Title: Supplementary Item Response Theory Models
Description: Supplementary functions for item response models aiming
to complement existing R packages. The functionality includes among others
multidimensional compensatory and noncompensatory IRT models
(Reckase, 2009, <doi:10.1007/978-0-387-89976-3>),
MCMC for hierarchical IRT models and testlet models
(Fox, 2010, <doi:10.1007/978-1-4419-0742-4>),
NOHARM (McDonald, 1982, <doi:10.1177/014662168200600402>),
Rasch copula model (Braeken, 2011, <doi:10.1007/s11336-010-9190-4>;
Schroeders, Robitzsch & Schipolowski, 2014, <doi:10.1111/jedm.12054>),
faceted and hierarchical rater models (DeCarlo, Kim & Johnson, 2011,
<doi:10.1111/j.1745-3984.2011.00143.x>),
ordinal IRT model (ISOP; Scheiblechner, 1995, <doi:10.1007/BF02301417>),
DETECT statistic (Stout, Habing, Douglas & Kim, 1996,
<doi:10.1177/014662169602000403>), local structural equation modeling
(LSEM; Hildebrandt, Luedtke, Robitzsch, Sommer & Wilhelm, 2016,
<doi:10.1080/00273171.20 [...truncated...]
Author: Alexander Robitzsch [aut,cre]
Maintainer: Alexander Robitzsch <robitzsch@ipn.uni-kiel.de>
Diff between sirt versions 4.0-32 dated 2024-01-17 and 4.1-15 dated 2024-02-05
DESCRIPTION | 8 - MD5 | 66 ++++++++-------- R/RcppExports.R | 2 R/conf.detect.R | 39 ++++----- R/invariance.alignment.R | 85 +++++++++++++++------ R/invariance_alignment_center_parameters.R | 12 ++ R/invariance_alignment_define_parameters.R | 20 +++- R/noharm.sirt.R | 15 +-- R/normal2.cw.R | 7 - R/rasch_mml2_mstep_calc_likelihood.R | 4 R/regpolca.R | 20 ++-- R/regpolca_define_customItems.R | 6 - R/regpolca_penalty_fun.R | 8 - R/regpolca_postproc_count_regularized_parameters.R | 7 - R/regpolca_postproc_irf.R | 6 - R/regpolca_postproc_prob_Theta.R | 6 - R/regpolca_run_xxirt_random_starts.R | 8 - R/rm_determine_fixed_tau_parameters.R | 4 R/rm_facets_calcprobs.R | 8 - R/write.fwf2.R | 14 +-- R/xxirt.R | 8 - R/xxirt_em_algorithm.R | 6 - R/xxirt_hessian.R | 9 -- R/xxirt_newton_raphson.R | 18 ++-- R/xxirt_nr_grad_fun_Rcpp.R | 8 - R/xxirt_nr_optim_fun.R | 15 +-- R/xxirt_postproc_parameters.R | 2 build/partial.rdb |binary inst/NEWS | 10 ++ man/data.trees.Rd | 3 man/invariance.alignment.Rd | 17 ++-- man/rasch.jml.jackknife1.Rd | 6 - man/xxirt.Rd | 6 - src/RcppExports.cpp | 2 34 files changed, 268 insertions(+), 187 deletions(-)
Title: Biodiversity Data from the GBIF Node Network
Description: The Global Biodiversity Information Facility
('GBIF', <https://www.gbif.org>) sources data from an international network
of data providers, known as 'nodes'. Several of these nodes - the "living
atlases" (<https://living-atlases.gbif.org>) - maintain their own web
services using software originally developed by the Atlas of Living
Australia ('ALA', <https://www.ala.org.au>). 'galah' enables the R community
to directly access data and resources hosted by 'GBIF' and its partner nodes.
Author: Martin Westgate [aut, cre],
Matilda Stevenson [aut],
Dax Kellie [aut],
Peggy Newman [aut]
Maintainer: Martin Westgate <martin.westgate@csiro.au>
Diff between galah versions 2.0.0 dated 2023-11-20 and 2.0.1 dated 2024-02-05
galah-2.0.0/galah/R/compute_metadata.R |only galah-2.0.0/galah/R/compute_occurrences_count.R |only galah-2.0.0/galah/R/compute_species.R |only galah-2.0.0/galah/R/compute_species_count.R |only galah-2.0.0/galah/R/compute_unnest.R |only galah-2.0.1/galah/DESCRIPTION | 6 galah-2.0.1/galah/MD5 | 125 +++---- galah-2.0.1/galah/NAMESPACE | 5 galah-2.0.1/galah/NEWS.md | 13 galah-2.0.1/galah/R/atlas_media.R | 5 galah-2.0.1/galah/R/build_checks.R |only galah-2.0.1/galah/R/build_query_set.R |only galah-2.0.1/galah/R/check.R | 8 galah-2.0.1/galah/R/check_queue.R | 4 galah-2.0.1/galah/R/collapse.R | 151 ++------- galah-2.0.1/galah/R/collapse_occurrences_count.R | 7 galah-2.0.1/galah/R/collapse_unnest.R | 2 galah-2.0.1/galah/R/collect.R | 6 galah-2.0.1/galah/R/collect_media.R | 21 + galah-2.0.1/galah/R/collect_metadata.R | 4 galah-2.0.1/galah/R/collect_species.R | 8 galah-2.0.1/galah/R/compute.R | 157 +-------- galah-2.0.1/galah/R/compute_occurrences.R | 8 galah-2.0.1/galah/R/parse_checks.R |only galah-2.0.1/galah/R/parse_metadata.R |only galah-2.0.1/galah/R/parse_metadata_unnest.R |only galah-2.0.1/galah/R/parse_occurrences_count.R |only galah-2.0.1/galah/R/parse_query.R |only galah-2.0.1/galah/R/parse_species_count.R |only galah-2.0.1/galah/R/print.R | 61 +++ galah-2.0.1/galah/R/query_API.R | 21 + galah-2.0.1/galah/R/quosure_handling.R | 6 galah-2.0.1/galah/R/show_values.R | 4 galah-2.0.1/galah/build/vignette.rds |binary galah-2.0.1/galah/inst/doc/object_oriented_programming.Rmd | 61 +-- galah-2.0.1/galah/inst/doc/object_oriented_programming.html | 163 +++++----- galah-2.0.1/galah/inst/doc/spatial_filtering.Rmd | 2 galah-2.0.1/galah/inst/doc/spatial_filtering.html | 2 galah-2.0.1/galah/inst/doc/temporal_filtering.Rmd | 2 galah-2.0.1/galah/inst/doc/temporal_filtering.html | 4 galah-2.0.1/galah/man/collapse_galah.Rd | 19 - galah-2.0.1/galah/man/collect_galah.Rd | 6 galah-2.0.1/galah/man/compute_galah.Rd | 18 - galah-2.0.1/galah/man/print_galah_objects.Rd | 7 galah-2.0.1/galah/tests/testthat.R | 1 galah-2.0.1/galah/tests/testthat/test-atlas_counts.R | 46 ++ galah-2.0.1/galah/tests/testthat/test-atlas_media.R | 61 ++- galah-2.0.1/galah/tests/testthat/test-atlas_occurrences.R | 43 +- galah-2.0.1/galah/tests/testthat/test-atlas_species.R | 17 - galah-2.0.1/galah/tests/testthat/test-count_arrange_slice.R | 2 galah-2.0.1/galah/tests/testthat/test-galah_apply_profile.R | 8 galah-2.0.1/galah/tests/testthat/test-galah_filter.R | 6 galah-2.0.1/galah/tests/testthat/test-galah_group_by.R | 12 galah-2.0.1/galah/tests/testthat/test-galah_select.R | 48 -- galah-2.0.1/galah/tests/testthat/test-international-Austria.R | 84 +++-- galah-2.0.1/galah/tests/testthat/test-international-Brazil.R | 98 ++++-- galah-2.0.1/galah/tests/testthat/test-international-Estonia.R | 52 ++- galah-2.0.1/galah/tests/testthat/test-international-France.R | 68 +++- galah-2.0.1/galah/tests/testthat/test-international-GBIF.R | 96 ++--- galah-2.0.1/galah/tests/testthat/test-international-Guatemala.R | 60 ++- galah-2.0.1/galah/tests/testthat/test-international-Portugal.R | 64 +++ galah-2.0.1/galah/tests/testthat/test-international-Spain.R | 92 ++++- galah-2.0.1/galah/tests/testthat/test-international-Sweden.R | 97 ++++- galah-2.0.1/galah/tests/testthat/test-international-UK.R | 115 ++++--- galah-2.0.1/galah/tests/testthat/test-request_metadata_unnest.R | 65 +-- galah-2.0.1/galah/tests/testthat/test-search_taxa.R | 4 galah-2.0.1/galah/tests/testthat/test-show_values.R | 2 galah-2.0.1/galah/vignettes/object_oriented_programming.Rmd | 61 +-- galah-2.0.1/galah/vignettes/spatial_filtering.Rmd | 2 galah-2.0.1/galah/vignettes/temporal_filtering.Rmd | 2 70 files changed, 1196 insertions(+), 916 deletions(-)
Title: Scalable Robust Estimators with High Breakdown Point for
Incomplete Data
Description: Robust Location and Scatter Estimation and Robust
Multivariate Analysis with High Breakdown Point for Incomplete
Data (missing values) (Todorov et al. (2010) <doi:10.1007/s11634-010-0075-2>).
Author: Valentin Todorov [aut, cre]
Maintainer: Valentin Todorov <valentin.todorov@chello.at>
Diff between rrcovNA versions 0.5-0 dated 2023-06-23 and 0.5-1 dated 2024-02-05
ChangeLog | 7 +++++++ DESCRIPTION | 10 +++++----- MD5 | 10 +++++----- README.md | 2 +- man/impseq.Rd | 2 +- man/impseqrob.Rd | 2 +- 6 files changed, 20 insertions(+), 13 deletions(-)
Title: Wrapper for MUMPS Library
Description: Some basic features of 'MUMPS' (Multifrontal Massively Parallel
sparse direct Solver) are wrapped in a class whose methods can be used
for sequentially solving a sparse linear system (symmetric or not)
with one or many right hand sides (dense or sparse).
There is a possibility to do separately symbolic analysis,
LU (or LDL^t) factorization and system solving.
Third part ordering libraries are included and can be used: 'PORD', 'METIS', 'SCOTCH'.
'MUMPS' method was first described in Amestoy et al. (2001) <doi:10.1137/S0895479899358194>
and Amestoy et al. (2006) <doi:10.1016/j.parco.2005.07.004>.
Author: Serguei Sokol [aut, cre],
Emmanuel Agullo [ctb],
Patrick Amestoy [ctb, cph],
Maurice Bremond [ctb],
Alfredo Buttari [ctb],
Philippe Combes [ctb],
Marie Durand [ctb],
Aurelia Fevre [ctb],
Abdou Guermouche [ctb],
Guillaume Joslin [ctb],
Jacko Koster [c [...truncated...]
Maintainer: Serguei Sokol <sokol@insa-toulouse.fr>
Diff between rmumps versions 5.2.1-26 dated 2023-11-28 and 5.2.1-27 dated 2024-02-05
DESCRIPTION | 8 +- MD5 | 26 ++++----- NEWS | 6 ++ man/rmumps-package.Rd | 2 src/Makevars | 3 - src/Makevars.seq | 3 - src/lib/MUMPS_5.2.1/Makefile | 4 - src/lib/MUMPS_5.2.1/libseq/Makefile | 2 src/lib/MUMPS_5.2.1/src/Makefile | 4 - src/lib/MUMPS_5.2.1/src/dmumps_comm_buffer.F | 77 --------------------------- src/lib/MUMPS_5.2.1/src/dsol_aux.F | 2 src/lib/MUMPS_5.2.1/src/dsol_c.F | 20 ------- src/lib/Makefile | 2 src/lib/scotch_6.0.9/src/esmumps/Makefile | 2 14 files changed, 35 insertions(+), 126 deletions(-)
Title: Streamline Building Panel Data from Panel Study of Income
Dynamics ('PSID') Raw Files
Description: Streamline the management, creation, and formatting of panel data from the Panel Study of Income Dynamics ('PSID') <https://psidonline.isr.umich.edu> using this user-friendly tool. Simply define variable names and input code book details directly from the 'PSID' official website, and this toolbox will efficiently facilitate the data preparation process, transforming raw 'PSID' files into a well-organized format ready for further analysis.
Author: Shuyi Qiu [aut, cre]
Maintainer: Shuyi Qiu <shuyi.qiu@duke.edu>
Diff between psidread versions 1.0.2 dated 2024-01-23 and 1.0.3 dated 2024-02-05
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 2 ++ R/psid_unzip.R | 5 ++++- inst/doc/my-vignette.html | 8 ++++---- man/psid_unzip.Rd | 4 +++- tests/testthat/test-psid_unzip.R | 23 ++++++++++++++++------- 7 files changed, 38 insertions(+), 22 deletions(-)
Title: Progress Bar for Parallel Tasks
Description: A simple interface in the form of R6 classes for executing tasks in
parallel, tracking their progress, and displaying accurate progress bars.
Author: Mihai Constantin [aut, cre]
Maintainer: Mihai Constantin <mihai@mihaiconstantin.com>
Diff between parabar versions 1.1.0 dated 2023-05-07 and 1.1.1 dated 2024-02-05
DESCRIPTION | 8 - MD5 | 22 +-- NEWS.md | 16 ++ R/Options.R | 6 + R/ProgressTrackingContext.R | 29 +++++ R/TaskState.R | 2 R/UserApiConsumer.R | 3 README.md | 9 + build/vignette.rds |binary man/Options.Rd | 5 tests/testthat/helpers.R | 134 +++++++++++++++++++++++- tests/testthat/test-progress-tracking-context.R | 35 ++++++ 12 files changed, 245 insertions(+), 24 deletions(-)
Title: Interactive Grammar of Graphics
Description: An implementation of an interactive grammar of graphics,
taking the best parts of 'ggplot2', combining them with the reactive
framework of 'shiny' and drawing web graphics using 'vega'.
Author: Hadley Wickham [aut, cre],
Winston Chang [aut],
Posit [cph],
jQuery Foundation [cph] ,
jQuery contributors [ctb, cph] ,
jQuery UI contributors [ctb, cph] ,
Mike Bostock [ctb, cph] ,
D3 contributors [ctb] ,
Trifacta Inc. [cph] ,
Vega contributors [ctb [...truncated...]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between ggvis versions 0.4.8 dated 2023-03-08 and 0.4.9 dated 2024-02-05
DESCRIPTION | 69 +++++++++++++++--------------- MD5 | 22 +++++---- NAMESPACE | 4 + NEWS.md | 4 + R/compute_bin.R | 1 R/compute_boxplot.R | 3 + R/ggvis.R | 2 R/utils_data.R | 1 README.md | 4 - demo/rmarkdown/html_document.html |only demo/rmarkdown/ioslides_presentation.html |only man/add_scale.Rd | 3 - man/bin_vector.Rd | 11 ++++ 13 files changed, 71 insertions(+), 53 deletions(-)
Title: A Lightweight and Flexible Web Framework
Description: A very flexible framework for building server side logic in
R. The framework is unopinionated when it comes to how HTTP requests
and WebSocket messages are handled and supports all levels of app
complexity; from serving static content to full-blown dynamic
web-apps. Fiery does not hold your hand as much as e.g. the shiny
package does, but instead sets you free to create your web app the way
you want.
Author: Thomas Lin Pedersen [cre, aut]
Maintainer: Thomas Lin Pedersen <thomasp85@gmail.com>
Diff between fiery versions 1.2.0 dated 2023-03-17 and 1.2.1 dated 2024-02-05
DESCRIPTION | 8 ++--- MD5 | 20 ++++++------ NEWS.md | 4 ++ build/vignette.rds |binary inst/doc/delayed.R | 2 - inst/doc/delayed.html | 25 ++++++++++----- inst/doc/events.R | 6 +-- inst/doc/events.html | 37 +++++++++++++---------- inst/doc/plugins.R | 6 +-- inst/doc/plugins.html | 71 ++++++++++++++++++++++++--------------------- tests/testthat/test-Fire.R | 1 11 files changed, 103 insertions(+), 77 deletions(-)
Title: Electric Vehicle Charging Sessions Profiling and Modelling
Description: Tools for modelling electric vehicle charging sessions into
generic groups with similar connection patterns called "user profiles",
using Gaussian Mixture Models clustering. The clustering and profiling
methodology is described in Cañigueral and Meléndez (2021, ISBN:0142-0615)
<doi:10.1016/j.ijepes.2021.107195>.
Author: Marc Canigueral [aut, cre, cph]
Maintainer: Marc Canigueral <marc.canigueral@udg.edu>
Diff between evprof versions 1.1.0 dated 2024-01-29 and 1.1.1 dated 2024-02-05
evprof-1.1.0/evprof/man/convert_time_dt_to_num.Rd |only evprof-1.1.0/evprof/man/convert_time_num_to_plot_num.Rd |only evprof-1.1.1/evprof/DESCRIPTION | 6 evprof-1.1.1/evprof/MD5 | 88 ++--- evprof-1.1.1/evprof/NAMESPACE | 1 evprof-1.1.1/evprof/NEWS.md | 6 evprof-1.1.1/evprof/R/clustering.R | 21 - evprof-1.1.1/evprof/R/data.R | 9 evprof-1.1.1/evprof/R/exploration.R | 93 +++--- evprof-1.1.1/evprof/R/modelling.R | 75 +---- evprof-1.1.1/evprof/R/preprocessing.R | 150 +++++----- evprof-1.1.1/evprof/data/california_GMM.rda |binary evprof-1.1.1/evprof/data/california_ev_sessions.rda |binary evprof-1.1.1/evprof/data/california_ev_sessions_profiles.rda |binary evprof-1.1.1/evprof/man/california_GMM.Rd | 9 evprof-1.1.1/evprof/man/choose_k_GMM.Rd | 10 evprof-1.1.1/evprof/man/cluster_sessions.Rd | 3 evprof-1.1.1/evprof/man/convert_time_dt_to_plot_dt.Rd | 1 evprof-1.1.1/evprof/man/convert_time_dt_to_plot_num.Rd | 1 evprof-1.1.1/evprof/man/convert_time_num_to_chr.Rd | 1 evprof-1.1.1/evprof/man/convert_time_num_to_period.Rd | 1 evprof-1.1.1/evprof/man/cut_sessions.Rd | 19 - evprof-1.1.1/evprof/man/detect_outliers.Rd | 11 evprof-1.1.1/evprof/man/divide_by_disconnection.Rd | 16 - evprof-1.1.1/evprof/man/divide_by_timecycle.Rd | 15 - evprof-1.1.1/evprof/man/drop_outliers.Rd | 14 evprof-1.1.1/evprof/man/get_connection_model_mclust_object.Rd | 3 evprof-1.1.1/evprof/man/get_dbscan_params.Rd | 3 evprof-1.1.1/evprof/man/get_energy_model_parameters.Rd | 4 evprof-1.1.1/evprof/man/get_energy_models.Rd | 52 --- evprof-1.1.1/evprof/man/mutate_to_log.Rd | 5 evprof-1.1.1/evprof/man/plot_bivarGMM.Rd | 3 evprof-1.1.1/evprof/man/plot_density_2D.Rd | 5 evprof-1.1.1/evprof/man/plot_density_3D.Rd | 8 evprof-1.1.1/evprof/man/plot_division_lines.Rd | 6 evprof-1.1.1/evprof/man/plot_kNNdist.Rd | 6 evprof-1.1.1/evprof/man/plot_model_clusters.Rd | 19 - evprof-1.1.1/evprof/man/plot_outliers.Rd | 20 - evprof-1.1.1/evprof/man/plot_points.Rd | 15 - evprof-1.1.1/evprof/man/round_to_half.Rd | 1 evprof-1.1.1/evprof/man/save_clustering_iterations.Rd | 3 evprof-1.1.1/evprof/tests/testthat/test-clustering.R | 15 - evprof-1.1.1/evprof/tests/testthat/test-exploration.R | 33 +- evprof-1.1.1/evprof/tests/testthat/test-modelling.R | 17 - evprof-1.1.1/evprof/tests/testthat/test-preprocessing.R | 30 -- evprof-1.1.1/evprof/tests/testthat/test-profiling.R | 12 46 files changed, 392 insertions(+), 418 deletions(-)
Title: Alternating Optimization
Description: Alternating optimization of (high-dimensional) functions is an
iterative procedure for optimizing jointly over all parameters by
alternately optimizing parameter subsets.
Author: Lennart Oelschlaeger [aut, cre]
Maintainer: Lennart Oelschlaeger <oelschlaeger.lennart@gmail.com>
Diff between ao versions 0.3.1 dated 2024-01-31 and 0.3.2 dated 2024-02-05
DESCRIPTION | 10 MD5 | 22 +- NEWS.md | 4 R/ao-package.R | 42 +-- R/ao.R | 513 +++++++++++++++++++++++------------------------ README.md | 30 +- build/vignette.rds |binary inst/doc/ao.Rmd | 138 ++++++------ inst/doc/ao.html | 24 +- man/ao-package.Rd | 51 ++-- tests/testthat/test-ao.R | 23 ++ vignettes/ao.Rmd | 138 ++++++------ 12 files changed, 511 insertions(+), 484 deletions(-)
Title: Fit Sparse Linear Regression Models via Nonconvex Optimization
Description: Efficient procedure for fitting regularization paths between L1 and L0, using the MC+ penalty of Zhang, C.H. (2010)<doi:10.1214/09-AOS729>. Implements the methodology described in Mazumder, Friedman and Hastie (2011) <DOI: 10.1198/jasa.2011.tm09738>. Sparsenet computes the regularization surface over both the family parameter and the tuning parameter by coordinate descent.
Author: Rahul Mazumder [aut, cre],
Trevor Hastie [aut, cre],
Jerome Friedman [aut, cre]
Maintainer: Trevor Hastie <hastie@stanford.edu>
Diff between sparsenet versions 1.5 dated 2023-08-21 and 1.6 dated 2024-02-05
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/cv.sparsenet.R | 9 +++++---- man/cv.sparsenet.Rd | 5 ++++- 4 files changed, 16 insertions(+), 12 deletions(-)
Title: Tools and Statistical Procedures in Plant Science
Description: The 'inti' package is part of the 'inkaverse' project for developing
different procedures and tools used in plant science and experimental designs.
The mean aim of the package is to support researchers during the planning of
experiments and data collection (tarpuy()), data analysis and graphics (yupana())
, and technical writing.
Learn more about the 'inkaverse' project at <https://inkaverse.com/>.
Author: Flavio Lozano-Isla [aut, cre] ,
QuipoLab [ctb],
Inkaverse [cph]
Maintainer: Flavio Lozano-Isla <flozanoisla@gmail.com>
Diff between inti versions 0.6.3 dated 2023-10-27 and 0.6.4 dated 2024-02-05
inti-0.6.3/inti/inst/tarpuy/www/bootstrap_sandstone.css |only inti-0.6.4/inti/DESCRIPTION | 14 - inti-0.6.4/inti/MD5 | 61 ++---- inti-0.6.4/inti/NEWS.md | 11 + inti-0.6.4/inti/R/figure2qmd.R | 43 ---- inti-0.6.4/inti/R/gdoc2qmd.R | 8 inti-0.6.4/inti/R/tarpuy_traits.R | 25 +- inti-0.6.4/inti/build/partial.rdb |binary inti-0.6.4/inti/build/vignette.rds |binary inti-0.6.4/inti/inst/doc/apps.Rmd | 1 inti-0.6.4/inti/inst/doc/apps.html | 8 inti-0.6.4/inti/inst/doc/heritability.html | 2 inti-0.6.4/inti/inst/doc/rticles.Rmd | 1 inti-0.6.4/inti/inst/doc/rticles.html | 101 +++++++++- inti-0.6.4/inti/inst/doc/tarpuy.Rmd | 1 inti-0.6.4/inti/inst/doc/tarpuy.html | 2 inti-0.6.4/inti/inst/doc/yupana.Rmd | 1 inti-0.6.4/inti/inst/doc/yupana.html | 2 inti-0.6.4/inti/inst/rmarkdown/templates/rticles/skeleton/files/style_unalm.docx |binary inti-0.6.4/inti/inst/tarpuy/rsconnect/shinyapps.io/flavjack/tarpuy-test.dcf | 8 inti-0.6.4/inti/inst/tarpuy/rsconnect/shinyapps.io/flavjack/tarpuy.dcf | 2 inti-0.6.4/inti/inst/tarpuy/server.R | 27 +- inti-0.6.4/inti/inst/tarpuy/ui.R | 77 ++++--- inti-0.6.4/inti/inst/yupana/rsconnect/shinyapps.io/flavjack/yupana-test.dcf | 8 inti-0.6.4/inti/inst/yupana/rsconnect/shinyapps.io/flavjack/yupana.dcf | 2 inti-0.6.4/inti/inst/yupana/server.R | 9 inti-0.6.4/inti/inst/yupana/ui.R | 100 ++++++--- inti-0.6.4/inti/man/tarpuy_traits.Rd | 8 inti-0.6.4/inti/vignettes/apps.Rmd | 1 inti-0.6.4/inti/vignettes/rticles.Rmd | 1 inti-0.6.4/inti/vignettes/tarpuy.Rmd | 1 inti-0.6.4/inti/vignettes/yupana.Rmd | 1 32 files changed, 330 insertions(+), 196 deletions(-)
Title: Visualization and Tools for Ichimoku Kinko Hyo Strategies
Description: An implementation of 'Ichimoku Kinko Hyo', also commonly known as
'cloud charts'. Static and interactive visualizations with tools for
creating, backtesting and development of quantitative 'ichimoku' strategies.
As described in Sasaki (1996, ISBN:4925152009), the technique is a refinement
on candlestick charting, originating from Japan and now in widespread use in
technical analysis worldwide. Translating as 'one-glance equilibrium chart',
it allows the price action and market structure of financial securities to
be determined 'at-a-glance'. Incorporates an interface with the OANDA
fxTrade API <https://developer.oanda.com/> for retrieving historical and
live streaming price data for major currencies, metals, commodities,
government bonds and stock indices.
Author: Charlie Gao [aut, cre] ,
Hibiki AI Limited [cph]
Maintainer: Charlie Gao <charlie.gao@shikokuchuo.net>
Diff between ichimoku versions 1.4.13 dated 2024-01-15 and 1.5.0 dated 2024-02-05
DESCRIPTION | 10 +++++----- MD5 | 24 ++++++++++++------------ NAMESPACE | 2 +- NEWS.md | 11 +++++++++++ R/archive.R | 41 +++++++++++++++++++---------------------- R/ichimoku-package.R | 11 +++++------ README.md | 2 +- inst/doc/reference.Rmd | 9 +++++---- inst/doc/reference.html | 22 +++++++++++----------- man/archive.Rd | 6 +++--- man/ichimoku-package.Rd | 9 +++++++++ tests/testthat/test-archive.R | 9 ++------- vignettes/reference.Rmd | 9 +++++---- 13 files changed, 89 insertions(+), 76 deletions(-)
Title: Discontinuous Regression and Image Processing
Description: A collection of functions that perform jump regression
and image analysis such as denoising, deblurring and
jump detection.
Author: Yicheng Kang [aut, cre],
Peihua Qiu [aut, ctb]
Maintainer: Yicheng Kang <kangyicheng0527@gmail.com>
Diff between DRIP versions 1.8 dated 2023-09-01 and 1.9 dated 2024-02-05
DRIP-1.8/DRIP/src/registerDynamicSymbol.c |only DRIP-1.9/DRIP/DESCRIPTION | 25 ++-- DRIP-1.9/DRIP/MD5 | 84 ++++++++-------- DRIP-1.9/DRIP/NAMESPACE | 6 - DRIP-1.9/DRIP/R/JPLLK_surface.r | 58 +++++------ DRIP-1.9/DRIP/R/cv.jpex.R | 4 DRIP-1.9/DRIP/R/dKQ.r | 6 - DRIP-1.9/DRIP/R/diffLC2K.r | 33 +++--- DRIP-1.9/DRIP/R/diffLCK.r | 33 +++--- DRIP-1.9/DRIP/R/diffLL2K.r | 35 +++--- DRIP-1.9/DRIP/R/diffLLK.r | 35 +++--- DRIP-1.9/DRIP/R/jpex.R | 4 DRIP-1.9/DRIP/R/modify1.r | 39 +++---- DRIP-1.9/DRIP/R/modify2.r | 24 ++-- DRIP-1.9/DRIP/R/roofDiff.r | 26 ++--- DRIP-1.9/DRIP/R/roofEdge.r | 46 ++++----- DRIP-1.9/DRIP/R/roofEdgeParSel.r | 116 +++++++++++----------- DRIP-1.9/DRIP/R/stepEdgeLC2K.r | 34 +++--- DRIP-1.9/DRIP/R/stepEdgeLCK.r | 31 +++--- DRIP-1.9/DRIP/R/stepEdgeLL2K.r | 35 +++--- DRIP-1.9/DRIP/R/stepEdgeLLK.r | 34 +++--- DRIP-1.9/DRIP/R/stepEdgeParSelLC2K.r | 148 ++++++++++++++--------------- DRIP-1.9/DRIP/R/stepEdgeParSelLCK.r | 148 ++++++++++++++--------------- DRIP-1.9/DRIP/R/stepEdgeParSelLL2K.r | 148 ++++++++++++++--------------- DRIP-1.9/DRIP/R/stepEdgeParSelLLK.r | 148 ++++++++++++++--------------- DRIP-1.9/DRIP/R/surfaceCluster.r | 56 +++++----- DRIP-1.9/DRIP/R/surfaceCluster_bandwidth.r | 74 +++++++------- DRIP-1.9/DRIP/R/threeStage.r | 52 +++++----- DRIP-1.9/DRIP/R/threeStageParSel.r | 72 +++++++------- DRIP-1.9/DRIP/data/brain.RData |binary DRIP-1.9/DRIP/data/circles.RData |binary DRIP-1.9/DRIP/data/kid.RData |binary DRIP-1.9/DRIP/data/sar.RData |binary DRIP-1.9/DRIP/man/roofDiff.Rd | 2 DRIP-1.9/DRIP/src/JPEX0.c | 24 ++-- DRIP-1.9/DRIP/src/LOOCV.c | 2 DRIP-1.9/DRIP/src/Makevars | 2 DRIP-1.9/DRIP/src/extend.f90 | 2 DRIP-1.9/DRIP/src/extend_c.c | 2 DRIP-1.9/DRIP/src/functions.h | 58 +++++++++++ DRIP-1.9/DRIP/src/init.c |only DRIP-1.9/DRIP/src/ker_c.c | 2 DRIP-1.9/DRIP/src/modify1.f90 | 4 DRIP-1.9/DRIP/src/modify2.f90 | 2 44 files changed, 875 insertions(+), 779 deletions(-)
Title: Multivariate Nonparametric Cramer-Test for the
Two-Sample-Problem
Description: Provides R routine for the so called two-sample
Cramer-Test. This nonparametric two-sample-test on equality
of the underlying distributions can be applied to
multivariate data as well as univariate data. It offers two
possibilities to approximate the critical value both of which
are included in this package.
Author: Carsten Franz <carsten.franz@gmail.com>
Maintainer: Carsten Franz <carsten.franz@gmail.com>
Diff between cramer versions 0.9-3 dated 2019-01-05 and 0.9-4 dated 2024-02-05
CHANGES | 6 + DESCRIPTION | 14 ++- MD5 | 14 ++- NAMESPACE | 10 +- R/RcppExports.R |only R/cramer.R | 212 ++++++++++++++++++++++++++++++++++++----------- man/cramer-package.Rd | 225 ++------------------------------------------------ man/cramer.test.Rd |only src |only 9 files changed, 205 insertions(+), 276 deletions(-)
Title: Antarctic Spatial Data Manipulation
Description: Loads and creates spatial data, including layers and tools that are relevant
to the activities of the Commission for the Conservation of Antarctic Marine Living
Resources. Provides two categories of functions: load functions and create functions.
Load functions are used to import existing spatial layers from the online CCAMLR GIS
such as the ASD boundaries. Create functions are used to create layers from user data
such as polygons and grids.
Author: Stephane Thanassekos [aut, cre],
Keith Reid [aut],
Lucy Robinson [aut],
Michael D. Sumner [ctb],
Roger Bivand [ctb]
Maintainer: Stephane Thanassekos <stephane.thanassekos@ccamlr.org>
Diff between CCAMLRGIS versions 4.0.6 dated 2023-09-27 and 4.0.7 dated 2024-02-05
DESCRIPTION | 10 - MD5 | 30 +-- NEWS.md | 7 R/Clip2Coast.R | 6 R/add_labels.R | 14 - R/create.R | 2 R/load.R | 25 +-- README.md | 377 +++-------------------------------------------- build/vignette.rds |binary inst/doc/CCAMLRGIS.html | 4 man/CCAMLRGIS-package.Rd | 1 man/Clip2Coast.Rd | 6 man/SmallBathy.Rd | 4 man/create_PolyGrids.Rd | 2 man/load_Bathy.Rd | 10 - man/load_Coastline.Rd | 7 16 files changed, 107 insertions(+), 398 deletions(-)
Title: Bayesian Mode Inference
Description: A Bayesian approach for mode inference which works in two steps. First, a mixture distribution is
fitted on the data using a sparse finite mixture (SFM) Markov chain Monte Carlo
(MCMC) algorithm following Malsiner-Walli, Frühwirth-Schnatter and Grün (2016)
<doi:10.1007/s11222-014-9500-2>). The number of mixture components does not have
to be known; the size of the mixture is estimated endogenously through the SFM
approach. Second, the modes of the estimated mixture at each MCMC draw are retrieved
using algorithms specifically tailored for mode detection. These estimates are then
used to construct posterior probabilities for the number of modes, their locations
and uncertainties, providing a powerful tool for mode inference.
Author: Nalan Bastuerk [aut],
Jamie Cross [aut],
Peter de Knijff [aut],
Lennart Hoogerheide [aut],
Paul Labonne [aut, cre],
Herman van Dijk [aut]
Maintainer: Paul Labonne <paul.labonne@bi.no>
Diff between BayesMultiMode versions 0.6.0 dated 2023-08-08 and 0.7.0 dated 2024-02-05
BayesMultiMode-0.6.0/BayesMultiMode/R/MEM.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/bayes_estimation.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/discrete_MF.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/fixed_point.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/ggplot_theme.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/gibbs_SFM_normal.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/gibbs_SFM_poisson.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/gibbs_SFM_skew_normal.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/gibbs_SFM_sp.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/new_BayesMixture.R |only BayesMultiMode-0.6.0/BayesMultiMode/R/sfm_step.R |only BayesMultiMode-0.6.0/BayesMultiMode/man/MEM.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/bayes_estimation.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/discrete_MF.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/fixed_point.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/gibbs_SFM_normal.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/gibbs_SFM_poisson.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/gibbs_SFM_skew_n.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/gibbs_SFM_sp.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/new_BayesMixture.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/plot.BayesMixture.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/plot.BayesMode.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/man/summary.BayesMode.Rd |only BayesMultiMode-0.6.0/BayesMultiMode/tests/testthat/test-MEM.R |only BayesMultiMode-0.6.0/BayesMultiMode/tests/testthat/test-discrete_MF.R |only BayesMultiMode-0.6.0/BayesMultiMode/tests/testthat/test-fixed_point.R |only BayesMultiMode-0.6.0/BayesMultiMode/tests/testthat/test-new_BayesMixture.R |only BayesMultiMode-0.7.0/BayesMultiMode/DESCRIPTION | 10 BayesMultiMode-0.7.0/BayesMultiMode/MD5 | 88 +- BayesMultiMode-0.7.0/BayesMultiMode/NAMESPACE | 32 BayesMultiMode-0.7.0/BayesMultiMode/NEWS.md | 10 BayesMultiMode-0.7.0/BayesMultiMode/R/bayes_fit.R |only BayesMultiMode-0.7.0/BayesMultiMode/R/bayes_mixture.R |only BayesMultiMode-0.7.0/BayesMultiMode/R/bayes_mode.R | 284 +++---- BayesMultiMode-0.7.0/BayesMultiMode/R/bayes_trace.R | 10 BayesMultiMode-0.7.0/BayesMultiMode/R/gibbs_sfm_algos.R |only BayesMultiMode-0.7.0/BayesMultiMode/R/mix_mode.R |only BayesMultiMode-0.7.0/BayesMultiMode/R/mixture.R |only BayesMultiMode-0.7.0/BayesMultiMode/R/mixture_functions.R | 174 ++-- BayesMultiMode-0.7.0/BayesMultiMode/R/plot_methods.R | 377 ++++++---- BayesMultiMode-0.7.0/BayesMultiMode/R/print_methods.R |only BayesMultiMode-0.7.0/BayesMultiMode/R/summary_methods.R | 87 ++ BayesMultiMode-0.7.0/BayesMultiMode/README.md | 147 +-- BayesMultiMode-0.7.0/BayesMultiMode/build/partial.rdb |binary BayesMultiMode-0.7.0/BayesMultiMode/inst/REFERENCES.bib | 18 BayesMultiMode-0.7.0/BayesMultiMode/man/bayes_fit.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/bayes_mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/bayes_mode.Rd | 101 +- BayesMultiMode-0.7.0/BayesMultiMode/man/bayes_trace.Rd | 10 BayesMultiMode-0.7.0/BayesMultiMode/man/figures/README-unnamed-chunk-11-1.png |binary BayesMultiMode-0.7.0/BayesMultiMode/man/figures/README-unnamed-chunk-12-1.png |only BayesMultiMode-0.7.0/BayesMultiMode/man/figures/README-unnamed-chunk-6-1.png |binary BayesMultiMode-0.7.0/BayesMultiMode/man/gibbs_SFM.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/mix_mode.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/plot.bayes_mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/plot.bayes_mode.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/plot.mix_mode.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/plot.mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/print.bayes_mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/print.bayes_mode.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/print.mix_mode.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/print.mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/summary.bayes_mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/summary.bayes_mode.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/summary.mix_mode.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/man/summary.mixture.Rd |only BayesMultiMode-0.7.0/BayesMultiMode/tests/testthat/_snaps |only BayesMultiMode-0.7.0/BayesMultiMode/tests/testthat/test-bayes_mixture.R |only BayesMultiMode-0.7.0/BayesMultiMode/tests/testthat/test-bayes_mode.R | 135 +++ BayesMultiMode-0.7.0/BayesMultiMode/tests/testthat/test-mix_mode.R |only BayesMultiMode-0.7.0/BayesMultiMode/tests/testthat/test-mixture.R |only 72 files changed, 919 insertions(+), 564 deletions(-)
More information about BayesMultiMode at CRAN
Permanent link
More information about dominanceanalysis at CRAN
Permanent link
Title: Functions for Wind Resource Assessment
Description: A collection of functions to analyse, visualize and interpret wind data
and to calculate the potential energy production of wind turbines.
Author: Christian Graul and Carsten Poppinga
Maintainer: Christian Graul <christian.graul@gmail.com>
Diff between bReeze versions 0.4-3 dated 2018-11-14 and 0.4-4 dated 2024-02-05
DESCRIPTION | 8 +++--- LICENSE | 2 - MD5 | 56 ++++++++++++++++++++++++------------------------ R/aep.R | 4 +-- R/availability.R | 2 - R/clean.R | 6 ++--- R/day.plot.R | 2 - R/energy.R | 2 - R/frequency.R | 2 - R/map.plot.R | 2 - R/mast.R | 2 - R/month.stats.R | 2 - R/polar.plot.R | 2 - R/turb.iec.plot.R | 2 - R/turbulence.R | 2 - R/uncertainty.R | 2 - R/weibull.R | 2 - R/windprofile.R | 2 - data/winddata.rda |binary inst/CITATION | 10 ++++---- inst/NEWS | 11 +++++++++ man/aep.int.Rd | 3 -- man/availability.int.Rd | 10 ++------ man/clean.int.Rd | 3 -- man/energy.int.Rd | 3 -- man/month.stats.int.Rd | 3 -- man/pc.Rd | 6 +++-- man/subset.int.Rd | 3 -- man/weibull.int.Rd | 3 -- 29 files changed, 80 insertions(+), 77 deletions(-)
Title: Graph-Based Permutation Tests for Microbiome Data
Description: Provides functions for graph-based multiple-sample
testing and visualization of microbiome data, in particular data
stored in 'phyloseq' objects. The tests are based on those
described in Friedman and Rafsky (1979)
<http://www.jstor.org/stable/2958919>, and the tests are described
in more detail in Callahan et al. (2016)
<doi:10.12688/f1000research.8986.1>.
Author: Julia Fukuyama [aut, cre]
Maintainer: Julia Fukuyama <julia.fukuyama@gmail.com>
Diff between phyloseqGraphTest versions 0.1.0 dated 2020-02-07 and 0.1.1 dated 2024-02-05
DESCRIPTION | 11 - MD5 | 17 - R/graphtest-functions.R | 242 ++++++++++++++++++++++ build/vignette.rds |binary inst/doc/gt_vignette.R | 2 inst/doc/gt_vignette.html | 425 +++++++++++++++++++++------------------ man/format_fortify.Rd |only man/graph_perm_test.Rd | 16 + man/new_fortify.igraph.Rd |only man/phyloseqGraphTest-package.Rd | 2 man/scale_safely.Rd |only 11 files changed, 504 insertions(+), 211 deletions(-)
More information about phyloseqGraphTest at CRAN
Permanent link
Title: Plastome Assembly Coverage Visualization
Description: Visualizes the coverage depth of a complete plastid genome as well as the equality of its inverted repeat regions in relation to the circular, quadripartite genome structure and the location of individual genes. For more information, please see Gruenstaeudl and Jenke (2020) <doi:10.1186/s12859-020-3475-0>.
Author: Gregory Smith [ctb],
Nils Jenke [ctb],
Michael Gruenstaeudl [aut, cre]
Maintainer: Michael Gruenstaeudl <m_gruenstaeudl@fhsu.edu>
Diff between PACVr versions 1.0.6 dated 2024-01-08 and 1.0.7 dated 2024-02-05
PACVr-1.0.6/PACVr/inst/extdata/NC_045072/NC_045072.gb.new |only PACVr-1.0.6/PACVr/inst/extdata/NC_045072/NC_045072_PlastomeReadsOnly.sorted.bam |only PACVr-1.0.6/PACVr/inst/extdata/NC_045072/NC_045072_PlastomeReadsOnly.sorted.bam.bai |only PACVr-1.0.7/PACVr/DESCRIPTION | 23 PACVr-1.0.7/PACVr/MD5 | 43 PACVr-1.0.7/PACVr/NAMESPACE | 16 PACVr-1.0.7/PACVr/R/IRoperations.R | 328 +- PACVr-1.0.7/PACVr/R/PACVr-package.R |only PACVr-1.0.7/PACVr/R/PACVr.R | 489 ++-- PACVr-1.0.7/PACVr/R/customizedRCircos.R | 1096 +++++----- PACVr-1.0.7/PACVr/R/customizedRead.gb.R |only PACVr-1.0.7/PACVr/R/generatePlotData.R | 94 PACVr-1.0.7/PACVr/R/helpers.R | 664 +++--- PACVr-1.0.7/PACVr/R/parseData.R | 82 PACVr-1.0.7/PACVr/R/quadripartiteOperations.R | 375 +-- PACVr-1.0.7/PACVr/R/visualizeWithRCircos.R | 435 +-- PACVr-1.0.7/PACVr/build/partial.rdb |only PACVr-1.0.7/PACVr/inst/doc/PACVr_Vignette.Rnw | 20 PACVr-1.0.7/PACVr/inst/doc/PACVr_Vignette.pdf |binary PACVr-1.0.7/PACVr/inst/extdata/MG936619 |only PACVr-1.0.7/PACVr/inst/extdata/NC_045072/NC_045072_subsampled.bam |only PACVr-1.0.7/PACVr/inst/extdata/PACVr_Rscript.R | 30 PACVr-1.0.7/PACVr/inst/extdata/README_USAGE |only PACVr-1.0.7/PACVr/man/PACVr-package.Rd | 38 PACVr-1.0.7/PACVr/man/PACVr.complete.Rd | 90 PACVr-1.0.7/PACVr/vignettes/PACVr_Vignette.Rnw | 20 26 files changed, 2029 insertions(+), 1814 deletions(-)
Title: NeuroAnatomy Toolbox for Analysis of 3D Image Data
Description: NeuroAnatomy Toolbox (nat) enables analysis and visualisation of 3D
biological image data, especially traced neurons. Reads and writes 3D images
in NRRD and 'Amira' AmiraMesh formats and reads surfaces in 'Amira' hxsurf
format. Traced neurons can be imported from and written to SWC and 'Amira'
LineSet and SkeletonGraph formats. These data can then be visualised in 3D
via 'rgl', manipulated including applying calculated registrations, e.g.
using the 'CMTK' registration suite, and analysed. There is also a simple
representation for neurons that have been subjected to 3D skeletonisation
but not formally traced; this allows morphological comparison between
neurons including searches and clustering (via the 'nat.nblast' extension
package).
Author: Gregory Jefferis [aut, cre] ,
James Manton [aut] ,
Dominik Krzeminski [ctb]
Maintainer: Gregory Jefferis <jefferis@gmail.com>
Diff between nat versions 1.8.23 dated 2023-08-25 and 1.8.24 dated 2024-02-05
DESCRIPTION | 6 +-- MD5 | 71 ++++++++++++++++++++--------------------- NAMESPACE | 23 ++++++------- NEWS | 8 ++++ R/cmtk.R | 2 - R/graph-nodes.R | 6 +-- R/hxsurf.R | 2 - R/im3d.R | 14 ++++---- R/nat-package.R | 4 +- R/neuron.R | 36 ++++++++++---------- R/neuronlistfh.R | 2 - R/ngraph.R | 74 ++++++++++++++++++++++--------------------- R/seglist.R | 10 ++--- R/summary.R | 12 +++--- R/xform.R | 11 +++++- build/partial.rdb |binary build/vignette.rds |binary inst/doc/Installation.html | 4 +- inst/doc/neurons-intro.html | 10 ++--- man/clampmax.Rd | 10 ++--- man/cmtk.call.Rd | 2 - man/image.im3d.Rd | 2 - man/nat-package.Rd | 4 +- man/neuron.Rd | 4 +- man/neuronlistfh.Rd | 2 - man/ngraph.Rd | 10 ++--- man/normalise_swc.Rd | 8 ++-- man/nvertices.Rd | 3 + man/read.hxsurf.Rd | 2 - man/seglengths.Rd | 2 - man/spine.Rd | 6 +-- man/subset.neuron.Rd | 4 +- man/summary.neuron.Rd | 12 +++--- tests/testthat/Rplots.pdf |only tests/testthat/test-cmtk.R | 47 +++++++++++++-------------- tests/testthat/test-neuron.R | 2 - tests/testthat/test-ngraph.R | 12 +++--- 37 files changed, 224 insertions(+), 203 deletions(-)
Title: Miscellaneous Functions 'T. Yanagida'
Description: Miscellaneous functions for (1) data management (e.g., grand-mean and group-mean centering, coding variables and reverse coding items, scale and cluster scores, reading and writing Excel and SPSS files), (2) descriptive statistics (e.g., frequency table, cross tabulation, effect size measures), (3) missing data (e.g., descriptive statistics for missing data, missing data pattern, Little's test of Missing Completely at Random, and auxiliary variable analysis), (4) multilevel data (e.g., multilevel descriptive statistics, within-group and between-group correlation matrix, multilevel confirmatory factor analysis, level-specific fit indices, cross-level measurement equivalence evaluation, multilevel composite reliability, and multilevel R-squared measures), (5) item analysis (e.g., confirmatory factor analysis, coefficient alpha and omega, between-group and longitudinal measurement equivalence evaluation), and (6) statistical analysis (e.g., confidence intervals, collinearity and residual [...truncated...]
Author: Takuya Yanagida [aut, cre]
Maintainer: Takuya Yanagida <takuya.yanagida@univie.ac.at>
Diff between misty versions 0.6.1 dated 2024-01-19 and 0.6.2 dated 2024-02-05
DESCRIPTION | 8 +-- MD5 | 34 +++++++------- NEWS.md | 29 ++++++++++-- R/descript.R | 4 - R/freq.R | 6 -- R/item.invar.R | 14 +++--- R/multilevel.descript.R | 105 +++++++++++++++++++++++++++------------------ R/read.mplus.R | 56 ++++++++++++------------ R/utils.R | 22 +-------- R/write.result.R | 5 -- R/write.sav.R | 71 ++++++++++++------------------ man/descript.Rd | 2 man/item.invar.Rd | 3 - man/item.omega.Rd | 3 - man/multilevel.cor.Rd | 3 - man/multilevel.descript.Rd | 9 ++- man/na.auxiliary.Rd | 4 - man/read.mplus.Rd | 10 +++- 18 files changed, 204 insertions(+), 184 deletions(-)
Title: Utility Functions for Forest Inventory Estimation and Analysis
Description: A set of tools for data wrangling, spatial data analysis,
statistical modeling (including direct, model-assisted, photo-based, and
small area tools), and USDA Forest Service data base tools. These tools are
aimed to help Foresters, Analysts, and Scientists extract and perform
analyses on USDA Forest Service data.
Author: Tracey Frescino [aut],
Chris Toney [aut],
Grayson White [aut, cre],
Joshua Yamamoto [aut]
Maintainer: Grayson White <graysonwhite13@gmail.com>
Diff between FIESTAutils versions 1.2.1 dated 2024-01-19 and 1.2.2 dated 2024-02-05
DESCRIPTION | 10 +++--- MD5 | 14 ++++----- NAMESPACE | 1 R/cool_functions.R | 4 +- R/table_functions.R | 77 ++++++++++++++++++++++++++++++++++++++++----------- data/ref_codes.rda |binary data/ref_estvar.rda |binary man/internal_desc.Rd | 2 - 8 files changed, 77 insertions(+), 31 deletions(-)
Title: Bayesian Regularized Quantile Mixed Model for G - E Interactions
Description: In longitudinal studies, the same subjects are measured repeatedly over time, leading to correlations among the repeated measurements. Properly accounting for the intra-cluster correlations in the presence of data heterogeneity and long tailed distributions of the disease phenotype is challenging, especially in the context of high dimensional regressions. Here, we aim at developing novel Bayesian regularized quantile mixed effect models to tackle these challenges. We have proposed a Bayesian variable selection in the mixed effect models for longitudinal genomics studies. To dissect important gene - environment interactions, our model can simultaneously identify important main and interaction effects on the individual and group level, which have been facilitated by imposing the spike- and -slab priors through Laplacian shrinkage in the Bayesian quantile hierarchical models. The within - subject dependence among data can be accommodated by incorporating the random effects. An efficient G [...truncated...]
Author: Kun Fan [aut, cre],
Cen Wu [aut]
Maintainer: Kun Fan <kfan@ksu.edu>
Diff between mixedBayes versions 0.1.0 dated 2023-04-27 and 0.1.1 dated 2024-02-05
DESCRIPTION | 10 +- MD5 | 26 ++--- R/LONBGLSS.R | 98 +++++++++---------- R/LONRBGLSS1.R | 112 +++++++++++----------- R/data.R | 8 - R/mixedBayes-package.R | 6 - R/mixedBayes.R | 22 ++-- R/selection.R | 4 build/partial.rdb |binary data/data.rda |binary man/data.Rd | 8 - man/mixedBayes-package.Rd | 6 - man/mixedBayes.Rd | 226 +++++++++++++++++++++++----------------------- man/selection.Rd | 4 14 files changed, 265 insertions(+), 265 deletions(-)
Title: Create Tidy Data Frames of Marginal Effects for 'ggplot' from
Model Outputs
Description: Compute marginal effects and adjusted predictions from statistical
models and returns the result as tidy data frames. These data frames are
ready to use with the 'ggplot2'-package. Effects and predictions can be
calculated for many different models. Interaction terms, splines and
polynomial terms are also supported. The main functions are ggpredict(),
ggemmeans() and ggeffect(). There is a generic plot()-method to plot the
results using 'ggplot2'.
Author: Daniel Luedecke [aut, cre] ,
Frederik Aust [ctb] ,
Sam Crawley [ctb] ,
Mattan S. Ben-Shachar [ctb] ,
Sean C. Anderson [ctb]
Maintainer: Daniel Luedecke <d.luedecke@uke.de>
Diff between ggeffects versions 1.3.4 dated 2023-12-18 and 1.4.0 dated 2024-02-05
DESCRIPTION | 14 MD5 | 76 NAMESPACE | 8 NEWS.md | 36 R/format.R |only R/get_predictions_glmmTMB.R | 2 R/get_predictions_vglm.R | 8 R/ggpredict.R | 40 R/hypothesis_test.R | 243 ++ R/new_data.R | 2 R/predictions.R | 2 R/print.R | 502 +++--- R/utils.R | 23 R/utils_model_function.R | 160 - README.md | 204 +- inst/doc/content.Rmd | 3 inst/doc/content.html | 10 man/efc.Rd | 42 man/fish.Rd | 20 man/hypothesis_test.Rd | 34 man/lung2.Rd | 24 man/new_data.Rd | 3 man/print.Rd |only man/reexports.Rd |only tests/testthat/_snaps/avg_predictions.md | 88 - tests/testthat/_snaps/list_terms.md | 58 tests/testthat/_snaps/print.md | 1401 ++++++++++++----- tests/testthat/_snaps/print_digits.md | 74 tests/testthat/_snaps/print_hypothesis_test-ordinal.md | 78 tests/testthat/_snaps/print_hypothesis_test.md | 328 +-- tests/testthat/_snaps/print_subsets.md | 44 tests/testthat/_snaps/simulate.md | 13 tests/testthat/test-format.R |only tests/testthat/test-linear-models.R | 99 - tests/testthat/test-parsnip.R | 105 - tests/testthat/test-print.R | 230 +- tests/testthat/test-print_digits.R | 7 tests/testthat/test-print_hypothesis_test-ordinal.R | 14 tests/testthat/test-print_hypothesis_test.R | 22 tests/testthat/test-vglm.R | 19 vignettes/content.Rmd | 3 41 files changed, 2486 insertions(+), 1553 deletions(-)
Title: Functions for the Detection of Spatial Clusters of Diseases
Description: A set of functions for the detection of spatial clusters
of disease using count data. Bootstrap is used to estimate
sampling distributions of statistics.
Author: Virgilio Gomez-Rubio, Juan Ferrandiz-Ferragud and Antonio
Lopez-Quilez, with contributions by Roger Bivand.
Maintainer: Virgilio Gomez-Rubio <Virgilio.Gomez@uclm.es>
Diff between DCluster versions 0.2-9 dated 2023-09-03 and 0.2-10 dated 2024-02-05
DESCRIPTION | 10 ++++++---- MD5 | 11 ++++++++--- NAMESPACE | 5 +++++ R/readSplus.R |only R/sp2WB.R |only inst/share |only man/DCluster.Rd | 4 ++-- man/readSplus.Rd |only man/sp2WB.Rd |only 9 files changed, 21 insertions(+), 9 deletions(-)
Title: R Functions to Download and Clean Brazilian Electoral Data
Description: Offers a set of functions to easily download and clean
Brazilian electoral data from the Superior Electoral Court website.
Among others, the package retrieves data on local and
federal elections for all positions (city councilor, mayor, state deputy,
federal deputy, governor, and president) aggregated by
state, city, and electoral zones.
Author: Denisson Silva [aut, cre],
Fernando Meireles [aut],
Beatriz Costa [ctb]
Maintainer: Denisson Silva <denissoncsol@gmail.com>
Diff between electionsBR versions 0.3.2 dated 2021-01-30 and 0.4.0 dated 2024-02-05
electionsBR-0.3.2/electionsBR/R/voter_affiliation.R |only electionsBR-0.3.2/electionsBR/man/voter_affiliation.Rd |only electionsBR-0.4.0/electionsBR/DESCRIPTION | 12 electionsBR-0.4.0/electionsBR/MD5 | 134 - electionsBR-0.4.0/electionsBR/NAMESPACE | 54 electionsBR-0.4.0/electionsBR/NEWS.md | 122 - electionsBR-0.4.0/electionsBR/R/candidate.R |only electionsBR-0.4.0/electionsBR/R/candidate_fed.R | 223 - electionsBR-0.4.0/electionsBR/R/candidate_local.R | 205 - electionsBR-0.4.0/electionsBR/R/details_mun_zone.R |only electionsBR-0.4.0/electionsBR/R/details_mun_zone_fed.R | 207 - electionsBR-0.4.0/electionsBR/R/details_mun_zone_local.R | 178 - electionsBR-0.4.0/electionsBR/R/electionsBR.R | 24 electionsBR-0.4.0/electionsBR/R/elections_cepesp.R |only electionsBR-0.4.0/electionsBR/R/elections_tse.R |only electionsBR-0.4.0/electionsBR/R/electionsbr_rda.R | 79 electionsBR-0.4.0/electionsBR/R/legend_fed.R | 183 - electionsBR-0.4.0/electionsBR/R/legend_local.R | 160 - electionsBR-0.4.0/electionsBR/R/legends.R |only electionsBR-0.4.0/electionsBR/R/party_mun_zone.R |only electionsBR-0.4.0/electionsBR/R/party_mun_zone_fed.R | 189 - electionsBR-0.4.0/electionsBR/R/party_mun_zone_local.R | 170 - electionsBR-0.4.0/electionsBR/R/personal_finances.R |only electionsBR-0.4.0/electionsBR/R/personal_finances_fed.R | 173 - electionsBR-0.4.0/electionsBR/R/personal_finances_local.R | 146 - electionsBR-0.4.0/electionsBR/R/pipe.R | 16 electionsBR-0.4.0/electionsBR/R/seats.R |only electionsBR-0.4.0/electionsBR/R/seats_fed.R | 165 - electionsBR-0.4.0/electionsBR/R/seats_local.R | 152 - electionsBR-0.4.0/electionsBR/R/social_media.R |only electionsBR-0.4.0/electionsBR/R/utils.R | 481 ++-- electionsBR-0.4.0/electionsBR/R/vote_mun_zone.R |only electionsBR-0.4.0/electionsBR/R/vote_mun_zone_fed.R | 213 - electionsBR-0.4.0/electionsBR/R/vote_mun_zone_local.R | 211 - electionsBR-0.4.0/electionsBR/R/vote_section.R |only electionsBR-0.4.0/electionsBR/R/vote_section_fed.R | 158 - electionsBR-0.4.0/electionsBR/R/vote_section_local.R | 209 - electionsBR-0.4.0/electionsBR/R/voter_profile.R | 186 - electionsBR-0.4.0/electionsBR/R/voter_profile_by_section.R | 210 - electionsBR-0.4.0/electionsBR/README.md | 167 - electionsBR-0.4.0/electionsBR/build/vignette.rds |binary electionsBR-0.4.0/electionsBR/inst/CITATION | 25 electionsBR-0.4.0/electionsBR/inst/doc/introduction.R | 143 - electionsBR-0.4.0/electionsBR/inst/doc/introduction.Rmd | 438 +-- electionsBR-0.4.0/electionsBR/inst/doc/introduction.html | 1143 +++++----- electionsBR-0.4.0/electionsBR/man/candidate.Rd |only electionsBR-0.4.0/electionsBR/man/candidate_fed.Rd | 181 - electionsBR-0.4.0/electionsBR/man/candidate_local.Rd | 145 - electionsBR-0.4.0/electionsBR/man/details_mun_zone.Rd |only electionsBR-0.4.0/electionsBR/man/details_mun_zone_fed.Rd | 151 - electionsBR-0.4.0/electionsBR/man/details_mun_zone_local.Rd | 125 - electionsBR-0.4.0/electionsBR/man/electionsBR-package.Rd | 56 electionsBR-0.4.0/electionsBR/man/elections_cepesp.Rd |only electionsBR-0.4.0/electionsBR/man/elections_rda.Rd | 56 electionsBR-0.4.0/electionsBR/man/elections_tse.Rd |only electionsBR-0.4.0/electionsBR/man/legend_fed.Rd | 132 - electionsBR-0.4.0/electionsBR/man/legend_local.Rd | 110 electionsBR-0.4.0/electionsBR/man/legends.Rd |only electionsBR-0.4.0/electionsBR/man/parties_br.Rd | 31 electionsBR-0.4.0/electionsBR/man/party_mun_zone.Rd |only electionsBR-0.4.0/electionsBR/man/party_mun_zone_fed.Rd | 145 - electionsBR-0.4.0/electionsBR/man/party_mun_zone_local.Rd | 120 - electionsBR-0.4.0/electionsBR/man/personal_finances.Rd |only electionsBR-0.4.0/electionsBR/man/personal_finances_fed.Rd | 129 - electionsBR-0.4.0/electionsBR/man/personal_finances_local.Rd | 103 electionsBR-0.4.0/electionsBR/man/pipe.Rd | 24 electionsBR-0.4.0/electionsBR/man/seats.Rd |only electionsBR-0.4.0/electionsBR/man/seats_fed.Rd | 123 - electionsBR-0.4.0/electionsBR/man/seats_local.Rd | 108 electionsBR-0.4.0/electionsBR/man/social_media.Rd |only electionsBR-0.4.0/electionsBR/man/uf_br.Rd | 22 electionsBR-0.4.0/electionsBR/man/vote_mun_zone.Rd |only electionsBR-0.4.0/electionsBR/man/vote_mun_zone_fed.Rd | 153 - electionsBR-0.4.0/electionsBR/man/vote_mun_zone_local.Rd | 168 - electionsBR-0.4.0/electionsBR/man/vote_section.Rd |only electionsBR-0.4.0/electionsBR/man/vote_section_fed.Rd | 113 electionsBR-0.4.0/electionsBR/man/vote_section_local.Rd | 113 electionsBR-0.4.0/electionsBR/man/voter_profile.Rd | 91 electionsBR-0.4.0/electionsBR/man/voter_profile_by_section.Rd | 50 electionsBR-0.4.0/electionsBR/vignettes/introduction.Rmd | 438 +-- 80 files changed, 3515 insertions(+), 5548 deletions(-)
Title: Clusterwise Independent Component Analysis
Description: Clustering multi-subject resting state functional Magnetic Resonance Imaging data. This methods enables the clustering of subjects based on multi-subject resting state functional Magnetic Resonance Imaging data. Objects are clustered based on similarities and differences in cluster-specific estimated components obtained by Independent Component Analysis.
Author: Jeffrey Durieux [aut, cre], Tom Wilderjans [aut], Juan Claramunt Gonzalez [ctb]
Maintainer: Jeffrey Durieux <durieux.jeffrey@gmail.com>
Diff between CICA versions 1.0.1 dated 2023-07-17 and 1.0.2 dated 2024-02-05
DESCRIPTION | 10 +- MD5 | 6 - R/SearchEmptyClusters.R | 160 ++++++++++++++++++++++----------------------- man/SearchEmptyClusters.Rd | 6 - 4 files changed, 91 insertions(+), 91 deletions(-)
Title: Build SVG Custom User Interface
Description: Render SVG as interactive figures to display contextual
information, with selectable and clickable user interface elements.
These figures can be seamlessly integrated into 'rmarkdown' and 'Quarto'
documents, as well as 'shiny' applications, allowing manipulation of elements
and reporting actions performed on them.
Additional features include pan, zoom in/out functionality, and the ability
to export the figures in SVG or PNG formats.
Author: Patrice Godard [aut, cre, cph]
Maintainer: Patrice Godard <patrice.godard@gmail.com>
Diff between bscui versions 0.1.2 dated 2024-01-11 and 0.1.3 dated 2024-02-05
DESCRIPTION | 8 +- MD5 | 18 +++--- build/vignette.rds |binary inst/doc/bscui.R | 3 + inst/doc/bscui.Rmd | 17 ++++- inst/doc/bscui.html | 70 ++++++++++++++---------- inst/examples/uniprot_cellular_locations.txt.gz |binary inst/htmlwidgets/bscui.js | 6 ++ inst/pkgdown.yml | 2 vignettes/bscui.Rmd | 17 ++++- 10 files changed, 88 insertions(+), 53 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-12-04 2.0.5
Title: Intergovernmental Organizations Database
Description: Tools to extract information from the Intergovernmental
Organizations ('IGO') Database , version 3, provided by the Correlates
of War Project <https://correlatesofwar.org/>. See also Pevehouse, J.
C. et al. (2020). Version 3 includes information from 1815 to 2014.
Author: Diego Hernangomez [aut, cre, cph]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between igoR versions 0.1.5 dated 2023-04-14 and 0.2.0 dated 2024-02-05
DESCRIPTION | 9 MD5 | 96 ++-- NAMESPACE | 3 NEWS.md | 9 R/data.R | 188 +++++---- R/igo_dyadic.R | 575 +++++++++++++-------------- R/igo_members.R | 274 +++++-------- R/igo_recode.R |only R/igo_search.R | 82 ++- R/igo_search_states.R | 73 +-- R/igo_state_membership.R | 316 ++++++--------- R/sysdata.rda |binary README.md | 67 +-- build/partial.rdb |only build/vignette.rds |binary data/igo_year_format3.rda |binary data/state_year_format3.rda |binary data/states2016.rda |binary inst/CITATION | 10 inst/REFERENCES.bib | 6 inst/WORDLIST | 10 inst/doc/igoR.R | 212 ++++------ inst/doc/igoR.Rmd | 293 ++++++-------- inst/doc/igoR.html | 601 +++++++++++++---------------- inst/doc/mapping.Rmd | 234 ++++------- inst/doc/mapping.html | 409 ++++++++----------- inst/schemaorg.json |only man/figures/logo.png |binary man/igo_dyadic.Rd | 96 ++-- man/igo_members.Rd | 47 +- man/igo_recode.Rd |only man/igo_search.Rd | 49 +- man/igo_search_states.Rd | 14 man/igo_state_membership.Rd | 40 - man/igo_year_format3.Rd | 60 ++ man/state_year_format3.Rd | 42 +- man/states2016.Rd | 41 - tests/testthat/_snaps |only tests/testthat/test-igo_dyadic.R | 54 +- tests/testthat/test-igo_members.R | 90 +++- tests/testthat/test-igo_recode.R |only tests/testthat/test-igo_search.R | 2 tests/testthat/test-igo_search_states.R |only tests/testthat/test-igo_state_membership.R | 106 ++++- vignettes/AustShared-1.png |binary vignettes/NAShared-1.png |binary vignettes/UNMaps-1.png |binary vignettes/igoR.Rmd | 293 ++++++-------- vignettes/mapping.Rmd | 234 ++++------- vignettes/refs_igo.bib | 16 50 files changed, 2268 insertions(+), 2383 deletions(-)
Title: Access Finnish Geospatial Data
Description: Designed to simplify geospatial data access from the Statistics Finland Web Feature Service API <https://geo.stat.fi/geoserver/index.html>, the geofi package offers researchers and analysts a set of tools to obtain and harmonize administrative spatial data for a wide range of applications, from urban planning to environmental research. The package contains annually updated time series of municipality key datasets that can be used for data aggregation and language translations.
Author: Markus Kainu [aut, cre] ,
Joona Lehtomaki [aut] ,
Juuso Parkkinen [ctb] ,
Jani Miettinen [ctb],
Pyry Kantanen [ctb],
Sampo Vesanen [ctb],
Leo Lahti [aut]
Maintainer: Markus Kainu <markus.kainu@kapsi.fi>
Diff between geofi versions 1.0.13 dated 2024-01-24 and 1.0.14 dated 2024-02-05
DESCRIPTION | 10 +- MD5 | 70 ++++++++++---------- NEWS.md | 6 + R/data.R | 98 ++++++++++++++++++++++++----- R/get_municipalities.R | 4 - R/get_municipality_pop.R | 4 - R/get_population_grid.R | 6 - R/get_zipcodes.R | 2 README.md | 3 data/municipality_key.rda |binary data/municipality_key_2013.rda |binary data/municipality_key_2014.rda |binary data/municipality_key_2015.rda |binary data/municipality_key_2016.rda |binary data/municipality_key_2017.rda |binary data/municipality_key_2018.rda |binary data/municipality_key_2019.rda |binary data/municipality_key_2020.rda |binary data/municipality_key_2021.rda |binary data/municipality_key_2022.rda |binary data/municipality_key_2023.rda |binary data/municipality_key_2024.rda |only inst/doc/geofi_datasets.html | 75 ++++++++++------------ inst/doc/geofi_joining_attribute_data.R | 4 - inst/doc/geofi_joining_attribute_data.Rmd | 4 - inst/doc/geofi_joining_attribute_data.html | 10 +- inst/doc/geofi_making_maps.html | 32 ++++----- inst/doc/geofi_spatial_analysis.html | 8 +- man/figures/readme_map-1.png |binary man/get_municipalities.Rd | 4 - man/get_municipality_pop.Rd | 4 - man/get_population_grid.Rd | 8 +- man/get_zipcodes.Rd | 2 man/municipality_key_2022.Rd | 12 +-- man/municipality_key_2023.Rd | 8 -- man/municipality_key_2024.Rd |only vignettes/geofi_joining_attribute_data.Rmd | 4 - 37 files changed, 218 insertions(+), 160 deletions(-)
Title: Fitting Survival Regression Models via 'Stan'
Description: Parametric survival regression models under the maximum likelihood approach via 'Stan'. Implemented regression models include accelerated failure time models, proportional hazards models, proportional odds models, accelerated hazard models, Yang and Prentice models, and extended hazard models. Available baseline survival distributions include exponential, Weibull, log-normal, log-logistic, gamma, rayleigh and fatigue (Birnbaum-Saunders) distributions. References: Lawless (2002) <ISBN:9780471372158>; Bennett (1982) <doi:10.1002/sim.4780020223>; Chen and Wang(2000) <doi:10.1080/01621459.2000.10474236>; Demarqui and Mayrink (2021) <doi:10.1214/20-BJPS471>.
Author: Fabio Demarqui [aut, cre, cph]
,
Andrew Johnson [ctb]
Maintainer: Fabio Demarqui <fndemarqui@est.ufmg.br>
Diff between survstan versions 0.0.6 dated 2024-01-18 and 0.0.6.1 dated 2024-02-05
DESCRIPTION | 8 +++--- MD5 | 12 ++++----- NEWS.md | 4 +++ R/summary.R | 2 - R/survfit.R | 70 ++++++++---------------------------------------------- R/utils.R | 2 - build/partial.rdb |binary 7 files changed, 27 insertions(+), 71 deletions(-)
Title: Practicals for Use with Davison (2003) Statistical Models
Description: Contains the datasets and a few functions for use with
the practicals outlined in Appendix A of the book
Statistical Models (Davison, 2003, Cambridge University Press),
which can be found at <doi:10.1017/CBO9780511815850>.
Author: Anthony Davison <Anthony.Davison@epfl.ch>
Maintainer: Alessandra R. Brazzale <brazzale@stat.unipd.it>
Diff between SMPracticals versions 1.4-3 dated 2019-01-16 and 1.4-3.1 dated 2024-02-05
DESCRIPTION | 17 ++++++++--------- MD5 | 10 +++++----- R/glm.diag.R | 4 +++- R/plot.glm.diag.R | 4 ++-- man/glm.diag.Rd | 4 ++-- man/plot.glm.diag.Rd | 4 ++-- 6 files changed, 22 insertions(+), 21 deletions(-)
Title: Manipulation of Microsoft Word and PowerPoint Documents
Description: Access and manipulate 'Microsoft Word', 'RTF' and 'Microsoft PowerPoint' documents from R.
The package focuses on tabular and graphical reporting from R; it also provides two functions
that let users get document content into data objects. A set of functions
lets add and remove images, tables and paragraphs of text in new or existing documents.
The package does not require any installation of Microsoft products to be able to write Microsoft
files.
Author: David Gohel [aut, cre],
Stefan Moog [aut],
ArData [cph],
Frank Hangler [ctb] ,
Liz Sander [ctb] ,
Anton Victorson [ctb] ,
Jon Calder [ctb] ,
John Harrold [ctb] ,
John Muschelli [ctb] ,
Bill Denney [ctb] ,
Nikolai Beck [ctb] ,
Greg Leleu [ctb] ,
Hongy [...truncated...]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between officer versions 0.6.3 dated 2023-10-22 and 0.6.4 dated 2024-02-05
DESCRIPTION | 16 - MD5 | 107 +++++---- NAMESPACE | 1 NEWS.md | 27 ++ R/docx_add.R | 8 R/docx_comments.R | 79 +++---- R/formatting_properties.R | 55 ++++- R/fortify_docx.R | 3 R/knitr_utils.R | 40 --- R/ooxml.R | 16 + R/ooxml_block_objects.R | 23 +- R/ooxml_run_objects.R | 5 R/ppt_notes.R | 22 +- R/ppt_ph_manipulate.R | 91 ++++---- R/pptx_slide_manip.R | 10 R/read_docx.R | 6 R/read_xlsx.R | 4 README.md | 2 man/block_caption.Rd | 2 man/body_end_block_section.Rd | 2 man/body_end_section_continuous.Rd | 2 man/body_end_section_landscape.Rd | 2 man/body_end_section_portrait.Rd | 2 man/body_set_default_section.Rd | 2 man/docx_comments.Rd | 21 + man/external_img.Rd | 2 man/fp_border.Rd | 49 ++++ man/ftext.Rd | 2 man/hyperlink_ftext.Rd | 2 man/officer.Rd | 8 man/ph_hyperlink.Rd | 13 - man/ph_location_fullsize.Rd | 4 man/ph_location_label.Rd | 4 man/ph_location_left.Rd | 4 man/ph_location_right.Rd | 4 man/ph_location_template.Rd | 4 man/ph_location_type.Rd | 4 man/ph_remove.Rd | 34 ++- man/ph_slidelink.Rd | 5 man/run_autonum.Rd | 2 man/run_bookmark.Rd | 2 man/run_columnbreak.Rd | 2 man/run_comment.Rd | 2 man/run_linebreak.Rd | 2 man/run_pagebreak.Rd | 2 man/run_reference.Rd | 2 man/run_word_field.Rd | 2 man/run_wordtext.Rd | 2 tests/testthat/docs_dir/test-docx_comments.docx |only tests/testthat/test-docx-add.R | 7 tests/testthat/test-docx-comments.R | 259 ++++++++++++++++++++++++ tests/testthat/test-docx-table.R | 20 + tests/testthat/test-fp_border.R | 94 ++++++++ tests/testthat/test-images.R | 10 tests/testthat/test-pptx-selections.R | 4 55 files changed, 835 insertions(+), 264 deletions(-)
Title: Solving Linear Inverse Models
Description: Functions that (1) find the minimum/maximum of a linear or quadratic function:
min or max (f(x)), where f(x) = ||Ax-b||^2 or f(x) = sum(a_i*x_i)
subject to equality constraints Ex=f and/or inequality constraints Gx>=h,
(2) sample an underdetermined- or overdetermined system Ex=f subject to Gx>=h, and if applicable Ax~=b,
(3) solve a linear system Ax=B for the unknown x. It includes banded and tridiagonal linear systems.
Author: Karline Soetaert [aut, cre],
Karel Van den Meersche [aut],
Dick van Oevelen [aut],
Charles L. Lawson [ctb] ,
Richard J. Hanson [ctb] ,
Jack Dongarra [ctb] ,
Cleve Moler [ctb]
Maintainer: Karline Soetaert <karline.soetaert@nioz.nl>
Diff between limSolve versions 1.5.7 dated 2023-09-21 and 1.5.7.1 dated 2024-02-05
DESCRIPTION | 6 +++--- MD5 | 20 ++++++++++---------- R/Solve.banded.R | 3 ++- R/Solve.block.R | 2 +- R/Solve.tridiag.R | 2 +- R/ldei.R | 2 +- R/ldp.R | 2 +- R/lsei.R | 3 ++- R/nnls.R | 2 +- inst/doc/limSolve.pdf |binary inst/doc/xsample.pdf |binary 11 files changed, 22 insertions(+), 20 deletions(-)
Title: Tools for Actuarial Experience Studies
Description: Experiences studies are an integral component of the actuarial
control cycle. Regardless of the decrement or policyholder behavior of
interest, the analyses conducted is often the same. Ultimately, this
package aims to reduce time spent writing the same code used for
different experience studies, therefore increasing the time for to uncover
new insights inherit within the relevant experience.
Author: Cody Buehler [aut, cre]
Maintainer: Cody Buehler <cb12991@me.com>
Diff between expstudy versions 1.0.3 dated 2022-12-08 and 2.0.0 dated 2024-02-05
expstudy-1.0.3/expstudy/LICENSE |only expstudy-1.0.3/expstudy/R/add_credibility.r |only expstudy-1.0.3/expstudy/R/add_metrics.R |only expstudy-1.0.3/expstudy/R/add_proportions.R |only expstudy-1.0.3/expstudy/R/aggregate.R |only expstudy-1.0.3/expstudy/R/compile_results.R |only expstudy-1.0.3/expstudy/R/expstudy.R |only expstudy-1.0.3/expstudy/R/format_metrics.R |only expstudy-1.0.3/expstudy/R/methods.R |only expstudy-1.0.3/expstudy/R/tbl_es.R |only expstudy-1.0.3/expstudy/R/utils.R |only expstudy-1.0.3/expstudy/man/add_credibility.Rd |only expstudy-1.0.3/expstudy/man/add_metrics.Rd |only expstudy-1.0.3/expstudy/man/add_proportions.Rd |only expstudy-1.0.3/expstudy/man/aggregate.Rd |only expstudy-1.0.3/expstudy/man/compile_results.Rd |only expstudy-1.0.3/expstudy/man/expstudy.Rd |only expstudy-1.0.3/expstudy/man/format_metrics.Rd |only expstudy-1.0.3/expstudy/man/is_expstudy.Rd |only expstudy-1.0.3/expstudy/man/pipe.Rd |only expstudy-1.0.3/expstudy/man/reexports.Rd |only expstudy-1.0.3/expstudy/man/tbl_es-class.Rd |only expstudy-1.0.3/expstudy/man/tidyeval.Rd |only expstudy-1.0.3/expstudy/tests/testthat/setup.R |only expstudy-1.0.3/expstudy/tests/testthat/test-compile_results.R |only expstudy-1.0.3/expstudy/tests/testthat/test-dplyr.R |only expstudy-1.0.3/expstudy/tests/testthat/test-tidyr.R |only expstudy-2.0.0/expstudy/DESCRIPTION | 39 - expstudy-2.0.0/expstudy/MD5 | 71 - expstudy-2.0.0/expstudy/NAMESPACE | 205 ----- expstudy-2.0.0/expstudy/NEWS.md | 50 - expstudy-2.0.0/expstudy/R/compute_fct_adjs.R |only expstudy-2.0.0/expstudy/R/defunct.R |only expstudy-2.0.0/expstudy/R/expstudy-package.R | 113 -- expstudy-2.0.0/expstudy/R/guess_measure_sets.R |only expstudy-2.0.0/expstudy/R/metrics.R |only expstudy-2.0.0/expstudy/R/mortexp.R | 104 +- expstudy-2.0.0/expstudy/R/mutate_expecvar.R |only expstudy-2.0.0/expstudy/R/mutate_metrics.R |only expstudy-2.0.0/expstudy/R/summarise_measures.R |only expstudy-2.0.0/expstudy/R/validators.R |only expstudy-2.0.0/expstudy/R/zzz.R |only expstudy-2.0.0/expstudy/README.md | 377 ++++++---- expstudy-2.0.0/expstudy/data/mortexp.rda |binary expstudy-2.0.0/expstudy/man/compute_fct_adjs.Rd |only expstudy-2.0.0/expstudy/man/defunct.Rd |only expstudy-2.0.0/expstudy/man/expstudy-package.Rd | 13 expstudy-2.0.0/expstudy/man/figures/README-unnamed-chunk-8-1.png |only expstudy-2.0.0/expstudy/man/figures/README-unnamed-chunk-9-1.png |only expstudy-2.0.0/expstudy/man/figures/logo.png |only expstudy-2.0.0/expstudy/man/guess_measure_sets.Rd |only expstudy-2.0.0/expstudy/man/metrics.Rd |only expstudy-2.0.0/expstudy/man/mortexp.Rd | 100 +- expstudy-2.0.0/expstudy/man/mutate_expecvar.Rd |only expstudy-2.0.0/expstudy/man/mutate_metrics.Rd |only expstudy-2.0.0/expstudy/man/summarise_measures.Rd |only expstudy-2.0.0/expstudy/tests/testthat/helper-expectations.R |only expstudy-2.0.0/expstudy/tests/testthat/test-compute_fct_adjs.R |only expstudy-2.0.0/expstudy/tests/testthat/test-guess_measure_sets.R |only expstudy-2.0.0/expstudy/tests/testthat/test-metrics.R |only expstudy-2.0.0/expstudy/tests/testthat/test-mutate_expecvar.R |only expstudy-2.0.0/expstudy/tests/testthat/test-mutate_metrics.R |only expstudy-2.0.0/expstudy/tests/testthat/test-summarise_measures.R |only 63 files changed, 461 insertions(+), 611 deletions(-)
Title: Connect to an OMOP Common Data Model
Description: Provides tools for working with observational health data in the
Observational Medical Outcomes Partnership (OMOP) Common Data Model format with a pipe friendly syntax.
Common data model database table references are stored in a single compound object along with metadata.
Author: Adam Black [aut, cre] ,
Artem Gorbachev [aut],
Edward Burn [aut],
Marti Catala Sabate [aut]
Maintainer: Adam Black <black@ohdsi.org>
Diff between CDMConnector versions 1.2.1 dated 2024-01-18 and 1.3.0 dated 2024-02-05
CDMConnector-1.2.1/CDMConnector/R/visR.R |only CDMConnector-1.2.1/CDMConnector/inst/cohorts1/cerebralVenousSinusThrombosis01.json |only CDMConnector-1.2.1/CDMConnector/inst/cohorts1/deepVeinThrombosis01.json |only CDMConnector-1.2.1/CDMConnector/inst/cohorts2/cerebralVenousSinusThrombosis01.json |only CDMConnector-1.2.1/CDMConnector/inst/cohorts2/deepVeinThrombosis01.json |only CDMConnector-1.2.1/CDMConnector/inst/cohorts3/GiBleed_all_end10.json |only CDMConnector-1.2.1/CDMConnector/inst/cohorts3/GiBleed_end10.json |only CDMConnector-1.2.1/CDMConnector/inst/doc/a02_working_with_cohorts.R |only CDMConnector-1.2.1/CDMConnector/inst/doc/a02_working_with_cohorts.Rmd |only CDMConnector-1.2.1/CDMConnector/inst/doc/a02_working_with_cohorts.html |only CDMConnector-1.2.1/CDMConnector/man/cash-.cdm_reference.Rd |only CDMConnector-1.2.1/CDMConnector/man/cohortCount.Rd |only CDMConnector-1.2.1/CDMConnector/man/collect.cdm_reference.Rd |only CDMConnector-1.2.1/CDMConnector/man/dropTable.Rd |only CDMConnector-1.2.1/CDMConnector/man/insertTable.Rd |only CDMConnector-1.2.1/CDMConnector/man/print.cdm_reference.Rd |only CDMConnector-1.2.1/CDMConnector/man/sub-.cdm_reference.Rd |only CDMConnector-1.2.1/CDMConnector/man/sub-sub-.cdm_reference.Rd |only CDMConnector-1.2.1/CDMConnector/man/visr.omop_attrition.Rd |only CDMConnector-1.2.1/CDMConnector/tests/testthat/test-visR.R |only CDMConnector-1.2.1/CDMConnector/vignettes/a02_working_with_cohorts.Rmd |only CDMConnector-1.3.0/CDMConnector/DESCRIPTION | 18 CDMConnector-1.3.0/CDMConnector/MD5 | 186 +-- CDMConnector-1.3.0/CDMConnector/NAMESPACE | 35 CDMConnector-1.3.0/CDMConnector/NEWS.md | 4 CDMConnector-1.3.0/CDMConnector/R/CDMConnector-package.R | 1 CDMConnector-1.3.0/CDMConnector/R/Eunomia.R | 7 CDMConnector-1.3.0/CDMConnector/R/cdm.R | 419 ++----- CDMConnector-1.3.0/CDMConnector/R/cdmSubset.R | 37 CDMConnector-1.3.0/CDMConnector/R/cohortTransformations.R | 16 CDMConnector-1.3.0/CDMConnector/R/cohort_ddl.R | 2 CDMConnector-1.3.0/CDMConnector/R/compute.R | 165 --- CDMConnector-1.3.0/CDMConnector/R/copy_cdm_to.R | 114 -- CDMConnector-1.3.0/CDMConnector/R/dateadd.R | 2 CDMConnector-1.3.0/CDMConnector/R/dbSource.R |only CDMConnector-1.3.0/CDMConnector/R/generateCohortSet.R | 544 ++-------- CDMConnector-1.3.0/CDMConnector/R/generateConceptCohortSet.R | 75 - CDMConnector-1.3.0/CDMConnector/R/reexports-omopgenerics.R |only CDMConnector-1.3.0/CDMConnector/R/sysdata.rda |binary CDMConnector-1.3.0/CDMConnector/R/validate.R | 12 CDMConnector-1.3.0/CDMConnector/README.md | 116 +- CDMConnector-1.3.0/CDMConnector/build/vignette.rds |binary CDMConnector-1.3.0/CDMConnector/inst/cohorts1/CohortsToCreate.csv | 4 CDMConnector-1.3.0/CDMConnector/inst/cohorts1/cerebral_venous_sinus_thrombosis_01.json |only CDMConnector-1.3.0/CDMConnector/inst/cohorts1/deep_vein_thrombosis_01.json |only CDMConnector-1.3.0/CDMConnector/inst/cohorts2/cerebral_venous_sinus_thrombosis_01.json |only CDMConnector-1.3.0/CDMConnector/inst/cohorts2/deep_vein_thrombosis_01.json |only CDMConnector-1.3.0/CDMConnector/inst/cohorts3/gibleed_all_end_10.json |only CDMConnector-1.3.0/CDMConnector/inst/cohorts3/gibleed_end_10.json |only CDMConnector-1.3.0/CDMConnector/inst/csv/OMOP_CDMv5.3_Field_Level.csv | 2 CDMConnector-1.3.0/CDMConnector/inst/csv/OMOP_CDMv5.4_Field_Level.csv | 2 CDMConnector-1.3.0/CDMConnector/inst/doc/a01_getting-started.R | 23 CDMConnector-1.3.0/CDMConnector/inst/doc/a01_getting-started.Rmd | 27 CDMConnector-1.3.0/CDMConnector/inst/doc/a01_getting-started.html | 262 ++-- CDMConnector-1.3.0/CDMConnector/inst/doc/a02_cohorts.R |only CDMConnector-1.3.0/CDMConnector/inst/doc/a02_cohorts.Rmd |only CDMConnector-1.3.0/CDMConnector/inst/doc/a02_cohorts.html |only CDMConnector-1.3.0/CDMConnector/inst/doc/a03_dbplyr.R | 2 CDMConnector-1.3.0/CDMConnector/inst/doc/a03_dbplyr.Rmd | 2 CDMConnector-1.3.0/CDMConnector/inst/doc/a03_dbplyr.html | 17 CDMConnector-1.3.0/CDMConnector/inst/doc/a05_cdm_reference_backends.R | 17 CDMConnector-1.3.0/CDMConnector/inst/doc/a05_cdm_reference_backends.Rmd | 17 CDMConnector-1.3.0/CDMConnector/inst/doc/a05_cdm_reference_backends.html | 27 CDMConnector-1.3.0/CDMConnector/inst/doc/a06_using_cdm_attributes.R | 53 CDMConnector-1.3.0/CDMConnector/inst/doc/a06_using_cdm_attributes.Rmd | 53 CDMConnector-1.3.0/CDMConnector/inst/doc/a06_using_cdm_attributes.html | 213 +-- CDMConnector-1.3.0/CDMConnector/inst/png |only CDMConnector-1.3.0/CDMConnector/man/appendPermanent.Rd | 2 CDMConnector-1.3.0/CDMConnector/man/asDate.Rd | 2 CDMConnector-1.3.0/CDMConnector/man/cdmCon.Rd |only CDMConnector-1.3.0/CDMConnector/man/cdmName.Rd | 8 CDMConnector-1.3.0/CDMConnector/man/cdmWriteSchema.Rd |only CDMConnector-1.3.0/CDMConnector/man/cdm_from_con.Rd | 12 CDMConnector-1.3.0/CDMConnector/man/cohortAttrition.Rd | 6 CDMConnector-1.3.0/CDMConnector/man/cohortSet.Rd | 6 CDMConnector-1.3.0/CDMConnector/man/cohort_count.Rd |only CDMConnector-1.3.0/CDMConnector/man/dbSource.Rd |only CDMConnector-1.3.0/CDMConnector/man/generateCohortSet.Rd | 10 CDMConnector-1.3.0/CDMConnector/man/new_generated_cohort_set.Rd | 34 CDMConnector-1.3.0/CDMConnector/man/recordCohortAttrition.Rd | 6 CDMConnector-1.3.0/CDMConnector/man/reexports.Rd |only CDMConnector-1.3.0/CDMConnector/man/tbl_group.Rd | 2 CDMConnector-1.3.0/CDMConnector/man/version.Rd | 2 CDMConnector-1.3.0/CDMConnector/tests/testthat/setup.R | 21 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-Eunomia.R | 30 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-cdm_tranformations.R | 80 - CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-cdm.R | 133 +- CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-cohortTransformations.R | 15 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-compute.R | 38 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-copy_cdm_to.R | 20 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-custom_cohort_creation.R |only CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-dateadd.R | 136 ++ CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-example-analysis.R | 43 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-generateCohortSet.R | 89 - CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-generateConceptCohortSet.R | 54 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-newGeneratedCohortSet.R | 78 - CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-recordCohortAttrition.R | 64 - CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-summariseQuantile.R | 7 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-temp-tables.R | 1 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-utils.R | 8 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-db-write_schema_with_database.R | 10 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-dbSource.R |only CDMConnector-1.3.0/CDMConnector/tests/testthat/test-deprecations.R |only CDMConnector-1.3.0/CDMConnector/tests/testthat/test-local_cdm.R | 8 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-memory-issue.R | 6 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-pool.R | 11 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-readCohortSet.R | 28 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-validate.R | 175 +-- CDMConnector-1.3.0/CDMConnector/tests/testthat/test-write_prefix_cohort_generation_snowflake.R | 7 CDMConnector-1.3.0/CDMConnector/tests/testthat/test-zzz-DBI.R | 11 CDMConnector-1.3.0/CDMConnector/vignettes/a01_getting-started.Rmd | 27 CDMConnector-1.3.0/CDMConnector/vignettes/a02_cohorts.Rmd |only CDMConnector-1.3.0/CDMConnector/vignettes/a03_dbplyr.Rmd | 2 CDMConnector-1.3.0/CDMConnector/vignettes/a05_cdm_reference_backends.Rmd | 17 CDMConnector-1.3.0/CDMConnector/vignettes/a06_using_cdm_attributes.Rmd | 53 115 files changed, 1699 insertions(+), 2037 deletions(-)
Title: Bhavcopy and Live Market Data from National Stock Exchange (NSE)
& Bombay Stock Exchange (BSE) India
Description: Download Current & Historical Bhavcopy. Get Live Market data from NSE India of Equities and Derivatives (F&O) segment. Data source <https://www.nseindia.com/>.
Author: Nandan Patil [cre, aut]
Maintainer: Nandan Patil <tryanother609@gmail.com>
Diff between nser versions 1.5.0 dated 2023-09-19 and 1.5.1 dated 2024-02-05
DESCRIPTION | 10 ++++----- MD5 | 29 +++++++++++++++------------- NAMESPACE | 4 ++- R/nseipo.R | 15 +++++--------- R/optbanknifty.R | 36 +++++++++++++++++++++++++++++++++-- R/optnifty.R | 40 +++++++++++++++++++++++++++++++++++++-- README.md | 46 +++++++++++++++++++++++++++++++-------------- build/vignette.rds |binary inst/doc/optbanknifty.Rmd | 3 -- inst/doc/optbanknifty.html | 5 ---- inst/doc/optnifty.Rmd | 2 - inst/doc/optnifty.html | 5 ---- inst/nseoption.py |only man/optbanknifty.Rd |only man/optnifty.Rd |only vignettes/optbanknifty.Rmd | 3 -- vignettes/optnifty.Rmd | 2 - 17 files changed, 136 insertions(+), 64 deletions(-)
Title: Augments 'ASReml-R' in Fitting Mixed Models and Packages
Generally in Exploring Prediction Differences
Description: Assists in automating the selection of terms to include in mixed models when
'asreml' is used to fit the models. Procedures are available for choosing models that
conform to the hierarchy or marginality principle, for fitting and choosing between
two-dimensional spatial models using correlation, natural cubic smoothing spline and
P-spline models. A history of the fitting of a sequence of models is kept in a data frame.
Also used to compute functions and contrasts of, to investigate differences between and
to plot predictions obtained using any model fitting function. The content falls into
the following natural groupings: (i) Data, (ii) Model modification functions, (iii) Model
selection and description functions, (iv) Model diagnostics and simulation functions,
(v) Prediction production and presentation functions, (vi) Response transformation
functions, (vii) Object manipulation functions, and (viii) Miscellaneous functions
(for further details see 'asremlPlus-package' in help). The [...truncated...]
Author: Chris Brien [aut, cre]
Maintainer: Chris Brien <chris.brien@adelaide.edu.au>
Diff between asremlPlus versions 4.4.24 dated 2023-12-20 and 4.4.27 dated 2024-02-05
DESCRIPTION | 47 - MD5 | 168 ++-- NAMESPACE | 13 R/REMLRTIC.v4.r | 148 ++++ R/S3methodsDeprecations.r | 1 R/asremlPlusUtilities.r | 109 ++- R/estimateV.v3.R | 358 ++++++---- R/pairTrans.r | 3 R/psplineUtilities.v2.R | 184 ++++- R/reml4.v10.r | 13 R/spatial.funcs.v8.r | 942 ++++++++-------------------- R/spatial.utilities.v1.r |only build/partial.rdb |binary build/vignette.rds |binary inst/NEWS.Rd | 24 inst/doc/Ladybird.asreml.pdf |binary inst/doc/Ladybird.lm.pdf |binary inst/doc/Wheat.analysis.pdf |binary inst/doc/Wheat.infoCriteria.pdf |binary inst/doc/WheatSpatialModels.pdf |binary inst/doc/asremlPlus-manual.pdf |binary inst/extdata/testDiffs.rda |binary man/ChickpeaEnd.Rd | 4 man/LSD.frame.Rd | 4 man/R2adj.asreml.Rd |only man/REMLRT.asreml.Rd | 8 man/addBacktransforms.alldiffs.Rd | 6 man/addSpatialModel.asrtests.Rd | 98 +- man/addSpatialModelOnIC.asrtests.Rd | 100 +- man/addto.test.summary.Rd | 2 man/allDifferences.data.frame.Rd | 10 man/alldiffs.object.Rd | 2 man/as.asrtests.Rd | 8 man/asremlPlus-package.Rd | 321 ++++----- man/asrtests.object.Rd | 2 man/bootREMLRT.asreml.Rd | 8 man/changeModelOnIC.asrtests.Rd | 2 man/changeTerms.asrtests.Rd | 6 man/chooseModel.asrtests.Rd | 8 man/chooseModel.data.frame.Rd | 6 man/chooseSpatialModelOnIC.asrtests.Rd | 83 +- man/convAsremlobj.asreml.Rd | 2 man/convEffectNames2DataFrame.asreml.Rd | 2 man/estimateV.asreml.Rd | 4 man/exploreLSDs.alldiffs.Rd | 6 man/facCombine.alldiffs.Rd | 2 man/facRename.alldiffs.Rd | 4 man/getTestEntry.asrtests.Rd | 2 man/getTestPvalue.asrtests.Rd | 4 man/infoCriteria.asreml.Rd | 8 man/iterate.asrtests.Rd | 2 man/linTransform.alldiffs.Rd | 10 man/loadASRemlVersion.Rd | 2 man/makeTPPSplineMats.data.frame.Rd | 34 - man/pairdiffsTransform.alldiffs.Rd | 4 man/pickLSDstatistics.alldiffs.Rd | 10 man/plotLSDerrors.alldiffs.Rd | 4 man/plotLSDerrors.data.frame.Rd | 6 man/plotLSDs.alldiffs.Rd | 6 man/plotLSDs.data.frame.Rd | 8 man/plotPredictions.data.frame.Rd | 10 man/powerTransform.Rd | 2 man/predictPlus.asreml.Rd | 14 man/predictPresent.asreml.Rd | 20 man/print.alldiffs.Rd | 2 man/print.asrtests.Rd | 2 man/recalcLSD.alldiffs.Rd | 4 man/recalcWaldTab.asrtests.Rd | 4 man/redoErrorIntervals.alldiffs.Rd | 6 man/reparamSigDevn.asrtests.Rd | 4 man/rmboundary.asrtests.Rd | 4 man/simulate.asreml.Rd | 6 man/testswapran.asrtests.Rd | 10 man/variofaces.asreml.Rd | 8 tests/testthat.R | 1 tests/testthat/data/PSA.NW.dat.rda |only tests/testthat/test42EstimateV.r | 178 +++++ tests/testthat/test42GeneticCane.R | 69 +- tests/testthat/test42HEB25estimateV.r | 7 tests/testthat/test42MET.r | 20 tests/testthat/test42Orange.r | 39 + tests/testthat/test42REMLRTIC.r | 51 + tests/testthat/test42Selection.r | 2 tests/testthat/test42SpatialModels.r | 493 ++++++++++++-- tests/testthat/test42WheatSpatialVignette.r | 19 tests/testthat/test42glm.r | 2 vignettes/Wheat.analysis.Rmd |only 87 files changed, 2351 insertions(+), 1434 deletions(-)
Title: Testing for Spatial Independence of Qualitative Data in Cross
Section
Description: Testing for Spatial Dependence of Qualitative Data in Cross Section. The list of functions includes join-count tests, Q test, spatial scan test, similarity test and spatial runs test. The methodology of these models can be found in <doi:10.1007/s10109-009-0100-1> and <doi:10.1080/13658816.2011.586327>.
Author: Fernando Lopez [aut, cre] ,
Roman Minguez [aut] ,
Antonio Paez [aut] ,
Manuel Ruiz [aut]
Maintainer: Fernando Lopez <fernando.lopez@upct.es>
Diff between spqdep versions 0.1.2 dated 2022-03-28 and 0.1.3.2 dated 2024-02-05
spqdep-0.1.2/spqdep/R/print.qtest.R |only spqdep-0.1.2/spqdep/vignettes/libs |only spqdep-0.1.3.2/spqdep/DESCRIPTION | 14 spqdep-0.1.3.2/spqdep/MD5 | 170 spqdep-0.1.3.2/spqdep/NAMESPACE | 3 spqdep-0.1.3.2/spqdep/R/Q.map.test.R | 8 spqdep-0.1.3.2/spqdep/R/Q.test.R | 19 spqdep-0.1.3.2/spqdep/R/datasets.R | 13 spqdep-0.1.3.2/spqdep/R/jc.test.R | 12 spqdep-0.1.3.2/spqdep/R/local.jc.test.R |only spqdep-0.1.3.2/spqdep/R/local.sp.runs.test.R | 32 spqdep-0.1.3.2/spqdep/R/m.surround.R | 18 spqdep-0.1.3.2/spqdep/R/methods_localjc.R |only spqdep-0.1.3.2/spqdep/R/methods_localsrq.R | 2 spqdep-0.1.3.2/spqdep/R/methods_m_surr.R | 3 spqdep-0.1.3.2/spqdep/R/methods_scantest.R | 1 spqdep-0.1.3.2/spqdep/R/plot.sprunstest.R | 6 spqdep-0.1.3.2/spqdep/R/scan.test.R | 12 spqdep-0.1.3.2/spqdep/R/similarity.test.R | 6 spqdep-0.1.3.2/spqdep/R/sp.runs.test.R | 14 spqdep-0.1.3.2/spqdep/R/summary.spjctest.R | 6 spqdep-0.1.3.2/spqdep/build/partial.rdb |binary spqdep-0.1.3.2/spqdep/build/vignette.rds |binary spqdep-0.1.3.2/spqdep/data/provinces_spain.rda |binary spqdep-0.1.3.2/spqdep/inst/CITATION | 10 spqdep-0.1.3.2/spqdep/inst/doc/spq_userguide.R | 347 - spqdep-0.1.3.2/spqdep/inst/doc/spq_userguide.Rmd | 984 +-- spqdep-0.1.3.2/spqdep/inst/doc/spq_userguide.html | 7111 +++++++++++++--------- spqdep-0.1.3.2/spqdep/man/Boots.sf.Rd | 11 spqdep-0.1.3.2/spqdep/man/Q.map.test.Rd | 8 spqdep-0.1.3.2/spqdep/man/Q.test.Rd | 18 spqdep-0.1.3.2/spqdep/man/jc.test.Rd | 12 spqdep-0.1.3.2/spqdep/man/local.jc.test.Rd |only spqdep-0.1.3.2/spqdep/man/local.sp.runs.test.Rd | 32 spqdep-0.1.3.2/spqdep/man/m.surround.Rd | 18 spqdep-0.1.3.2/spqdep/man/methods_localjc.Rd |only spqdep-0.1.3.2/spqdep/man/methods_localsrq.Rd | 1 spqdep-0.1.3.2/spqdep/man/methods_m_surr.Rd | 2 spqdep-0.1.3.2/spqdep/man/plot.sprunstest.Rd | 6 spqdep-0.1.3.2/spqdep/man/provinces_spain.Rd | 2 spqdep-0.1.3.2/spqdep/man/scan.test.Rd | 12 spqdep-0.1.3.2/spqdep/man/similarity.test.Rd | 6 spqdep-0.1.3.2/spqdep/man/sp.runs.test.Rd | 14 spqdep-0.1.3.2/spqdep/man/summary.spjctest.Rd | 6 spqdep-0.1.3.2/spqdep/vignettes/bibliospq.bib | 18 spqdep-0.1.3.2/spqdep/vignettes/spq_userguide.Rmd | 984 +-- 46 files changed, 5738 insertions(+), 4203 deletions(-)
Title: A Lightweight Interface Between 'ggplot2' and 'igraph' Objects
Description: Interface to integrate 'igraph' and 'ggplot2' graphics within spatial maps. 'RGraphSpace' implements new geometric objects using 'ggplot2' prototypes, customized for representing large 'igraph' objects in a normalized coordinate system. By scaling shapes and graph elements, 'RGraphSpace' can provide a framework for layered visualizations.
Author: Victor Apolonio [ctb],
Vinicius Chagas [ctb],
Mauro Castro [aut, cre]
Maintainer: Mauro Castro <mauro.a.castro@gmail.com>
Diff between RGraphSpace versions 1.0.3 dated 2024-02-03 and 1.0.5 dated 2024-02-05
DESCRIPTION | 9 ++++----- MD5 | 14 +++++++------- build/vignette.rds |binary inst/CITATION | 5 +++-- inst/doc/RGraphSpace.R | 6 +++--- inst/doc/RGraphSpace.Rmd | 9 +++++---- inst/doc/RGraphSpace.html | 41 ++++++++++++++++++----------------------- vignettes/RGraphSpace.Rmd | 9 +++++---- 8 files changed, 45 insertions(+), 48 deletions(-)
Title: Processing and Transforming Relational Event History Data
Description: Efficiently processes relational event history data and transforms them into formats suitable for other packages. The primary objective of this package is to convert event history data into a format that integrates with the packages in 'remverse' and is compatible with various analytical tools (e.g., computing network statistics, estimating tie-oriented or actor-oriented social network models). Second, it can also transform the data into formats compatible with other packages out of 'remverse'. The package processes the data for two types of temporal social network models: tie-oriented modeling framework (Butts, C., 2008, <doi:10.1111/j.1467-9531.2008.00203.x>) and actor-oriented modeling framework (Stadtfeld, C., & Block, P., 2017, <doi:10.15195/v4.a14>).
Author: Giuseppe Arena [aut, cre],
Rumana Lakdawala [ctb],
Marlyne Meijerink-Bosman [ctb],
Diana Karimova [ctb],
Fabio Generoso Vieira [ctb],
Mahdi Shafiee Kamalabad [ctb],
Roger Leenders [ctb],
Joris Mulder [ctb]
Maintainer: Giuseppe Arena <g.arena@tilburguniversity.edu>
Diff between remify versions 3.2.4 dated 2023-12-06 and 3.2.5 dated 2024-02-05
remify-3.2.4/remify/man/figures |only remify-3.2.5/remify/DESCRIPTION | 8 ++++---- remify-3.2.5/remify/MD5 | 13 ++++++------- remify-3.2.5/remify/R/remify.R | 18 ++++++++++++------ remify-3.2.5/remify/inst/doc/remify.html | 4 ++-- remify-3.2.5/remify/inst/include/remify/remify.h | 4 ++-- remify-3.2.5/remify/src/RcppExports.cpp | 2 +- remify-3.2.5/remify/src/remify.cpp | 13 ++++++------- 8 files changed, 33 insertions(+), 29 deletions(-)
Title: Unified Framework for Numerical Optimizers
Description: Provides a unified object-oriented framework for numerical
optimizers in R. Allows for both minimization and maximization with any
optimizer, optimization over more than one function argument, measuring of
computation time, setting a time limit for long optimization tasks.
Author: Lennart Oelschlaeger [aut, cre]
,
Marius Oetting [ctb]
Maintainer: Lennart Oelschlaeger <oelschlaeger.lennart@gmail.com>
Diff between optimizeR versions 1.0.3 dated 2024-01-31 and 1.0.4 dated 2024-02-05
DESCRIPTION | 10 - MD5 | 20 +- NEWS.md | 10 - R/objective.R | 2 R/optimizer.R | 2 man/apply_optimizer.Rd | 88 +++++------ man/define_optimizer.Rd | 308 ++++++++++++++++++++-------------------- man/new_optimizer.Rd | 190 ++++++++++++------------ man/validate_optimizer.Rd | 92 +++++------ tests/testthat/test-objective.R | 24 +++ tests/testthat/test-optimizer.R | 22 ++ 11 files changed, 409 insertions(+), 359 deletions(-)
Title: Templated Reporting Workflows in Word and PowerPoint
Description: Automated reporting in Word and PowerPoint can require customization for each organizational template. This package works around this by adding standard reporting functions and an abstraction layer to facilitate automated reporting workflows that can be replicated across different organizational templates.
Author: John Harrold [aut, cre] ,
Bryan Smith [aut]
Maintainer: John Harrold <john.m.harrold@gmail.com>
Diff between onbrand versions 1.0.4 dated 2023-12-08 and 1.0.5 dated 2024-02-05
DESCRIPTION | 6 MD5 | 28 +-- NAMESPACE | 2 NEWS.md | 2 R/span_table.R | 99 ++++++------ R/view_layout.R | 2 inst/doc/Creating_Templated_Office_Workflows.R | 8 inst/doc/Creating_Templated_Office_Workflows.html | 8 inst/doc/Custom_Office_Templates.R | 2 inst/doc/Custom_Office_Templates.Rmd | 2 inst/doc/Custom_Office_Templates.html | 2 inst/test_scripts/span_table.R | 10 + man/build_span.Rd | 181 ++++++++++++++++++---- man/span_table.Rd | 48 +++-- vignettes/Custom_Office_Templates.Rmd | 2 15 files changed, 272 insertions(+), 130 deletions(-)
Title: Permutations of Multisets in Cool-Lex Order
Description: A set of tools to permute multisets without loops or hash tables and to generate integer partitions. The permutation functions are based on C code from Aaron Williams. Cool-lex order is similar to colexicographical order. The algorithm is described in Williams, A. Loopless Generation of Multiset Permutations by Prefix Shifts. SODA 2009, Symposium on Discrete Algorithms, New York, United States. The permutation code is distributed without restrictions. The code for stable and efficient computation of multinomial coefficients comes from Dave Barber. The code can be download from <http://tamivox.org/dave/multinomial/index.html> and is distributed without conditions. The package also generates the integer partitions of a positive, non-zero integer n. The C++ code for this is based on Python code from Jerome Kelleher which can be found here <https://jeromekelleher.net/category/combinatorics.html>. The C++ code and Python code are distributed without conditions.
Author: James Curran, Aaron Williams, Jerome Kelleher, Dave Barber
Maintainer: James Curran <j.curran@auckland.ac.nz>
Diff between multicool versions 1.0.0 dated 2023-12-02 and 1.0.1 dated 2024-02-05
DESCRIPTION | 10 +- MD5 | 14 +-- NAMESPACE | 25 +++--- R/RcppExports.R | 38 +++++----- R/Stirling2.R | 202 ++++++++++++++++++++++++++++--------------------------- R/zzz.R | 14 ++- man/Bell.Rd | 7 + man/Stirling2.Rd | 7 + 8 files changed, 172 insertions(+), 145 deletions(-)
Title: Mobility Network Analysis
Description: Implements the method to analyse weighted mobility networks or distribution networks as outlined in:
Block, P., Stadtfeld, C., & Robins, G. (2022) <doi:10.1016/j.socnet.2021.08.003>.
The purpose of the model is to analyse the structure of mobility,
incorporating exogenous predictors pertaining to individuals and locations
known from classical mobility analyses, as well as modelling emergent mobility
patterns akin to structural patterns known from the statistical analysis of social networks.
Author: Per Block [cre, aut, cph] ,
Christoph Stadtfeld [aut] ,
Nico Keiser [aut],
Marion Hoffman [aut]
Maintainer: Per Block <block@soziologie.uzh.ch>
Diff between MoNAn versions 0.1.2 dated 2023-08-29 and 0.1.3 dated 2024-02-05
MoNAn-0.1.2/MoNAn/man/concentration_GW_dyad_covar_bin.Rd |only MoNAn-0.1.3/MoNAn/DESCRIPTION | 14 MoNAn-0.1.3/MoNAn/MD5 | 58 +- MoNAn-0.1.3/MoNAn/NAMESPACE | 19 MoNAn-0.1.3/MoNAn/NEWS.md |only MoNAn-0.1.3/MoNAn/R/1_hiddenFunctions.R | 67 +++ MoNAn-0.1.3/MoNAn/R/2_effectFunctions.R | 64 +++ MoNAn-0.1.3/MoNAn/R/2b_effectFunctions_loops.R | 157 +++++-- MoNAn-0.1.3/MoNAn/R/2c_effectFunctions_concentration.R | 264 ++++++++++-- MoNAn-0.1.3/MoNAn/R/2d_effectFunctions_reciprocity.R | 233 ++++++++--- MoNAn-0.1.3/MoNAn/R/2e_effectFunctions_transitivity.R | 315 +++++++++++++++ MoNAn-0.1.3/MoNAn/R/2x_effects_test.R |only MoNAn-0.1.3/MoNAn/R/3_coreFunctions.R | 54 ++ MoNAn-0.1.3/MoNAn/R/mobilityData.R | 2 MoNAn-0.1.3/MoNAn/R/sysdata.rda |only MoNAn-0.1.3/MoNAn/README.md | 32 + MoNAn-0.1.3/MoNAn/man/MoNAn-package.Rd | 1 MoNAn-0.1.3/MoNAn/man/concentration_GW.Rd | 4 MoNAn-0.1.3/MoNAn/man/concentration_GW_dyad_covar.Rd |only MoNAn-0.1.3/MoNAn/man/concentration_prop.Rd |only MoNAn-0.1.3/MoNAn/man/concentration_prop_orig_cov.Rd |only MoNAn-0.1.3/MoNAn/man/concentration_rankGW.Rd |only MoNAn-0.1.3/MoNAn/man/createAlgorithm.Rd | 2 MoNAn-0.1.3/MoNAn/man/estimateMobilityNetwork.Rd | 5 MoNAn-0.1.3/MoNAn/man/in_weights_GW.Rd |only MoNAn-0.1.3/MoNAn/man/loops_additional_origin.Rd |only MoNAn-0.1.3/MoNAn/man/loops_x_loops_additional_origin.Rd |only MoNAn-0.1.3/MoNAn/man/mobilityData.Rd | 2 MoNAn-0.1.3/MoNAn/man/reciprocity_GW.Rd | 4 MoNAn-0.1.3/MoNAn/man/reciprocity_GW_dyad_covar.Rd |only MoNAn-0.1.3/MoNAn/man/reciprocity_GW_dyad_covar_bin.Rd | 4 MoNAn-0.1.3/MoNAn/man/reciprocity_min_dyad_covar.Rd |only MoNAn-0.1.3/MoNAn/man/simulateMobilityNetworks.Rd | 4 MoNAn-0.1.3/MoNAn/man/target_change_match.Rd |only MoNAn-0.1.3/MoNAn/man/test_effect.Rd |only MoNAn-0.1.3/MoNAn/man/transitivity_GW.Rd |only MoNAn-0.1.3/MoNAn/man/transitivity_basic.Rd |only MoNAn-0.1.3/MoNAn/man/triad120C.Rd |only MoNAn-0.1.3/MoNAn/man/triad120D.Rd |only MoNAn-0.1.3/MoNAn/man/triad120U.Rd |only 40 files changed, 1101 insertions(+), 204 deletions(-)
Title: Combined miRNA- And mRNA-Testing
Description: Package for combined miRNA- and mRNA-testing.
Author: Stephan Artmann, Klaus Jung, Tim Beissbarth
Maintainer: Stephan Artmann <stephanartmann@gmx.net>
Diff between miRtest versions 2.0 dated 2022-05-23 and 2.1 dated 2024-02-05
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- build/vignette.rds |binary inst/doc/miRtest.pdf |binary man/miRtest.Rd | 4 ++-- 5 files changed, 10 insertions(+), 10 deletions(-)
Title: Predictions, Comparisons, Slopes, Marginal Means, and Hypothesis
Tests
Description: Compute and plot predictions, slopes, marginal means, and comparisons (contrasts, risk ratios, odds, etc.) for over 100 classes of statistical and machine learning models in R. Conduct linear and non-linear hypothesis tests, or equivalence tests. Calculate uncertainty estimates using the delta method, bootstrapping, or simulation-based inference.
Author: Vincent Arel-Bundock [aut, cre, cph]
,
Marcio Augusto Diniz [ctb] ,
Noah Greifer [ctb] ,
Etienne Bacher [ctb]
Maintainer: Vincent Arel-Bundock <vincent.arel-bundock@umontreal.ca>
Diff between marginaleffects versions 0.17.0 dated 2023-12-09 and 0.18.0 dated 2024-02-05
marginaleffects-0.17.0/marginaleffects/R/marginal_means.R |only marginaleffects-0.17.0/marginaleffects/R/summary.R |only marginaleffects-0.17.0/marginaleffects/inst/tinytest/stata |only marginaleffects-0.17.0/marginaleffects/inst/tinytest/test-summary.R |only marginaleffects-0.17.0/marginaleffects/inst/tinytest/test-tidy-predictions.R |only marginaleffects-0.17.0/marginaleffects/inst/tinytest/test-tidy.R |only marginaleffects-0.17.0/marginaleffects/inst/tinytest/test-vignettes.R |only marginaleffects-0.17.0/marginaleffects/man/expect_marginal_means.Rd |only marginaleffects-0.17.0/marginaleffects/man/plot_cap.Rd |only marginaleffects-0.17.0/marginaleffects/man/plot_cco.Rd |only marginaleffects-0.17.0/marginaleffects/man/plot_cme.Rd |only marginaleffects-0.18.0/marginaleffects/DESCRIPTION | 78 +- marginaleffects-0.18.0/marginaleffects/MD5 | 277 +++----- marginaleffects-0.18.0/marginaleffects/NAMESPACE | 17 marginaleffects-0.18.0/marginaleffects/NEWS.md | 37 + marginaleffects-0.18.0/marginaleffects/R/broom.R | 62 - marginaleffects-0.18.0/marginaleffects/R/comparisons.R | 7 marginaleffects-0.18.0/marginaleffects/R/datagrid.R | 98 +- marginaleffects-0.18.0/marginaleffects/R/deprecated.R |only marginaleffects-0.18.0/marginaleffects/R/get_averages.R | 14 marginaleffects-0.18.0/marginaleffects/R/get_coef.R | 1 marginaleffects-0.18.0/marginaleffects/R/get_se_delta.R | 3 marginaleffects-0.18.0/marginaleffects/R/hypotheses.R | 10 marginaleffects-0.18.0/marginaleffects/R/hypotheses_joint.R | 11 marginaleffects-0.18.0/marginaleffects/R/mean_or_mode.R | 5 marginaleffects-0.18.0/marginaleffects/R/methods_dataframe.R | 2 marginaleffects-0.18.0/marginaleffects/R/methods_stats.R | 12 marginaleffects-0.18.0/marginaleffects/R/methods_survey.R | 21 marginaleffects-0.18.0/marginaleffects/R/plot_comparisons.R | 15 marginaleffects-0.18.0/marginaleffects/R/plot_predictions.R | 14 marginaleffects-0.18.0/marginaleffects/R/plot_slopes.R | 15 marginaleffects-0.18.0/marginaleffects/R/predictions.R | 11 marginaleffects-0.18.0/marginaleffects/R/print.R | 7 marginaleffects-0.18.0/marginaleffects/R/sanitize_newdata.R | 2 marginaleffects-0.18.0/marginaleffects/R/sanitize_variables.R | 44 - marginaleffects-0.18.0/marginaleffects/R/sanity_model.R | 1 marginaleffects-0.18.0/marginaleffects/R/set_coef.R | 5 marginaleffects-0.18.0/marginaleffects/R/slopes.R | 28 marginaleffects-0.18.0/marginaleffects/R/tinytest.R | 51 - marginaleffects-0.18.0/marginaleffects/R/type_dictionary.R | 5 marginaleffects-0.18.0/marginaleffects/R/utils.R | 22 marginaleffects-0.18.0/marginaleffects/README.md | 38 - marginaleffects-0.18.0/marginaleffects/inst/WORDLIST | 1 marginaleffects-0.18.0/marginaleffects/inst/tinytest/_tinysnapshot/plot_predictions-alpha.svg | 104 +-- marginaleffects-0.18.0/marginaleffects/inst/tinytest/_tinysnapshot/plot_predictions-gray.svg | 68 +- marginaleffects-0.18.0/marginaleffects/inst/tinytest/_tinysnapshot/plot_predictions.svg | 68 +- marginaleffects-0.18.0/marginaleffects/inst/tinytest/_tinysnapshot/plot_predictions_conf_40.svg | 52 - marginaleffects-0.18.0/marginaleffects/inst/tinytest/_tinysnapshot/plot_predictions_conf_99.svg | 28 marginaleffects-0.18.0/marginaleffects/inst/tinytest/_tinysnapshot/plot_slopes_continuous.svg | 30 marginaleffects-0.18.0/marginaleffects/inst/tinytest/_tinysnapshot/plot_slopes_two_conditions.svg | 44 - marginaleffects-0.18.0/marginaleffects/inst/tinytest/helpers.R | 2 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-bugfix.R | 11 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-by.R | 36 - marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-comparisons-interaction.R | 24 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-contrast.R | 14 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-df.R | 11 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-elasticity.R | 10 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-equivalence.R | 8 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-gformula.R | 6 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-hypotheses.R | 5 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-hypotheses_joint.R | 12 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-hypothesis.R | 43 - marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-inferences.R | 4 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-interaction.R | 10 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-jss.R |only marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-marginal_means.R | 117 --- marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-p_adjust.R | 8 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-AER.R | 12 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-Amelia.R | 17 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-MASS.R | 23 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-afex.R | 14 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-betareg.R | 8 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-brms.R | 229 ++---- marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-crch.R | 9 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-estimatr.R | 1 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-fixest.R | 2 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-gam.R | 17 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-gamlss.R | 9 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-glmmTMB.R | 39 - marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-ivreg.R | 10 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-lme4.R | 9 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-lmerTest.R | 6 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-mhurdle.R | 3 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-mice.R | 19 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-mvgam.R |only marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-nlme.R | 3 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-nnet.R | 16 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-ordinal.R | 7 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-plm.R | 14 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-pscl.R | 16 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-quantreg.R | 9 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-speedglm.R | 4 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-stats.R | 29 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-pkg-truncreg.R | 5 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-plot_comparisons.R | 8 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-plot_predictions.R | 20 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-plot_slopes.R | 6 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-predict_type.R | 1 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-predictions.R | 21 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-print.R | 2 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-tinytest.R | 2 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-transform_pre.R | 50 - marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-variables.R | 21 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-vcov.R | 27 marginaleffects-0.18.0/marginaleffects/inst/tinytest/test-weights.R | 26 marginaleffects-0.18.0/marginaleffects/man/comparisons.Rd | 12 marginaleffects-0.18.0/marginaleffects/man/datagrid.Rd | 51 - marginaleffects-0.18.0/marginaleffects/man/datagridcf.Rd |only marginaleffects-0.18.0/marginaleffects/man/deltamethod.Rd | 20 marginaleffects-0.18.0/marginaleffects/man/get_averages.Rd | 8 marginaleffects-0.18.0/marginaleffects/man/get_coef.Rd | 2 marginaleffects-0.18.0/marginaleffects/man/get_group_names.Rd | 2 marginaleffects-0.18.0/marginaleffects/man/get_predict.Rd | 2 marginaleffects-0.18.0/marginaleffects/man/get_vcov.Rd | 2 marginaleffects-0.18.0/marginaleffects/man/hypotheses.Rd | 4 marginaleffects-0.18.0/marginaleffects/man/marginal_means.Rd | 332 ---------- marginaleffects-0.18.0/marginaleffects/man/marginaleffects.Rd | 6 marginaleffects-0.18.0/marginaleffects/man/marginalmeans.Rd | 325 --------- marginaleffects-0.18.0/marginaleffects/man/meffects.Rd | 6 marginaleffects-0.18.0/marginaleffects/man/plot_comparisons.Rd | 5 marginaleffects-0.18.0/marginaleffects/man/plot_predictions.Rd | 8 marginaleffects-0.18.0/marginaleffects/man/plot_slopes.Rd | 6 marginaleffects-0.18.0/marginaleffects/man/predictions.Rd | 8 marginaleffects-0.18.0/marginaleffects/man/print.marginaleffects.Rd | 4 marginaleffects-0.18.0/marginaleffects/man/sanitize_model_specific.Rd | 17 marginaleffects-0.18.0/marginaleffects/man/slopes.Rd | 9 marginaleffects-0.18.0/marginaleffects/tests/tinytest.R | 4 127 files changed, 1028 insertions(+), 2148 deletions(-)
More information about marginaleffects at CRAN
Permanent link
Title: Gaussian Process Laboratory
Description: Gaussian process regression with an emphasis on kernels.
Quantitative and qualitative inputs are accepted. Some pre-defined
kernels are available, such as radial or tensor-sum for
quantitative inputs, and compound symmetry, low rank, group kernel
for qualitative inputs. The user can define new kernels and
composite kernels through a formula mechanism. Useful methods
include parameter estimation by maximum likelihood, simulation,
prediction and leave-one-out validation.
Author: Yves Deville, David Ginsbourger, Olivier Roustant. Contributors: Nicolas Durrande.
Maintainer: Olivier Roustant <roustant@insa-toulouse.fr>
Diff between kergp versions 0.5.5 dated 2021-03-18 and 0.5.7 dated 2024-02-05
kergp-0.5.5/kergp/inst/doc/index.html |only kergp-0.5.7/kergp/DESCRIPTION | 8 kergp-0.5.7/kergp/MD5 | 33 +-- kergp-0.5.7/kergp/R/checkGrad.R | 2 kergp-0.5.7/kergp/R/covQual.R | 4 kergp-0.5.7/kergp/build/partial.rdb |binary kergp-0.5.7/kergp/inst/doc/OptimMLE.pdf |binary kergp-0.5.7/kergp/inst/doc/beam.pdf |binary kergp-0.5.7/kergp/inst/doc/groupKernel.pdf |binary kergp-0.5.7/kergp/man/checkGrad.Rd | 3 kergp-0.5.7/kergp/man/covQualNested.Rd | 4 kergp-0.5.7/kergp/man/k1Funs.Rd | 4 kergp-0.5.7/kergp/man/kGauss.Rd | 2 kergp-0.5.7/kergp/man/kMatern.Rd | 2 kergp-0.5.7/kergp/man/kergp-package.Rd | 7 kergp-0.5.7/kergp/man/plot.gp.Rd | 272 ++++++++++++++--------------- kergp-0.5.7/kergp/man/prinKrige.Rd | 3 kergp-0.5.7/kergp/man/simulate.gp.Rd | 6 18 files changed, 172 insertions(+), 178 deletions(-)
Title: Process Data from the Social Networks and Fertility Survey
Description: Processes data from The Social Networks and Fertility Survey,
downloaded from <https://dataarchive.lissdata.nl>, including correcting
respondent errors and transforming network data into network objects to
facilitate analyses and visualisation.
Author: Gert Stulp [aut, cre]
Maintainer: Gert Stulp <g.stulp@rug.nl>
Diff between FertNet versions 0.1.1 dated 2023-03-16 and 0.1.2 dated 2024-02-05
DESCRIPTION | 14 ++++++++------ MD5 | 8 +++++--- NEWS.md | 8 ++++++++ R/zzz.R |only README.md | 52 +++++++++++++++++++++++++++++++++++++++++++++------- inst |only 6 files changed, 66 insertions(+), 16 deletions(-)
Title: Official 'eodhd' API R Financial Library
Description: Official 'eodhd' API R Library. It helps to get and work with financial data,
historical data and etc. API reference available at <https://eodhd.com/financial-apis/>.
Author: EODHD Maintainer [cph, aut, cre]
Maintainer: EODHD Maintainer <support@eodhistoricaldata.com>
Diff between eodhd versions 1.0.3 dated 2023-12-17 and 1.0.4 dated 2024-02-05
DESCRIPTION | 14 ++++++-------- MD5 | 4 ++-- R/StockMarketTickDataAPI.R | 10 ++++------ 3 files changed, 12 insertions(+), 16 deletions(-)
Title: Confidence Intervals for Coefficient Alpha and Standardized
Alpha
Description: Calculate confidence intervals for alpha and standardized
alpha using asymptotic theory or the studentized bootstrap, with or
without transformations. Supports the asymptotic distribution-free
method of Maydeu-Olivares, et al. (2007)
<doi:10.1037/1082-989X.12.2.157>, the pseudo-elliptical method of Yuan
& Bentler (2002) <doi:10.1007/BF02294845>, and the normal method of
van Zyl et al. (1999) <doi:10.1007/BF02296146>, for both coefficient
alpha and standardized alpha.
Author: Jonas Moss [aut, cre]
Maintainer: Jonas Moss <jonas.moss.statistics@gmail.com>
Diff between alphaci versions 1.0.0 dated 2022-10-11 and 1.0.1 dated 2024-02-05
DESCRIPTION | 8 - MD5 | 14 +-- R/variance.R | 4 README.md | 85 +++++++++--------- build/vignette.rds |binary inst/doc/simulations.html | 191 ++++++++++++++++++++--------------------- inst/doc/verification.html | 205 ++++++++++++++++++++++----------------------- man/gs.Rd | 5 - 8 files changed, 254 insertions(+), 258 deletions(-)
Title: Methods for Colour Vectors and Colour Palettes
Description: Provides a comprehensive library for colour vectors and colour
palettes using a new family of colour classes (palettes_colour and
palettes_palette) that always print as hex codes with colour previews.
Capabilities include: formatting, casting and coercion, extraction and
updating of components, plotting, colour mixing arithmetic, and colour
interpolation.
Author: Michael McCarthy [aut, cre, cph]
Maintainer: Michael McCarthy <m.mccarthy1624@gmail.com>
Diff between palettes versions 0.1.1 dated 2023-01-12 and 0.2.0 dated 2024-02-05
DESCRIPTION | 14 - MD5 | 88 +++--- NAMESPACE | 2 NEWS.md | 10 R/as_tibble.R | 14 - R/colour.R | 14 - R/ggplot2-scales.R | 7 R/options.R |only R/pal_ramp.R | 15 - R/palette.R | 8 R/pillar.R | 3 R/plot.R | 19 - R/pretty.R | 28 +- R/print.R | 33 ++ R/scales-colour-mapping.R | 3 R/symbol.R |only R/sysdata.rda |binary R/utils.R | 7 R/vctrs-arithmetic.R | 11 R/vctrs-math.R | 7 R/zzz.R |only README.md | 24 + inst/doc/biscale.R | 2 inst/doc/biscale.html | 2 inst/doc/compatibility.R | 2 inst/doc/ggplot2.R | 6 inst/doc/ggplot2.html | 2 inst/doc/gt.R | 2 inst/doc/gt.html | 535 ++++++++++++++++++++++----------------- inst/doc/palettes.R | 37 ++ inst/doc/palettes.Rmd | 70 ++++- inst/doc/palettes.html | 67 ++++ man/as_tibble.palettes_colour.Rd | 16 - man/colour-mixing-arithmetic.Rd | 11 man/colour-mixing-math.Rd | 7 man/list_colour_symbols.Rd |only man/pal_colour.Rd | 6 man/pal_numeric.Rd | 3 man/pal_palette.Rd | 8 man/pal_ramp.Rd | 17 - man/palettes-options.Rd |only man/plot.palettes_colour.Rd | 19 - man/scale_colour_palette_d.Rd | 10 tests/testthat/_snaps/colour.md | 172 ++++++++++++ tests/testthat/_snaps/symbol.md |only tests/testthat/helper.R |only tests/testthat/test-colour.R | 55 +++- tests/testthat/test-symbol.R |only vignettes/palettes.Rmd | 70 ++++- 49 files changed, 1015 insertions(+), 411 deletions(-)
Title: Online Change Point Detection for Matrix-Valued Time Series
Description: We provide two algorithms for monitoring change points with online matrix-valued time series, under the assumption of a two-way factor structure. The algorithms are based on different calculations of the second moment matrices. One is based on stacking the columns of matrix observations, while another is by a more delicate projected approach. A well-known fact is that, in the presence of a change point, a factor model can be rewritten as a model with a larger number of common factors. In turn, this entails that, in the presence of a change point, the number of spiked eigenvalues in the second moment matrix of the data increases. Based on this, we propose two families of procedures - one based on the fluctuations of partial sums, and one based on extreme value theory - to monitor whether the first non-spiked eigenvalue diverges after a point in time in the monitoring horizon, thereby indicating the presence of a change point. This package also provides some simple functions for detectin [...truncated...]
Author: Yong He [aut],
Xinbing Kong [aut],
Lorenzo Trapani [aut],
Long Yu [aut, cre]
Maintainer: Long Yu <yulong@mail.shufe.edu.cn>
Diff between OLCPM versions 0.1.0 dated 2023-02-27 and 0.1.1 dated 2024-02-05
OLCPM-0.1.0/OLCPM/man/test.matrix.flat.Rd |only OLCPM-0.1.0/OLCPM/man/test.matrix.proj.Rd |only OLCPM-0.1.0/OLCPM/man/test.matrix.psi.Rd |only OLCPM-0.1.1/OLCPM/DESCRIPTION | 10 OLCPM-0.1.1/OLCPM/MD5 | 36 OLCPM-0.1.1/OLCPM/NAMESPACE | 31 OLCPM-0.1.1/OLCPM/R/data.R |only OLCPM-0.1.1/OLCPM/R/function.R | 1555 +++++++++++++++++++++++-- OLCPM-0.1.1/OLCPM/data |only OLCPM-0.1.1/OLCPM/man/ITP_noproj.Rd |only OLCPM-0.1.1/OLCPM/man/ITP_proj.Rd |only OLCPM-0.1.1/OLCPM/man/KSTP.Rd |only OLCPM-0.1.1/OLCPM/man/cv.table.Rd |only OLCPM-0.1.1/OLCPM/man/gen.data.Rd | 107 - OLCPM-0.1.1/OLCPM/man/gen.psi.tau.flat.Rd | 74 - OLCPM-0.1.1/OLCPM/man/gen.psi.tau.proj.Rd | 81 - OLCPM-0.1.1/OLCPM/man/getcv.Rd | 68 - OLCPM-0.1.1/OLCPM/man/impute.linear.Rd |only OLCPM-0.1.1/OLCPM/man/kpe.Rd |only OLCPM-0.1.1/OLCPM/man/moment.determine.Rd |only OLCPM-0.1.1/OLCPM/man/moment.test.Rd |only OLCPM-0.1.1/OLCPM/man/outlier.remove.Rd |only OLCPM-0.1.1/OLCPM/man/test.multiple.robust.Rd |only OLCPM-0.1.1/OLCPM/man/test.once.flat.Rd |only OLCPM-0.1.1/OLCPM/man/test.once.flat.robust.Rd |only OLCPM-0.1.1/OLCPM/man/test.once.proj.Rd |only OLCPM-0.1.1/OLCPM/man/test.once.proj.robust.Rd |only OLCPM-0.1.1/OLCPM/man/test.once.psi.Rd |only OLCPM-0.1.1/OLCPM/man/test.once.psi.robust.Rd |only OLCPM-0.1.1/OLCPM/man/var.exp.Rd |only 30 files changed, 1730 insertions(+), 232 deletions(-)
Title: Global Surface Summary of the Day ('GSOD') Weather Data Client
Description: Provides automated downloading, parsing, cleaning, unit conversion
and formatting of Global Surface Summary of the Day ('GSOD') weather data
from the from the USA National Centers for Environmental Information
('NCEI'). Units are converted from from United States Customary System
('USCS') units to International System of Units ('SI'). Stations may be
individually checked for number of missing days defined by the user, where
stations with too many missing observations are omitted. Only stations with
valid reported latitude and longitude values are permitted in the final
data. Additional useful elements, saturation vapour pressure ('es'), actual
vapour pressure ('ea') and relative humidity ('RH') are calculated from the
original data using the improved August-Roche-Magnus approximation (Alduchov
& Eskridge 1996) and included in the final data set. The resulting metadata
include station identification information, country, state, latitude,
longitude, elevation, weather observatio [...truncated...]
Author: Adam H. Sparks [aut, cre] ,
Tomislav Hengl [aut] ,
Andrew Nelson [aut] ,
Hugh Parsonage [cph, ctb] ,
Taras Kaduk [ctb] ,
Gwenael Giboire [ctb] ,
Lukasz Pawlik [ctb] ,
Ross Darnell [ctb] ,
Tyler Widdison [ctb] ` did not
return stations in order of nea [...truncated...]
Maintainer: Adam H. Sparks <adamhsparks@gmail.com>
Diff between GSODR versions 3.1.9 dated 2023-08-22 and 3.1.10 dated 2024-02-05
GSODR-3.1.10/GSODR/DESCRIPTION | 18 GSODR-3.1.10/GSODR/MD5 | 52 +- GSODR-3.1.10/GSODR/NAMESPACE | 20 GSODR-3.1.10/GSODR/NEWS.md | 19 GSODR-3.1.10/GSODR/R/GSODR-package.R | 20 GSODR-3.1.10/GSODR/R/get_GSOD.R | 10 GSODR-3.1.10/GSODR/R/get_inventory.R | 1 GSODR-3.1.10/GSODR/R/globals.R | 55 ++ GSODR-3.1.10/GSODR/R/internal_functions.R | 11 GSODR-3.1.10/GSODR/R/nearest_stations.R | 1 GSODR-3.1.10/GSODR/R/process_csv.R | 38 - GSODR-3.1.10/GSODR/R/reformat_GSOD.R | 4 GSODR-3.1.10/GSODR/R/update_station_list.R | 1 GSODR-3.1.10/GSODR/R/zzz.R | 3 GSODR-3.1.10/GSODR/README.md | 11 GSODR-3.1.10/GSODR/build/vignette.rds |binary GSODR-3.1.10/GSODR/inst/WORDLIST | 4 GSODR-3.1.10/GSODR/inst/doc/GSODR.Rmd | 222 +++++----- GSODR-3.1.10/GSODR/inst/doc/GSODR.html | 286 +++++++------- GSODR-3.1.10/GSODR/inst/extdata/isd_diff.rda |binary GSODR-3.1.10/GSODR/inst/extdata/isd_history.rda |binary GSODR-3.1.10/GSODR/man/GSODR-package.Rd | 2 GSODR-3.1.10/GSODR/tests/testthat/test-download_files.R | 2 GSODR-3.1.10/GSODR/vignettes/Ex5-1.png |binary GSODR-3.1.10/GSODR/vignettes/GSODR.Rmd | 222 +++++----- GSODR-3.1.10/GSODR/vignettes/GSODR.Rmd.orig | 6 GSODR-3.1.10/GSODR/vignettes/GSOD_Station_locations-1.png |only GSODR-3.1.9/GSODR/vignettes/unnamed-chunk-1-1.png |only 28 files changed, 532 insertions(+), 476 deletions(-)
More information about easyDifferentialGeneCoexpression at CRAN
Permanent link
Title: Bayesian Consensus Clustering for Multiple Longitudinal Features
Description: It is very common nowadays for a study to collect multiple
features and appropriately integrating multiple longitudinal features
simultaneously for defining individual clusters becomes increasingly
crucial to understanding population heterogeneity and predicting
future outcomes. 'BCClong' implements a Bayesian consensus clustering
(BCC) model for multiple longitudinal features via a generalized
linear mixed model. Compared to existing packages, several key
features make the 'BCClong' package appealing: (a) it allows
simultaneous clustering of mixed-type (e.g., continuous, discrete and
categorical) longitudinal features, (b) it allows each longitudinal
feature to be collected from different sources with measurements taken
at distinct sets of time points (known as irregularly sampled
longitudinal data), (c) it relaxes the assumption that all features
have the same clustering structure by estimating the feature-specific
(local) clusterings and consensus (global) clustering.
Author: Zhiwen Tan [aut, cre],
Zihang Lu [ctb],
Chang Shen [ctb]
Maintainer: Zhiwen Tan <21zt9@queensu.ca>
Diff between BCClong versions 1.0.1 dated 2023-08-08 and 1.0.2 dated 2024-02-05
DESCRIPTION | 10 ++-- MD5 | 22 ++++----- NAMESPACE | 1 R/DiscrepancyMeasure.R | 2 R/bccLong.R | 1 build/vignette.rds |binary inst/doc/ContinuousData.R | 14 ++--- inst/doc/ContinuousData.html | 96 ++++++++++++++++++++--------------------- inst/doc/MixedTypeData.R | 10 ++-- inst/doc/MixedTypeData.html | 92 +++++++++++++++++++-------------------- man/BayesT.Rd | 2 tests/testthat/test-Trajplot.R | 2 12 files changed, 124 insertions(+), 128 deletions(-)
Title: Using R to Run 'JAGS'
Description: Providing wrapper functions to implement Bayesian analysis in JAGS. Some major features include monitoring convergence of a MCMC model using Rubin and Gelman Rhat statistics, automatically running a MCMC model till it converges, and implementing parallel processing of a MCMC model for multiple chains.
Author: Yu-Sung Su <suyusung@tsinghua.edu.cn>,
Masanao Yajima <yajima@bu.edu>,
Maintainer: Yu-Sung Su <suyusung@tsinghua.edu.cn>
Diff between R2jags versions 0.7-1 dated 2021-08-05 and 0.7-1.1 dated 2024-02-05
DESCRIPTION | 6 ++-- MD5 | 8 +++--- R/jags.R | 4 --- R/jags.sims.R | 75 +++++++++++++++++++++++----------------------------------- R/jags2.R | 4 --- 5 files changed, 40 insertions(+), 57 deletions(-)
Title: Running 'WinBUGS' and 'OpenBUGS' from 'R' / 'S-PLUS'
Description: Invoke a 'BUGS' model in 'OpenBUGS' or 'WinBUGS', a class "bugs" for 'BUGS'
results and functions to work with that class.
Function write.model() allows a 'BUGS' model file to be written.
The class and auxiliary functions could be used with other MCMC programs, including 'JAGS'.
Author: originally written by Andrew Gelman <gelman@stat.columbia.edu>;
changes and packaged by Sibylle Sturtz <sturtz@statistik.tu-dortmund.de>
and Uwe Ligges <ligges@statistik.tu-dortmund.de>.
With considerable contributions by Gregor Gorjanc <gregor.gorja [...truncated...]
Maintainer: Uwe Ligges <ligges@statistik.tu-dortmund.de>
Diff between R2WinBUGS versions 2.1-22 dated 2023-12-15 and 2.1-22.1 dated 2024-02-05
DESCRIPTION | 6 +++--- MD5 | 7 ++++--- R/00.R |only R/bugs.plot.summary.R | 33 ++++++++++----------------------- man/write.model.Rd | 10 +++------- 5 files changed, 20 insertions(+), 36 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-11-21 2.0.3