Title: Interface to 'MLflow'
Description: R interface to 'MLflow', open source platform for
the complete machine learning life cycle, see <https://mlflow.org/>.
This package supports installing 'MLflow', tracking experiments,
creating and running projects, and saving and serving models.
Author: Matei Zaharia [aut, cre],
Javier Luraschi [aut],
Kevin Kuo [aut] ,
RStudio [cph]
Maintainer: Matei Zaharia <matei@databricks.com>
Diff between mlflow versions 2.2.2 dated 2023-03-15 and 2.3.2 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/tracking-experiments.R | 6 +----- README.md | 2 -- tests/testthat/test-tracking-experiments.R | 12 ++++++++---- 5 files changed, 16 insertions(+), 18 deletions(-)
Title: Causal Decomposition of Group Disparities
Description: The causal decompositions of group disparities developed by
Yu and Elwert (2023)
<https://ang-yu.github.io/files/Causal_Decomposition_of_Group_Disparities_2023.pdf>.
This package implements the estimators for the decomposition
components that are based on efficient influence functions. For the
nuisance functions of the estimators, both parametric and
nonparametric options are provided, as well as manual options in case
the default models are not satisfying.
Author: Ang Yu [aut, cre, cph]
Maintainer: Ang Yu <ang_yu@outlook.com>
Diff between cdgd versions 0.3.0 dated 2023-04-19 and 0.3.1 dated 2023-05-19
DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- NEWS.md | 6 ++++++ R/cdgd0_ml.R | 36 ++++++++++++++++++------------------ R/cdgd1_ml.R | 53 +++++++++++++++++++++++++++++++---------------------- README.md | 14 +++++++++++--- 6 files changed, 76 insertions(+), 53 deletions(-)
Title: Highest Quality GIF Encoder
Description: Multi-threaded GIF encoder written in Rust: <https://gif.ski/>.
Converts images to GIF animations using pngquant's efficient cross-frame
palettes and temporal dithering with thousands of colors per frame.
Author: Jeroen Ooms [aut, cre] ,
Kornel Lesinski [cph]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between gifski versions 1.6.6-1 dated 2022-04-05 and 1.12.0 dated 2023-05-19
gifski-1.12.0/gifski/DESCRIPTION | 6 gifski-1.12.0/gifski/MD5 | 24 - gifski-1.12.0/gifski/NEWS | 4 gifski-1.12.0/gifski/configure | 11 gifski-1.12.0/gifski/configure.ucrt |only gifski-1.12.0/gifski/src/Makevars.win | 6 gifski-1.12.0/gifski/src/Makevars.win.build |only gifski-1.12.0/gifski/src/myrustlib/Cargo.lock | 425 +++++++++++++++----------- gifski-1.12.0/gifski/src/myrustlib/Cargo.toml | 2 gifski-1.12.0/gifski/src/myrustlib/gifski.h | 44 ++ gifski-1.12.0/gifski/src/old-1.4.3 |only gifski-1.12.0/gifski/src/old-1.6.6 |only gifski-1.6.6-1/gifski/src/Makevars.ucrt |only gifski-1.6.6-1/gifski/src/Makevars.win.rust |only gifski-1.6.6-1/gifski/src/legacy |only 15 files changed, 325 insertions(+), 197 deletions(-)
Title: Propensity to Cycle Tool
Description: Functions and example data to teach and
increase the reproducibility of the methods and code underlying
the Propensity to Cycle Tool (PCT), a research project and web application
hosted at <https://www.pct.bike/>.
For an academic paper on the methods,
see Lovelace et al (2017) <doi:10.5198/jtlu.2016.862>.
Author: Robin Lovelace [aut, cre] ,
Layik Hama [aut] ,
Nathanael Sheehan [ctb]
Maintainer: Robin Lovelace <rob00x@gmail.com>
Diff between pct versions 0.9.8 dated 2023-02-15 and 0.9.9 dated 2023-05-19
DESCRIPTION | 8 MD5 | 58 +-- NEWS.md | 7 R/data.R | 3 R/desire_lines.R | 2 R/msoa_centroids.R | 8 R/uptake.R | 8 README.md | 57 ++- build/vignette.rds |binary inst/doc/cycling-potential-uk.Rmd | 6 inst/doc/cycling-potential-uk.html | 418 ++++++++++-------------- inst/doc/km-cycled.Rmd | 2 inst/doc/km-cycled.html | 499 ++++++++++++---------------- inst/doc/pct-international.html | 328 ++++++++---------- inst/doc/pct.Rmd | 2 inst/doc/pct.html | 607 ++++++++++++----------------------- inst/doc/uk-cities.Rmd | 4 inst/doc/uk-cities.html | 320 +++++++----------- man/figures/README-decayhills-1.png |binary man/figures/README-rnetgove-1.png |binary man/figures/README-routes_fast-1.png |binary man/get_centroids_ew.Rd | 4 man/get_desire_lines.Rd | 2 man/santiago_routes_cs.Rd | 1 man/wight_routes_30.Rd | 1 man/wight_zones.Rd | 1 vignettes/cycling-potential-uk.Rmd | 6 vignettes/km-cycled.Rmd | 2 vignettes/pct.Rmd | 2 vignettes/uk-cities.Rmd | 4 30 files changed, 1022 insertions(+), 1338 deletions(-)
Title: Convex Hull
Description: Computes the convex hull in arbitrary dimension, based on the
Qhull library (<http://www.qhull.org>). The package provides a
complete description of the convex hull: edges, ridges, facets,
adjacencies. Triangulation is optional.
Author: C. B. Barber [cph] ,
The Geometry Center [cph],
Stephane Laurent [cph, aut, cre]
Maintainer: Stephane Laurent <laurent_step@outlook.fr>
Diff between cxhull versions 0.7.2 dated 2023-03-08 and 0.7.3 dated 2023-05-19
DESCRIPTION | 10 +++++----- MD5 | 8 ++++---- NEWS.md | 6 ++++++ R/plot.R | 13 ++++++++----- man/plotConvexHull3d.Rd | 5 ++++- 5 files changed, 27 insertions(+), 15 deletions(-)
Title: Clean Class-Less 'R Markdown' HTML Documents
Description: A collection of clean 'R Markdown' HTML document templates
using classy-looking classless CSS styles. These documents use a
minimal set of dependencies but still look great, making them suitable
for use a package vignettes or for sharing results via email.
Author: Garrick Aden-Buie [aut, cre, cph]
,
Igor Adamenko [ctb, cph] ,
Alvaro Montoro [ctb, cph] ,
Ruan Martinelli [ctb, cph] ,
Tran Ngoc Tuan Anh [ctb, cph] ,
Marco Pontili [ctb, cph] ,
Evgeny Orekhov [ctb, cph] ,
Vincent Dorig [ctb, cph] ,
Yegor Bugayenko [...truncated...]
Maintainer: Garrick Aden-Buie <garrick@adenbuie.com>
Diff between cleanrmd versions 0.1.0 dated 2022-06-14 and 0.1.1 dated 2023-05-19
cleanrmd-0.1.0/cleanrmd/tests/manual/001-minimal_files |only cleanrmd-0.1.1/cleanrmd/DESCRIPTION | 8 cleanrmd-0.1.1/cleanrmd/MD5 | 150 -- cleanrmd-0.1.1/cleanrmd/NEWS.md | 13 cleanrmd-0.1.1/cleanrmd/R/html_document_clean.R | 4 cleanrmd-0.1.1/cleanrmd/R/sysdata.rda |binary cleanrmd-0.1.1/cleanrmd/README.md | 75 - cleanrmd-0.1.1/cleanrmd/inst/resources/almond/almond.css | 2 cleanrmd-0.1.1/cleanrmd/inst/resources/axist/axist.css | 12 cleanrmd-0.1.1/cleanrmd/inst/resources/bamboo/bamboo.css | 2 cleanrmd-0.1.1/cleanrmd/inst/resources/bullframe/bullframe-classless.min.css.map | 2 cleanrmd-0.1.1/cleanrmd/inst/resources/bullframe/bullframe.css | 4 cleanrmd-0.1.1/cleanrmd/inst/resources/holiday/holiday.css | 223 ++- cleanrmd-0.1.1/cleanrmd/inst/resources/latex.css/fonts/Libertinus-bold-italic.woff2 |only cleanrmd-0.1.1/cleanrmd/inst/resources/latex.css/fonts/Libertinus-bold.woff2 |only cleanrmd-0.1.1/cleanrmd/inst/resources/latex.css/fonts/Libertinus-italic.woff2 |only cleanrmd-0.1.1/cleanrmd/inst/resources/latex.css/fonts/Libertinus-regular.woff2 |only cleanrmd-0.1.1/cleanrmd/inst/resources/latex.css/fonts/Libertinus-semibold-italic.woff2 |only cleanrmd-0.1.1/cleanrmd/inst/resources/latex.css/fonts/Libertinus-semibold.woff2 |only cleanrmd-0.1.1/cleanrmd/inst/resources/latex.css/latex.css | 106 + cleanrmd-0.1.1/cleanrmd/inst/resources/picocss/pico.css | 6 cleanrmd-0.1.1/cleanrmd/inst/resources/sakura-vader/sakura-vader.css | 158 +- cleanrmd-0.1.1/cleanrmd/inst/resources/sakura/sakura.css | 166 +- cleanrmd-0.1.1/cleanrmd/inst/resources/simplecss/simple.css | 2 cleanrmd-0.1.1/cleanrmd/inst/resources/vanilla/vanilla.css | 33 cleanrmd-0.1.1/cleanrmd/inst/template/cleanrmd.html | 25 cleanrmd-0.1.1/cleanrmd/man/cleanrmd_themes.Rd | 4 cleanrmd-0.1.1/cleanrmd/man/html_document_clean.Rd | 12 cleanrmd-0.1.1/cleanrmd/man/rmd-fragments/usage.Rmd | 6 cleanrmd-0.1.1/cleanrmd/man/use_cleanrmd.Rd | 6 cleanrmd-0.1.1/cleanrmd/tests/manual/001-minimal.Rmd | 9 cleanrmd-0.1.1/cleanrmd/tests/manual/001-minimal.html | 714 ++++++++-- 32 files changed, 1263 insertions(+), 479 deletions(-)
Title: Crew Launcher Plugins for Traditional High-Performance Computing
Clusters
Description: In computationally demanding analysis projects,
statisticians and data scientists asynchronously
deploy long-running tasks to distributed systems,
ranging from traditional clusters to cloud services.
The 'crew.cluster' package extends the 'mirai'-powered
'crew' package with worker launcher plugins for traditional
high-performance computing systems.
Inspiration also comes from packages 'mirai' by Gao (2023)
<https://github.com/shikokuchuo/mirai>,
'future' by Bengtsson (2021) <doi:10.32614/RJ-2021-048>,
'rrq' by FitzJohn and Ashton (2023) <https://github.com/mrc-ide/rrq>,
'clustermq' by Schubert (2019) <doi:10.1093/bioinformatics/btz284>),
and 'batchtools' by Lang, Bischl, and Surmann (2017).
<doi:10.21105/joss.00135>.
Author: William Michael Landau [aut, cre]
,
Michael Gilbert Levin [aut] ,
Eli Lilly and Company [cph]
Maintainer: William Michael Landau <will.landau@gmail.com>
Diff between crew.cluster versions 0.0.2 dated 2023-04-25 and 0.1.0 dated 2023-05-19
crew.cluster-0.0.2/crew.cluster/tests/sge/transient.R |only crew.cluster-0.1.0/crew.cluster/DESCRIPTION | 16 crew.cluster-0.1.0/crew.cluster/MD5 | 66 +- crew.cluster-0.1.0/crew.cluster/NAMESPACE | 14 crew.cluster-0.1.0/crew.cluster/NEWS.md | 10 crew.cluster-0.1.0/crew.cluster/R/crew_controller_lsf.R |only crew.cluster-0.1.0/crew.cluster/R/crew_controller_pbs.R |only crew.cluster-0.1.0/crew.cluster/R/crew_controller_sge.R | 49 - crew.cluster-0.1.0/crew.cluster/R/crew_controller_slurm.R |only crew.cluster-0.1.0/crew.cluster/R/crew_launcher_cluster.R |only crew.cluster-0.1.0/crew.cluster/R/crew_launcher_lsf.R |only crew.cluster-0.1.0/crew.cluster/R/crew_launcher_pbs.R |only crew.cluster-0.1.0/crew.cluster/R/crew_launcher_sge.R | 253 ++++------ crew.cluster-0.1.0/crew.cluster/R/crew_launcher_slurm.R |only crew.cluster-0.1.0/crew.cluster/R/crew_package.R | 18 crew.cluster-0.1.0/crew.cluster/R/utils_names.R | 6 crew.cluster-0.1.0/crew.cluster/inst/WORDLIST | 3 crew.cluster-0.1.0/crew.cluster/man/crew.cluster-package.Rd | 12 crew.cluster-0.1.0/crew.cluster/man/crew_class_launcher_cluster.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_class_launcher_lsf.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_class_launcher_pbs.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_class_launcher_sge.Rd | 168 ++---- crew.cluster-0.1.0/crew.cluster/man/crew_class_launcher_slurm.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_controller_lsf.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_controller_pbs.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_controller_sge.Rd | 147 +++-- crew.cluster-0.1.0/crew.cluster/man/crew_controller_slurm.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_launcher_cluster.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_launcher_lsf.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_launcher_pbs.Rd |only crew.cluster-0.1.0/crew.cluster/man/crew_launcher_sge.Rd | 119 +++- crew.cluster-0.1.0/crew.cluster/man/crew_launcher_slurm.Rd |only crew.cluster-0.1.0/crew.cluster/tests/lsf |only crew.cluster-0.1.0/crew.cluster/tests/pbs |only crew.cluster-0.1.0/crew.cluster/tests/sge/minimal.R | 8 crew.cluster-0.1.0/crew.cluster/tests/sge/persistent.R | 2 crew.cluster-0.1.0/crew.cluster/tests/slurm |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_controller_lsf.R |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_controller_pbs.R |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_controller_sge.R | 35 - crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_controller_slurm.R |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_launcher_cluster.R |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_launcher_lsf.R |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_launcher_pbs.R |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_launcher_sge.R | 44 + crew.cluster-0.1.0/crew.cluster/tests/testthat/test-crew_launcher_slurm.R |only crew.cluster-0.1.0/crew.cluster/tests/testthat/test-utils_names.R | 7 47 files changed, 539 insertions(+), 438 deletions(-)
Title: Uniform Sampling
Description: Uniform sampling on various geometric shapes, such as
spheres, ellipsoids, simplices.
Author: Stephane Laurent
Maintainer: Stephane Laurent <laurent_step@outlook.fr>
Diff between uniformly versions 0.2.0 dated 2022-03-13 and 0.3.0 dated 2023-05-19
DESCRIPTION | 21 MD5 | 14 NEWS.md | 31 R/ellipsoid.R | 139 build/vignette.rds |binary inst/doc/convexhull.R | 224 - inst/doc/convexhull.html | 9648 +++++++++++++++++++++++++++++++++++++++++++++-- man/runif_ellipsoid.Rd | 28 8 files changed, 9577 insertions(+), 528 deletions(-)
Title: Summary Tables and Plots for Statistical Models and Data:
Beautiful, Customizable, and Publication-Ready
Description: Create beautiful and customizable tables to summarize several
statistical models side-by-side. Draw coefficient plots, multi-level
cross-tabs, dataset summaries, balance tables (a.k.a. "Table 1s"), and
correlation matrices. This package supports dozens of statistical models, and
it can produce tables in HTML, LaTeX, Word, Markdown, PDF, PowerPoint, Excel,
RTF, JPG, or PNG. Tables can easily be embedded in 'Rmarkdown' or 'knitr'
dynamic documents. Details can be found in Arel-Bundock (2022)
<doi:10.18637/jss.v103.i01>.
Author: Vincent Arel-Bundock [aut, cre]
,
Joachim Gassen [ctb] ,
Nathan Eastwood [ctb],
Nick Huntington-Klein [ctb] ,
Moritz Schwarz [ctb] ,
Benjamin Elbers [ctb] ,
Grant McDermott [ctb] ,
Lukas Wallrich [ctb]
Maintainer: Vincent Arel-Bundock <vincent.arel-bundock@umontreal.ca>
Diff between modelsummary versions 1.4.0 dated 2023-04-26 and 1.4.1 dated 2023-05-19
DESCRIPTION | 6 MD5 | 109 ++++++----- NAMESPACE | 1 NEWS.md | 13 + R/coef_rename.R | 6 R/datasummary.R | 39 ++-- R/datasummary_balance.R | 7 R/datasummary_correlation.R | 6 R/datasummary_crosstab.R | 24 +- R/datasummary_functions.R | 26 +- R/datasummary_skim.R | 9 R/factory_markdown.R | 7 R/fmt_factory.R | 35 +++ R/get_estimates.R | 11 - R/gof_map.R | 2 R/modelplot.R | 7 R/modelsummary.R | 177 ++++++++++++++++++- R/modelsummary_list.R | 2 R/modelsummary_rbind.R | 9 R/shape_estimates.R | 2 build/partial.rdb |binary inst/tinytest/_tinysnapshot/fmt-fmt_sci_2.txt |only inst/tinytest/_tinysnapshot/rbind-add_rows_rbind.txt |only inst/tinytest/fwlwmshffqllmyepodhgvjwsqxglzo.log |only inst/tinytest/test-fmt.R | 21 ++ inst/tinytest/test-rbind.R | 31 +++ inst/tinytest/test-shape.R | 25 ++ inst/tinytest/test-vcov.R | 15 + man/Max.Rd | 2 man/Mean.Rd | 2 man/Median.Rd | 2 man/Min.Rd | 2 man/N.Rd | 2 man/NUnique.Rd | 2 man/P0.Rd | 2 man/P100.Rd | 2 man/P25.Rd | 2 man/P50.Rd | 2 man/P75.Rd | 2 man/SD.Rd | 2 man/Var.Rd | 2 man/coef_rename.Rd | 10 - man/datasummary.Rd | 37 ++- man/datasummary_balance.Rd | 9 man/datasummary_correlation.Rd | 30 +-- man/datasummary_crosstab.Rd | 25 +- man/datasummary_skim.Rd | 11 - man/dsummary.Rd | 37 ++- man/figures |only man/fmt_sci.Rd |only man/gof_map.Rd | 2 man/modelplot.Rd | 8 man/modelsummary.Rd | 62 +++--- man/msummary.Rd | 62 +++--- 54 files changed, 627 insertions(+), 282 deletions(-)
Title: Analyzing the Lying Behavior of Cows from Accelerometer Data
Description: Assists in analyzing the lying behavior of cows from raw data
recorded with a triaxial accelerometer attached to the hind leg of a cow. Allows
the determination of common measures for lying behavior including total lying duration, the
number of lying bouts, and the mean duration of lying bouts. Further capabilities are the
description of lying laterality and the calculation of proxies for the level of physical
activity of the cow. Reference: Simmler M., Brouwers S. P. (2023) <https://gitlab.com/AgroSimi/triact_manuscript>.
Author: Michael Simmler [aut, cre] ,
Stijn Pieter Brouwers [ctb]
Maintainer: Michael Simmler <michael.simmler@agroscope.admin.ch>
Diff between triact versions 0.2.0 dated 2023-01-11 and 0.3.0 dated 2023-05-19
triact-0.2.0/triact/README.md |only triact-0.2.0/triact/inst/doc/introduction.pdf |only triact-0.3.0/triact/DESCRIPTION | 18 - triact-0.3.0/triact/MD5 | 38 +-- triact-0.3.0/triact/NEWS.md | 9 triact-0.3.0/triact/R/000_utils.R | 56 +--- triact-0.3.0/triact/R/001_load_methods.R | 123 ++++++--- triact-0.3.0/triact/R/002_check_methods.R | 5 triact-0.3.0/triact/R/003_add_methods.R | 93 ++++++- triact-0.3.0/triact/R/004_summarize_methods.R | 4 triact-0.3.0/triact/build/vignette.rds |binary triact-0.3.0/triact/data/cows_5hz.rda |binary triact-0.3.0/triact/inst/CITATION | 11 triact-0.3.0/triact/inst/doc/introduction.R | 85 ++++-- triact-0.3.0/triact/inst/doc/introduction.Rmd | 311 ++++++++++++++++++------- triact-0.3.0/triact/inst/doc/introduction.html |only triact-0.3.0/triact/man/Triact.Rd | 226 +++++++++++++----- triact-0.3.0/triact/man/bout_summary.Rd | 14 - triact-0.3.0/triact/man/cows_5hz.Rd | 19 + triact-0.3.0/triact/man/interval_summary.Rd | 11 triact-0.3.0/triact/vignettes/Fig_axes.png |only triact-0.3.0/triact/vignettes/introduction.Rmd | 311 ++++++++++++++++++------- 22 files changed, 945 insertions(+), 389 deletions(-)
More information about nonLinearDotPlot at CRAN
Permanent link
Title: ADaM Metadata Structure
Description: A metadata structure for clinical data analysis
and reporting based on Analysis Data Model (ADaM) datasets.
The package simplifies clinical analysis and reporting tool development
by defining standardized inputs, outputs, and workflow.
The package can be used to create analysis and reporting planning grid,
mock table, and validated analysis and reporting results based on
consistent inputs.
Author: Yilong Zhang [aut],
Yujie Zhao [aut, cre],
Nan Xiao [aut],
Benjamin Wang [ctb],
Brian Lang [ctb],
Howard Baek [ctb],
Ruchitbhai Patel [ctb],
Madhusudhan Ginnaram [ctb],
Sarad Nepal [ctb],
Venkatesh Burla [ctb],
Merck Sharp & Dohme Corp [cph]
Maintainer: Yujie Zhao <yujie.zhao@merck.com>
Diff between metalite versions 0.1.1 dated 2023-02-08 and 0.1.2 dated 2023-05-19
DESCRIPTION | 6 MD5 | 33 NAMESPACE | 1 NEWS.md | 8 R/collect_n_subject.R | 46 - R/meta_adam.R | 2 R/meta_example_exploration.R | 8 R/outdata.R | 1 R/plan.R | 2 R/sysdata.rda |binary README.md | 11 build/vignette.rds |binary inst/doc/ar-grid.html | 94 +- inst/doc/metalite.html | 16 inst/doc/mockup-table.html | 18 man/n_subject.Rd |only tests/testthat/test-independent-testing-collect_n_subject.R | 487 +++++++++++- tests/testthat/test-independent-testing-plan.R | 3 18 files changed, 607 insertions(+), 129 deletions(-)
Title: Cluster Gauss-Newton Method
Description: Find multiple solutions of a nonlinear least squares problem. Cluster Gauss-Newton method does not assume uniqueness of the solution of the nonlinear least squares problem and compute approximate multiple minimizers. Please cite the following paper when this software is used in your research: Aoki et al. (2020) <doi:10.1007/s11081-020-09571-2>. Cluster Gauss–Newton method. Optimization and Engineering, 1-31.
Author: Yasunori Aoki
Maintainer: Yasunori Aoki <yaoki@uwaterloo.ca>
Diff between CGNM versions 0.6.2 dated 2023-01-10 and 0.6.5 dated 2023-05-19
CGNM-0.6.2/CGNM/R/designOptimizer.R |only CGNM-0.6.5/CGNM/DESCRIPTION | 6 CGNM-0.6.5/CGNM/MD5 | 57 CGNM-0.6.5/CGNM/NAMESPACE | 4 CGNM-0.6.5/CGNM/R/Cluster_Gauss_Newton_method.R | 105 + CGNM-0.6.5/CGNM/R/PostProcess.R | 753 ++++++++++- CGNM-0.6.5/CGNM/build/vignette.rds |binary CGNM-0.6.5/CGNM/inst/doc/CGNM-vignette.R | 51 CGNM-0.6.5/CGNM/inst/doc/CGNM-vignette.Rmd | 62 CGNM-0.6.5/CGNM/inst/doc/CGNM-vignette.html | 451 +++--- CGNM-0.6.5/CGNM/man/Cluster_Gauss_Newton_Bootstrap_method.Rd | 2 CGNM-0.6.5/CGNM/man/Cluster_Gauss_Newton_method.Rd | 15 CGNM-0.6.5/CGNM/man/acceptedApproximateMinimizers.Rd | 2 CGNM-0.6.5/CGNM/man/acceptedIndices.Rd | 2 CGNM-0.6.5/CGNM/man/acceptedIndices_binary.Rd | 2 CGNM-0.6.5/CGNM/man/acceptedMaxSSR.Rd | 2 CGNM-0.6.5/CGNM/man/bestApproximateMinimizers.Rd | 2 CGNM-0.6.5/CGNM/man/plot_2DprofileLikelihood.Rd | 4 CGNM-0.6.5/CGNM/man/plot_Rank_SSR.Rd | 2 CGNM-0.6.5/CGNM/man/plot_SSR_parameterValue.Rd | 2 CGNM-0.6.5/CGNM/man/plot_goodnessOfFit.Rd | 16 CGNM-0.6.5/CGNM/man/plot_paraDistribution_byHistogram.Rd | 2 CGNM-0.6.5/CGNM/man/plot_paraDistribution_byViolinPlots.Rd | 2 CGNM-0.6.5/CGNM/man/plot_parameterValue_scatterPlots.Rd | 2 CGNM-0.6.5/CGNM/man/plot_profileLikelihood.Rd | 4 CGNM-0.6.5/CGNM/man/plot_simulationMatrixWithCI.Rd |only CGNM-0.6.5/CGNM/man/plot_simulationWithCI.Rd |only CGNM-0.6.5/CGNM/man/suggestInitialLowerRange.Rd |only CGNM-0.6.5/CGNM/man/suggestInitialUpperRange.Rd |only CGNM-0.6.5/CGNM/man/table_parameterSummary.Rd | 2 CGNM-0.6.5/CGNM/man/topIndices.Rd | 2 CGNM-0.6.5/CGNM/vignettes/CGNM-vignette.Rmd | 62 32 files changed, 1238 insertions(+), 378 deletions(-)
Title: Kinetic Evaluation of Chemical Degradation Data
Description: Calculation routines based on the FOCUS Kinetics Report (2006,
2014). Includes a function for conveniently defining differential equation
models, model solution based on eigenvalues if possible or using numerical
solvers. If a C compiler (on windows: 'Rtools') is installed, differential
equation models are solved using automatically generated C functions.
Heteroscedasticity can be taken into account using variance by variable or
two-component error models as described by Ranke and Meinecke (2018)
<doi:10.3390/environments6120124>. Hierarchical degradation models can
be fitted using nonlinear mixed-effects model packages as a back end as
described by Ranke et al. (2021) <doi:10.3390/environments8080071>. Please
note that no warranty is implied for correctness of results or fitness for a
particular purpose.
Author: Johannes Ranke [aut, cre, cph]
,
Katrin Lindenberger [ctb] ),
Rene Lehmann [ctb] and invilr),
Eurofins Regulatory AG [cph]
Maintainer: Johannes Ranke <johannes.ranke@jrwb.de>
Diff between mkin versions 1.2.3 dated 2023-04-17 and 1.2.4 dated 2023-05-19
DESCRIPTION | 8 MD5 | 54 NEWS.md | 10 R/D24_2014.R | 2 R/dimethenamid_2018.R | 2 R/endpoints.R | 5 R/hierarchical_kinetics.R | 4 R/multistart.R | 11 build/partial.rdb |binary build/vignette.rds |binary inst/doc/FOCUS_D.html | 18 inst/doc/FOCUS_L.html | 2040 ++++++------------------------- inst/doc/FOCUS_L.rmd | 7 inst/doc/dmta_parent_2022_prebuilt.pdf |binary inst/doc/dmta_pathway_2022_prebuilt.pdf |binary inst/doc/mkin.html | 1934 ++++------------------------- inst/doc/mkin.rmd | 10 inst/doc/twa.html | 2 man/D24_2014.Rd | 2 man/dimethenamid_2018.Rd | 2 man/hierarchical_kinetics.Rd | 4 man/multistart.Rd | 7 vignettes/FOCUS_L.rmd | 7 vignettes/mkin.rmd | 10 vignettes/prebuilt/2022_cyan_pathway.pdf |binary vignettes/prebuilt/2022_cyan_pathway.rmd | 45 vignettes/prebuilt/2022_dmta_pathway.pdf |binary vignettes/prebuilt/2022_dmta_pathway.rmd | 24 28 files changed, 870 insertions(+), 3338 deletions(-)
Title: Stepwise Elimination and Term Reordering for Mixed-Effects
Regression
Description: Finds the largest possible regression model that will still converge
for various types of regression analyses (including mixed models and generalized
additive models) and then optionally performs stepwise elimination similar to the
forward and backward effect-selection methods in SAS, based on the change in
log-likelihood or its significance, Akaike's Information Criterion, the Bayesian
Information Criterion, the explained deviance, or the F-test of the change in R².
Author: Cesko C. Voeten [aut, cre]
Maintainer: Cesko C. Voeten <cvoeten@gmail.com>
Diff between buildmer versions 2.8 dated 2023-01-06 and 2.9 dated 2023-05-19
ChangeLog | 16 DESCRIPTION | 8 MD5 | 22 R/buildmer-private.R | 2 R/control.R | 4 R/utility.R | 31 build/vignette.rds |binary inst/doc/buildmer.R | 432 +++---- inst/doc/buildmer.html | 1902 +++++++++++++++++------------------ man/converged.Rd | 2 man/re2mgcv.Rd | 4 tests/testthat/data/buildmertree.csv | 7 12 files changed, 1228 insertions(+), 1202 deletions(-)
Title: Plane Geometry
Description: An extensive set of plane geometry routines. Provides R6
classes representing triangles, circles, circular arcs, ellipses,
elliptical arcs and lines, and their plot methods. Also provides R6
classes representing transformations: rotations, reflections,
homotheties, scalings, general affine transformations, inversions,
Möbius transformations.
Author: Stephane Laurent
Maintainer: Stephane Laurent <laurent_step@outlook.fr>
Diff between PlaneGeometry versions 1.3.1 dated 2022-01-13 and 1.4.0 dated 2023-05-19
PlaneGeometry-1.3.1/PlaneGeometry/R/EllipticIntegral.R |only PlaneGeometry-1.3.1/PlaneGeometry/man/ellint2.Rd |only PlaneGeometry-1.4.0/PlaneGeometry/DESCRIPTION | 29 PlaneGeometry-1.4.0/PlaneGeometry/MD5 | 62 PlaneGeometry-1.4.0/PlaneGeometry/NAMESPACE | 14 PlaneGeometry-1.4.0/PlaneGeometry/NEWS.md | 149 PlaneGeometry-1.4.0/PlaneGeometry/R/Circle.R | 1351 ++-- PlaneGeometry-1.4.0/PlaneGeometry/R/Ellipse.R | 1778 +++--- PlaneGeometry-1.4.0/PlaneGeometry/R/EllipticalArc.R | 22 PlaneGeometry-1.4.0/PlaneGeometry/build/vignette.rds |binary PlaneGeometry-1.4.0/PlaneGeometry/inst/doc/examples.R | 2300 +++---- PlaneGeometry-1.4.0/PlaneGeometry/inst/doc/examples.Rmd | 2846 ++++----- PlaneGeometry-1.4.0/PlaneGeometry/inst/doc/examples.html | 2948 +++++----- PlaneGeometry-1.4.0/PlaneGeometry/man/Affine.Rd | 54 PlaneGeometry-1.4.0/PlaneGeometry/man/Arc.Rd | 48 PlaneGeometry-1.4.0/PlaneGeometry/man/Circle.Rd | 132 PlaneGeometry-1.4.0/PlaneGeometry/man/Ellipse.Rd | 126 PlaneGeometry-1.4.0/PlaneGeometry/man/EllipticalArc.Rd | 58 PlaneGeometry-1.4.0/PlaneGeometry/man/Homothety.Rd | 42 PlaneGeometry-1.4.0/PlaneGeometry/man/Inversion.Rd | 66 PlaneGeometry-1.4.0/PlaneGeometry/man/Line.Rd | 102 PlaneGeometry-1.4.0/PlaneGeometry/man/Mobius.Rd | 78 PlaneGeometry-1.4.0/PlaneGeometry/man/Projection.Rd | 42 PlaneGeometry-1.4.0/PlaneGeometry/man/Reflection.Rd | 66 PlaneGeometry-1.4.0/PlaneGeometry/man/Rotation.Rd | 78 PlaneGeometry-1.4.0/PlaneGeometry/man/Scaling.Rd | 42 PlaneGeometry-1.4.0/PlaneGeometry/man/ScalingXY.Rd | 36 PlaneGeometry-1.4.0/PlaneGeometry/man/Shear.Rd | 36 PlaneGeometry-1.4.0/PlaneGeometry/man/Translation.Rd | 66 PlaneGeometry-1.4.0/PlaneGeometry/man/Triangle.Rd | 372 - PlaneGeometry-1.4.0/PlaneGeometry/man/maxAreaInscribedCircle.Rd |only PlaneGeometry-1.4.0/PlaneGeometry/man/maxAreaInscribedEllipse.Rd |only PlaneGeometry-1.4.0/PlaneGeometry/tests/testthat/test-ellipticalArc.R | 2 PlaneGeometry-1.4.0/PlaneGeometry/vignettes/examples.Rmd | 2846 ++++----- 34 files changed, 8123 insertions(+), 7668 deletions(-)
Title: Get Data from the Swiss Statistical Office
Description: Search and download data from the Swiss Federal Statistical Office (BFS) <https://www.bfs.admin.ch/>.
Author: Felix Luginbuhl [aut, cre]
Maintainer: Felix Luginbuhl <felix.luginbuhl@protonmail.ch>
Diff between BFS versions 0.4.6 dated 2023-03-30 and 0.4.7 dated 2023-05-19
DESCRIPTION | 8 - MD5 | 12 +- NAMESPACE | 1 NEWS.md | 4 R/bfs_get_data.R | 2 R/bfs_get_metadata.R |only README.md | 205 ++++++++++++++++++++++-------------------------- man/bfs_get_metadata.Rd |only 8 files changed, 115 insertions(+), 117 deletions(-)
Title: Load Census TIGER/Line Shapefiles
Description: Download TIGER/Line shapefiles from the United States Census Bureau
(<https://www.census.gov/geographies/mapping-files/time-series/geo/tiger-line-file.html>)
and load into R as 'sf' objects.
Author: Kyle Walker [aut, cre],
Bob Rudis [ctb]
Maintainer: Kyle Walker <kyle@walker-data.com>
Diff between tigris versions 2.0.1 dated 2023-01-30 and 2.0.3 dated 2023-05-19
DESCRIPTION | 10 ++++---- MD5 | 46 ++++++++++++++++++++--------------------- R/enumeration_units.R | 23 +++++++++++++++++--- R/fips_codes.R | 4 +-- R/native.R | 4 +-- R/places.R | 25 +--------------------- R/transportation.R | 22 ++++++++++++++++--- data/fips_codes.rda |binary man/append_geoid.Rd | 2 - man/call_geolocator.Rd | 2 - man/call_geolocator_latlon.Rd | 2 - man/county_subdivisions.Rd | 6 ++--- man/fips_codes.Rd | 16 +++++++------- man/load_tiger.Rd | 2 - man/places.Rd | 26 +---------------------- man/primary_roads.Rd | 17 +++++++++++++++ man/primary_secondary_roads.Rd | 25 ++++++++++++++++++---- man/roads.Rd | 25 ++++++++++++++++++---- man/tigris.Rd | 2 - man/tigris_type.Rd | 2 - man/tracts.Rd | 12 +++++++++- man/tribal_block_groups.Rd | 2 - man/tribal_census_tracts.Rd | 2 - man/urban_areas.Rd | 2 - 24 files changed, 164 insertions(+), 115 deletions(-)
Title: Functions for Tidy Analysis and Generation of Random Data
Description: To make it easy to generate random numbers based upon the underlying stats
distribution functions. All data is returned in a tidy and structured
format making working with the data simple and straight forward. Given that the
data is returned in a tidy 'tibble' it lends itself to working with the rest of the
'tidyverse'.
Author: Steven Sanderson [aut, cre, cph]
Maintainer: Steven Sanderson <spsanderson@gmail.com>
Diff between TidyDensity versions 1.2.4 dated 2022-11-16 and 1.2.5 dated 2023-05-19
TidyDensity-1.2.4/TidyDensity/man/figures/tidy_density_logo.png |only TidyDensity-1.2.5/TidyDensity/DESCRIPTION | 18 TidyDensity-1.2.5/TidyDensity/MD5 | 70 TidyDensity-1.2.5/TidyDensity/NAMESPACE | 1 TidyDensity-1.2.5/TidyDensity/NEWS.md | 14 TidyDensity-1.2.5/TidyDensity/R/est-param-burr.R |only TidyDensity-1.2.5/TidyDensity/R/util-distribution-comparison.R | 782 +++++----- TidyDensity-1.2.5/TidyDensity/README.md | 28 TidyDensity-1.2.5/TidyDensity/inst/doc/getting-started.html | 42 TidyDensity-1.2.5/TidyDensity/man/figures/README-more_than_nine_simulations-1.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/README-more_than_nine_simulations-2.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/README-more_than_nine_simulations-3.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/README-more_than_nine_simulations-4.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/README-plot_density-1.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/README-plot_density-2.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/README-plot_density-3.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/README-plot_density-4.png |binary TidyDensity-1.2.5/TidyDensity/man/figures/logo.png |only TidyDensity-1.2.5/TidyDensity/man/tidy_burr.Rd | 3 TidyDensity-1.2.5/TidyDensity/man/tidy_distribution_comparison.Rd | 9 TidyDensity-1.2.5/TidyDensity/man/tidy_inverse_burr.Rd | 3 TidyDensity-1.2.5/TidyDensity/man/util_bernoulli_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_beta_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_binomial_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_burr_param_estimate.Rd |only TidyDensity-1.2.5/TidyDensity/man/util_cauchy_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_exponential_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_gamma_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_geometric_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_hypergeometric_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_logistic_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_lognormal_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_negative_binomial_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_normal_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_pareto_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_poisson_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_uniform_param_estimate.Rd | 1 TidyDensity-1.2.5/TidyDensity/man/util_weibull_param_estimate.Rd | 1 38 files changed, 517 insertions(+), 469 deletions(-)
Title: Load US Census Boundary and Attribute Data as 'tidyverse' and
'sf'-Ready Data Frames
Description: An integrated R interface to several United States Census Bureau
APIs (<https://www.census.gov/data/developers/data-sets.html>) and the US Census Bureau's
geographic boundary files. Allows R users to return Census and ACS data as
tidyverse-ready data frames, and optionally returns a list-column with feature geometry for mapping
and spatial analysis.
Author: Kyle Walker [aut, cre],
Matt Herman [aut],
Kris Eberwein [ctb]
Maintainer: Kyle Walker <kyle@walker-data.com>
Diff between tidycensus versions 1.3.2 dated 2023-01-30 and 1.3.4 dated 2023-05-19
DESCRIPTION | 10 MD5 | 32 +- NAMESPACE | 1 R/acs.R | 23 - R/census.R | 2 R/estimates.R | 678 +++++++++++++++++++++++++++++++++---------------- R/helpers.R | 18 + R/load_data.R | 2 R/pums.R | 5 R/tidycensus-package.R | 2 R/utils.R | 18 + R/zzz.r | 5 README.md | 6 data/fips_codes.rda |binary man/fips_codes.Rd | 2 man/get_decennial.Rd | 2 man/get_estimates.Rd | 32 +- 17 files changed, 570 insertions(+), 268 deletions(-)
Title: Radiomics Image Analysis Toolbox for Medial Images
Description: Radiomics image analysis toolbox for 2D and 3D radiological images. RIA supports DICOM, NIfTI,
nrrd and npy (numpy array) file formats.
RIA calculates first-order, gray level co-occurrence matrix, gray level run length matrix and
geometry-based statistics. Almost all calculations are done using vectorized formulas to
optimize run speeds. Calculation of several thousands of parameters only takes minutes
on a single core of a conventional PC. Detailed methodology has been published: Kolossvary
et al. Circ: Cardiovascular Imaging. 2017;10(12):e006843 <doi: 10.1161/CIRCIMAGING.117.006843>.
Author: Marton Kolossvary [aut, cre]
Maintainer: Marton Kolossvary <marton.kolossvary@gmail.com>
Diff between RIA versions 1.7.0 dated 2023-04-07 and 1.7.1 dated 2023-05-19
DESCRIPTION | 13 ++++++------- MD5 | 4 ++-- README.md | 3 ++- 3 files changed, 10 insertions(+), 10 deletions(-)
Title: Conditional Power Calculations
Description: Functions for calculating the conditional power
for different models in survival time analysis
within randomized clinical trials
with two different treatments to be compared
and survival as an endpoint.
Author: Andreas Kuehnapfel
Maintainer: Andreas Kuehnapfel <andreas.kuehnapfel@imise.uni-leipzig.de>
Diff between CP versions 1.7 dated 2023-05-17 and 1.8 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 5 +++-- data/test.txt |only man/CP-package.Rd | 2 +- 4 files changed, 7 insertions(+), 6 deletions(-)
Title: Visualization and Analysis of Statistical Measures of Confidence
Description: Enables: (1) plotting two-dimensional confidence regions, (2) coverage analysis
of confidence region simulations, (3) calculating confidence intervals and the associated
actual coverage for binomial proportions, and (4) calculating the support values and the
probability mass function of the Kaplan-Meier product-limit estimator. Each is given in
greater detail next.
(1) Plots the two-dimensional confidence region for probability distribution parameters
(supported distribution suffixes: cauchy, gamma, invgauss, logis, llogis, lnorm, norm, unif,
weibull) corresponding to a user-given complete or right-censored dataset and level of
significance. The crplot() algorithm plots more points in areas of greater curvature to
ensure a smooth appearance throughout the confidence region boundary. An alternative
heuristic plots a specified number of points at roughly uniform intervals along its boundary.
Both heuristics build upon the radial profile log-likelihood ratio technique for plotting
confi [...truncated...]
Author: Christopher Weld [aut, cre] ,
Kexin Feng [aut],
Hayeon Park [aut],
Yuxin Qin [aut],
Heather Sasinowska [aut],
Lawrence Leemis [aut],
Yuan Chang [ctb],
Brock Crook [ctb],
Chris Kuebler [ctb],
Andrew Loh [ctb],
Xin Zhang [ctb]
Maintainer: Christopher Weld <ceweld@email.wm.edu>
Diff between conf versions 1.8.0 dated 2023-05-17 and 1.8.1 dated 2023-05-19
DESCRIPTION | 24 ++++++++++++------------ MD5 | 8 ++++---- inst/doc/coversim.html | 4 ++-- inst/doc/crplot.html | 4 ++-- inst/doc/crplot_advanced.html | 4 ++-- 5 files changed, 22 insertions(+), 22 deletions(-)
Title: 'Palantir Foundry' Software Development Kit
Description: Interface to 'Palantir Foundry', including
reading and writing structured or unstructured datasets, and more
<https://www.palantir.com/platforms/foundry/>.
Author: Alexandre Guinaudeau [aut, cre],
Palantir Technologies [aut, cph]
Maintainer: Alexandre Guinaudeau <aguinaudeau@palantir.com>
Diff between foundry versions 0.12.0 dated 2023-02-27 and 0.13.0 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- R/api_client.R | 6 ++++-- R/config.R | 15 +++++++++++++-- R/datasets.R | 2 +- R/datasets_api_client.R | 3 ++- R/utils.R | 5 +++++ README.md | 10 ++++++++-- tests/testthat/test-datasets_api_client.R | 3 ++- 9 files changed, 46 insertions(+), 20 deletions(-)
Title: Joint Clustering and Alignment of Functional Data
Description: Implementations of the k-means, hierarchical agglomerative and
DBSCAN clustering methods for functional data which allows for jointly
aligning and clustering curves. It supports functional data defined on
one-dimensional domains but possibly evaluating in multivariate codomains.
It supports functional data defined in arrays but also via the 'fd' and
'funData' classes for functional data defined in the 'fda' and 'funData'
packages respectively. It currently supports shift, dilation and affine
warping functions for functional data defined on the real line and uses the
SRSF framework to handle boundary-preserving warping for functional data
defined on a specific interval. Main reference for the k-means algorithm:
Sangalli L.M., Secchi P., Vantini S., Vitelli V. (2010) "k-mean alignment
for curve clustering" <doi:10.1016/j.csda.2009.12.008>. Main reference for
the SRSF framework: Tucker, J. D., Wu, W., & Srivastava, A. (2013)
"Generative models for functional data using phase and [...truncated...]
Author: Aymeric Stamm [aut, cre] ,
Laura Sangalli [ctb],
Piercesare Secchi [ctb],
Simone Vantini [ctb],
Valeria Vitelli [ctb],
Alessandro Zito [ctb]
Maintainer: Aymeric Stamm <aymeric.stamm@cnrs.fr>
Diff between fdacluster versions 0.2.0 dated 2023-05-18 and 0.2.1 dated 2023-05-19
DESCRIPTION | 36 ++++++++++++++++++------------------ MD5 | 10 +++++----- NEWS.md | 5 +++++ README.md | 15 ++++++++------- man/fdacluster-package.Rd | 2 +- src/kmaModelClass.cpp | 3 ++- 6 files changed, 39 insertions(+), 32 deletions(-)
Title: Makes it Easier to Work with Daily 'netCDF' from EURO-CORDEX
RCMs
Description: Daily 'netCDF' data from e.g. regional climate models (RCMs) are not trivial
to work with. This package, which relies on 'data.table', makes it easier
to deal with large data from RCMs, such as from EURO-CORDEX
(<https://www.euro-cordex.net/>, <https://cordex.org/data-access/>). It has
functions to extract single grid cells from rotated pole grids as well as
the whole array in long format. Can handle non-standard calendars (360,
noleap) and interpolate them to a standard one. Potentially works with many
CF-conform 'netCDF' files.
Author: Michael Matiu [aut, cre]
Maintainer: Michael Matiu <michaelmatiu@gmail.com>
Diff between eurocordexr versions 0.2.2 dated 2021-08-19 and 0.2.3 dated 2023-05-19
DESCRIPTION | 8 ++-- MD5 | 27 ++++++++-------- NAMESPACE | 2 + NEWS.md | 12 +++++++ R/check_inventory.R | 63 ++++++++++++++++++++++++++----------- R/get_inventory.R | 72 +++++++++++++++++++++++++++++++++++++------ R/get_varnames.R |only R/globals.R | 3 + R/nc_grid_to_dt.R | 69 ++++++++++++++++++++++++++++++++--------- R/rotpole_nc_point_to_dt.R | 16 +++++++++ README.md | 59 +++++++++++++++++++++++++++-------- man/check_inventory.Rd | 11 ++++-- man/get_inventory.Rd | 15 +++----- man/get_varnames.Rd |only man/nc_grid_to_dt.Rd | 28 ++++++++++------ man/print.eurocordexr_inv.Rd |only 16 files changed, 289 insertions(+), 96 deletions(-)
Title: Data from the 'Access to Opportunities Project (AOP)'
Description: Download data from the 'Access to Opportunities Project (AOP)'. The
'aopdata' package brings annual estimates of access to employment,
health, education and social assistance services by transport mode,
as well as data on the spatial distribution of population, jobs,
health care, schools and social assistance facilities at a fine
spatial resolution for all cities included in the project. More
info on the 'AOP' website <https://www.ipea.gov.br/acessooportunidades/en/>.
Author: Rafael H. M. Pereira [aut, cre]
,
Daniel Herszenhut [aut] ,
Marcus Saraiva [aut] ,
Carlos Kaue Vieira Braga [aut]
,
Diego Bogado Tomasiello [ctb],
Joao Bazzo [ctb],
Ipea - Institute for Applied Economic Research [cph, fnd]
Maintainer: Rafael H. M. Pereira <rafa.pereira.br@gmail.com>
Diff between aopdata versions 1.0.1 dated 2022-08-31 and 1.0.2 dated 2023-05-19
DESCRIPTION | 9 +- MD5 | 28 ++++---- NEWS.md | 10 ++ R/download_metadata.R | 2 R/utils.R | 6 - README.md | 4 - build/vignette.rds |binary inst/CITATION | 46 +++++++------ inst/doc/access_inequality.html | 125 ++++++++++++++++++------------------- inst/doc/access_maps.html | 134 +++++++++++++++++++--------------------- inst/doc/data_dic_en.html | 18 ++--- inst/doc/data_dic_pt.html | 18 ++--- inst/doc/intro_to_aopdata.html | 115 +++++++++++++++++----------------- inst/doc/landuse_maps.html | 115 +++++++++++++++++----------------- inst/doc/population_maps.html | 115 +++++++++++++++++----------------- 15 files changed, 375 insertions(+), 370 deletions(-)
Title: Methods for Statistical Disclosure Control in Tabular Data
Description: Methods for statistical disclosure control in
tabular data such as primary and secondary cell suppression as described for example
in Hundepol et al. (2012) <doi:10.1002/9781118348239> are covered in this package.
Author: Bernhard Meindl [aut, cre]
Maintainer: Bernhard Meindl <bernhard.meindl@gmail.com>
Diff between sdcTable versions 0.32.4 dated 2022-09-22 and 0.32.5 dated 2023-05-19
sdcTable-0.32.4/sdcTable/vignettes/sdcTable_cache |only sdcTable-0.32.5/sdcTable/DESCRIPTION | 8 - sdcTable-0.32.5/sdcTable/MD5 | 12 - sdcTable-0.32.5/sdcTable/R/helper_functions.r | 2 sdcTable-0.32.5/sdcTable/build/vignette.rds |binary sdcTable-0.32.5/sdcTable/inst/doc/sdcTable.html | 147 +++++++++++----------- 6 files changed, 85 insertions(+), 84 deletions(-)
Title: Create Pharmacometric Models
Description: Provides a user interface to create or modify pharmacometric
models for various modeling and simulation software platforms.
Author: Sebastien Bihorel [cre, aut]
Maintainer: Sebastien Bihorel <sb.pmlab@gmail.com>
Diff between pmxcode versions 0.1 dated 2023-04-13 and 0.1.1 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 5 +++++ R/utils_common.R | 12 +++++++----- R/utils_nonmem.R | 20 +++++++++++++------- 5 files changed, 32 insertions(+), 19 deletions(-)
Title: Import Data from EDC Software
Description: A convenient toolbox to import data exported from Electronic Data Capture (EDC) software 'TrialMaster' and 'Macro'.
Author: Dan Chaltiel [aut, cre]
Maintainer: Dan Chaltiel <dan.chaltiel@gmail.com>
Diff between EDCimport versions 0.2.1 dated 2022-12-02 and 0.3.0 dated 2023-05-19
EDCimport-0.2.1/EDCimport/R/base_macro.R |only EDCimport-0.3.0/EDCimport/DESCRIPTION | 15 EDCimport-0.3.0/EDCimport/MD5 | 54 +- EDCimport-0.3.0/EDCimport/NAMESPACE | 93 +++ EDCimport-0.3.0/EDCimport/NEWS.md | 27 + EDCimport-0.3.0/EDCimport/R/7zip.R | 6 EDCimport-0.3.0/EDCimport/R/EDCimport-package.R | 37 - EDCimport-0.3.0/EDCimport/R/data.R |only EDCimport-0.3.0/EDCimport/R/helpers.R | 152 +++++ EDCimport-0.3.0/EDCimport/R/sas_format.R | 116 ++-- EDCimport-0.3.0/EDCimport/R/split_mixed.R |only EDCimport-0.3.0/EDCimport/R/swimmerplot.R |only EDCimport-0.3.0/EDCimport/R/todo_base_macro.R |only EDCimport-0.3.0/EDCimport/R/todo_read_all_csv.R |only EDCimport-0.3.0/EDCimport/R/trialmaster.R | 156 ++++-- EDCimport-0.3.0/EDCimport/R/utils.R | 191 ++++--- EDCimport-0.3.0/EDCimport/README.md | 57 +- EDCimport-0.3.0/EDCimport/inst/IMPORTLIST |only EDCimport-0.3.0/EDCimport/inst/WORDLIST | 5 EDCimport-0.3.0/EDCimport/man/data_example.Rd |only EDCimport-0.3.0/EDCimport/man/edc_swimmerplot.Rd |only EDCimport-0.3.0/EDCimport/man/extend_lookup.Rd |only EDCimport-0.3.0/EDCimport/man/get_datasets.Rd |only EDCimport-0.3.0/EDCimport/man/get_key_cols.Rd |only EDCimport-0.3.0/EDCimport/man/read_tm_all_xpt.Rd | 27 - EDCimport-0.3.0/EDCimport/man/read_trialmaster.Rd | 27 - EDCimport-0.3.0/EDCimport/man/reexports.Rd | 4 EDCimport-0.3.0/EDCimport/man/split_mixed_datasets.Rd |only EDCimport-0.3.0/EDCimport/man/unify.Rd |only EDCimport-0.3.0/EDCimport/tests/testthat/_snaps |only EDCimport-0.3.0/EDCimport/tests/testthat/helper-init.R | 199 ++++--- EDCimport-0.3.0/EDCimport/tests/testthat/test-plot.R |only EDCimport-0.3.0/EDCimport/tests/testthat/test-trialmaster.R | 122 ++-- EDCimport-0.3.0/EDCimport/tests/testthat/test-utils.R | 308 +++++++----- 34 files changed, 1089 insertions(+), 507 deletions(-)
Title: Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic
Phenomena
Description: Statistical methods for the modeling and monitoring of time series
of counts, proportions and categorical data, as well as for the modeling
of continuous-time point processes of epidemic phenomena.
The monitoring methods focus on aberration detection in count data time
series from public health surveillance of communicable diseases, but
applications could just as well originate from environmetrics,
reliability engineering, econometrics, or social sciences. The package
implements many typical outbreak detection procedures such as the
(improved) Farrington algorithm, or the negative binomial GLR-CUSUM
method of Hoehle and Paul (2008) <doi:10.1016/j.csda.2008.02.015>.
A novel CUSUM approach combining logistic and multinomial logistic
modeling is also included. The package contains several real-world data
sets, the ability to simulate outbreak data, and to visualize the
results of the monitoring in a temporal, spatial or spatio-temporal
fashion. A recent overview of the available mon [...truncated...]
Author: Michael Hoehle [aut, ths] ,
Sebastian Meyer [aut, cre] ,
Michaela Paul [aut],
Leonhard Held [ctb, ths],
Howard Burkom [ctb],
Thais Correa [ctb],
Mathias Hofmann [ctb],
Christian Lang [ctb],
Juliane Manitz [ctb],
Andrea Riebler [ctb],
Daniel Sabanes B [...truncated...]
Maintainer: Sebastian Meyer <seb.meyer@fau.de>
Diff between surveillance versions 1.21.0 dated 2023-03-15 and 1.21.1 dated 2023-05-19
DESCRIPTION | 140 ++++++++++----------- MD5 | 214 ++++++++++++++++----------------- NEWS.md | 6 R/addSeason2formula.R | 10 - R/algo_hmm.R | 2 R/backprojNP.R | 2 R/calibration.R | 10 - R/calibration_null.R | 10 - R/checkDerivatives.R | 10 - R/epidata.R | 12 - R/epidataCS.R | 10 - R/epidataCS_aggregate.R | 12 - R/epidataCS_animate.R | 10 - R/epidataCS_methods.R | 10 - R/epidataCS_plot.R | 10 - R/epidata_animate.R | 10 - R/epidata_plot.R | 10 - R/gd.R | 2 R/glm_epidataCS.R | 10 - R/gpc.poly-methods.R | 10 - R/graphs.R | 10 - R/hhh4.R | 11 - R/hhh4_W.R | 12 - R/hhh4_W_np.R | 10 - R/hhh4_W_powerlaw.R | 10 - R/hhh4_calibration.R | 10 - R/hhh4_methods.R | 12 - R/hhh4_plot.R | 14 -- R/hhh4_simulate.R | 10 - R/hhh4_simulate_plot.R | 10 - R/hhh4_simulate_scores.R | 10 - R/intersectPolyCircle.R | 11 - R/knox.R | 10 - R/newtonRaphson.R | 10 - R/options.R | 17 +- R/permutationTest.R | 22 +-- R/pit.R | 10 - R/spatial_tools.R | 5 R/stK.R | 26 +--- R/sts_animate.R | 10 - R/stsplot_space.R | 12 - R/stsplot_spacetime.R | 10 - R/stsplot_time.R | 10 - R/twinSIR.R | 10 - R/twinSIR_helper.R | 10 - R/twinSIR_intensity.R | 35 ++--- R/twinSIR_methods.R | 26 +--- R/twinSIR_profile.R | 10 - R/twinSIR_simulation.R | 14 -- R/twinstim.R | 10 - R/twinstim_epitest.R | 10 - R/twinstim_iafplot.R | 22 +-- R/twinstim_intensity.R | 3 R/twinstim_methods.R | 14 -- R/twinstim_siaf.R | 10 - R/twinstim_siaf_gaussian.R | 10 - R/twinstim_siaf_powerlaw.R | 10 - R/twinstim_siaf_powerlaw1.R | 10 - R/twinstim_siaf_powerlawL.R | 10 - R/twinstim_siaf_step.R | 12 - R/twinstim_siaf_student.R | 10 - R/twinstim_simulation.R | 10 - R/twinstim_step.R | 18 +- R/twinstim_tiaf.R | 10 - R/twinstim_tiaf_exponential.R | 10 - R/twinstim_tiaf_step.R | 10 - R/untie.R | 10 - R/zzz.R | 9 - build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 4 inst/doc/glrnb.R | 26 +++- inst/doc/glrnb.Rnw | 22 ++- inst/doc/glrnb.pdf |binary inst/doc/hhh4.R | 34 +++-- inst/doc/hhh4.Rnw | 11 + inst/doc/hhh4.pdf |binary inst/doc/hhh4_spacetime.Rnw | 11 - inst/doc/hhh4_spacetime.pdf |binary inst/doc/monitoringCounts.pdf |binary inst/doc/surveillance.pdf |binary inst/doc/twinSIR.Rnw | 1 inst/doc/twinSIR.pdf |binary inst/doc/twinstim.Rnw | 11 - inst/doc/twinstim.pdf |binary man/algo.hmm.Rd | 11 - man/backprojNP.Rd | 13 -- man/discpoly.Rd | 28 +--- man/epidataCS.Rd | 10 - man/formatDate.Rd | 2 man/hhh4.Rd | 3 man/hhh4_simulate_scores.Rd | 2 man/hhh4_validation.Rd | 3 man/imdepi.Rd | 2 man/imdepifit.Rd | 22 +-- man/intersectPolyCircle.Rd | 2 man/makeControl.Rd | 10 - man/pairedbinCUSUM.Rd | 13 -- man/scores.Rd | 3 man/stsNClist_animate.Rd | 20 +-- man/sts_observation.Rd | 6 man/surveillance-package.Rd | 2 tests/testthat/test-hhh4+derivatives.R | 15 ++ vignettes/glrnb.Rnw | 22 ++- vignettes/hhh4.Rnw | 11 + vignettes/hhh4_spacetime.Rnw | 11 - vignettes/twinSIR.Rnw | 1 vignettes/twinstim.Rnw | 11 - 108 files changed, 676 insertions(+), 762 deletions(-)
Title: Add Continuous Legends to Plots
Description: Annotate plots with legends for continuous variables and colour
spectra using the base graphics plotting tools; and manipulate irregular
polygons.
Author: Martin R. Smith [aut, cre, cph]
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>
Diff between PlotTools versions 0.1.0 dated 2023-04-18 and 0.2.0 dated 2023-05-19
DESCRIPTION | 14 +-- MD5 | 13 ++- NAMESPACE | 4 NEWS.md | 6 + R/PlotTools-package.R |only R/Polygons.R |only README.md | 169 ++++++++++++++++++++--------------------- man/PlotTools-package.Rd |only man/Polygon-Geometry.Rd |only tests/testthat/test-Polygons.R |only 10 files changed, 111 insertions(+), 95 deletions(-)
Title: Nonlinear Nonparametric Statistics
Description: Nonlinear nonparametric statistics using partial moments. Partial moments are the elements of variance and asymptotically approximate the area of f(x). These robust statistics provide the basis for nonlinear analysis while retaining linear equivalences. NNS offers: Numerical integration, Numerical differentiation, Clustering, Correlation, Dependence, Causal analysis, ANOVA, Regression, Classification, Seasonality, Autoregressive modeling, Normalization and Stochastic dominance. All routines based on: Viole, F. and Nawrocki, D. (2013), Nonlinear Nonparametric Statistics: Using Partial Moments (ISBN: 1490523995).
Author: Fred Viole [aut, cre],
Roberto Spadim [ctb]
Maintainer: Fred Viole <ovvo.financial.systems@gmail.com>
Diff between NNS versions 0.9.8 dated 2023-05-17 and 0.9.9 dated 2023-05-19
DESCRIPTION | 8 ++-- MD5 | 38 ++++++++++---------- NAMESPACE | 1 R/ARMA.R | 4 +- R/Multivariate_Regression.R | 21 +++++++---- R/NNS_Distance.R | 5 +- R/Regression.R | 27 +++++--------- R/Stack.R | 8 +++- R/gvload.R | 2 - README.md | 4 +- inst/doc/NNSvignette_Classification.R | 9 ++++ inst/doc/NNSvignette_Classification.Rmd | 9 ++++ inst/doc/NNSvignette_Classification.html | 19 +++++++--- inst/doc/NNSvignette_Clustering_and_Regression.R | 2 - inst/doc/NNSvignette_Clustering_and_Regression.Rmd | 2 - inst/doc/NNSvignette_Clustering_and_Regression.html | 16 ++++---- inst/doc/NNSvignette_Forecasting.html | 2 - vignettes/NNSvignette_Classification.Rmd | 9 ++++ vignettes/NNSvignette_Clustering_and_Regression.Rmd | 2 - vignettes/images/ARMA_ex.png |binary 20 files changed, 116 insertions(+), 72 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-06-20 0.2.1
2019-06-10 0.2
2019-04-26 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-05-16 0.1.4.1
2020-05-31 0.1.4
2019-06-09 0.1.3
2019-01-12 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-01-22 0.4.1
2023-01-13 0.4.0
Title: RDF Library Bindings in R
Description: Provides methods to parse, query and serialize information
stored in the Resource Description Framework (RDF). RDF is described at <https://www.w3.org/TR/rdf-primer/>.
This package supports RDF by implementing an R interface to the Redland RDF C library,
described at <https://librdf.org/docs/api/index.html>. In brief, RDF provides a structured graph
consisting of Statements composed of Subject, Predicate, and Object Nodes.
Author: Matthew B. Jones [aut, cre],
Peter Slaughter [aut],
Jeroen Ooms [aut],
Carl Boettiger [aut],
Scott Chamberlain [aut],
David Beckett [cph],
University of Bristol [cph],
Regents of the University of California [cph]
Maintainer: Matthew B. Jones <jones@nceas.ucsb.edu>
Diff between redland versions 1.0.17-16 dated 2022-01-19 and 1.0.17-16.1 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 4 ++-- src/redland.c | 6 +++--- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: R Interface to DSDP Semidefinite Programming Library
Description: R interface to DSDP semidefinite programming library. The DSDP software is a free open source implementation of an interior-point method for semidefinite programming. It provides primal and dual solutions, exploits low-rank structure and sparsity in the data, and has relatively low memory requirements for an interior-point method.
Author: Zhisu Zhu, Yinyu Ye
Maintainer: Zhisu Zhu <zhuzhisu@alumni.stanford.edu>
Diff between Rdsdp versions 1.0.5.2 dated 2022-05-24 and 1.0.5.2.1 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- src/dsdp/include/dsdp5.h | 2 +- src/dsdp/src/solver/dsdpcops.c | 4 ++-- src/dsdp/src/solver/dsdpsetoptions.c | 2 +- src/dsdp/src/sys/dsdperror.c | 2 +- src/dsdp/src/vecmat/sdpalloc.c | 2 +- src/dsdp/src/vecmat/sdpexit.c | 2 +- 8 files changed, 17 insertions(+), 17 deletions(-)
Title: Partial Least Squares and Principal Component Regression
Description: Multivariate regression methods
Partial Least Squares Regression (PLSR), Principal Component
Regression (PCR) and Canonical Powered Partial Least Squares (CPPLS).
Author: Kristian Hovde Liland [aut, cre],
Bjoern-Helge Mevik [aut],
Ron Wehrens [aut],
Paul Hiemstra [ctb]
Maintainer: Kristian Hovde Liland <kristian.liland@nmbu.no>
Diff between pls versions 2.8-1 dated 2022-07-16 and 2.8-2 dated 2023-05-19
DESCRIPTION | 10 +- MD5 | 14 +-- NAMESPACE | 1 R/summaries.R | 201 +++++++++++++++++++++++++++++++----------------- build/vignette.rds |binary inst/NEWS.Rd | 7 + inst/doc/pls-manual.pdf |binary man/summary.mvr.Rd | 12 ++ 8 files changed, 164 insertions(+), 81 deletions(-)
Title: Apply Photo Editing Effects
Description: You can apply image processing effects that modifies the perceived material properties of objects
in photos, such as gloss, smoothness, and blemishes. This is an implementation of the algorithm proposed by
Boyadzhiev et al. (2015) "Band-Sifting Decomposition for Image Based Material Editing".
Documentation and practical tips of the package is available at <https://github.com/tsuda16k/materialmodifier>.
Author: Hiroyuki Tsuda [aut, cre]
Maintainer: Hiroyuki Tsuda <tsuda16k@gmail.com>
Diff between materialmodifier versions 1.1.0 dated 2021-08-11 and 1.2.0 dated 2023-05-19
DESCRIPTION | 6 MD5 | 24 +-- NEWS.md | 5 R/materialmodifier.R | 133 ++++++++++++++----- README.md | 306 +++++++++++++++++++++++++++++++++++----------- man/get_BS_energy.Rd | 9 + man/gf_decompose.Rd | 13 + man/gf_decompose_parts.Rd | 4 man/gf_decompose_scale.Rd | 6 man/gf_reconstruct.Rd | 5 man/im_save.Rd | 6 man/modif.Rd | 12 + man/modif2.Rd | 21 ++- 13 files changed, 415 insertions(+), 135 deletions(-)
More information about materialmodifier at CRAN
Permanent link
Title: Evolutionary Multiobjective Optimization Algorithms
Description: Collection of building blocks for the design and analysis
of evolutionary multiobjective optimization algorithms.
Author: Olaf Mersmann <olafm@statistik.tu-dortmund.de>
Maintainer: Olaf Mersmann <olafm@statistik.tu-dortmund.de>
Diff between emoa versions 0.5-0.1 dated 2020-03-06 and 0.5-0.2 dated 2023-05-19
DESCRIPTION | 7 +++---- MD5 | 6 +++--- src/utilities.c | 2 +- src/utilities.h | 2 +- 4 files changed, 8 insertions(+), 9 deletions(-)
Title: Cluster Validation Techniques
Description: Package contains most of the popular internal and external
cluster validation methods ready to use for the most of the
outputs produced by functions coming from package "cluster".
Package contains also functions and examples of usage for
cluster stability approach that might be applied to algorithms
implemented in "cluster" package as well as user defined
clustering algorithms.
Author: Lukasz Nieweglowski <wookashn@gmail.com>
Maintainer: Lukasz Nieweglowski <wookashn@gmail.com>
Diff between clv versions 0.3-2.2 dated 2020-03-17 and 0.3-2.3 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 4 ++-- src/optimal_assignment.c | 2 +- 3 files changed, 6 insertions(+), 6 deletions(-)
Title: Efficient Phylogenetics on Large Trees
Description: Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>.
Author: Stilianos Louca
Maintainer: Stilianos Louca <louca.research@gmail.com>
Diff between castor versions 1.7.9 dated 2023-04-18 and 1.7.10 dated 2023-05-19
DESCRIPTION | 10 +++++----- MD5 | 4 ++-- man/mean_abs_change_scalar_OU.Rd | 2 +- 3 files changed, 8 insertions(+), 8 deletions(-)
Title: BiCluster Algorithms
Description: The main function biclust() provides several algorithms to
find biclusters in two-dimensional data: Cheng and Church (2000, ISBN:1-57735-115-0),
spectral (2003) <doi:10.1101/gr.648603>, plaid model (2005) <doi:10.1016/j.csda.2004.02.003>, xmotifs (2003) <doi:10.1142/9789812776303_0008> and bimax (2006) <doi:10.1093/bioinformatics/btl060>. In addition, the
package provides methods for data preprocessing (normalization
and discretisation), visualisation, and validation of bicluster
solutions.
Author: Sebastian Kaiser, Rodrigo Santamaria, Tatsiana Khamiakova,
Martin Sill, Roberto Theron, Luis Quintales, Friedrich
Leisch, Ewoud De Troyer and Sami Leon.
Maintainer: Sebastian Kaiser <dr.sebastian.kaiser@gmail.com>
Diff between biclust versions 2.0.3 dated 2021-05-25 and 2.0.3.1 dated 2023-05-19
DESCRIPTION | 6 +++--- MD5 | 4 ++-- src/rbimax.c | 2 +- 3 files changed, 6 insertions(+), 6 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-03-10 1.0-2
2021-12-17 1.0-1
2021-12-06 1.0-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-09-20 1.0-3
2017-09-07 1.0-2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-03-13 2.0
2018-03-01 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-01-27 1.1-1
2020-08-25 1.1-0
2019-11-05 1.0-5
2018-05-25 1.0-4
2018-04-12 1.0-3
2017-06-07 1.0-1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-01-30 2.1-4
2022-05-05 2.1-3
2020-08-26 2.1-1
2020-08-04 2.1-0
2019-11-03 2.0-4
2019-01-27 2.0-3
2018-04-06 2.0-2
2017-05-19 2.0-1
2017-04-20 1.0-7
2016-10-17 1.0-6
2016-10-11 1.0-5.1
2016-10-05 1.0-5
2016-03-24 1.0-4
2015-06-18 1.0-3
2015-04-29 1.0-2
2015-03-04 1.0-1
2015-02-16 1.0
Title: Evaluate Clinical Prediction Models by Net Monetary Benefit
Description: Estimates when and where a model-guided treatment strategy may
outperform a treat-all or treat-none approach by Monte Carlo simulation and
evaluation of the Net Monetary Benefit. Details can be viewed in
Parsons et al. (2023) <doi:10.21105/joss.05328>.
Author: Rex Parsons [aut, cre] ,
Robin Blythe [aut] ,
Adrian Barnett [aut] ,
Emi Tanaka [rev] ,
Tinula Kariyawasam [rev] ,
Susanna Cramb [ctb] ,
Steven McPhail [ctb]
Maintainer: Rex Parsons <rex.parsons94@gmail.com>
Diff between predictNMB versions 0.1.0 dated 2023-04-12 and 0.2.0 dated 2023-05-19
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Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-09-13 2.1
2016-12-30 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-11-05 0.0.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-05-05 1.4.1.1
2016-04-29 1.4.1
2016-04-18 1.4
2015-04-28 1.2.5
2014-04-29 1.2.4
2013-10-28 1.2.3
2013-09-29 1.2.2
2013-09-28 1.2.1
2013-07-12 1.2
2013-06-19 1.1
2013-05-30 1.0
2013-03-13 0.9
2013-03-12 0.8
Title: Spatially Explicit Capture-Recapture for Linear Habitats
Description: Tools for spatially explicit capture-recapture analysis of animal populations in linear habitats, extending package 'secr'.
Author: Murray Efford
Maintainer: Murray Efford <murray.efford@otago.ac.nz>
Diff between secrlinear versions 1.1.4 dated 2021-05-04 and 1.2.1 dated 2023-05-19
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