristian.liland@nmbu.no>
Diff between multiblock versions 0.8.4 dated 2023-02-20 and 0.8.5 dated 2023-03-06
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS | 4 ++++ R/supervised.R | 10 ++++++---- R/utilities.R | 7 +++++-- inst/doc/vignette_E_supervised.html | 4 ++-- 6 files changed, 26 insertions(+), 17 deletions(-)
Title: Simplify 'ggplot2' Visualisation
Description: Simplify 'ggplot2' visualisation with 'ggblanket' wrapper functions.
Author: David Hodge [aut, cre] ,
Nik Mitchell [ctb] ,
Rosie Percival [ctb]
Maintainer: David Hodge <davidhodge931@gmail.com>
Diff between ggblanket versions 1.6.3 dated 2023-02-01 and 1.7.0 dated 2023-03-06
DESCRIPTION | 19 + MD5 | 158 +++++++------- NEWS.md | 11 + R/gg_area.R | 272 +++++++++++++++++-------- R/gg_bar.R | 272 ++++++++++++++++++------- R/gg_bin2d.R | 265 +++++++++++++++++-------- R/gg_blank.R | 255 ++++++++++++++++-------- R/gg_boxplot.R | 281 ++++++++++++++++++-------- R/gg_col.R | 275 ++++++++++++++++++------- R/gg_crossbar.R | 279 ++++++++++++++++++-------- R/gg_density.R | 274 ++++++++++++++++++------- R/gg_errorbar.R | 292 ++++++++++++++++++--------- R/gg_freqpoly.R | 273 ++++++++++++++++++------- R/gg_function.R | 265 +++++++++++++++++-------- R/gg_hex.R | 268 +++++++++++++++++-------- R/gg_histogram.R | 275 ++++++++++++++++++------- R/gg_jitter.R | 273 ++++++++++++++++++------- R/gg_label.R | 274 ++++++++++++++++++------- R/gg_line.R | 273 +++++++++++++++++-------- R/gg_linerange.R | 278 ++++++++++++++++++-------- R/gg_path.R | 269 ++++++++++++++++++------- R/gg_point.R | 276 ++++++++++++++++++-------- R/gg_pointrange.R | 281 ++++++++++++++++++-------- R/gg_polygon.R | 279 +++++++++++++++++--------- R/gg_qq.R | 268 ++++++++++++++++++------- R/gg_raster.R | 261 +++++++++++++++++------- R/gg_rect.R | 283 ++++++++++++++++++-------- R/gg_ribbon.R | 280 +++++++++++++++++--------- R/gg_segment.R | 270 ++++++++++++++++++------- R/gg_sf.R | 153 +++++--------- R/gg_smooth.R | 279 ++++++++++++++++++-------- R/gg_step.R | 268 ++++++++++++++++++------- R/gg_text.R | 274 ++++++++++++++++++------- R/gg_theme.R | 14 - R/gg_tile.R | 255 +++++++++++++++++------- R/gg_violin.R | 273 ++++++++++++++++++------- R/utils.R | 2 README.md | 24 +- inst/doc/ggblanket.R | 79 +++---- inst/doc/ggblanket.Rmd | 105 +++++---- inst/doc/ggblanket.html | 328 +++++++++++++++---------------- man/figures/README-unnamed-chunk-2-1.png |binary man/figures/README-unnamed-chunk-3-1.png |binary man/figures/ggiraph_screenshot.png |binary man/gg_area.Rd | 39 ++- man/gg_bar.Rd | 39 ++- man/gg_bin2d.Rd | 32 ++- man/gg_blank.Rd | 38 ++- man/gg_boxplot.Rd | 44 ++-- man/gg_col.Rd | 42 +++ man/gg_crossbar.Rd | 42 +++ man/gg_density.Rd | 42 ++- man/gg_errorbar.Rd | 55 ++--- man/gg_freqpoly.Rd | 40 ++- man/gg_function.Rd | 32 ++- man/gg_hex.Rd | 34 ++- man/gg_histogram.Rd | 42 ++- man/gg_jitter.Rd | 38 ++- man/gg_label.Rd | 41 +++ man/gg_line.Rd | 39 ++- man/gg_linerange.Rd | 40 ++- man/gg_path.Rd | 35 ++- man/gg_point.Rd | 41 ++- man/gg_pointrange.Rd | 43 ++-- man/gg_polygon.Rd | 44 +--- man/gg_qq.Rd | 34 ++- man/gg_raster.Rd | 34 ++- man/gg_rect.Rd | 45 +++- man/gg_ribbon.Rd | 42 ++- man/gg_segment.Rd | 34 ++- man/gg_sf.Rd | 22 +- man/gg_smooth.Rd | 44 ++-- man/gg_step.Rd | 33 ++- man/gg_text.Rd | 40 +++ man/gg_theme.Rd | 14 - man/gg_tile.Rd | 22 +- man/gg_violin.Rd | 39 ++- man/ggblanket-package.Rd | 6 man/na_if_double.Rd | 4 vignettes/ggblanket.Rmd | 105 +++++---- 80 files changed, 7306 insertions(+), 3407 deletions(-)
Title: Spatial Data Analysis
Description: Methods for spatial data analysis with vector (points, lines, polygons) and raster (grid) data. Methods for vector data include standard operations such as intersect and buffer. Raster methods include global, local, zonal, and focal computations. The predict and interpolate methods facilitate the use of regression type (interpolation, machine learning) models for spatial prediction, including with satellite remote sensing data. Processing of very large files is supported. See the manual and tutorials on <https://rspatial.org/terra/> to get started. 'terra' is a replacement for the 'raster' package ('terra' can do more, and it is faster and easier to use).
Author: Robert J. Hijmans [cre, aut] ,
Roger Bivand [ctb] ,
Edzer Pebesma [ctb] ,
Michael D. Sumner [ctb]
Maintainer: Robert J. Hijmans <r.hijmans@gmail.com>
Diff between terra versions 1.7-3 dated 2023-01-24 and 1.7-18 dated 2023-03-06
terra-1.7-18/terra/DESCRIPTION | 14 terra-1.7-18/terra/MD5 | 268 ++-- terra-1.7-18/terra/NAMESPACE | 2 terra-1.7-18/terra/NEWS.md | 78 - terra-1.7-18/terra/R/Agenerics.R | 11 terra-1.7-18/terra/R/Arith_generics.R | 107 + terra-1.7-18/terra/R/SpatRasterDataset.R | 45 terra-1.7-18/terra/R/animate.R | 4 terra-1.7-18/terra/R/clip.R |only terra-1.7-18/terra/R/coerce.R | 4 terra-1.7-18/terra/R/crs.R | 60 terra-1.7-18/terra/R/gdal.R | 3 terra-1.7-18/terra/R/generics.R | 58 terra-1.7-18/terra/R/geom.R | 4 terra-1.7-18/terra/R/hist.R | 2 terra-1.7-18/terra/R/image.R | 2 terra-1.7-18/terra/R/layerCor.R | 65 terra-1.7-18/terra/R/levels.R | 27 terra-1.7-18/terra/R/lines.R | 27 terra-1.7-18/terra/R/merge.R | 8 terra-1.7-18/terra/R/ncdf.R | 7 terra-1.7-18/terra/R/options.R | 8 terra-1.7-18/terra/R/panel.R |only terra-1.7-18/terra/R/plot.R | 21 terra-1.7-18/terra/R/plotRGB.R | 4 terra-1.7-18/terra/R/plot_2rasters.R |only terra-1.7-18/terra/R/plot_legend.R | 346 +++-- terra-1.7-18/terra/R/plot_let.R | 63 terra-1.7-18/terra/R/plot_raster.R | 281 ++-- terra-1.7-18/terra/R/plot_scale.R | 71 - terra-1.7-18/terra/R/plot_vector.R | 153 +- terra-1.7-18/terra/R/predict.R | 44 terra-1.7-18/terra/R/rast.R | 40 terra-1.7-18/terra/R/rasterize.R | 211 ++- terra-1.7-18/terra/R/rowSums.R |only terra-1.7-18/terra/R/sample.R | 1607 ++++++++++++------------ terra-1.7-18/terra/R/spatDF.R | 23 terra-1.7-18/terra/R/spatvec.R | 27 terra-1.7-18/terra/R/subset.R | 8 terra-1.7-18/terra/R/values.R | 23 terra-1.7-18/terra/R/vect.R | 109 - terra-1.7-18/terra/R/xyRowColCell.R | 4 terra-1.7-18/terra/R/zonal.R | 61 terra-1.7-18/terra/configure | 13 terra-1.7-18/terra/configure.ac | 14 terra-1.7-18/terra/inst/tinytest/test_extract.R | 34 terra-1.7-18/terra/inst/tinytest/test_merge.R | 19 terra-1.7-18/terra/man/aggregate.Rd | 4 terra-1.7-18/terra/man/app.Rd | 2 terra-1.7-18/terra/man/as.data.frame.Rd | 90 - terra-1.7-18/terra/man/as.spatvector.Rd | 166 +- terra-1.7-18/terra/man/buffer.Rd | 16 terra-1.7-18/terra/man/cellSize.Rd | 13 terra-1.7-18/terra/man/clamp_ts.Rd | 2 terra-1.7-18/terra/man/click.Rd | 2 terra-1.7-18/terra/man/compare-generics.Rd | 27 terra-1.7-18/terra/man/coords.Rd | 3 terra-1.7-18/terra/man/crop.Rd | 2 terra-1.7-18/terra/man/crs.Rd | 2 terra-1.7-18/terra/man/draw.Rd | 2 terra-1.7-18/terra/man/extract.Rd | 17 terra-1.7-18/terra/man/focal.Rd | 220 +-- terra-1.7-18/terra/man/intersect.Rd | 8 terra-1.7-18/terra/man/is.lonlat.Rd | 5 terra-1.7-18/terra/man/lines.Rd | 7 terra-1.7-18/terra/man/merge.Rd | 9 terra-1.7-18/terra/man/meta.Rd |only terra-1.7-18/terra/man/not.na.Rd | 3 terra-1.7-18/terra/man/panel.Rd |only terra-1.7-18/terra/man/patches.Rd | 2 terra-1.7-18/terra/man/plet.Rd | 19 terra-1.7-18/terra/man/plot.Rd | 68 - terra-1.7-18/terra/man/plotRGB.Rd | 2 terra-1.7-18/terra/man/project.Rd | 8 terra-1.7-18/terra/man/rapp.Rd | 2 terra-1.7-18/terra/man/rast.Rd | 3 terra-1.7-18/terra/man/rasterize.Rd | 18 terra-1.7-18/terra/man/sbar.Rd | 8 terra-1.7-18/terra/man/scatter.Rd | 3 terra-1.7-18/terra/man/setValues.Rd | 142 +- terra-1.7-18/terra/man/shade.Rd | 2 terra-1.7-18/terra/man/simplify.Rd | 98 - terra-1.7-18/terra/man/sort.Rd | 21 terra-1.7-18/terra/man/subset_single.Rd | 30 terra-1.7-18/terra/man/summarize-generics.Rd | 19 terra-1.7-18/terra/man/terra-package.Rd | 1296 +++++++++---------- terra-1.7-18/terra/man/terraOptions.Rd | 9 terra-1.7-18/terra/man/terrain.Rd | 20 terra-1.7-18/terra/man/values.Rd | 4 terra-1.7-18/terra/man/vect.Rd | 5 terra-1.7-18/terra/man/which.Rd | 2 terra-1.7-18/terra/man/zonal.Rd | 211 +-- terra-1.7-18/terra/src/Makevars.in | 2 terra-1.7-18/terra/src/Makevars.ucrt | 2 terra-1.7-18/terra/src/Makevars.win | 2 terra-1.7-18/terra/src/RcppFunctions.cpp | 6 terra-1.7-18/terra/src/RcppModule.cpp | 50 terra-1.7-18/terra/src/arith.cpp | 262 ++- terra-1.7-18/terra/src/crs.cpp | 8 terra-1.7-18/terra/src/distRaster.cpp | 123 + terra-1.7-18/terra/src/file_utils.cpp | 6 terra-1.7-18/terra/src/gcp.cpp | 2 terra-1.7-18/terra/src/gdal_algs.cpp | 77 - terra-1.7-18/terra/src/gdalio.cpp | 16 terra-1.7-18/terra/src/geos_methods.cpp | 104 - terra-1.7-18/terra/src/geos_spat.h | 36 terra-1.7-18/terra/src/movingWindow.cpp | 4 terra-1.7-18/terra/src/raster_methods.cpp | 244 ++- terra-1.7-18/terra/src/raster_stats.cpp | 22 terra-1.7-18/terra/src/rasterize.cpp | 251 +++ terra-1.7-18/terra/src/read.cpp | 29 terra-1.7-18/terra/src/read_gdal.cpp | 260 +++ terra-1.7-18/terra/src/read_ogr.cpp | 59 terra-1.7-18/terra/src/sample.cpp | 100 - terra-1.7-18/terra/src/sort.cpp |only terra-1.7-18/terra/src/sort.h | 18 terra-1.7-18/terra/src/spatBase.cpp | 10 terra-1.7-18/terra/src/spatBase.h | 4 terra-1.7-18/terra/src/spatDataframe.cpp | 179 ++ terra-1.7-18/terra/src/spatDataframe.h | 5 terra-1.7-18/terra/src/spatFactor.cpp | 1 terra-1.7-18/terra/src/spatFactor.h | 1 terra-1.7-18/terra/src/spatRaster.cpp | 87 - terra-1.7-18/terra/src/spatRaster.h | 85 - terra-1.7-18/terra/src/spatRasterMultiple.cpp | 76 - terra-1.7-18/terra/src/spatRasterMultiple.h | 4 terra-1.7-18/terra/src/spatSources.cpp | 4 terra-1.7-18/terra/src/spatTime.h | 1 terra-1.7-18/terra/src/spatVector.cpp | 55 terra-1.7-18/terra/src/spatVector.h | 17 terra-1.7-18/terra/src/spatVector2.cpp | 2 terra-1.7-18/terra/src/string_utils.cpp | 2 terra-1.7-18/terra/src/vecmath.h | 2 terra-1.7-18/terra/src/vector_methods.cpp | 2 terra-1.7-18/terra/src/write.cpp | 14 terra-1.7-18/terra/src/write_gdal.cpp | 14 terra-1.7-18/terra/src/write_ogr.cpp | 32 terra-1.7-3/terra/R/plot2rasters.R |only terra-1.7-3/terra/src/concaveman.cpp |only terra-1.7-3/terra/src/concaveman.h |only 140 files changed, 5223 insertions(+), 3629 deletions(-)
Title: 'Rcpp' Bindings to 'FastAD' Auto-Differentiation
Description: The header-only 'C++' template library 'FastAD' for automatic
differentiation <https://github.com/JamesYang007/FastAD> is provided by
this package, along with a few illustrative examples that can all be called
from R.
Author: Dirk Eddelbuettel [aut, cre] ,
James Yang [aut]
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppFastAD versions 0.0.1 dated 2023-02-27 and 0.0.2 dated 2023-03-06
RcppFastAD-0.0.1/RcppFastAD/inst/tinytest/test_RcppFastAD.R |only RcppFastAD-0.0.2/RcppFastAD/ChangeLog | 42 +++++++++- RcppFastAD-0.0.2/RcppFastAD/DESCRIPTION | 17 ++-- RcppFastAD-0.0.2/RcppFastAD/MD5 | 18 ++-- RcppFastAD-0.0.2/RcppFastAD/README.md | 5 - RcppFastAD-0.0.2/RcppFastAD/build/partial.rdb |binary RcppFastAD-0.0.2/RcppFastAD/inst/NEWS.Rd | 12 ++ RcppFastAD-0.0.2/RcppFastAD/inst/include/fastad_bits/reverse/core/value_view.hpp | 7 + RcppFastAD-0.0.2/RcppFastAD/inst/tinytest/test_black_scholes.R |only RcppFastAD-0.0.2/RcppFastAD/inst/tinytest/test_linear_regression.R |only RcppFastAD-0.0.2/RcppFastAD/inst/tinytest/test_quadratic_expression.R |only RcppFastAD-0.0.2/RcppFastAD/src/quadratic_expression.cpp | 12 +- 12 files changed, 85 insertions(+), 28 deletions(-)
Title: Propensity Score Matching for Unordered 3-Group Data
Description: You can use this program for 3 sets of categorical data for propensity score matching.
Assume that the data has 3 different categorical variables. You can use it to perform propensity matching of baseline indicator groupings.
The matching will make the differences in the baseline data smaller.
This method was described by Alvaro Fuentes (2022) <doi:10.1080/00273171.2021.1925521>.
Author: Qiang LIU [aut, cre]
Maintainer: Qiang LIU <dege857@163.com>
Diff between pm3 versions 0.1.0 dated 2023-03-03 and 0.1.2 dated 2023-03-06
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- R/pm3.R | 7 ++++--- R/pm3datalist.R | 12 ++++++++---- R/pm3fit.R | 2 +- man/pm3.Rd | 7 ++++--- man/pm3datalist.Rd | 2 +- man/pm3fit.Rd | 2 +- 8 files changed, 29 insertions(+), 23 deletions(-)
More information about PHEindicatormethods at CRAN
Permanent link
Title: Hidden Hybrid Markov/Semi-Markov Model Fitting
Description: Develops algorithms for fitting, prediction, simulation
and initialization of the hidden hybrid Markov/semi-Markov model,
introduced by Guedon (2005) <doi:10.1016/j.csda.2004.05.033>,
which also includes several tools for handling missing data,
nonparametric mixture of B-splines emissions (Langrock et al., 2015
<doi:10.1111/biom.12282>), fitting regime switching regression
(Kim et al., 2008 <doi:10.1016/j.jeconom.2007.10.002>) and auto-regressive
hidden hybrid Markov/semi-Markov model, spline-based nonparametric
estimation of additive state-switching models
(Langrock et al., 2018 <doi:10.1111/stan.12133>)
and many other useful tools
(read for more description: Amini et al., 2022 <doi:10.1007/s00180-022-01248-x> and its
arxiv version: <arXiv:2109.12489>).
Author: Morteza Amini [aut, cre, cph],
Afarin Bayat [aut],
Reza Salehian [aut]
Maintainer: Morteza Amini <morteza.amini@ut.ac.ir>
Diff between hhsmm versions 0.3.4 dated 2023-01-07 and 0.3.5 dated 2023-03-06
DESCRIPTION | 11 +++++------ MD5 | 19 +++++++++++++------ NAMESPACE | 7 +++++-- R/discret-check.R |only R/dmultinomial-hhsmm.R |only R/dnonpar.R | 13 +++++++++---- R/initial-cluster.R | 8 +++++++- R/mstep-multinomial.R |only R/nonpar_mstep.R | 17 ++++++++++------- R/rmultinomial-hhsmm.R |only inst/CITATION | 6 +++--- man/dmultinomial.hhsmm.Rd |only man/mstep.multinomial.Rd |only man/rmultinomial.hhsmm.Rd |only 14 files changed, 52 insertions(+), 29 deletions(-)
Title: Convolution-Type Smoothed Quantile Regression
Description: Estimation and inference for conditional linear quantile regression models using a convolution smoothed approach. In the low-dimensional setting, efficient gradient-based methods are employed for fitting both a single model and a regression process over a quantile range. Normal-based and (multiplier) bootstrap confidence intervals for all slope coefficients are constructed. In high dimensions, the conquer method is complemented with flexible types of penalties (Lasso, elastic-net, group lasso, sparse group lasso, scad and mcp) to deal with complex low-dimensional structures.
Author: Xuming He [aut],
Xiaoou Pan [aut, cre],
Kean Ming Tan [aut],
Wen-Xin Zhou [aut]
Maintainer: Xiaoou Pan <xip024@ucsd.edu>
Diff between conquer versions 1.3.2 dated 2023-02-05 and 1.3.3 dated 2023-03-06
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ R/RcppExports.R | 4 ++++ R/smqr.R | 20 ++------------------ README.md | 15 +++++++++------ src/RcppExports.cpp | 18 ++++++++++++++++++ src/lowd.cpp | 21 +++++++++++++++++++++ 7 files changed, 64 insertions(+), 34 deletions(-)
Title: Africa Macroeconomic Monitor Database API
Description: An R API providing access to a relational database with macroeconomic data for Africa.
The database contains >700 macroeconomic time series from mostly international sources,
grouped into 50 macroeconomic and development-related topics. Series are carefully selected
on the basis of data coverage for Africa, frequency, and relevance to the macro-development context.
The project is part of the 'Kiel Institute Africa Initiative'
<https://www.ifw-kiel.de/institute/initiatives/kielinstituteafricainitiative/>,
which, amongst other things, aims to develop a parsimonious database with highly relevant indicators
to monitor macroeconomic developments in Africa, accessible through a fast API and a web-based platform
at <https://africamonitor.ifw-kiel.de/>.
The database is maintained at the Kiel Institute for the World Economy <https://www.ifw-kiel.de/>.
Author: Sebastian Krantz [aut, cre]
Maintainer: Sebastian Krantz <sebastian.krantz@graduateinstitute.ch>
Diff between africamonitor versions 0.2.2 dated 2022-11-30 and 0.2.3 dated 2023-03-06
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 5 +++++ tests/testthat/test-accessdb.R | 2 +- 4 files changed, 12 insertions(+), 7 deletions(-)
Title: Prediction Intervals with Random Forests and Boosted Forests
Description: Implements various prediction interval methods with random forests and boosted forests.
The package has two main functions: pibf() produces prediction intervals with boosted forests
(PIBF) as described in Alakus et al. (2022) <doi:10.32614/RJ-2022-012> and rfpi() builds 15
distinct variations of prediction intervals with random forests (RFPI) proposed by Roy and
Larocque (2020) <doi:10.1177/0962280219829885>.
Author: Cansu Alakus [aut, cre],
Denis Larocque [aut],
Aurelie Labbe [aut],
Hemant Ishwaran [ctb] ,
Udaya B. Kogalur [ctb]
Maintainer: Cansu Alakus <cansu.alakus@hec.ca>
Diff between RFpredInterval versions 1.0.6 dated 2022-05-25 and 1.0.7 dated 2023-03-06
DESCRIPTION | 12 ++++++------ MD5 | 20 ++++++++++---------- NEWS.md | 4 ++++ R/RFpredInterval-package.R | 8 ++++---- R/pibf.R | 6 +++--- configure | 18 +++++++++--------- configure.ac | 2 +- src/randomForestSRC.c | 40 ++++++++++++++++++++-------------------- src/randomForestSRC.h | 40 ++++++++++++++++++++-------------------- src/splitCustom.c | 2 +- src/splitCustom.h | 2 +- 11 files changed, 79 insertions(+), 75 deletions(-)
More information about RFpredInterval at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-02-12 0.7.0
2022-10-25 0.5.0
2022-02-25 0.2.1
2022-01-28 0.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-02-06 1.2.0
2021-09-13 1.1.0
2021-03-26 1.0.0
2021-01-21 0.0.1.6