Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-14 0.2.0
2023-06-14 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-10 0.2.5
2023-03-03 0.2.4
2021-12-14 0.2.3
2021-03-03 0.2.1
2019-12-13 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-04-02 0.7.4
2023-03-14 0.7.2
2023-02-23 0.7.0
Title: Maps of Peru
Description: Information of the centroids and geographical limits of the regions, departments, provinces and districts of Peru.
Author: Jorge L. C. Musaja [aut, cre]
Maintainer: Jorge L. C. Musaja <musajajorge@gmail.com>
Diff between mapsPERU versions 1.0.2 dated 2021-12-03 and 2.0.0 dated 2023-08-14
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- R/map_DIST.R | 34 ++++++++++++++++++---------------- data/map_DEP.rda |binary data/map_DIST.rda |binary data/map_PROV.rda |binary data/map_REG.rda |binary man/map_DIST.Rd | 2 ++ 8 files changed, 31 insertions(+), 27 deletions(-)
Title: Extra Recipes Steps for Dealing with Unbalanced Data
Description: A dataset with an uneven number of cases in each class is
said to be unbalanced. Many models produce a subpar performance on
unbalanced datasets. A dataset can be balanced by increasing the
number of minority cases using SMOTE 2011 <arXiv:1106.1813>,
BorderlineSMOTE 2005 <doi:10.1007/11538059_91> and ADASYN 2008
<https://ieeexplore.ieee.org/document/4633969>. Or by decreasing the
number of majority cases using NearMiss 2003
<https://www.site.uottawa.ca/~nat/Workshop2003/jzhang.pdf> or Tomek
link removal 1976 <https://ieeexplore.ieee.org/document/4309452>.
Author: Emil Hvitfeldt [aut, cre] ,
Posit Software, PBC [cph, fnd]
Maintainer: Emil Hvitfeldt <emil.hvitfeldt@posit.co>
Diff between themis versions 1.0.1 dated 2023-04-14 and 1.0.2 dated 2023-08-14
themis-1.0.1/themis/R/step_adasyn.R |only themis-1.0.1/themis/R/step_bsmote.R |only themis-1.0.1/themis/R/step_downsample.R |only themis-1.0.1/themis/R/step_nearmiss.R |only themis-1.0.1/themis/R/step_rose.R |only themis-1.0.1/themis/R/step_smote.R |only themis-1.0.1/themis/R/step_smotenc.R |only themis-1.0.1/themis/R/step_tomek.R |only themis-1.0.1/themis/R/step_upsample.R |only themis-1.0.1/themis/tests/testthat/_snaps/step_adasyn.md |only themis-1.0.1/themis/tests/testthat/_snaps/step_bsmote.md |only themis-1.0.1/themis/tests/testthat/_snaps/step_downsample.md |only themis-1.0.1/themis/tests/testthat/_snaps/step_nearmiss.md |only themis-1.0.1/themis/tests/testthat/_snaps/step_rose.md |only themis-1.0.1/themis/tests/testthat/_snaps/step_smote.md |only themis-1.0.1/themis/tests/testthat/_snaps/step_tomek.md |only themis-1.0.1/themis/tests/testthat/_snaps/step_upsample.md |only themis-1.0.1/themis/tests/testthat/test-step_adasyn.R |only themis-1.0.1/themis/tests/testthat/test-step_bsmote.R |only themis-1.0.1/themis/tests/testthat/test-step_downsample.R |only themis-1.0.1/themis/tests/testthat/test-step_nearmiss.R |only themis-1.0.1/themis/tests/testthat/test-step_rose.R |only themis-1.0.1/themis/tests/testthat/test-step_smote.R |only themis-1.0.1/themis/tests/testthat/test-step_tomek.R |only themis-1.0.1/themis/tests/testthat/test-step_upsample.R |only themis-1.0.2/themis/DESCRIPTION | 10 themis-1.0.2/themis/MD5 | 92 ++++---- themis-1.0.2/themis/NAMESPACE | 2 themis-1.0.2/themis/NEWS.md | 6 themis-1.0.2/themis/R/adasyn.R |only themis-1.0.2/themis/R/bsmote.R |only themis-1.0.2/themis/R/downsample.R |only themis-1.0.2/themis/R/misc.R | 2 themis-1.0.2/themis/R/nearmiss.R |only themis-1.0.2/themis/R/rose.R |only themis-1.0.2/themis/R/smote.R |only themis-1.0.2/themis/R/smotenc.R |only themis-1.0.2/themis/R/smotenc_impl.R | 2 themis-1.0.2/themis/R/themis-package.R | 2 themis-1.0.2/themis/R/tomek.R |only themis-1.0.2/themis/R/upsample.R |only themis-1.0.2/themis/build/partial.rdb |binary themis-1.0.2/themis/man/required_pkgs.step.Rd | 5 themis-1.0.2/themis/man/step_adasyn.Rd | 6 themis-1.0.2/themis/man/step_bsmote.Rd | 8 themis-1.0.2/themis/man/step_downsample.Rd | 8 themis-1.0.2/themis/man/step_nearmiss.Rd | 9 themis-1.0.2/themis/man/step_rose.Rd | 8 themis-1.0.2/themis/man/step_smote.Rd | 7 themis-1.0.2/themis/man/step_smotenc.Rd | 4 themis-1.0.2/themis/man/step_tomek.Rd | 6 themis-1.0.2/themis/man/step_upsample.Rd | 8 themis-1.0.2/themis/man/tidy.recipe.Rd | 8 themis-1.0.2/themis/man/tunable_themis.Rd | 7 themis-1.0.2/themis/tests/testthat/_snaps/adasyn.md |only themis-1.0.2/themis/tests/testthat/_snaps/bsmote.md |only themis-1.0.2/themis/tests/testthat/_snaps/downsample.md |only themis-1.0.2/themis/tests/testthat/_snaps/nearmiss.md |only themis-1.0.2/themis/tests/testthat/_snaps/rose.md |only themis-1.0.2/themis/tests/testthat/_snaps/smote.md |only themis-1.0.2/themis/tests/testthat/_snaps/smotenc.md | 40 +-- themis-1.0.2/themis/tests/testthat/_snaps/tomek.md |only themis-1.0.2/themis/tests/testthat/_snaps/upsample.md |only themis-1.0.2/themis/tests/testthat/test-adasyn.R |only themis-1.0.2/themis/tests/testthat/test-bsmote.R |only themis-1.0.2/themis/tests/testthat/test-downsample.R |only themis-1.0.2/themis/tests/testthat/test-nearmiss.R |only themis-1.0.2/themis/tests/testthat/test-rose.R |only themis-1.0.2/themis/tests/testthat/test-smote.R |only themis-1.0.2/themis/tests/testthat/test-smotenc.R | 119 +++++------ themis-1.0.2/themis/tests/testthat/test-tomek.R |only themis-1.0.2/themis/tests/testthat/test-upsample.R |only 72 files changed, 180 insertions(+), 179 deletions(-)
Title: Version, Share, Deploy, and Monitor Models
Description: The goal of 'vetiver' is to provide fluent tooling to
version, share, deploy, and monitor a trained model. Functions handle
both recording and checking the model's input data prototype, and
predicting from a remote API endpoint. The 'vetiver' package is
extensible, with generics that can support many kinds of models.
Author: Julia Silge [cre, aut] ,
Posit Software, PBC [cph, fnd]
Maintainer: Julia Silge <julia.silge@posit.co>
Diff between vetiver versions 0.2.2 dated 2023-07-03 and 0.2.3 dated 2023-08-14
DESCRIPTION | 6 +++--- MD5 | 18 +++++++++--------- NEWS.md | 4 ++++ R/rsconnect.R | 6 +++++- inst/doc/vetiver.html | 10 +++++----- man/vetiver_deploy_rsconnect.Rd | 2 +- tests/testthat/setup.R | 33 ++++++++++++++++++++++----------- tests/testthat/test-pin-read-write.R | 11 ++++++++++- tests/testthat/test-rsconnect.R | 1 + tests/testthat/test-xgboost.R | 6 ++++-- 10 files changed, 64 insertions(+), 33 deletions(-)
Title: Paleoecology Functions for Regime Shift Analysis
Description: Contains a variety of functions, based around
regime shift analysis of paleoecological data.
Citations:
Rodionov() from Rodionov (2004) <doi:10.1029/2004GL019448>
Lanzante() from Lanzante (1996) <doi:10.1002/(SICI)1097-0088(199611)16:11%3C1197::AID-JOC89%3E3.0.CO;2-L>
Hellinger_trans from Numerical Ecology, Legendre & Legendre (ISBN 9780444538680)
rolling_autoc from Liu, Gao & Wang (2018) <doi:10.1016/j.scitotenv.2018.06.276>
Sample data sets lake_data & lake_RSI processed from Bush, Silman & Urrego (2004) <doi:10.1126/science.1090795>.
Author: Alex H. Room [aut, cre, cph] ,
Felipe Franco-Gaviria [ctb, fnd]
,
Dunia H. Urrego [ctb, fnd] ,
The authors of the dependency Rust crates [ctb]
Maintainer: Alex H. Room <alex.room@btinternet.com>
Diff between rshift versions 2.2.0 dated 2023-01-06 and 2.2.1 dated 2023-08-14
DESCRIPTION | 25 +++++++++++++++---------- LICENSE.note |only MD5 | 21 +++++++++++++-------- build/vignette.rds |binary inst/AUTHORS |only inst/doc/STARSmanual.ltx | 8 ++++---- inst/doc/STARSmanual.pdf |binary src/Makevars | 12 ++++-------- src/Makevars.win | 8 ++++++-- src/rust/Cargo.toml | 4 ++-- src/rust/cargo_vendor_config.toml |only src/rust/rstudio |only src/rust/vendor.sh |only src/rust/vendor.tar.xz |only vignettes/STARSmanual.ltx | 8 ++++---- 15 files changed, 48 insertions(+), 38 deletions(-)
Title: More Data Sets Useful for Modeling Examples
Description: More data sets used for demonstrating or testing
model-related packages are contained in this package.
Author: Emil Hvitfeldt [aut, cre] ,
Posit Software, PBC [cph, fnd]
Maintainer: Emil Hvitfeldt <emil.hvitfeldt@posit.co>
Diff between modeldatatoo versions 0.1.0 dated 2023-06-14 and 0.2.0 dated 2023-08-14
modeldatatoo-0.1.0/modeldatatoo/R/ames.R |only modeldatatoo-0.1.0/modeldatatoo/man/data_ames.Rd |only modeldatatoo-0.2.0/modeldatatoo/DESCRIPTION | 8 +- modeldatatoo-0.2.0/modeldatatoo/MD5 | 36 +++++----- modeldatatoo-0.2.0/modeldatatoo/NAMESPACE | 4 - modeldatatoo-0.2.0/modeldatatoo/NEWS.md | 16 ++++ modeldatatoo-0.2.0/modeldatatoo/R/aaa-board.R | 8 +- modeldatatoo-0.2.0/modeldatatoo/R/animals.R | 4 - modeldatatoo-0.2.0/modeldatatoo/R/chimiometrie_2019.R | 2 modeldatatoo-0.2.0/modeldatatoo/R/elevators.R | 2 modeldatatoo-0.2.0/modeldatatoo/R/hotel_rates.R |only modeldatatoo-0.2.0/modeldatatoo/R/modeldatatoo_board.R | 2 modeldatatoo-0.2.0/modeldatatoo/R/pharma_bioreactors.R |only modeldatatoo-0.2.0/modeldatatoo/R/small_fine_foods.R | 2 modeldatatoo-0.2.0/modeldatatoo/R/taxi.R |only modeldatatoo-0.2.0/modeldatatoo/build/partial.rdb |binary modeldatatoo-0.2.0/modeldatatoo/inst/template-r-file | 2 modeldatatoo-0.2.0/modeldatatoo/inst/template-r-file-collection | 2 modeldatatoo-0.2.0/modeldatatoo/man/data_animals.Rd | 2 modeldatatoo-0.2.0/modeldatatoo/man/data_hotel_rates.Rd |only modeldatatoo-0.2.0/modeldatatoo/man/data_pharma_bioreactors.Rd |only modeldatatoo-0.2.0/modeldatatoo/man/data_taxi.Rd |only modeldatatoo-0.2.0/modeldatatoo/man/modeldatatoo-package.Rd | 2 23 files changed, 57 insertions(+), 35 deletions(-)
Title: Estimating Public and Private Sector Contraceptive Market Supply
Shares
Description: Family Planning programs and initiatives typically use nationally representative surveys to estimate key indicators of a country’s family planning progress. However, in recent years, routinely collected family planning services data (Service Statistics) have been used as a supplementary data source to bridge gaps in the surveys. The use of service statistics comes with the caveat that adjustments need to be made for missing private sector contributions to the contraceptive method supply chain. Evaluating the supply source of modern contraceptives often relies on Demographic Health Surveys (DHS), where many countries do not have recent data beyond 2015/16. Fortunately, in the absence of recent surveys we can rely on statistical model-based estimates and projections to fill the knowledge gap. We present a Bayesian, hierarchical, penalized-spline model with multivariate-normal spline coefficients, to account for across method correlations, to produce country-specific,annual estimates for [...truncated...]
Author: Hannah Comiskey [aut, cre],
Niamh Cahill [aut],
Leontine Alkema [aut]
Maintainer: Hannah Comiskey <hannah.comiskey.2015@mumail.ie>
Diff between mcmsupply versions 0.1.1 dated 2023-07-11 and 0.2.2 dated 2023-08-14
mcmsupply-0.1.1/mcmsupply/R/Bspline_sigma_matrix_median.R |only mcmsupply-0.1.1/mcmsupply/R/estimated_global_subnational_correlations.R |only mcmsupply-0.1.1/mcmsupply/R/estimated_national_correlations.R |only mcmsupply-0.1.1/mcmsupply/R/inv_sigma_delta_hat_subnationalmod.R |only mcmsupply-0.1.1/mcmsupply/R/median_alpha_region_intercepts.R |only mcmsupply-0.1.1/mcmsupply/R/median_alphacms.R |only mcmsupply-0.1.1/mcmsupply/R/precision_alpha_country_intercepts.R |only mcmsupply-0.1.1/mcmsupply/R/tau_alphapms_subnationalmod.R |only mcmsupply-0.1.1/mcmsupply/R/trunc_national_FPsource_data.R |only mcmsupply-0.1.1/mcmsupply/R/trunc_subnat_FPsource_data.R |only mcmsupply-0.1.1/mcmsupply/data/estimated_global_subnational_correlations.rda |only mcmsupply-0.1.1/mcmsupply/data/estimated_national_correlations.rda |only mcmsupply-0.1.1/mcmsupply/data/inv.sigma_delta_hat_subnationalmod.rda |only mcmsupply-0.1.1/mcmsupply/data/median_alphacms_subnationalmod.rda |only mcmsupply-0.1.1/mcmsupply/data/median_alpharms_nationalmod.rda |only mcmsupply-0.1.1/mcmsupply/data/sigma_matrix_nationalmod.rda |only mcmsupply-0.1.1/mcmsupply/data/tau_alphacms_nationalmod.rda |only mcmsupply-0.1.1/mcmsupply/data/tau_alphapms_subnationalmod.rda |only mcmsupply-0.1.1/mcmsupply/data/trunc_national_FPsource_data.rda |only mcmsupply-0.1.1/mcmsupply/data/trunc_subnat_FPsource_data.rda |only mcmsupply-0.1.1/mcmsupply/inst/data-raw/get_global_provincial_neighboursmatrix.R |only mcmsupply-0.1.1/mcmsupply/inst/data-raw/truncated_national_FPsource_data.R |only mcmsupply-0.1.1/mcmsupply/inst/data-raw/truncated_subnat_FPsource_data.R |only mcmsupply-0.1.1/mcmsupply/man/Bspline_sigma_matrix_median.Rd |only mcmsupply-0.1.1/mcmsupply/man/estimated_global_subnational_correlations.Rd |only mcmsupply-0.1.1/mcmsupply/man/estimated_national_correlations.Rd |only mcmsupply-0.1.1/mcmsupply/man/inv.sigma_delta_hat_subnationalmod.Rd |only mcmsupply-0.1.1/mcmsupply/man/median_alpha_region_intercepts.Rd |only mcmsupply-0.1.1/mcmsupply/man/median_alphacms.Rd |only mcmsupply-0.1.1/mcmsupply/man/precision_alpha_country_intercepts.Rd |only mcmsupply-0.1.1/mcmsupply/man/tau_alphapms_subnationalmod.Rd |only mcmsupply-0.1.1/mcmsupply/man/trunc_national_FPsource_data.Rd |only mcmsupply-0.1.1/mcmsupply/man/trunc_subnat_FPsource_data.Rd |only mcmsupply-0.2.2/mcmsupply/DESCRIPTION | 6 mcmsupply-0.2.2/mcmsupply/MD5 | 124 mcmsupply-0.2.2/mcmsupply/NEWS.md | 12 mcmsupply-0.2.2/mcmsupply/R/Country_and_area_classification.R | 5 mcmsupply-0.2.2/mcmsupply/R/DEFT_DHS_database.R |only mcmsupply-0.2.2/mcmsupply/R/estimated_national_correlations_logitnormal.R |only mcmsupply-0.2.2/mcmsupply/R/get_data.R | 10 mcmsupply-0.2.2/mcmsupply/R/internal_functions.R | 630 mcmsupply-0.2.2/mcmsupply/R/mcmsupply.R | 6 mcmsupply-0.2.2/mcmsupply/R/national_sigma_delta_hat_logitnormal.R |only mcmsupply-0.2.2/mcmsupply/R/national_tau_alpha_cms_hat_logitnormal.R |only mcmsupply-0.2.2/mcmsupply/R/national_theta_rms_hat_logitnormal.R |only mcmsupply-0.2.2/mcmsupply/R/subnational_alpha_cms_hat.R |only mcmsupply-0.2.2/mcmsupply/R/subnational_estimated_correlations.R |only mcmsupply-0.2.2/mcmsupply/R/subnational_inv.sigma_delta_hat.R |only mcmsupply-0.2.2/mcmsupply/R/subnational_tau_alpha_pms_hat.R |only mcmsupply-0.2.2/mcmsupply/build/vignette.rds |binary mcmsupply-0.2.2/mcmsupply/data/DEFT_DHS_database.rda |only mcmsupply-0.2.2/mcmsupply/data/national_estimated_correlations_logitnormal.rda |only mcmsupply-0.2.2/mcmsupply/data/national_sigma_delta_hat_logitnormal.rda |only mcmsupply-0.2.2/mcmsupply/data/national_tau_alpha_cms_hat_logitnormal.rda |only mcmsupply-0.2.2/mcmsupply/data/national_theta_rms_hat_logitnormal.rda |only mcmsupply-0.2.2/mcmsupply/data/subnational_alpha_cms_hat.rda |only mcmsupply-0.2.2/mcmsupply/data/subnational_estimated_correlations.rda |only mcmsupply-0.2.2/mcmsupply/data/subnational_inv.sigma_delta_hat.rda |only mcmsupply-0.2.2/mcmsupply/data/subnational_tau_alpha_pms_hat.rda |only mcmsupply-0.2.2/mcmsupply/inst/data-raw/DEFT_DHS_database.R |only mcmsupply-0.2.2/mcmsupply/inst/data-raw/DEFT_DHS_database.xlsx |only mcmsupply-0.2.2/mcmsupply/inst/data-raw/get_nationalFPsource_from_microdata.R |only mcmsupply-0.2.2/mcmsupply/inst/data-raw/get_subnatFPsource_from_microdata.R |only mcmsupply-0.2.2/mcmsupply/inst/data-raw/my_custom_data_bad.xlsx |only mcmsupply-0.2.2/mcmsupply/inst/data-raw/my_custom_data_good.xlsx |only mcmsupply-0.2.2/mcmsupply/inst/doc/local_national_mod.R | 2 mcmsupply-0.2.2/mcmsupply/inst/doc/local_national_mod.Rmd | 4 mcmsupply-0.2.2/mcmsupply/inst/doc/local_national_mod.html | 2 mcmsupply-0.2.2/mcmsupply/inst/doc/package_data.R | 29 mcmsupply-0.2.2/mcmsupply/inst/doc/package_data.Rmd | 76 mcmsupply-0.2.2/mcmsupply/inst/doc/package_data.html |38519 ---------- mcmsupply-0.2.2/mcmsupply/inst/doc/subnational_local_customdata_models.R | 11 mcmsupply-0.2.2/mcmsupply/inst/doc/subnational_local_customdata_models.Rmd | 16 mcmsupply-0.2.2/mcmsupply/inst/doc/subnational_local_customdata_models.html | 34 mcmsupply-0.2.2/mcmsupply/inst/doc/subnational_local_models.Rmd | 2 mcmsupply-0.2.2/mcmsupply/inst/doc/subnational_multinational_models.Rmd | 2 mcmsupply-0.2.2/mcmsupply/inst/model/global_national_model.jags | 38 mcmsupply-0.2.2/mcmsupply/inst/model/local_national_model.jags | 2 mcmsupply-0.2.2/mcmsupply/inst/model/multicountry_national_logit_normal_model.jags |only mcmsupply-0.2.2/mcmsupply/inst/model/multicountry_subnational_logit_normal_model.jags |only mcmsupply-0.2.2/mcmsupply/inst/model/singlecountry_national_logitnormal_model.jags |only mcmsupply-0.2.2/mcmsupply/inst/model/singlecountry_subnational_logitnormal_model.jags |only mcmsupply-0.2.2/mcmsupply/man/Country_and_area_classification.Rd | 8 mcmsupply-0.2.2/mcmsupply/man/DEFT_DHS_database.Rd |only mcmsupply-0.2.2/mcmsupply/man/get_data.Rd | 8 mcmsupply-0.2.2/mcmsupply/man/national_estimated_correlations_logitnormal.Rd |only mcmsupply-0.2.2/mcmsupply/man/national_sigma_delta_hat_logitnormal.Rd |only mcmsupply-0.2.2/mcmsupply/man/national_tau_alpha_cms_hat_logitnormal.Rd |only mcmsupply-0.2.2/mcmsupply/man/national_theta_rms_hat_logitnormal.Rd |only mcmsupply-0.2.2/mcmsupply/man/subnational_alpha_cms_hat.Rd |only mcmsupply-0.2.2/mcmsupply/man/subnational_estimated_correlations.Rd |only mcmsupply-0.2.2/mcmsupply/man/subnational_inv.sigma_delta_hat.Rd |only mcmsupply-0.2.2/mcmsupply/man/subnational_tau_alpha_pms_hat.Rd |only mcmsupply-0.2.2/mcmsupply/vignettes/local_national_mod.Rmd | 4 mcmsupply-0.2.2/mcmsupply/vignettes/package_data.Rmd | 76 mcmsupply-0.2.2/mcmsupply/vignettes/subnational_local_customdata_models.Rmd | 16 mcmsupply-0.2.2/mcmsupply/vignettes/subnational_local_models.Rmd | 2 mcmsupply-0.2.2/mcmsupply/vignettes/subnational_multinational_models.Rmd | 2 98 files changed, 643 insertions(+), 39003 deletions(-)
Title: Analysis of Music and Speech
Description: Analyze music and speech, extract features like MFCCs, handle wave files and their representation in various ways, read mp3, read midi, perform steps of a transcription, ...
Also contains functions ported from the 'rastamat' 'Matlab' package.
Author: Uwe Ligges [aut, cre, cph] ,
Sebastian Krey [aut, cph],
Olaf Mersmann [aut, cph],
Sarah Schnackenberg [aut, cph],
Guillaume Guenard [aut, cph] ,
Daniel P. W. Ellis [aut, cph] ,
Underbit Technologies [aut, cph] ,
Andrea Preusser [ctb],
Anita Thieler [ [...truncated...]
Maintainer: Uwe Ligges <ligges@statistik.tu-dortmund.de>
Diff between tuneR versions 1.4.4 dated 2023-05-11 and 1.4.5 dated 2023-08-14
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/Waveforms.R | 12 +++++------- 3 files changed, 11 insertions(+), 13 deletions(-)
Title: Maximum Likelihood Estimation and Likelihood Ratio Test
Functions for Separable Variance-Covariance Structures
Description: Maximum likelihood estimation of the parameters
of matrix and 3rd-order tensor normal distributions with unstructured
factor variance covariance matrices, two procedures, and for unbiased
modified likelihood ratio testing of simple and double separability
for variance-covariance structures, two procedures. References:
Dutilleul P. (1999) <doi:10.1080/00949659908811970>,
Manceur AM, Dutilleul P. (2013)
<doi:10.1016/j.cam.2012.09.017>, and Manceur AM, Dutilleul
P. (2013) <doi:10.1016/j.spl.2012.10.020>.
Author: Ameur Manceur [aut],
Timothy Schwinghamer [aut, cre],
Pierre Dutilleul [aut, cph]
Maintainer: Timothy Schwinghamer <timothy.schwinghamer@AGR.GC.CA>
Diff between sEparaTe versions 0.3.0 dated 2021-06-27 and 0.3.1 dated 2023-08-14
sEparaTe-0.3.0/sEparaTe/data/data2d.RData |only sEparaTe-0.3.0/sEparaTe/data/data3d.RData |only sEparaTe-0.3.1/sEparaTe/DESCRIPTION | 17 +++-- sEparaTe-0.3.1/sEparaTe/LICENSE | 4 - sEparaTe-0.3.1/sEparaTe/MD5 | 28 ++++----- sEparaTe-0.3.1/sEparaTe/R/data3d.R | 32 +++++----- sEparaTe-0.3.1/sEparaTe/R/lrt2d_svc.R | 60 +++++++++---------- sEparaTe-0.3.1/sEparaTe/R/lrt3d_svc.R | 71 ++++++++++++----------- sEparaTe-0.3.1/sEparaTe/R/mle2d_svc.R | 64 +++++++++----------- sEparaTe-0.3.1/sEparaTe/R/mle3d_svc.R | 63 ++++++++++---------- sEparaTe-0.3.1/sEparaTe/R/sEparaTe.R | 92 +++++++++++++++--------------- sEparaTe-0.3.1/sEparaTe/data/data2d.rda |only sEparaTe-0.3.1/sEparaTe/data/data3d.rda |only sEparaTe-0.3.1/sEparaTe/man/lrt2d_svc.Rd | 20 ++++-- sEparaTe-0.3.1/sEparaTe/man/lrt3d_svc.Rd | 26 +++++--- sEparaTe-0.3.1/sEparaTe/man/mle2d_svc.Rd | 18 +++-- sEparaTe-0.3.1/sEparaTe/man/mle3d_svc.Rd | 24 +++++-- 17 files changed, 273 insertions(+), 246 deletions(-)
Title: 'rquery' for 'data.table'
Description: Implements the 'rquery' piped Codd-style query algebra using 'data.table'. This allows
for a high-speed in memory implementation of Codd-style data manipulation tools.
Author: John Mount [aut, cre],
Win-Vector LLC [cph]
Maintainer: John Mount <jmount@win-vector.com>
Diff between rqdatatable versions 1.3.1 dated 2022-01-22 and 1.3.2 dated 2023-08-14
DESCRIPTION | 12 - MD5 | 16 - NEWS.md | 4 R/zzz.R | 6 README.md | 42 ++-- build/vignette.rds |binary inst/doc/GroupedSampling.html | 413 +++++++++++++++++++++++++++++++----------- inst/doc/R_mapping.html | 403 +++++++++++++++++++++++++++++++--------- inst/doc/logisticexample.html | 397 ++++++++++++++++++++++++++++++---------- 9 files changed, 965 insertions(+), 328 deletions(-)
Title: High Performance Tools for Combinatorics and Computational
Mathematics
Description: Provides optimized functions and flexible combinatorial iterators
implemented in C++ for solving problems in combinatorics and
computational mathematics. Utilizes the RMatrix class from 'RcppParallel'
for thread safety. There are combination/permutation functions with
constraint parameters that allow for generation of all results of a vector
meeting specific criteria (e.g. generating integer partitions/compositions
or finding all combinations such that the sum is between two bounds).
Capable of generating specific combinations/permutations (e.g. retrieve
only the nth lexicographical result) which sets up nicely for
parallelization as well as random sampling. Gmp support permits exploration
where the total number of results is large (e.g. comboSample(10000, 500,
n = 4)). Additionally, there are several high performance number theoretic
functions that are useful for problems common in computational mathematics.
Some of these functions make use of the fast integer division library
'libdiv [...truncated...]
Author: Joseph Wood
Maintainer: Joseph Wood <jwood000@gmail.com>
Diff between RcppAlgos versions 2.8.0 dated 2023-07-10 and 2.8.1 dated 2023-08-14
DESCRIPTION | 6 +- MD5 | 48 ++++++++--------- NEWS.md | 8 ++ inst/NEWS.Rd | 12 ++++ inst/include/Constraints/ConstraintsClass.h | 7 ++ src/CnstrntsToRClass.cpp | 13 ++-- src/ComboGroupClass.cpp | 2 src/ComboGroupGeneral.cpp | 2 src/ComboGroupSame.cpp | 2 src/ComboGroupUnique.cpp | 2 src/ConstraintsClass.cpp | 74 +++++++++++++++------------ src/ConstraintsDistinct.cpp | 10 +-- src/ConstraintsMultiset.cpp | 10 +-- src/ConstraintsRep.cpp | 10 +-- src/ConvertUtils.cpp | 8 +- src/ExposeClass.cpp | 1 src/GetConstraints.cpp | 10 ++- src/GmpConvert.cpp | 4 - src/GroupClass.cpp | 2 src/PartitionsEsqueDistinct.cpp | 20 +++---- src/PartitionsEsqueMultiset.cpp | 20 +++---- src/PartitionsEsqueRep.cpp | 22 ++++---- src/PollardRhoUtils.cpp | 2 src/StdConvert.cpp | 4 - tests/testthat/testConstraintsClass.R | 75 +++++++++++++++++++--------- 25 files changed, 221 insertions(+), 153 deletions(-)
Title: Colour Palettes Based on the Scientific Colour-Maps
Description: Colour choice in information visualisation is important in order to
avoid being mislead by inherent bias in the used colour palette. The 'scico'
package provides access to the perceptually uniform and colour-blindness
friendly palettes developed by Fabio Crameri and released under the
"Scientific Colour-Maps" moniker. The package contains 24 different palettes
and includes both diverging and sequential types.
Author: Thomas Lin Pedersen [aut, cre]
,
Fabio Crameri [aut]
Maintainer: Thomas Lin Pedersen <thomasp85@gmail.com>
Diff between scico versions 1.4.0 dated 2023-05-30 and 1.5.0 dated 2023-08-14
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 4 ++++ R/sysdata.rda |binary README.md | 22 +++++++++++----------- man/figures/README-unnamed-chunk-3-1.png |binary man/figures/README-unnamed-chunk-5-1.png |binary 7 files changed, 24 insertions(+), 20 deletions(-)
Title: The Composer of Plots
Description: The 'ggplot2' package provides a strong API for sequentially
building up a plot, but does not concern itself with composition of multiple
plots. 'patchwork' is a package that expands the API to allow for
arbitrarily complex composition of plots by, among others, providing
mathematical operators for combining multiple plots. Other packages that try
to address this need (but with a different approach) are 'gridExtra' and
'cowplot'.
Author: Thomas Lin Pedersen [cre, aut]
Maintainer: Thomas Lin Pedersen <thomasp85@gmail.com>
Diff between patchwork versions 1.1.2 dated 2022-08-19 and 1.1.3 dated 2023-08-14
DESCRIPTION | 10 - MD5 | 82 +++++++++---- NAMESPACE | 4 NEWS.md | 20 +++ R/aaa.R | 29 ++++ R/add_plot.R | 4 R/arithmetic.R | 10 + R/guides.R | 4 R/import-standalone-obj-type.R |only R/import-standalone-types-check.R |only R/patchwork-package.r | 8 + R/plot_annotation.R | 4 R/plot_layout.R | 19 +-- R/plot_multipage.R | 18 +-- R/plot_patchwork.R | 62 +++++++--- R/wrap_elements.R | 4 R/wrap_ggplot_grob.R | 7 - R/wrap_plots.R | 4 R/zzz.R | 8 - README.md | 20 +-- build/vignette.rds |binary inst/doc/patchwork.html | 183 +++++++++++++++---------------- man/figures/README-example-1.png |binary man/figures/README-unnamed-chunk-2-1.png |binary man/plot_layout.Rd | 5 man/wrap_plots.Rd | 5 tests/testthat/_snaps |only tests/testthat/test-arithmetic.R | 1 tests/testthat/test-layout.R | 20 +-- 29 files changed, 330 insertions(+), 201 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-09 0.3.2
2023-04-02 0.3.1
2022-06-15 0.3
2021-07-14 0.2.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-01-12 1.5.0
2022-07-23 1.4.4
2021-11-22 1.4.1
2020-03-25 1.3.5
2019-05-16 0.9.9.1
2019-03-05 0.9.9
2018-10-06 0.9.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-07-19 0.4.0
2020-12-17 0.3.2
2020-04-06 0.2.2
2020-01-20 0.2.1
2020-01-19 0.2.0
2019-07-03 0.1.3
2018-09-30 0.1.2
2018-09-27 0.1.1
2018-06-15 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-05-16 0.2.0
2022-04-11 0.1.1
2022-03-09 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-01-11 1.5.0
2022-09-09 1.4.8
2022-08-24 1.4.7
2022-07-23 1.4.6
2022-05-25 1.4.4
2021-12-21 1.4.3
2021-11-22 1.4.2
2021-10-10 1.4.1
2021-05-13 1.4.0
2021-02-18 1.3.15
2020-08-26 1.3.14
2020-08-10 1.3.13
2020-03-24 1.3.10
2019-07-26 1.0.0
2019-03-05 0.9.9
2018-10-06 0.9.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-01-13 1.5.0
2022-08-08 1.4.4
2022-05-25 1.4.2
2021-11-22 1.4.1
2021-06-08 1.4.0
2020-04-11 1.3.2
2019-05-18 0.9.9.1
2019-03-10 0.9.9
2018-10-07 0.9.7
Title: A 'ggplot2' Implement of Venn Diagram
Description: Easy-to-use functions to generate 2-7 sets Venn plot in publication quality.
'ggVennDiagram' plot Venn using well-defined geometry dataset and 'ggplot2'. The shapes of 2-4 sets
Venn use circles and ellipses, while the shapes of 4-7 sets Venn use irregular polygons (4 has both forms), which
are developed and imported from another package 'venn', authored by Adrian Dusa. We provided internal functions to
integrate shape data with user provided sets data, and calculated the geometry of every regions/intersections
of them, then separately plot Venn in three components: set edges, set labels, and regions.
From version 1.0, it is possible to customize these components as you demand in ordinary 'ggplot2' grammar.
Author: Chun-Hui Gao [aut, cre] ,
Guangchuang Yu [ctb] ,
Adrian Dusa [ctb]
Maintainer: Chun-Hui Gao <gaospecial@gmail.com>
Diff between ggVennDiagram versions 1.2.2 dated 2022-09-08 and 1.2.3 dated 2023-08-14
DESCRIPTION | 8 MD5 | 30 NEWS.md | 124 R/ggVennDiagram.R | 413 + README.md | 628 +- build/vignette.rds |binary inst/doc/fully-customed.R | 150 inst/doc/fully-customed.Rmd | 256 - inst/doc/fully-customed.html | 4877 +++++++++++------------ inst/doc/using-ggVennDiagram.R | 168 inst/doc/using-ggVennDiagram.html | 4828 +++++++++++----------- inst/doc/using-new-shapes.R | 180 inst/doc/using-new-shapes.html | 967 ++-- inst/doc/venn-plot-with-more-than-four-sets.R | 52 inst/doc/venn-plot-with-more-than-four-sets.html | 774 +-- vignettes/fully-customed.Rmd | 256 - 16 files changed, 6890 insertions(+), 6821 deletions(-)
Title: Create Elegant Data Visualisations Using the Grammar of Graphics
Description: A system for 'declaratively' creating graphics, based on "The
Grammar of Graphics". You provide the data, tell 'ggplot2' how to map
variables to aesthetics, what graphical primitives to use, and it
takes care of the details.
Author: Hadley Wickham [aut] ,
Winston Chang [aut] ,
Lionel Henry [aut],
Thomas Lin Pedersen [aut, cre]
,
Kohske Takahashi [aut],
Claus Wilke [aut] ,
Kara Woo [aut] ,
Hiroaki Yutani [aut] ,
Dewey Dunnington [aut] ,
Posit, PBC [cph, fnd]
Maintainer: Thomas Lin Pedersen <thomas.pedersen@posit.co>
Diff between ggplot2 versions 3.4.2 dated 2023-04-03 and 3.4.3 dated 2023-08-14
ggplot2-3.4.2/ggplot2/tests/testthat/Rplots.pdf |only ggplot2-3.4.3/ggplot2/DESCRIPTION | 6 ggplot2-3.4.3/ggplot2/LICENSE | 4 ggplot2-3.4.3/ggplot2/MD5 | 1652 +-- ggplot2-3.4.3/ggplot2/NAMESPACE | 1426 +- ggplot2-3.4.3/ggplot2/NEWS.md | 4787 +++++----- ggplot2-3.4.3/ggplot2/R/aaa-.R | 28 ggplot2-3.4.3/ggplot2/R/aes-colour-fill-alpha.R | 208 ggplot2-3.4.3/ggplot2/R/aes-evaluation.R | 680 - ggplot2-3.4.3/ggplot2/R/aes-group-order.R | 160 ggplot2-3.4.3/ggplot2/R/aes-linetype-size-shape.R | 148 ggplot2-3.4.3/ggplot2/R/aes-position.R | 150 ggplot2-3.4.3/ggplot2/R/aes.R | 918 - ggplot2-3.4.3/ggplot2/R/annotation-custom.R | 202 ggplot2-3.4.3/ggplot2/R/annotation-logticks.R | 530 - ggplot2-3.4.3/ggplot2/R/annotation-map.R | 210 ggplot2-3.4.3/ggplot2/R/annotation-raster.R | 186 ggplot2-3.4.3/ggplot2/R/annotation.R | 178 ggplot2-3.4.3/ggplot2/R/autolayer.R | 38 ggplot2-3.4.3/ggplot2/R/autoplot.R | 46 ggplot2-3.4.3/ggplot2/R/axis-secondary.R | 596 - ggplot2-3.4.3/ggplot2/R/backports.R | 46 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ggplot2-3.4.3/ggplot2/R/geom-hline.R | 128 ggplot2-3.4.3/ggplot2/R/geom-jitter.R | 136 ggplot2-3.4.3/ggplot2/R/geom-label.R | 304 ggplot2-3.4.3/ggplot2/R/geom-linerange.R | 248 ggplot2-3.4.3/ggplot2/R/geom-map.R | 318 ggplot2-3.4.3/ggplot2/R/geom-path.R | 730 - ggplot2-3.4.3/ggplot2/R/geom-point.R | 402 ggplot2-3.4.3/ggplot2/R/geom-pointrange.R | 122 ggplot2-3.4.3/ggplot2/R/geom-polygon.R | 406 ggplot2-3.4.3/ggplot2/R/geom-quantile.R | 140 ggplot2-3.4.3/ggplot2/R/geom-raster.R | 236 ggplot2-3.4.3/ggplot2/R/geom-rect.R | 178 ggplot2-3.4.3/ggplot2/R/geom-ribbon.R | 554 - ggplot2-3.4.3/ggplot2/R/geom-rug.R | 322 ggplot2-3.4.3/ggplot2/R/geom-segment.R | 298 ggplot2-3.4.3/ggplot2/R/geom-sf.R | 692 - ggplot2-3.4.3/ggplot2/R/geom-smooth.R | 332 ggplot2-3.4.3/ggplot2/R/geom-spoke.R | 138 ggplot2-3.4.3/ggplot2/R/geom-text.R | 556 - ggplot2-3.4.3/ggplot2/R/geom-tile.R | 246 ggplot2-3.4.3/ggplot2/R/geom-violin.R | 432 ggplot2-3.4.3/ggplot2/R/geom-vline.R | 128 ggplot2-3.4.3/ggplot2/R/ggplot-global.R | 108 ggplot2-3.4.3/ggplot2/R/ggplot2-package.R | 20 ggplot2-3.4.3/ggplot2/R/ggproto.R | 702 - ggplot2-3.4.3/ggplot2/R/grob-absolute.R | 94 ggplot2-3.4.3/ggplot2/R/grob-dotstack.R | 124 ggplot2-3.4.3/ggplot2/R/grob-null.R | 52 ggplot2-3.4.3/ggplot2/R/grouping.R | 80 ggplot2-3.4.3/ggplot2/R/guide-bins.R | 1294 +- ggplot2-3.4.3/ggplot2/R/guide-colorbar.R | 1146 +- ggplot2-3.4.3/ggplot2/R/guide-colorsteps.R | 342 ggplot2-3.4.3/ggplot2/R/guide-legend.R | 1496 +-- ggplot2-3.4.3/ggplot2/R/guides-.R | 840 - ggplot2-3.4.3/ggplot2/R/guides-axis.R | 894 - ggplot2-3.4.3/ggplot2/R/guides-grid.R | 68 ggplot2-3.4.3/ggplot2/R/guides-none.R | 88 ggplot2-3.4.3/ggplot2/R/hexbin.R | 90 ggplot2-3.4.3/ggplot2/R/import-standalone-obj-type.R | 698 - ggplot2-3.4.3/ggplot2/R/import-standalone-types-check.R | 1076 +- ggplot2-3.4.3/ggplot2/R/labeller.R | 1244 +- ggplot2-3.4.3/ggplot2/R/labels.R | 494 - ggplot2-3.4.3/ggplot2/R/layer-sf.R | 238 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ggplot2-3.4.3/ggplot2/tests/testthat/test-scales.R | 940 - ggplot2-3.4.3/ggplot2/tests/testthat/test-sec-axis.R | 762 - ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-align.R | 88 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-bin.R | 418 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-bin2d.R | 98 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-boxplot.R | 54 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-contour.R | 164 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-count.R | 12 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-density.R | 240 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-density2d.R | 190 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-ecdf.R | 58 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-ellipsis.R | 20 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-function.R | 340 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-hex.R | 14 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-qq.R | 22 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-sf-coordinates.R | 90 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-sum.R | 144 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-summary.R | 164 ggplot2-3.4.3/ggplot2/tests/testthat/test-stat-ydensity.R | 10 ggplot2-3.4.3/ggplot2/tests/testthat/test-stats.R | 158 ggplot2-3.4.3/ggplot2/tests/testthat/test-summarise-plot.R | 14 ggplot2-3.4.3/ggplot2/tests/testthat/test-theme.R | 1336 +- ggplot2-3.4.3/ggplot2/tests/testthat/test-utilities.R | 336 ggplot2-3.4.3/ggplot2/tests/testthat/test-viridis.R | 32 ggplot2-3.4.3/ggplot2/tests/testthat/test-zzz.R | 14 ggplot2-3.4.3/ggplot2/vignettes/extending-ggplot2.Rmd | 2194 ++-- ggplot2-3.4.3/ggplot2/vignettes/ggplot2-in-packages.Rmd | 488 - ggplot2-3.4.3/ggplot2/vignettes/ggplot2-specs.Rmd | 616 - 828 files changed, 103194 insertions(+), 103168 deletions(-)
Title: Tipping Point Analysis for Bayesian Dynamic Borrowing
Description: Tipping point analysis for clinical trials that employ Bayesian dynamic borrowing via robust meta-analytic predictive (MAP) priors. Further functions facilitate expert elicitation of a primary weight of the informative component of the robust MAP prior and computation of operating characteristics. Intended use is the planning, analysis and interpretation of extrapolation studies in pediatric drug development, but applicability is generally wider.
Author: Christian Stock [aut, cre] ,
Morten Dreher [aut],
Emma Torrini [ctb],
Boehringer Ingelheim Pharma GmbH & Co. KG [cph, fnd]
Maintainer: Christian Stock <christian.stock@boehringer-ingelheim.com>
Diff between tipmap versions 0.5.1 dated 2023-08-13 and 0.5.2 dated 2023-08-14
DESCRIPTION | 6 +++--- MD5 | 18 +++++++++--------- NEWS.md | 4 ++++ R/fit_beta_1exp.R | 4 ---- R/get_model_input_1exp.R | 2 -- R/oc_pos.R | 2 +- build/vignette.rds |binary inst/doc/expert_elicitation.html | 4 ++-- inst/doc/introduction.html | 22 +++++++++++----------- tests/testthat/test-draw_beta_mixture_nsamples.R | 1 + 10 files changed, 31 insertions(+), 32 deletions(-)
Title: Manage Data from Cardiopulmonary Exercise Testing
Description: Import, process, summarize and visualize raw data from
metabolic carts. See Robergs, Dwyer, and Astorino (2010) <doi:10.2165/11319670-000000000-00000> for more details on data processing.
Author: Simon Nolte [aut, cre] ,
Manuel Ramon [rev] for rOpenSci, see
<https://github.com/ropensci/software-review/issues/541>),
James Hunter [rev] for rOpenSci, see
<https://github.com/ropensci/software-review/issues/541>)
Maintainer: Simon Nolte <s.nolte@dshs-koeln.de>
Diff between spiro versions 0.2.0 dated 2023-05-09 and 0.2.1 dated 2023-08-14
DESCRIPTION | 6 MD5 | 25 NEWS.md | 9 R/print.R | 19 R/spiro_plot.R | 4 inst/doc/import_processing.R | 2 inst/doc/import_processing.Rmd | 2 inst/doc/import_processing.html | 284 +- inst/doc/summarizing_plotting.html | 158 - man/print.spiro.Rd | 4 tests/testthat/_snaps/spiro_get.md | 4146 ++++++++++++++++++------------------ tests/testthat/_snaps/spiro_plot.md | 32 tests/testthat/test-print.R |only vignettes/import_processing.Rmd | 2 14 files changed, 2358 insertions(+), 2335 deletions(-)
Title: Bayesian Analyses of Radiocarbon Dates with NIMBLE
Description: Provides utility functions and custom probability distribution for Bayesian analyses of radiocarbon dates within the 'nimble' modelling framework. It includes various population growth models, nimbleFunction objects, as well as a suite of functions for prior and posterior predictive checks for demographic inference (Crema and Shoda (2021) <doi:10.1371/journal.pone.0251695>) and other analyses.
Author: Enrico Crema [aut, cre] ,
Robert Di Napoli [ctb]
Maintainer: Enrico Crema <enrico.crema@gmail.com>
Diff between nimbleCarbon versions 0.2.1 dated 2022-05-10 and 0.2.5 dated 2023-08-14
DESCRIPTION | 8 +-- MD5 | 32 ++++++------- NAMESPACE | 2 NEWS.md | 10 +++- R/dExponentialGrowth.R | 4 - R/dLogisticGrowth.R | 1 R/dLogisticGrowth2.R |only R/modelPlot.R | 35 +++++++++----- R/plot.spdppc.R | 29 ++++++++--- R/register.R | 6 ++ README.md | 2 build/vignette.rds |binary inst/CITATION | 50 +++++++++----------- inst/doc/nimble_carbon_vignette.html | 86 +++++++++++++++++++---------------- man/dLogisticGrowth.Rd | 3 + man/dLogisticGrowth2.Rd |only man/modelPlot.Rd | 11 ++++ man/plot.spdppc.Rd | 6 ++ 18 files changed, 178 insertions(+), 107 deletions(-)
Title: Tools for Processing and Analyzing Files from the Hydrological
Catchment Model HYPE
Description: Work with model files (setup, input, output) from
the hydrological catchment model HYPE: Streamlined file import and export, standard
evaluation plot routines, diverse post-processing and aggregation routines
for hydrological model analysis.
Author: Rene Capell [aut, cre] ,
Conrad Brendel [aut] ,
Jafet Andersson [ctb],
David Gustafsson [ctb],
Jude Musuuza [ctb],
Jude Lubega [ctb]
Maintainer: Rene Capell <hypetools.rene@smhi.se>
Diff between HYPEtools versions 1.4.1 dated 2023-06-30 and 1.5.0 dated 2023-08-14
DESCRIPTION | 17 - MD5 | 34 +- NAMESPACE | 3 NEWS.md | 12 R/function_MergeObs.R |only R/function_PlotAnnualRegime.R | 10 R/function_PlotMapOutput.R | 32 + R/function_PlotMapPoints.R | 17 - R/function_VariableLookup.R | 4 R/functioncollection_internal.R | 633 ++++++++++++++++++++++++++++++++++++++ R/sysdata.rda |binary build/vignette.rds |binary inst/doc/analyze_hype_ts.html | 4 inst/doc/basin_network.html | 2 inst/doc/plot_map_statistics.html | 4 man/MergeObs.Rd |only man/PlotAnnualRegime.Rd | 10 man/PlotMapOutput.Rd | 10 man/PlotMapPoints.Rd | 7 19 files changed, 735 insertions(+), 64 deletions(-)
Title: A Modern and Flexible Web Client for R
Description: The curl() and curl_download() functions provide highly
configurable drop-in replacements for base url() and download.file() with
better performance, support for encryption (https, ftps), gzip compression,
authentication, and other 'libcurl' goodies. The core of the package implements a
framework for performing fully customized requests where data can be processed
either in memory, on disk, or streaming via the callback or connection
interfaces. Some knowledge of 'libcurl' is recommended; for a more-user-friendly
web client see the 'httr' package which builds on this package with http
specific tools and logic.
Author: Jeroen Ooms [aut, cre] ,
Hadley Wickham [ctb],
RStudio [cph]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between curl versions 5.0.1 dated 2023-06-07 and 5.0.2 dated 2023-08-14
DESCRIPTION | 6 +- MD5 | 21 +++++---- NEWS | 5 ++ R/upload.R | 2 build/vignette.rds |binary inst/doc/intro.html | 96 ++++++++++++++++++++++---------------------- src/callbacks.c | 10 ++++ src/callbacks.h | 1 src/handle.c | 9 +++- tests/testthat/test-echo.R | 1 tests/testthat/test-multi.R | 4 - tests/testthat/test-seek.R |only 12 files changed, 91 insertions(+), 64 deletions(-)
Title: Statistical Analysis of Contingency Tables
Description: Provides functions to perform statistical inference of data organized in contingency tables. This package is a companion to the "Statistical Analysis of Contingency Tables" book by Fagerland et al. <ISBN 9781466588172>.
Author: Morten Wang Fagerland [aut],
Stian Lydersen [ctb],
Petter Laake [ctb],
Waldir Leoncio [cre],
Ole Christian Lingjaerde [trl],
Brad J. Biggerstaff [ctb]
Maintainer: Waldir Leoncio <w.l.netto@medisin.uio.no>
Diff between contingencytables versions 2.0.0 dated 2023-05-10 and 2.1.0 dated 2023-08-14
contingencytables-2.0.0/contingencytables/R/all.tables.R |only contingencytables-2.1.0/contingencytables/DESCRIPTION | 15 +- contingencytables-2.1.0/contingencytables/MD5 | 56 ++++--- contingencytables-2.1.0/contingencytables/NEWS.md | 8 + contingencytables-2.1.0/contingencytables/R/CochranArmitage_CI_rx2.R | 2 contingencytables-2.1.0/contingencytables/R/Exact_cond_midP_linear_rank_tests_2xc.R | 11 - contingencytables-2.1.0/contingencytables/R/Exact_cond_midP_tests_rxc.R | 31 ---- contingencytables-2.1.0/contingencytables/R/Exact_multinomial_test_1xc.R | 72 ---------- contingencytables-2.1.0/contingencytables/R/FisherFreemanHalton_asymptotic_test_rxc.R | 31 ---- contingencytables-2.1.0/contingencytables/R/Kendalls_tau_b_rxc_bca.R | 7 contingencytables-2.1.0/contingencytables/R/MidP_multinomial_test_1xc.R | 12 - contingencytables-2.1.0/contingencytables/R/Pearson_correlation_coefficient_rxc_bca.R | 7 contingencytables-2.1.0/contingencytables/R/Score_test_and_CI_marginal_mean_scores_paired_cxc.R | 2 contingencytables-2.1.0/contingencytables/R/Spearman_correlation_coefficient_rxc_bca.R | 7 contingencytables-2.1.0/contingencytables/R/Trend_estimate_CI_tests_rx2.R | 2 contingencytables-2.1.0/contingencytables/R/Wald_test_and_CI_marginal_mean_scores_paired_cxc.R | 2 contingencytables-2.1.0/contingencytables/R/all_tables.R |only contingencytables-2.1.0/contingencytables/R/fill_nchoosek.R |only contingencytables-2.1.0/contingencytables/R/gamma_coefficient_rxc_bca.R | 7 contingencytables-2.1.0/contingencytables/R/generics.R | 25 --- contingencytables-2.1.0/contingencytables/R/linear_rank_test_statistic.R |only contingencytables-2.1.0/contingencytables/R/multiple_hypergeomtric_pdf.R |only contingencytables-2.1.0/contingencytables/R/the_paired_cxc_table_ordinal.R | 2 contingencytables-2.1.0/contingencytables/man/CochranArmitage_CI_rx2.Rd | 2 contingencytables-2.1.0/contingencytables/man/Exact_cond_midP_linear_rank_tests_2xc.Rd | 2 contingencytables-2.1.0/contingencytables/man/Score_test_and_CI_marginal_mean_scores_paired_cxc.Rd | 6 contingencytables-2.1.0/contingencytables/man/Trend_estimate_CI_tests_rx2.Rd | 7 contingencytables-2.1.0/contingencytables/man/Wald_test_and_CI_marginal_mean_scores_paired_cxc.Rd | 6 contingencytables-2.1.0/contingencytables/man/the_paired_cxc_table_ordinal.Rd | 2 contingencytables-2.1.0/contingencytables/tests/testthat/test-biggerstaff.R |only contingencytables-2.1.0/contingencytables/tests/testthat/test-bootstrap.R |only contingencytables-2.1.0/contingencytables/tests/testthat/test-issue13.R | 19 ++ contingencytables-2.1.0/contingencytables/tests/testthat/test-issue39.R |only 33 files changed, 122 insertions(+), 221 deletions(-)
More information about contingencytables at CRAN
Permanent link
Title: Evolving Earth System Variables
Description: The implemented functions allow the query, download, and import of remotely-stored and version-controlled data items. The inherent meta-database maps data files and import code to programming classes and allows access to these items via files deposited in public repositories. The purpose of the project is to increase reproducibility and establish version tracking of results from (paleo)environmental/ecological research.
Author: Adam T. Kocsis [cre, aut] ,
Nussaibah B. Raja [aut] ,
Deutsche Forschungsgemeinschaft [fnd],
FAU GeoZentrum Nordbayern [fnd]
Maintainer: Adam T. Kocsis <adam.t.kocsis@gmail.com>
Diff between chronosphere versions 0.5.0 dated 2023-06-13 and 0.6.0 dated 2023-08-14
chronosphere-0.5.0/chronosphere/NEWS |only chronosphere-0.6.0/chronosphere/DESCRIPTION | 10 - chronosphere-0.6.0/chronosphere/MD5 | 37 ++- chronosphere-0.6.0/chronosphere/NEWS.md |only chronosphere-0.6.0/chronosphere/R/attributes.R | 8 chronosphere-0.6.0/chronosphere/R/call.R | 12 - chronosphere-0.6.0/chronosphere/R/datasets.R | 34 +-- chronosphere-0.6.0/chronosphere/R/fetching.R | 118 +++++------- chronosphere-0.6.0/chronosphere/R/global.R | 4 chronosphere-0.6.0/chronosphere/R/info.R | 48 ++-- chronosphere-0.6.0/chronosphere/inst/CITATION | 4 chronosphere-0.6.0/chronosphere/inst/extdata/R/subguide.csv | 13 - chronosphere-0.6.0/chronosphere/man/configure.Rd | 2 chronosphere-0.6.0/chronosphere/man/datasets.Rd | 14 - chronosphere-0.6.0/chronosphere/man/fetch.Rd | 26 +- chronosphere-0.6.0/chronosphere/man/figures |only chronosphere-0.6.0/chronosphere/man/info.Rd | 10 - chronosphere-0.6.0/chronosphere/man/reference.Rd | 15 - 18 files changed, 179 insertions(+), 176 deletions(-)
Title: Dynamic Documents for R
Description: Convert R Markdown documents into a variety of formats.
Author: JJ Allaire [aut],
Yihui Xie [aut, cre] ,
Christophe Dervieux [aut] ,
Jonathan McPherson [aut],
Javier Luraschi [aut],
Kevin Ushey [aut],
Aron Atkins [aut],
Hadley Wickham [aut],
Joe Cheng [aut],
Winston Chang [aut],
Richard Iannone [aut] ,
Andrew Dun [...truncated...]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between rmarkdown versions 2.23 dated 2023-07-01 and 2.24 dated 2023-08-14
DESCRIPTION | 6 +- MD5 | 23 ++++----- NAMESPACE | 2 NEWS.md | 10 ++++ R/md_document.R | 2 R/output_format.R | 90 ++++++++++++++++++++++++++++++++++-- R/render.R | 9 +++ R/shiny_prerendered.R | 33 ++++++++++--- build/vignette.rds |binary man/output_format.Rd | 8 ++- man/output_format_dependency.Rd |only tests/testrmd.R | 2 tests/testthat/test-output_format.R | 79 +++++++++++++++++++++++++++++++ 13 files changed, 235 insertions(+), 29 deletions(-)
Title: Easily Install and Load the 'nflverse'
Description: The 'nflverse' is a set of packages dedicated to data of the
National Football League. This package is designed to make it easy to
install and load multiple 'nflverse' packages in a single step. Learn
more about the 'nflverse' at <https://nflverse.nflverse.com/>.
Author: Sebastian Carl [aut, cre],
Ben Baldwin [aut],
Lee Sharpe [aut],
Tan Ho [aut] ,
John Edwards [aut]
Maintainer: Sebastian Carl <mrcaseb@gmail.com>
Diff between nflverse versions 1.0.2 dated 2022-07-07 and 1.0.3 dated 2023-08-14
DESCRIPTION | 19 +-- LICENSE | 4 MD5 | 40 +++--- NAMESPACE | 24 +-- NEWS.md | 4 R/attach.R | 124 +++++++++---------- R/conflicts.R | 164 +++++++++++++------------- R/core.R | 14 +- R/nflverse-package.R | 30 ++-- R/pipe.R | 22 +-- R/updates_and_reports.R | 262 +++++++++++++++++++++--------------------- R/utils.R | 62 ++++----- R/zzz.R | 40 +++--- README.md | 178 ++++++++++++++-------------- man/nflverse-package.Rd | 67 +++++----- man/nflverse_packages.Rd | 40 +++--- man/nflverse_sitrep.Rd | 28 ++-- man/nflverse_update.Rd | 70 +++++------ man/pipe.Rd | 24 +-- tests/testthat.R | 8 - tests/testthat/test-reports.R | 20 +-- 21 files changed, 627 insertions(+), 617 deletions(-)
More information about lterdatasampler at CRAN
Permanent link
Title: Integrating Biomarker-Based Assessments and Radarchart Creation
Description: Several functions to calculate two important indexes (IBR (Integrated Biomarker Response) and IBRv2 (Integrated Biological Response version 2)), it also calculates the standardized values for enzyme activity for each index, and it has a graphing function to perform radarplots that make great data visualization for this type of data. Beliaeff, B., & Burgeot, T. (2002). <https://pubmed.ncbi.nlm.nih.gov/12069320/>. Sanchez, W., Burgeot, T., & Porcher, J.-M. (2013).<doi:10.1007/s11356-012-1359-1>. Devin, S., Burgeot, T., Giambérini, L., Minguez, L., & Pain-Devin, S. (2014). <doi:10.1007/s11356-013-2169-9>. Minato N. (2022). <https://minato.sip21c.org/msb/>.
Author: Anna Carolina Resende [aut, cre]
,
Diego Mauro Carneiro Pereira [aut]
Maintainer: Anna Carolina Resende <annac.resende@gmail.com>
Diff between IBRtools versions 0.1.2 dated 2022-12-22 and 0.1.3 dated 2023-08-14
DESCRIPTION | 8 +++++--- MD5 | 30 +++++++++++++++++++----------- NEWS.md | 7 +++++++ R/enzact_coef.R | 6 +++--- R/ibr_chart.R | 7 +++---- R/ibr_index.R | 34 ++++++++-------------------------- R/ibr_std.R | 8 ++++---- README.md | 1 + data/enzact_coef.RData |binary man/enzact_coef.Rd | 2 -- man/ibr_index.Rd | 13 +++++++------ man/ibr_std.Rd | 2 +- tests |only 13 files changed, 58 insertions(+), 60 deletions(-)
Title: Survival Analysis
Description: Contains the core survival analysis routines, including
definition of Surv objects,
Kaplan-Meier and Aalen-Johansen (multi-state) curves, Cox models,
and parametric accelerated failure time models.
Author: Terry M Therneau [aut, cre],
Thomas Lumley [ctb, trl] ,
Atkinson Elizabeth [ctb],
Crowson Cynthia [ctb]
Maintainer: Terry M Therneau <therneau.terry@mayo.edu>
Diff between survival versions 3.5-5 dated 2023-03-12 and 3.5-7 dated 2023-08-14
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Title: Expanded Replacement and Extension of the 'optim' Function
Description: Provides a replacement and extension of the optim()
function to call to several function minimization codes in R in a single
statement. These methods handle smooth, possibly box constrained functions
of several or many parameters. Note that function 'optimr()' was prepared to
simplify the incorporation of minimization codes going forward. Also implements some
utility codes and some extra solvers, including safeguarded Newton methods.
Many methods previously separate are now included here.
This is the version for CRAN.
Author: John C Nash [aut, cre],
Ravi Varadhan [aut],
Gabor Grothendieck [ctb]
Maintainer: John C Nash <nashjc@uottawa.ca>
Diff between optimx versions 2022-4.30 dated 2022-05-10 and 2023-8.13 dated 2023-08-14
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Title: Sparse and Dense Matrix Classes and Methods
Description: A rich hierarchy of sparse and dense matrix classes,
including general, symmetric, triangular, and diagonal matrices
with numeric, logical, or pattern entries. Efficient methods for
operating on such matrices, often wrapping the 'BLAS', 'LAPACK',
and 'SuiteSparse' libraries.
Author: Douglas Bates [aut] ,
Martin Maechler [aut, cre] ,
Mikael Jagan [aut] ,
Timothy A. Davis [ctb] )),
Jens Oehlschlaegel [ctb] ),
Jason Riedy [ctb] and onenormest, Copyright: Regents of the
University of California),
R Core Team [ctb]
Maintainer: Martin Maechler <mmaechler+Matrix@gmail.com>
Diff between Matrix versions 1.6-0 dated 2023-07-08 and 1.6-1 dated 2023-08-14
DESCRIPTION | 10 MD5 | 303 +- NAMESPACE | 30 R/Auxiliaries.R | 444 -- R/Csparse.R | 22 R/KhatriRao.R | 4 R/LU.R | 38 R/Math.R | 14 R/Matrix.R | 32 R/Ops.R | 1768 ++++++----- R/Rsparse.R | 18 R/SparseM-conv.R | 22 R/Summary.R | 16 R/Tsparse.R | 10 R/bandSparse.R | 2 R/bind2.R | 632 ++-- R/chol.R | 12 R/coerce.R |only R/colSums.R | 259 - R/denseMatrix.R | 263 - R/determinant.R | 8 R/diagMatrix.R | 244 - R/eigen.R | 6 R/expm.R | 14 R/graph-conv.R | 4 R/image.R | 4 R/indMatrix.R | 187 - R/is.na.R | 18 R/kronecker.R | 44 R/nnzero.R | 37 R/norm.R | 14 R/not.R | 4 R/pMatrix.R | 33 R/packedMatrix.R | 30 R/products.R | 77 R/qr.R | 32 R/rcond.R | 2 R/solve.R | 30 R/spModels.R | 16 R/sparseMatrix.R | 118 R/sparseVector.R | 8 R/symmetricMatrix.R | 9 R/triangularMatrix.R | 8 R/unpackedMatrix.R | 98 R/which.R | 4 R/zzz.R | 137 inst/NEWS.Rd | 87 inst/doc/Comparisons.pdf |binary inst/doc/Design-issues.pdf |binary inst/doc/Intro2Matrix.pdf |binary inst/doc/Introduction.pdf |binary inst/doc/sparseModels.pdf |binary inst/po/de/LC_MESSAGES/Matrix.mo |binary inst/po/de/LC_MESSAGES/R-Matrix.mo |binary inst/po/en@quot/LC_MESSAGES/Matrix.mo |binary inst/po/en@quot/LC_MESSAGES/R-Matrix.mo |binary inst/po/fr/LC_MESSAGES/Matrix.mo |binary inst/po/fr/LC_MESSAGES/R-Matrix.mo |binary inst/po/it/LC_MESSAGES/Matrix.mo |binary inst/po/it/LC_MESSAGES/R-Matrix.mo |binary inst/po/ko/LC_MESSAGES/Matrix.mo |binary inst/po/ko/LC_MESSAGES/R-Matrix.mo |binary inst/po/lt/LC_MESSAGES/Matrix.mo |binary inst/po/lt/LC_MESSAGES/R-Matrix.mo |binary inst/po/pl/LC_MESSAGES/Matrix.mo |binary inst/po/pl/LC_MESSAGES/R-Matrix.mo |binary inst/test-tools-1.R | 94 inst/test-tools.R | 1 man/CsparseMatrix-class.Rd | 11 man/Matrix-class.Rd | 23 man/RsparseMatrix-class.Rd | 11 man/TsparseMatrix-class.Rd | 11 man/abIndex-class.Rd | 2 man/cBind.Rd | 62 man/colSums.Rd | 20 man/dMatrix-class.Rd | 4 man/ddenseMatrix-class.Rd | 2 man/ddiMatrix-class.Rd | 1 man/denseMatrix-class.Rd | 23 man/dgeMatrix-class.Rd | 3 man/diagonalMatrix-class.Rd | 21 man/drop0.Rd | 85 man/dsCMatrix-class.Rd | 1 man/dsRMatrix-class.Rd | 1 man/dsparseMatrix-class.Rd | 8 man/dtRMatrix-class-def.Rd | 10 man/expm.Rd | 16 man/fastMisc.Rd | 298 +- man/generalMatrix-class.Rd | 3 man/graph2T.Rd | 2 man/indMatrix-class.Rd | 22 man/ldenseMatrix-class.Rd | 2 man/ldiMatrix-class.Rd | 1 man/lgeMatrix-class.Rd | 3 man/lsparseMatrix-classes.Rd | 10 man/lu.Rd | 2 man/nMatrix-class.Rd | 2 man/ndenseMatrix-class.Rd | 2 man/ngeMatrix-class.Rd | 3 man/nsparseMatrix-classes.Rd | 10 man/printSpMatrix.Rd | 2 man/sparseMatrix-class.Rd | 3 man/unpackedMatrix-class.Rd | 2 po/Matrix.pot | 1013 ++++-- po/R-Matrix.pot | 89 po/R-de.po | 133 po/R-fr.po | 139 po/R-it.po | 128 po/R-ko.po | 138 po/R-lt.po | 124 po/R-pl.po | 211 - po/de.po | 1194 +++++--- po/fr.po | 1196 +++++--- po/it.po | 1188 ++++---- po/ko.po | 1185 ++++--- po/lt.po | 1188 ++++---- po/pl.po | 1497 ++++++---- src/CHMfactor.c | 134 src/CHMfactor.h | 14 src/Csparse.c | 22 src/Csparse.h | 1 src/Mdefines.h | 70 src/Mutils.c | 63 src/Mutils.h | 4 src/bind.c |only src/bind.h |only src/chm_common.c | 14 src/coerce.c |only src/coerce.h |only src/dense.c | 1444 --------- src/dense.h | 15 src/dgCMatrix.c | 1 src/factorizations.c | 82 src/init.c | 64 src/kappa.c | 44 src/packedMatrix.c | 141 src/packedMatrix.h | 1 src/products.c | 637 ++-- src/products.h | 18 src/scripts/DEPS.mkf | 4 src/scripts/SOURCES_C.mkf | 44 src/sparse.c | 4741 +++++++++----------------------- src/sparse.h | 69 src/sparseVector.c | 33 src/sparseVector.h | 3 src/subscript.c | 152 - src/subscript.h | 6 src/unpackedMatrix.c | 183 - src/unpackedMatrix.h | 1 src/validity.c | 1466 +++++---- src/validity.h | 19 tests/Simple.R | 45 tests/group-methods.R | 8 tests/indexing.Rout.save | 32 tests/matprod.R | 2 155 files changed, 11331 insertions(+), 13618 deletions(-)
Title: Bayesian Regression Models using 'Stan'
Description: Fit Bayesian generalized (non-)linear multivariate multilevel models
using 'Stan' for full Bayesian inference. A wide range of distributions
and link functions are supported, allowing users to fit -- among others --
linear, robust linear, count data, survival, response times, ordinal,
zero-inflated, hurdle, and even self-defined mixture models all in a
multilevel context. Further modeling options include both theory-driven and
data-driven non-linear terms, auto-correlation structures, censoring and
truncation, meta-analytic standard errors, and quite a few more.
In addition, all parameters of the response distribution can be predicted
in order to perform distributional regression. Prior specifications are
flexible and explicitly encourage users to apply prior distributions that
actually reflect their prior knowledge. Models can easily be evaluated and
compared using several methods assessing posterior or prior predictions.
References: Bürkner (2017) <doi:10.18637/jss.v080.i01>;
B [...truncated...]
Author: Paul-Christian Buerkner [aut, cre],
Jonah Gabry [ctb],
Sebastian Weber [ctb],
Andrew Johnson [ctb],
Martin Modrak [ctb],
Hamada S. Badr [ctb],
Frank Weber [ctb],
Mattan S. Ben-Shachar [ctb],
Hayden Rabel [ctb],
Simon C. Mills [ctb],
Stephen Wild [ctb]
Maintainer: Paul-Christian Buerkner <paul.buerkner@gmail.com>
Diff between brms versions 2.19.0 dated 2023-03-14 and 2.20.1 dated 2023-08-14
DESCRIPTION | 13 MD5 | 163 ++++---- NAMESPACE | 23 - NEWS.md | 30 + R/backends.R | 4 R/bridgesampling.R | 2 R/brm.R | 12 R/brm_multiple.R | 18 R/brmsfit-class.R | 13 R/brmsfit-helpers.R | 16 R/brmsfit-methods.R | 59 ++- R/brmsformula.R | 20 - R/brmsterms.R | 58 +-- R/conditional_effects.R | 19 - R/data-helpers.R | 19 - R/data-predictor.R | 163 +++++--- R/data-response.R | 48 +- R/emmeans.R | 9 R/exclude_pars.R | 6 R/families.R | 13 R/formula-ad.R | 2 R/formula-gp.R | 2 R/formula-re.R | 4 R/formula-sp.R | 12 R/hypothesis.R | 7 R/loo_moment_match.R | 2 R/make_stancode.R | 4 R/make_standata.R | 39 +- R/misc.R | 95 +---- R/plot.R | 6 R/posterior_epred.R | 19 - R/pp_mixture.R | 2 R/predictive_error.R | 16 R/predictor.R | 6 R/prepare_predictions.R | 19 - R/priors.R | 557 +++++++++++++++--------------- R/projpred.R | 16 R/rename_pars.R | 281 +++++++-------- R/restructure.R | 79 ++-- R/stan-helpers.R | 5 R/stan-predictor.R | 326 ++++++++++------- R/stan-prior.R | 206 +++++------ R/stanvars.R | 10 R/sysdata.rda |binary R/update.R | 1 README.md | 2 inst/chunks/fun_horseshoe.stan | 11 inst/chunks/fun_r2d2.stan | 10 inst/doc/brms_customfamilies.html | 156 ++++---- inst/doc/brms_distreg.html | 158 ++++---- inst/doc/brms_families.html | 4 inst/doc/brms_missings.html | 82 ++-- inst/doc/brms_monotonic.html | 188 +++++----- inst/doc/brms_multilevel.pdf |binary inst/doc/brms_multivariate.html | 242 ++++++------- inst/doc/brms_nonlinear.html | 245 ++++++------- inst/doc/brms_overview.pdf |binary inst/doc/brms_phylogenetics.html | 320 ++++++++--------- inst/doc/brms_threading.R | 25 - inst/doc/brms_threading.Rmd | 11 inst/doc/brms_threading.html | 605 ++++++++++++++++----------------- man/R2D2.Rd | 47 ++ man/as.brmsprior.Rd |only man/brm.Rd | 8 man/brm_multiple.Rd | 10 man/brmsfamily.Rd | 8 man/brmsfit-class.Rd | 3 man/get_refmodel.brmsfit.Rd | 5 man/horseshoe.Rd | 38 +- man/lasso.Rd | 34 - man/predictive_error.brmsfit.Rd | 6 man/rename_pars.Rd | 17 man/residuals.brmsfit.Rd | 11 man/restructure.Rd | 6 man/set_prior.Rd | 100 ++--- man/stanvar.Rd | 4 tests/testthat/tests.brmsfit-methods.R | 6 tests/testthat/tests.make_stancode.R | 176 +++++---- tests/testthat/tests.make_standata.R | 90 ++-- tests/testthat/tests.posterior_epred.R | 5 tests/testthat/tests.priors.R | 10 tests/testthat/tests.restructure.R | 24 - vignettes/brms_threading.Rmd | 11 83 files changed, 2741 insertions(+), 2361 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-12-20 0.3-1
2022-12-20 0.3-2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-09-29 1.4
2018-06-11 1.3
2017-04-30 1.2
2015-10-27 1.1
2015-02-04 1.0