Title: Word Puzzle Game
Description: The word puzzle game requires you to find out the letters in a word within a limited number of guesses. In each round, if your guess hit any letters in the word, they reveal themselves. If all letters are revealed before your guesses run out, you win this game; otherwise you fail. You may run multiple games to guess different words.
Author: Xiurui Zhu [aut, cre],
@olivory [ctb]
Maintainer: Xiurui Zhu <zxr6@163.com>
Diff between wordPuzzleR versions 0.1.0 dated 2023-10-02 and 0.1.1 dated 2024-02-24
DESCRIPTION | 17 +++++++++++------ MD5 | 9 +++++---- NEWS.md |only R/main.R | 3 +-- README.md | 4 ++-- man/wordPuzzleR-package.Rd | 13 +++++++++++++ 6 files changed, 32 insertions(+), 14 deletions(-)
Title: Generalized Regression on Orthogonal Components
Description: Robust multiple or multivariate linear regression, nonparametric regression on orthogonal components, classical or robust partial least squares models as described in Bilodeau, Lafaye De Micheaux and Mahdi (2015) <doi:10.18637/jss.v065.i01>.
Author: Pierre Lafaye De Micheaux [aut, cre],
Martin Bilodeau [aut],
Jiahui Wang [cph] ,
Ruben Zamar [cph] ,
Alfio Marazzi [cph] ,
Victor Yohai [cph] ,
Matias Salibian-Barrera [cph] ,
Ricardo Maronna [cph] ,
Eric Zivot [cph] ,
David Rocke [cph] ,
Doug Martin [...truncated...]
Maintainer: Pierre Lafaye De Micheaux <lafaye@unsw.edu.au>
Diff between groc versions 1.0.8 dated 2020-12-18 and 1.0.9 dated 2024-02-24
DESCRIPTION | 8 ++++---- INDEX | 2 +- MD5 | 19 ++++++++++--------- NAMESPACE | 2 +- R/groc.R | 4 ++-- build |only inst/CITATION | 6 +++--- inst/HISTORY | 9 +++++++++ man/dcov.Rd | 2 +- man/groc.fit.Rd | 5 +++-- src/gridalgo.cpp | 3 ++- 11 files changed, 36 insertions(+), 24 deletions(-)
Title: Fast, Easy, and Visual Bayesian Inference
Description: Accelerate Bayesian analytics workflows in 'R' through interactive modelling,
visualization, and inference. Define probabilistic graphical models using directed
acyclic graphs (DAGs) as a unifying language for business stakeholders, statisticians,
and programmers. This package relies on interfacing with the 'numpyro' python package.
Author: Adam Fleischhacker [aut, cre, cph],
Daniela Dapena [ctb],
Rose Nguyen [ctb],
Jared Sharpe [ctb]
Maintainer: Adam Fleischhacker <ajf@udel.edu>
Diff between causact versions 0.5.3 dated 2023-09-05 and 0.5.4 dated 2024-02-24
DESCRIPTION | 9 ++++--- MD5 | 22 ++++++++--------- NEWS.md | 3 ++ R/dag_numpyro.R | 10 ++++---- R/data.R | 2 - R/install_causact_deps.R | 5 ++-- README.md | 47 +++++++++++++++++++++++++------------- build/vignette.rds |binary man/corruptDF.Rd | 2 - man/dag_numpyro.Rd | 2 - man/figures/chimpsGraphPost-1.png |binary man/figures/gretaPost-1.png |binary 12 files changed, 61 insertions(+), 41 deletions(-)
Title: Semi-Supervised Bayesian Mixture Models Incorporating Batch
Correction
Description: Semi-supervised and unsupervised Bayesian mixture models that
simultaneously infer the cluster/class structure and a batch correction.
Densities available are the multivariate normal and the multivariate t.
The model sampler is implemented in C++. This package is aimed at analysis of
low-dimensional data generated across several batches. See Coleman et al.
(2022) <doi:10.1101/2022.01.14.476352> for details of the model.
Author: Stephen Coleman [aut, cre],
Paul Kirk [aut],
Chris Wallace [aut]
Maintainer: Stephen Coleman <stcolema@tcd.ie>
Diff between batchmix versions 2.0.1 dated 2024-02-15 and 2.1.0 dated 2024-02-24
DESCRIPTION | 10 +++++----- MD5 | 14 +++++++++----- NAMESPACE | 25 +++++++++++++++++++------ R/VI.lb.R |only R/batchmix-package.R | 2 +- R/minVI.R |only R/predictFromMultipleChains.R | 5 ++--- man/VI.lb.Rd |only man/batchmix-package.Rd | 9 +++++++++ man/minVI.Rd |only 10 files changed, 45 insertions(+), 20 deletions(-)
Title: Genomic Prediction of Hybrid Performance
Description: Performs genomic prediction of hybrid performance using eight GS methods including GBLUP, BayesB, RKHS, PLS, LASSO, Elastic net, LightGBM and XGBoost. It also provides fast cross-validation and mating design scheme for training population (Xu S et al (2016) <doi:10.1111/tpj.13242>; Xu S (2017) <doi:10.1534/g3.116.038059>).
Author: Yang Xu, Guangning Yu, Yanru Cui, Shizhong Xu, Chenwu Xu
Maintainer: Yang Xu <xuyang_89@126.com>
Diff between predhy versions 1.2.1 dated 2022-11-08 and 2.0.1 dated 2024-02-24
predhy-1.2.1/predhy/R/hybrid.predict_NCII.R |only predhy-2.0.1/predhy/DESCRIPTION | 12 predhy-2.0.1/predhy/MD5 | 18 predhy-2.0.1/predhy/NAMESPACE | 3 predhy-2.0.1/predhy/R/cv.R | 278 ++++++--- predhy-2.0.1/predhy/R/import_packages.R | 2 predhy-2.0.1/predhy/R/predhy.predict.R | 702 ++++++++++++++++++++++--- predhy-2.0.1/predhy/R/predhy.predict_NCII.R |only predhy-2.0.1/predhy/man/cv.Rd | 9 predhy-2.0.1/predhy/man/predhy.predict.Rd | 9 predhy-2.0.1/predhy/man/predhy.predict_NCII.Rd | 11 11 files changed, 836 insertions(+), 208 deletions(-)
Title: Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian
Models
Description: Efficient approximate leave-one-out cross-validation (LOO)
for Bayesian models fit using Markov chain Monte Carlo, as
described in Vehtari, Gelman, and Gabry (2017)
<doi:10.1007/s11222-016-9696-4>.
The approximation uses Pareto smoothed importance sampling (PSIS),
a new procedure for regularizing importance weights.
As a byproduct of the calculations, we also obtain approximate
standard errors for estimated predictive errors and for the comparison
of predictive errors between models. The package also provides methods
for using stacking and other model weighting techniques to average
Bayesian predictive distributions.
Author: Aki Vehtari [aut],
Jonah Gabry [cre, aut],
Mans Magnusson [aut],
Yuling Yao [aut],
Paul-Christian Buerkner [aut],
Topi Paananen [aut],
Andrew Gelman [aut],
Ben Goodrich [ctb],
Juho Piironen [ctb],
Bruno Nicenboim [ctb],
Leevi Lindgren [ctb]
Maintainer: Jonah Gabry <jsg2201@columbia.edu>
Diff between loo versions 2.6.0 dated 2023-03-31 and 2.7.0 dated 2024-02-24
loo-2.6.0/loo/man/importance_sampling.array.Rd |only loo-2.6.0/loo/man/importance_sampling.default.Rd |only loo-2.6.0/loo/man/importance_sampling.matrix.Rd |only loo-2.7.0/loo/DESCRIPTION | 17 loo-2.7.0/loo/MD5 | 230 +-- loo-2.7.0/loo/NAMESPACE | 19 loo-2.7.0/loo/NEWS.md | 58 loo-2.7.0/loo/R/E_loo.R | 134 +- loo-2.7.0/loo/R/crps.R | 6 loo-2.7.0/loo/R/diagnostics.R | 229 ++- loo-2.7.0/loo/R/effective_sample_sizes.R | 33 loo-2.7.0/loo/R/elpd.R | 2 loo-2.7.0/loo/R/gpdfit.R | 4 loo-2.7.0/loo/R/importance_sampling.R | 62 - loo-2.7.0/loo/R/loo-glossary.R | 71 - loo-2.7.0/loo/R/loo-package.R | 4 loo-2.7.0/loo/R/loo.R | 86 - loo-2.7.0/loo/R/loo_approximate_posterior.R | 5 loo-2.7.0/loo/R/loo_compare.R | 82 + loo-2.7.0/loo/R/loo_compare.psis_loo_ss_list.R | 1 loo-2.7.0/loo/R/loo_model_weights.R | 2 loo-2.7.0/loo/R/loo_moment_matching.R | 35 loo-2.7.0/loo/R/loo_predictive_metric.R | 2 loo-2.7.0/loo/R/loo_subsample.R | 91 - loo-2.7.0/loo/R/pointwise.R |only loo-2.7.0/loo/R/print.R | 49 loo-2.7.0/loo/R/psis.R | 53 loo-2.7.0/loo/R/tis.R | 18 loo-2.7.0/loo/R/waic.R | 2 loo-2.7.0/loo/build/partial.rdb |binary loo-2.7.0/loo/build/vignette.rds |binary loo-2.7.0/loo/inst/doc/loo2-elpd.R | 4 loo-2.7.0/loo/inst/doc/loo2-elpd.Rmd | 4 loo-2.7.0/loo/inst/doc/loo2-elpd.html | 192 +-- loo-2.7.0/loo/inst/doc/loo2-example.R | 4 loo-2.7.0/loo/inst/doc/loo2-example.Rmd | 19 loo-2.7.0/loo/inst/doc/loo2-example.html | 178 +- loo-2.7.0/loo/inst/doc/loo2-large-data.R | 28 loo-2.7.0/loo/inst/doc/loo2-large-data.Rmd | 42 loo-2.7.0/loo/inst/doc/loo2-large-data.html | 412 +++--- loo-2.7.0/loo/inst/doc/loo2-lfo.R | 10 loo-2.7.0/loo/inst/doc/loo2-lfo.Rmd | 18 loo-2.7.0/loo/inst/doc/loo2-lfo.html | 594 +++++----- loo-2.7.0/loo/inst/doc/loo2-mixis.R | 47 loo-2.7.0/loo/inst/doc/loo2-mixis.Rmd | 41 loo-2.7.0/loo/inst/doc/loo2-mixis.html | 211 +-- loo-2.7.0/loo/inst/doc/loo2-moment-matching.R | 4 loo-2.7.0/loo/inst/doc/loo2-moment-matching.Rmd | 10 loo-2.7.0/loo/inst/doc/loo2-moment-matching.html | 304 ++--- loo-2.7.0/loo/inst/doc/loo2-non-factorized.Rmd | 11 loo-2.7.0/loo/inst/doc/loo2-non-factorized.html | 497 ++++---- loo-2.7.0/loo/inst/doc/loo2-weights.Rmd | 2 loo-2.7.0/loo/inst/doc/loo2-weights.html | 325 ++--- loo-2.7.0/loo/inst/doc/loo2-with-rstan.R | 10 loo-2.7.0/loo/inst/doc/loo2-with-rstan.Rmd | 21 loo-2.7.0/loo/inst/doc/loo2-with-rstan.html | 103 - loo-2.7.0/loo/man/E_loo.Rd | 33 loo-2.7.0/loo/man/compare.Rd | 2 loo-2.7.0/loo/man/crps.Rd | 4 loo-2.7.0/loo/man/dot-compute_point_estimate.Rd | 8 loo-2.7.0/loo/man/dot-ndraws.Rd | 6 loo-2.7.0/loo/man/dot-thin_draws.Rd | 9 loo-2.7.0/loo/man/importance_sampling.Rd | 48 loo-2.7.0/loo/man/loo-glossary.Rd | 69 - loo-2.7.0/loo/man/loo-package.Rd | 43 loo-2.7.0/loo/man/loo.Rd | 48 loo-2.7.0/loo/man/loo_approximate_posterior.Rd | 6 loo-2.7.0/loo/man/loo_compare.Rd | 27 loo-2.7.0/loo/man/loo_model_weights.Rd | 4 loo-2.7.0/loo/man/loo_moment_match.Rd | 5 loo-2.7.0/loo/man/loo_predictive_metric.Rd | 2 loo-2.7.0/loo/man/loo_subsample.Rd | 37 loo-2.7.0/loo/man/parallel_psis_list.Rd | 20 loo-2.7.0/loo/man/pareto-k-diagnostic.Rd | 133 +- loo-2.7.0/loo/man/pointwise.Rd |only loo-2.7.0/loo/man/psis.Rd | 20 loo-2.7.0/loo/man/psis_approximate_posterior.Rd | 11 loo-2.7.0/loo/man/psislw.Rd | 2 loo-2.7.0/loo/man/sis.Rd | 2 loo-2.7.0/loo/man/tis.Rd | 18 loo-2.7.0/loo/man/update.psis_loo_ss.Rd | 15 loo-2.7.0/loo/man/waic.Rd | 4 loo-2.7.0/loo/tests/testthat/reference-results/E_loo_default_mean.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/E_loo_default_quantile_10_50_90.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/E_loo_default_quantile_50.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/E_loo_default_sd.rds |only loo-2.7.0/loo/tests/testthat/reference-results/E_loo_default_var.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/E_loo_matrix_mean.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/E_loo_matrix_quantile_10_90.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/E_loo_matrix_quantile_50.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/E_loo_matrix_sd.rds |only loo-2.7.0/loo/tests/testthat/reference-results/E_loo_matrix_var.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/loo.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/mcse_loo.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/moment_match_loo_1.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/moment_match_loo_2.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/moment_match_loo_3.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/moment_match_var_and_cov.rds |binary loo-2.7.0/loo/tests/testthat/reference-results/psis.rds |binary loo-2.7.0/loo/tests/testthat/test_E_loo.R | 50 loo-2.7.0/loo/tests/testthat/test_compare.R | 8 loo-2.7.0/loo/tests/testthat/test_crps.R | 9 loo-2.7.0/loo/tests/testthat/test_loo_and_waic.R | 13 loo-2.7.0/loo/tests/testthat/test_loo_moment_matching.R | 16 loo-2.7.0/loo/tests/testthat/test_loo_subsampling.R | 36 loo-2.7.0/loo/tests/testthat/test_model_weighting.R | 2 loo-2.7.0/loo/tests/testthat/test_pointwise.R |only loo-2.7.0/loo/tests/testthat/test_print_plot.R | 35 loo-2.7.0/loo/tests/testthat/test_psis.R | 32 loo-2.7.0/loo/tests/testthat/test_psis_approximate_posterior.R | 2 loo-2.7.0/loo/tests/testthat/test_tisis.R | 32 loo-2.7.0/loo/vignettes/loo2-elpd.Rmd | 4 loo-2.7.0/loo/vignettes/loo2-example.Rmd | 19 loo-2.7.0/loo/vignettes/loo2-large-data.Rmd | 42 loo-2.7.0/loo/vignettes/loo2-lfo.Rmd | 18 loo-2.7.0/loo/vignettes/loo2-mixis.Rmd | 41 loo-2.7.0/loo/vignettes/loo2-moment-matching.Rmd | 10 loo-2.7.0/loo/vignettes/loo2-non-factorized.Rmd | 11 loo-2.7.0/loo/vignettes/loo2-weights.Rmd | 2 loo-2.7.0/loo/vignettes/loo2-with-rstan.Rmd | 21 120 files changed, 2944 insertions(+), 2421 deletions(-)
Title: Creates Log Files
Description: Contains functions to help create log files. The
package aims to overcome the difficulty of the base R sink() command. The
log_print() function will print to both the console and the file log,
without interfering in other write operations.
Author: David Bosak [aut, cre],
Rikard Isaksson [ctb]
Maintainer: David Bosak <dbosak01@gmail.com>
Diff between logr versions 1.3.5 dated 2023-11-09 and 1.3.6 dated 2024-02-24
logr-1.3.5/logr/tests/testthat/log/test.msg |only logr-1.3.6/logr/DESCRIPTION | 8 logr-1.3.6/logr/MD5 | 48 +- logr-1.3.6/logr/NAMESPACE | 1 logr-1.3.6/logr/NEWS.md | 5 logr-1.3.6/logr/R/logr.R | 85 +-- logr-1.3.6/logr/R/utilities.R | 23 - logr-1.3.6/logr/build/vignette.rds |binary logr-1.3.6/logr/inst/doc/logr-faq.Rmd | 42 - logr-1.3.6/logr/inst/doc/logr-faq.html | 35 - logr-1.3.6/logr/inst/doc/logr-features.Rmd | 5 logr-1.3.6/logr/inst/doc/logr-features.html | 6 logr-1.3.6/logr/man/log_close.Rd | 9 logr-1.3.6/logr/man/log_warning.Rd |only logr-1.3.6/logr/man/logr.Rd | 17 logr-1.3.6/logr/tests/testthat/fork |only logr-1.3.6/logr/tests/testthat/log/test-logr.log | 16 logr-1.3.6/logr/tests/testthat/log/test.log | 30 - logr-1.3.6/logr/tests/testthat/log/test11.log | 24 - logr-1.3.6/logr/tests/testthat/log/test12.log | 22 logr-1.3.6/logr/tests/testthat/log/test13.log | 22 logr-1.3.6/logr/tests/testthat/log/test29.log | 17 logr-1.3.6/logr/tests/testthat/test-logr.R | 513 +++++++++++------------ logr-1.3.6/logr/tests/testthat/test-utilities.R | 8 logr-1.3.6/logr/vignettes/logr-faq.Rmd | 42 - logr-1.3.6/logr/vignettes/logr-features.Rmd | 5 26 files changed, 445 insertions(+), 538 deletions(-)
Title: 'NoSQL' Database Connector
Description: Simplified document database access and manipulation,
providing a common API across supported 'NoSQL' databases
'Elasticsearch', 'CouchDB', 'MongoDB' as well as
'SQLite/JSON1', 'PostgreSQL', and 'DuckDB'.
Author: Ralf Herold [aut, cre] ,
Scott Chamberlain [aut] ,
Rich FitzJohn [aut],
Jeroen Ooms [aut]
Maintainer: Ralf Herold <ralf.herold@mailbox.org>
Diff between nodbi versions 0.10.1 dated 2024-02-04 and 0.10.2 dated 2024-02-24
DESCRIPTION | 9 +-- MD5 | 25 +++++---- NEWS.md | 17 +++++- R/create.R | 6 +- R/query.R | 122 ++++++++++++++------------------------------ R/src.R | 2 R/update.R | 19 +++++- R/zzz.R | 28 ++++------ build |only inst/doc |only man/src.Rd | 1 tests/testthat/core-nodbi.R | 33 ++++++++++- tests/testthat/helper.R | 3 + vignettes |only 14 files changed, 142 insertions(+), 123 deletions(-)
Title: Randomization-Based Inference
Description: Randomization-Based Inference for customized experiments.
Computes Fisher-Exact P-Values alongside null randomization
distributions. Retrieves counternull sets and generates counternull
distributions. Computes Fisher Intervals and Fisher-Adjusted P-Values.
Package includes visualization of randomization distributions and Fisher
Intervals. Users can input custom test statistics and their own methods for
randomization.
Rosenthal and Rubin (1994) <doi:10.1111/j.1467-9280.1994.tb00281.x>.
Author: Mabene Yasmine [aut, cre],
Bind Marie [aut],
Harvard University [cph]
Maintainer: Mabene Yasmine <ymabene@stanford.edu>
Diff between Counternull versions 0.2.1 dated 2024-02-21 and 0.2.12 dated 2024-02-24
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 5 +++++ R/create_fisher_interval.R | 2 +- R/fisher_binary.R | 11 ++++++----- inst/doc/counternull_vignette.html | 10 +++++----- 6 files changed, 25 insertions(+), 19 deletions(-)
Title: Easily Send HTML Email Messages
Description: Compose and send out responsive HTML email messages that render
perfectly across a range of email clients and device sizes. Helper functions
let the user insert embedded images, web link buttons, and 'ggplot2' plot
objects into the message body. Messages can be sent through an 'SMTP'
server, through the 'RStudio Connect' service, or through the 'Mailgun' API
service <https://www.mailgun.com/>.
Author: Richard Iannone [aut, cre] ,
Joe Cheng [aut],
Jeroen Ooms [ctb] ,
Ted Goas [cph] ,
Posit Software, PBC [cph, fnd]
Maintainer: Richard Iannone <rich@posit.co>
Diff between blastula versions 0.3.4 dated 2023-09-23 and 0.3.5 dated 2024-02-24
blastula-0.3.4/blastula/inst/examples/connect-example-email.html |only blastula-0.3.4/blastula/man/figures |only blastula-0.3.4/blastula/tests/spelling.R |only blastula-0.3.5/blastula/DESCRIPTION | 21 ++++---- blastula-0.3.5/blastula/LICENSE | 4 - blastula-0.3.5/blastula/MD5 | 19 ++----- blastula-0.3.5/blastula/NEWS.md | 4 + blastula-0.3.5/blastula/R/mime.R | 4 - blastula-0.3.5/blastula/R/smtp_send.R | 14 +++++ blastula-0.3.5/blastula/man/smtp_send.Rd | 9 +++ blastula-0.3.5/blastula/tests/testthat/test-mime.R | 24 ++++++++++ 11 files changed, 70 insertions(+), 29 deletions(-)
Title: Collecting Twitter Data
Description: An implementation of calls designed to collect and organize
Twitter data via Twitter's REST and stream Application Program
Interfaces (API), which can be found at the following URL:
<https://developer.twitter.com/en/docs>.
Author: Michael W. Kearney [aut] ,
Lluis Revilla Sancho [aut, cre]
,
Hadley Wickham [aut] ,
Andrew Heiss [rev] ,
Francois Briatte [rev],
Jonathan Sidi [ctb]
Maintainer: Lluis Revilla Sancho <lluis.revilla@gmail.com>
Diff between rtweet versions 1.2.1 dated 2023-10-16 and 2.0.0 dated 2024-02-24
rtweet-1.2.1/rtweet/tests/testthat/_snaps/collections.md |only rtweet-1.2.1/rtweet/tests/testthat/_snaps/post-tweet.md |only rtweet-1.2.1/rtweet/tests/testthat/_snaps/premium.md |only rtweet-1.2.1/rtweet/tests/testthat/_snaps/search_tweets.md |only rtweet-1.2.1/rtweet/tests/testthat/_snaps/timeline.md |only rtweet-1.2.1/rtweet/tests/testthat/_snaps/user_id.md |only rtweet-1.2.1/rtweet/tests/testthat/test-block.R |only rtweet-1.2.1/rtweet/tests/testthat/test-clean_tweets.R |only rtweet-1.2.1/rtweet/tests/testthat/test-collections.R |only rtweet-1.2.1/rtweet/tests/testthat/test-direct_messages.R |only rtweet-1.2.1/rtweet/tests/testthat/test-extractors.R |only rtweet-1.2.1/rtweet/tests/testthat/test-favorites.R |only rtweet-1.2.1/rtweet/tests/testthat/test-followers.R |only rtweet-1.2.1/rtweet/tests/testthat/test-friends.R |only rtweet-1.2.1/rtweet/tests/testthat/test-graph-network.R |only rtweet-1.2.1/rtweet/tests/testthat/test-http.R |only rtweet-1.2.1/rtweet/tests/testthat/test-list_followers.R |only rtweet-1.2.1/rtweet/tests/testthat/test-list_tweets.R |only rtweet-1.2.1/rtweet/tests/testthat/test-lists_members.R |only rtweet-1.2.1/rtweet/tests/testthat/test-lists_memberships.R |only rtweet-1.2.1/rtweet/tests/testthat/test-lists_statuses.R |only rtweet-1.2.1/rtweet/tests/testthat/test-lists_subscribers.R |only rtweet-1.2.1/rtweet/tests/testthat/test-lists_subscriptions.R |only rtweet-1.2.1/rtweet/tests/testthat/test-lists_users.R |only rtweet-1.2.1/rtweet/tests/testthat/test-mentions.R |only rtweet-1.2.1/rtweet/tests/testthat/test-methods.R |only rtweet-1.2.1/rtweet/tests/testthat/test-post-block.R |only rtweet-1.2.1/rtweet/tests/testthat/test-post-favorite.R |only rtweet-1.2.1/rtweet/tests/testthat/test-post-message.R |only rtweet-1.2.1/rtweet/tests/testthat/test-post-tweet.R |only rtweet-1.2.1/rtweet/tests/testthat/test-post-user.R |only rtweet-1.2.1/rtweet/tests/testthat/test-premium.R |only rtweet-1.2.1/rtweet/tests/testthat/test-rate_limit.R |only rtweet-1.2.1/rtweet/tests/testthat/test-rbind.R |only rtweet-1.2.1/rtweet/tests/testthat/test-retweets.R |only rtweet-1.2.1/rtweet/tests/testthat/test-save_as_csv.R |only rtweet-1.2.1/rtweet/tests/testthat/test-search_tweets.R |only rtweet-1.2.1/rtweet/tests/testthat/test-search_users.R |only rtweet-1.2.1/rtweet/tests/testthat/test-statuses.R |only rtweet-1.2.1/rtweet/tests/testthat/test-subset.R |only rtweet-1.2.1/rtweet/tests/testthat/test-timeline.R |only rtweet-1.2.1/rtweet/tests/testthat/test-trends.R |only rtweet-1.2.1/rtweet/tests/testthat/test-ts_plot.R |only rtweet-1.2.1/rtweet/tests/testthat/test-tweet_get.R |only rtweet-1.2.1/rtweet/tests/testthat/test-tweet_object.R |only rtweet-1.2.1/rtweet/tests/testthat/test-tweet_shot.R |only rtweet-1.2.1/rtweet/tests/testthat/test-tweet_threading.R |only rtweet-1.2.1/rtweet/tests/testthat/test-user_id.R |only rtweet-1.2.1/rtweet/tests/testthat/test-users.R |only rtweet-2.0.0/rtweet/DESCRIPTION | 12 rtweet-2.0.0/rtweet/MD5 | 358 ++++------ rtweet-2.0.0/rtweet/NAMESPACE | 5 rtweet-2.0.0/rtweet/NEWS.md | 13 rtweet-2.0.0/rtweet/R/api_v2_responses.R | 15 rtweet-2.0.0/rtweet/R/api_v2_utils.R | 64 + rtweet-2.0.0/rtweet/R/auth.R | 204 +++-- rtweet-2.0.0/rtweet/R/auth_clean.R |only rtweet-2.0.0/rtweet/R/auth_sitrep.R | 21 rtweet-2.0.0/rtweet/R/bearer_token.R | 5 rtweet-2.0.0/rtweet/R/clean_tweets.R | 14 rtweet-2.0.0/rtweet/R/client.R | 55 - rtweet-2.0.0/rtweet/R/collections.R | 4 rtweet-2.0.0/rtweet/R/compliance.R | 18 rtweet-2.0.0/rtweet/R/coords.R | 6 rtweet-2.0.0/rtweet/R/data.R | 6 rtweet-2.0.0/rtweet/R/deprecated.R |only rtweet-2.0.0/rtweet/R/direct_messages.R | 20 rtweet-2.0.0/rtweet/R/do_call_rbind.R | 25 rtweet-2.0.0/rtweet/R/entities.R | 13 rtweet-2.0.0/rtweet/R/expansions.R | 13 rtweet-2.0.0/rtweet/R/extractors.R | 16 rtweet-2.0.0/rtweet/R/favorites.R | 14 rtweet-2.0.0/rtweet/R/fields.R | 9 rtweet-2.0.0/rtweet/R/followers.R | 10 rtweet-2.0.0/rtweet/R/friends.R | 10 rtweet-2.0.0/rtweet/R/graph-network.R | 27 rtweet-2.0.0/rtweet/R/http.R | 17 rtweet-2.0.0/rtweet/R/ids.R | 13 rtweet-2.0.0/rtweet/R/lat_lng.R | 13 rtweet-2.0.0/rtweet/R/links.R | 9 rtweet-2.0.0/rtweet/R/list_followers.R | 4 rtweet-2.0.0/rtweet/R/list_get.R | 5 rtweet-2.0.0/rtweet/R/list_members.R | 7 rtweet-2.0.0/rtweet/R/list_membership.R | 5 rtweet-2.0.0/rtweet/R/list_tweets.R | 6 rtweet-2.0.0/rtweet/R/lists_members.R | 13 rtweet-2.0.0/rtweet/R/lists_memberships.R | 24 rtweet-2.0.0/rtweet/R/lists_parsing.R | 1 rtweet-2.0.0/rtweet/R/lists_statuses.R | 5 rtweet-2.0.0/rtweet/R/lists_subscribers.R | 6 rtweet-2.0.0/rtweet/R/lists_subscriptions.R | 12 rtweet-2.0.0/rtweet/R/lists_users.R | 8 rtweet-2.0.0/rtweet/R/mentions.R | 11 rtweet-2.0.0/rtweet/R/next_cursor.R | 23 rtweet-2.0.0/rtweet/R/post-block.R | 8 rtweet-2.0.0/rtweet/R/post-favorite.R | 7 rtweet-2.0.0/rtweet/R/post-list.R | 42 - rtweet-2.0.0/rtweet/R/post-tweet.R | 39 - rtweet-2.0.0/rtweet/R/post-user.R | 7 rtweet-2.0.0/rtweet/R/post_destroy.R | 8 rtweet-2.0.0/rtweet/R/premium.R | 16 rtweet-2.0.0/rtweet/R/rate_limit.R | 37 - rtweet-2.0.0/rtweet/R/rt_stream.R | 35 rtweet-2.0.0/rtweet/R/save_as_csv.R | 11 rtweet-2.0.0/rtweet/R/scopes.R | 16 rtweet-2.0.0/rtweet/R/search_tweets.R | 45 - rtweet-2.0.0/rtweet/R/search_users.R | 12 rtweet-2.0.0/rtweet/R/statuses.R | 53 - rtweet-2.0.0/rtweet/R/stream.R | 22 rtweet-2.0.0/rtweet/R/timeline.R | 18 rtweet-2.0.0/rtweet/R/trends.R | 43 - rtweet-2.0.0/rtweet/R/ts_plot.R | 38 - rtweet-2.0.0/rtweet/R/tweet_counts.R | 6 rtweet-2.0.0/rtweet/R/tweet_liking_users.R | 5 rtweet-2.0.0/rtweet/R/tweet_retweeted_by.R | 5 rtweet-2.0.0/rtweet/R/tweet_search.R | 10 rtweet-2.0.0/rtweet/R/tweet_shot.R | 2 rtweet-2.0.0/rtweet/R/tweet_threading.R | 7 rtweet-2.0.0/rtweet/R/user_blocked.R | 9 rtweet-2.0.0/rtweet/R/user_bookmarks.R | 5 rtweet-2.0.0/rtweet/R/user_by_username.R | 5 rtweet-2.0.0/rtweet/R/user_followers.R | 5 rtweet-2.0.0/rtweet/R/user_following.R | 5 rtweet-2.0.0/rtweet/R/user_id.R | 31 rtweet-2.0.0/rtweet/R/user_liked_tweets.R | 5 rtweet-2.0.0/rtweet/R/user_lists.R | 5 rtweet-2.0.0/rtweet/R/user_lists_follows.R | 5 rtweet-2.0.0/rtweet/R/user_me.R | 6 rtweet-2.0.0/rtweet/R/user_mentions.R | 5 rtweet-2.0.0/rtweet/R/user_muted.R | 5 rtweet-2.0.0/rtweet/R/user_search.R | 5 rtweet-2.0.0/rtweet/R/user_timeline.R | 4 rtweet-2.0.0/rtweet/R/user_tweets.R | 5 rtweet-2.0.0/rtweet/R/users.R | 6 rtweet-2.0.0/rtweet/R/utils.R | 13 rtweet-2.0.0/rtweet/README.md | 3 rtweet-2.0.0/rtweet/inst/doc/auth.R | 47 - rtweet-2.0.0/rtweet/inst/doc/auth.Rmd | 145 +--- rtweet-2.0.0/rtweet/inst/doc/auth.html | 211 ++--- rtweet-2.0.0/rtweet/inst/doc/stream.Rmd | 12 rtweet-2.0.0/rtweet/inst/doc/stream.html | 9 rtweet-2.0.0/rtweet/man/as_screenname.Rd | 9 rtweet-2.0.0/rtweet/man/auth_clean.Rd |only rtweet-2.0.0/rtweet/man/bearer_token.Rd | 3 rtweet-2.0.0/rtweet/man/clean_tweets.Rd | 12 rtweet-2.0.0/rtweet/man/client_clean.Rd |only rtweet-2.0.0/rtweet/man/direct_messages.Rd | 10 rtweet-2.0.0/rtweet/man/direct_messages_received.Rd | 8 rtweet-2.0.0/rtweet/man/do_call_rbind.Rd | 26 rtweet-2.0.0/rtweet/man/emojis.Rd | 6 rtweet-2.0.0/rtweet/man/entity.Rd | 14 rtweet-2.0.0/rtweet/man/get_favorites.Rd | 15 rtweet-2.0.0/rtweet/man/get_followers.Rd | 12 rtweet-2.0.0/rtweet/man/get_friends.Rd | 10 rtweet-2.0.0/rtweet/man/get_mentions.Rd | 13 rtweet-2.0.0/rtweet/man/get_timeline.Rd | 21 rtweet-2.0.0/rtweet/man/get_trends.Rd | 36 - rtweet-2.0.0/rtweet/man/ids.Rd | 10 rtweet-2.0.0/rtweet/man/lat_lng.Rd | 13 rtweet-2.0.0/rtweet/man/links.Rd | 10 rtweet-2.0.0/rtweet/man/lists_members.Rd | 14 rtweet-2.0.0/rtweet/man/lists_memberships.Rd | 15 rtweet-2.0.0/rtweet/man/lists_statuses.Rd | 6 rtweet-2.0.0/rtweet/man/lists_subscribers.Rd | 7 rtweet-2.0.0/rtweet/man/lists_subscriptions.Rd | 7 rtweet-2.0.0/rtweet/man/lists_users.Rd | 9 rtweet-2.0.0/rtweet/man/lookup_coords.Rd | 6 rtweet-2.0.0/rtweet/man/lookup_tweets.Rd | 18 rtweet-2.0.0/rtweet/man/lookup_users.Rd | 6 rtweet-2.0.0/rtweet/man/max_id.Rd | 12 rtweet-2.0.0/rtweet/man/network_data.Rd | 28 rtweet-2.0.0/rtweet/man/next_cursor.Rd | 6 rtweet-2.0.0/rtweet/man/parse_stream.Rd | 3 rtweet-2.0.0/rtweet/man/post_destroy.Rd | 11 rtweet-2.0.0/rtweet/man/post_favorite.Rd | 10 rtweet-2.0.0/rtweet/man/post_follow.Rd | 10 rtweet-2.0.0/rtweet/man/post_list.Rd | 44 - rtweet-2.0.0/rtweet/man/post_tweet.Rd | 42 - rtweet-2.0.0/rtweet/man/rate_limit.Rd | 8 rtweet-2.0.0/rtweet/man/read_twitter_csv.Rd | 12 rtweet-2.0.0/rtweet/man/rtweet-deprecated.Rd |only rtweet-2.0.0/rtweet/man/rtweet_client.Rd | 2 rtweet-2.0.0/rtweet/man/rtweet_user.Rd | 5 rtweet-2.0.0/rtweet/man/search_fullarchive.Rd | 17 rtweet-2.0.0/rtweet/man/search_tweets.Rd | 44 - rtweet-2.0.0/rtweet/man/search_users.Rd | 14 rtweet-2.0.0/rtweet/man/stream_tweets.Rd | 19 rtweet-2.0.0/rtweet/man/stream_tweets2.Rd | 3 rtweet-2.0.0/rtweet/man/trends_available.Rd | 13 rtweet-2.0.0/rtweet/man/ts_data.Rd | 21 rtweet-2.0.0/rtweet/man/ts_plot.Rd | 17 rtweet-2.0.0/rtweet/man/tweet_delete.Rd | 8 rtweet-2.0.0/rtweet/man/tweet_post.Rd | 2 rtweet-2.0.0/rtweet/man/tweet_quoted.Rd | 3 rtweet-2.0.0/rtweet/man/tweet_shot.Rd | 4 rtweet-2.0.0/rtweet/man/tweet_threading.Rd | 8 rtweet-2.0.0/rtweet/man/user_block.Rd | 11 rtweet-2.0.0/rtweet/man/user_blocked.Rd | 4 rtweet-2.0.0/rtweet/man/users_data.Rd | 13 rtweet-2.0.0/rtweet/tests/testthat/_snaps/auth.md | 8 rtweet-2.0.0/rtweet/tests/testthat/test-auth.R | 10 rtweet-2.0.0/rtweet/tests/testthat/test-geo_objects.R | 28 rtweet-2.0.0/rtweet/tests/testthat/test-lat_lng.R | 13 rtweet-2.0.0/rtweet/tests/testthat/test-req_errors.R | 5 rtweet-2.0.0/rtweet/tests/testthat/test-stream.R | 13 rtweet-2.0.0/rtweet/vignettes/auth.Rmd | 145 +--- rtweet-2.0.0/rtweet/vignettes/stream.Rmd | 12 207 files changed, 1085 insertions(+), 2041 deletions(-)
Title: Read 'Blackrock-Microsystems' Files ('NEV', 'NSx')
Description: Loads 'Blackrock' <https://blackrockneurotech.com> neural signal
data files into the memory, provides utility tools to extract the data into
common formats such as plain-text 'tsv' and 'HDF5'.
Author: Zhengjia Wang [aut, cre]
Maintainer: Zhengjia Wang <dipterix.wang@gmail.com>
Diff between readNSx versions 0.0.3 dated 2024-02-17 and 0.0.4 dated 2024-02-24
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ src/readBCI.h | 13 +++++++++---- 4 files changed, 19 insertions(+), 10 deletions(-)
Title: Manipulation of Microsoft Word and PowerPoint Documents
Description: Access and manipulate 'Microsoft Word', 'RTF' and 'Microsoft PowerPoint' documents from R.
The package focuses on tabular and graphical reporting from R; it also provides two functions
that let users get document content into data objects. A set of functions
lets add and remove images, tables and paragraphs of text in new or existing documents.
The package does not require any installation of Microsoft products to be able to write Microsoft
files.
Author: David Gohel [aut, cre],
Stefan Moog [aut],
ArData [cph],
Frank Hangler [ctb] ,
Liz Sander [ctb] ,
Anton Victorson [ctb] ,
Jon Calder [ctb] ,
John Harrold [ctb] ,
John Muschelli [ctb] ,
Bill Denney [ctb] ,
Nikolai Beck [ctb] ,
Greg Leleu [ctb] ,
Hongy [...truncated...]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between officer versions 0.6.4 dated 2024-02-05 and 0.6.5 dated 2024-02-24
DESCRIPTION | 6 MD5 | 59 ++-- NAMESPACE | 9 NEWS.md | 11 R/docx_comments.R | 2 R/formatting_properties.R | 611 ++++++++++++++++++++++++++++---------------- R/ooxml.R | 527 +++++++++++++++++++++---------------- R/ooxml_run_objects.R | 428 ++++++++++++++++++------------ R/rtf.R | 87 ++++-- man/external_img.Rd | 17 - man/fp_border.Rd | 8 man/fp_cell.Rd | 2 man/fp_par.Rd | 9 man/fp_tab.Rd |only man/fp_tabs.Rd |only man/fp_text.Rd | 6 man/ftext.Rd | 1 man/hyperlink_ftext.Rd | 4 man/prop_section.Rd | 7 man/run_autonum.Rd | 7 man/run_bookmark.Rd | 1 man/run_columnbreak.Rd | 1 man/run_comment.Rd | 21 - man/run_footnote.Rd | 3 man/run_footnoteref.Rd | 1 man/run_linebreak.Rd | 1 man/run_pagebreak.Rd | 1 man/run_reference.Rd | 3 man/run_tab.Rd |only man/run_word_field.Rd | 1 man/run_wordtext.Rd | 1 man/set_autonum_bookmark.Rd | 6 32 files changed, 1131 insertions(+), 710 deletions(-)
Title: Make 'ggplot2' Graphics Interactive
Description: Create interactive 'ggplot2' graphics using 'htmlwidgets'.
Author: David Gohel [aut, cre],
Panagiotis Skintzos [aut],
Mike Bostock [cph] ,
Speros Kokenes [cph] ,
Eric Shull [cph] ,
Lee Thomason [cph] ,
Vladimir Agafonkin [cph] ,
Eric Book [ctb]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between ggiraph versions 0.8.8 dated 2023-12-09 and 0.8.9 dated 2024-02-24
ggiraph-0.8.8/ggiraph/inst/tinytest/test-guide_colourbar_interactive.R |only ggiraph-0.8.8/ggiraph/inst/tinytest/test-guide_coloursteps_interactive.R |only ggiraph-0.8.8/ggiraph/inst/tinytest/test-guide_interactive.R |only ggiraph-0.8.9/ggiraph/DESCRIPTION | 12 ggiraph-0.8.9/ggiraph/MD5 | 93 +- ggiraph-0.8.9/ggiraph/NAMESPACE | 17 ggiraph-0.8.9/ggiraph/NEWS.md | 14 ggiraph-0.8.9/ggiraph/R/fonts.R | 18 ggiraph-0.8.9/ggiraph/R/geom_boxplot_interactive.R | 21 ggiraph-0.8.9/ggiraph/R/geom_label_interactive.R | 31 ggiraph-0.8.9/ggiraph/R/geom_path_interactive.R | 88 -- ggiraph-0.8.9/ggiraph/R/geom_pointrange_interactive.R | 12 ggiraph-0.8.9/ggiraph/R/geom_violin_interactive.R | 17 ggiraph-0.8.9/ggiraph/R/ggiraph.R | 8 ggiraph-0.8.9/ggiraph/R/girafe.R | 25 ggiraph-0.8.9/ggiraph/R/guide_bins_interactive.R | 55 + ggiraph-0.8.9/ggiraph/R/guide_colourbar_interactive.R | 79 +- ggiraph-0.8.9/ggiraph/R/guide_coloursteps_interactive.R | 69 + ggiraph-0.8.9/ggiraph/R/guide_interactive.R | 346 ++++++---- ggiraph-0.8.9/ggiraph/R/guide_legend_interactive.R | 61 + ggiraph-0.8.9/ggiraph/R/ipar.R | 91 +- ggiraph-0.8.9/ggiraph/R/labeller_interactive.R | 1 ggiraph-0.8.9/ggiraph/R/layer_interactive.R | 48 - ggiraph-0.8.9/ggiraph/R/scale_interactive.R | 41 - ggiraph-0.8.9/ggiraph/R/utils.R | 6 ggiraph-0.8.9/ggiraph/inst/doc/overview.html | 14 ggiraph-0.8.9/ggiraph/inst/tinytest/setup.R | 4 ggiraph-0.8.9/ggiraph/inst/tinytest/test-ggiraph.R | 4 ggiraph-0.8.9/ggiraph/inst/tinytest/test-guide_bins_interactive.R | 217 +++++- ggiraph-0.8.9/ggiraph/inst/tinytest/test-guide_legend_interactive.R | 225 +++++- ggiraph-0.8.9/ggiraph/inst/tinytest/test-scale_interactive.R | 10 ggiraph-0.8.9/ggiraph/man/ggiraph-ggproto.Rd | 8 ggiraph-0.8.9/ggiraph/man/ggiraph.Rd | 4 ggiraph-0.8.9/ggiraph/man/guide_bins_interactive.Rd | 104 ++- ggiraph-0.8.9/ggiraph/man/guide_colourbar_interactive.Rd | 64 + ggiraph-0.8.9/ggiraph/man/guide_coloursteps_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/guide_legend_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/interactive_parameters.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_alpha_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_colour_brewer_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_colour_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_colour_steps_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_gradient_interactive.Rd | 64 + ggiraph-0.8.9/ggiraph/man/scale_linetype_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_manual_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_shape_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_size_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/man/scale_viridis_interactive.Rd | 21 ggiraph-0.8.9/ggiraph/src/dsvg_dev.cpp | 2 49 files changed, 1321 insertions(+), 804 deletions(-)
Title: Create Tidy Data Frames of Marginal Effects for 'ggplot' from
Model Outputs
Description: Compute marginal effects and adjusted predictions from statistical
models and returns the result as tidy data frames. These data frames are
ready to use with the 'ggplot2'-package. Effects and predictions can be
calculated for many different models. Interaction terms, splines and
polynomial terms are also supported. The main functions are ggpredict(),
ggemmeans() and ggeffect(). There is a generic plot()-method to plot the
results using 'ggplot2'.
Author: Daniel Luedecke [aut, cre] ,
Frederik Aust [ctb] ,
Sam Crawley [ctb] ,
Mattan S. Ben-Shachar [ctb] ,
Sean C. Anderson [ctb]
Maintainer: Daniel Luedecke <d.luedecke@uke.de>
Diff between ggeffects versions 1.4.0 dated 2024-02-05 and 1.5.0 dated 2024-02-24
ggeffects-1.4.0/ggeffects/R/hypothesis_test.R |only ggeffects-1.4.0/ggeffects/man/hypothesis_test.Rd |only ggeffects-1.4.0/ggeffects/tests/testthat/_snaps/print_hypothesis_test-ordinal.md |only ggeffects-1.4.0/ggeffects/tests/testthat/_snaps/print_hypothesis_test.md |only ggeffects-1.4.0/ggeffects/tests/testthat/test-hypothesis_test.R |only ggeffects-1.4.0/ggeffects/tests/testthat/test-print_hypothesis_test-ordinal.R |only ggeffects-1.4.0/ggeffects/tests/testthat/test-print_hypothesis_test.R |only ggeffects-1.5.0/ggeffects/DESCRIPTION | 10 ggeffects-1.5.0/ggeffects/LICENSE | 4 ggeffects-1.5.0/ggeffects/MD5 | 157 +- ggeffects-1.5.0/ggeffects/NAMESPACE | 5 ggeffects-1.5.0/ggeffects/NEWS.md | 42 ggeffects-1.5.0/ggeffects/R/collapse_re_data.R | 4 ggeffects-1.5.0/ggeffects/R/data_frame_methods.R | 4 ggeffects-1.5.0/ggeffects/R/format.R | 27 ggeffects-1.5.0/ggeffects/R/get_predictions_glmmTMB.R | 2 ggeffects-1.5.0/ggeffects/R/get_predictions_stan.R | 8 ggeffects-1.5.0/ggeffects/R/get_predictions_zelig.R | 2 ggeffects-1.5.0/ggeffects/R/getter.R | 38 ggeffects-1.5.0/ggeffects/R/ggaverage.R | 61 - ggeffects-1.5.0/ggeffects/R/ggeffect.R | 68 - ggeffects-1.5.0/ggeffects/R/ggpredict.R | 552 +-------- ggeffects-1.5.0/ggeffects/R/johnson_neyman.R | 48 ggeffects-1.5.0/ggeffects/R/moderator_pattern.R | 67 - ggeffects-1.5.0/ggeffects/R/new_data.R | 9 ggeffects-1.5.0/ggeffects/R/plot.R | 243 +--- ggeffects-1.5.0/ggeffects/R/pool_comparisons.R | 10 ggeffects-1.5.0/ggeffects/R/pool_predictions.R | 7 ggeffects-1.5.0/ggeffects/R/post_processing_labels.R | 2 ggeffects-1.5.0/ggeffects/R/predict_response.R |only ggeffects-1.5.0/ggeffects/R/predict_zero_inflation.R | 3 ggeffects-1.5.0/ggeffects/R/predictions.R | 98 + ggeffects-1.5.0/ggeffects/R/print.R | 36 ggeffects-1.5.0/ggeffects/R/residualize_over_grid.R | 20 ggeffects-1.5.0/ggeffects/R/sanitize_type_arg.R | 136 +- ggeffects-1.5.0/ggeffects/R/standard_error_predictions.R | 2 ggeffects-1.5.0/ggeffects/R/test_predictions.R |only ggeffects-1.5.0/ggeffects/R/utils_get_data_grid.R | 16 ggeffects-1.5.0/ggeffects/R/utils_ggpredict.R | 76 + ggeffects-1.5.0/ggeffects/R/utils_handle_labels.R | 6 ggeffects-1.5.0/ggeffects/R/utils_set_attr.R | 2 ggeffects-1.5.0/ggeffects/R/utils_typical_value.R | 21 ggeffects-1.5.0/ggeffects/R/vcov.R | 187 +-- ggeffects-1.5.0/ggeffects/README.md | 372 +++--- ggeffects-1.5.0/ggeffects/inst/doc/content.Rmd | 3 ggeffects-1.5.0/ggeffects/inst/doc/content.html | 8 ggeffects-1.5.0/ggeffects/man/collapse_by_group.Rd | 6 ggeffects-1.5.0/ggeffects/man/figures/unnamed-chunk-3-1.png |binary ggeffects-1.5.0/ggeffects/man/figures/unnamed-chunk-4-1.png |binary ggeffects-1.5.0/ggeffects/man/figures/unnamed-chunk-5-1.png |binary ggeffects-1.5.0/ggeffects/man/figures/unnamed-chunk-6-1.png |binary ggeffects-1.5.0/ggeffects/man/figures/unnamed-chunk-7-1.png |binary ggeffects-1.5.0/ggeffects/man/get_title.Rd | 12 ggeffects-1.5.0/ggeffects/man/ggpredict.Rd | 495 +------- ggeffects-1.5.0/ggeffects/man/install_latest.Rd | 80 - ggeffects-1.5.0/ggeffects/man/johnson_neyman.Rd | 24 ggeffects-1.5.0/ggeffects/man/new_data.Rd | 12 ggeffects-1.5.0/ggeffects/man/plot.Rd | 10 ggeffects-1.5.0/ggeffects/man/pool_comparisons.Rd | 8 ggeffects-1.5.0/ggeffects/man/pool_predictions.Rd | 5 ggeffects-1.5.0/ggeffects/man/predict_response.Rd |only ggeffects-1.5.0/ggeffects/man/print.Rd | 34 ggeffects-1.5.0/ggeffects/man/residualize_over_grid.Rd | 4 ggeffects-1.5.0/ggeffects/man/test_predictions.Rd |only ggeffects-1.5.0/ggeffects/man/vcov.Rd | 24 ggeffects-1.5.0/ggeffects/tests/testthat/_snaps/avg_predictions.md | 30 ggeffects-1.5.0/ggeffects/tests/testthat/_snaps/glmmTMB.md |only ggeffects-1.5.0/ggeffects/tests/testthat/_snaps/polr.md |only ggeffects-1.5.0/ggeffects/tests/testthat/_snaps/print.md | 597 +++++----- ggeffects-1.5.0/ggeffects/tests/testthat/_snaps/print_test_predictions-ordinal.md |only ggeffects-1.5.0/ggeffects/tests/testthat/_snaps/print_test_predictions.md |only ggeffects-1.5.0/ggeffects/tests/testthat/test-avg_predictions.R | 17 ggeffects-1.5.0/ggeffects/tests/testthat/test-backtransform_response.R | 26 ggeffects-1.5.0/ggeffects/tests/testthat/test-clm.R | 10 ggeffects-1.5.0/ggeffects/tests/testthat/test-fixest.R | 15 ggeffects-1.5.0/ggeffects/tests/testthat/test-glm.R | 17 ggeffects-1.5.0/ggeffects/tests/testthat/test-glmmTMB.R | 44 ggeffects-1.5.0/ggeffects/tests/testthat/test-linear-models.R | 102 + ggeffects-1.5.0/ggeffects/tests/testthat/test-ordinal.R | 18 ggeffects-1.5.0/ggeffects/tests/testthat/test-parsnip.R | 54 ggeffects-1.5.0/ggeffects/tests/testthat/test-polr.R | 39 ggeffects-1.5.0/ggeffects/tests/testthat/test-prediction_interval.R |only ggeffects-1.5.0/ggeffects/tests/testthat/test-print.R | 127 +- ggeffects-1.5.0/ggeffects/tests/testthat/test-print_test_predictions-ordinal.R |only ggeffects-1.5.0/ggeffects/tests/testthat/test-print_test_predictions.R |only ggeffects-1.5.0/ggeffects/tests/testthat/test-test_predictions.R |only ggeffects-1.5.0/ggeffects/tests/testthat/test-vcov.R | 63 + ggeffects-1.5.0/ggeffects/tests/testthat/test-zeroinfl.R | 26 ggeffects-1.5.0/ggeffects/vignettes/content.Rmd | 3 89 files changed, 2195 insertions(+), 2063 deletions(-)
Title: Retrieving and Analyzing Air Quality and Weather Data from ARPA
Lombardia
Description: Contains functions for retrieving, managing and analysing air quality and weather data from Regione Lombardia open database (<https://www.dati.lombardia.it/>).
Data are collected by ARPA Lombardia (Lombardia Environmental Protection Agency), Italy, through its ground monitoring network.
See the webpage <https://www.arpalombardia.it/> for further information on ARPA Lombardia's activities and history.
Data quality (e.g. missing values, exported values, graphical mapping) has been checked involving members of the ARPA Lombardia's office for air quality control.
The package makes available observations since 1989 (for weather) and 1968 (for air quality) and are updated with daily frequency by the regional agency.
Author: Paolo Maranzano [aut, cre, cph]
,
Andrea Algieri [aut, cph]
Maintainer: Paolo Maranzano <pmaranzano.ricercastatistica@gmail.com>
Diff between ARPALData versions 1.5.0 dated 2023-09-26 and 1.5.1 dated 2024-02-24
DESCRIPTION | 8 MD5 | 14 - R/get_ARPA_Lombardia_AQ_data.R | 35 ++- R/get_ARPA_Lombardia_AQ_municipal_data.R | 290 +++++++++++++++---------------- R/get_ARPA_Lombardia_W_data.R | 233 +++++++++++++----------- R/url_dataset_year.R | 13 - man/ARPALData.Rd | 1 man/get_ARPA_Lombardia_AQ_data.Rd | 2 8 files changed, 317 insertions(+), 279 deletions(-)
Title: Synthetic Population Generator
Description: Generates high-entropy integer synthetic populations from marginal and (optionally) seed data using quasirandom sampling,
in arbitrary dimensionality (Smith, Lovelace and Birkin (2017) <doi:10.18564/jasss.3550>).
The package also provides an implementation of the Iterative Proportional Fitting (IPF) algorithm (Zaloznik (2011) <doi:10.13140/2.1.2480.9923>).
Author: Andrew Smith [aut, cre],
Steven Johnson [ctb] ,
Massachusetts Institute of Technology [cph] ,
John Burkhardt [ctb, cph] ,
G Bhattacharjee [ctb]
Maintainer: Andrew Smith <andrew@friarswood.net>
Diff between humanleague versions 2.2.0 dated 2023-04-17 and 2.3.1 dated 2024-02-24
humanleague-2.2.0/humanleague/src/NDArrayUtils.cpp |only humanleague-2.3.1/humanleague/DESCRIPTION | 6 humanleague-2.3.1/humanleague/MD5 | 27 +-- humanleague-2.3.1/humanleague/R/humanleague.R | 2 humanleague-2.3.1/humanleague/src/IPF.h | 4 humanleague-2.3.1/humanleague/src/Integerise.cpp | 4 humanleague-2.3.1/humanleague/src/Log.h | 9 - humanleague-2.3.1/humanleague/src/Microsynthesis.h | 22 +- humanleague-2.3.1/humanleague/src/NDArray.h | 1 humanleague-2.3.1/humanleague/src/NDArrayUtils.h | 4 humanleague-2.3.1/humanleague/src/QISI.cpp | 12 - humanleague-2.3.1/humanleague/src/Sobol.cpp | 24 +-- humanleague-2.3.1/humanleague/src/Sobol.h | 2 humanleague-2.3.1/humanleague/src/module.cpp | 128 +++++----------- humanleague-2.3.1/humanleague/tests/testthat/test-all.R | 10 - 15 files changed, 97 insertions(+), 158 deletions(-)
Title: Tools for Reading, Writing, Viewing and Manipulating CIFTI Files
Description: CIFTI files contain brain imaging data in "grayordinates," which
represent the gray matter as cortical surface vertices (left and right) and
subcortical voxels (cerebellum, basal ganglia, and other deep gray matter).
'ciftiTools' provides a unified environment for reading, writing,
visualizing and manipulating CIFTI-format data. It supports the "dscalar,"
"dlabel," and "dtseries" intents. Grayordinate data is read in as a "xifti"
object, which is structured for convenient access to the data and metadata,
and includes support for surface geometry files to enable
spatially-dependent functionality such as static or interactive
visualizations and smoothing.
Author: Amanda Mejia [aut, cre],
Damon Pham [aut] ,
John Muschelli [ctb]
Maintainer: Amanda Mejia <mandy.mejia@gmail.com>
Diff between ciftiTools versions 0.13.4 dated 2024-01-21 and 0.14.0 dated 2024-02-24
DESCRIPTION | 8 +++--- MD5 | 54 +++++++++++++++++++++++----------------------- NEWS.md | 4 +++ R/info_cifti.R | 3 +- R/rotate_surf.R | 2 - R/utils_color.R | 2 - R/view_xifti.R | 2 - R/view_xifti_surface.R | 4 +-- R/view_xifti_volume.R | 2 - man/add_surf.Rd | 2 - man/apply_parc.Rd | 2 - man/apply_xifti.Rd | 2 - man/combine_xifti.Rd | 2 - man/convert_xifti.Rd | 2 - man/merge_xifti.Rd | 2 - man/move_to_mwall.Rd | 2 - man/newdata_xifti.Rd | 2 - man/remap_cifti.Rd | 2 - man/remove_xifti.Rd | 2 - man/scale_xifti.Rd | 2 - man/select_xifti.Rd | 2 - man/set_names_xifti.Rd | 2 - man/smooth_cifti.Rd | 2 - man/transform_xifti.Rd | 2 - man/view_comp.Rd | 4 +-- man/view_surf.Rd | 4 +-- man/view_xifti_surface.Rd | 4 +-- man/view_xifti_volume.Rd | 4 +-- 28 files changed, 66 insertions(+), 61 deletions(-)
Title: Custom Visualizations & Functions for Streamlined Analyses of
Single Cell Sequencing
Description: Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675.
Author: Samuel Marsh [aut, cre] ,
Ming Tang [ctb],
Velina Kozareva [ctb],
Lucas Graybuck [ctb]
Maintainer: Samuel Marsh <samuel.marsh@childrens.harvard.edu>
Diff between scCustomize versions 2.1.0 dated 2024-02-23 and 2.1.1 dated 2024-02-24
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS.md | 16 ++++++++++++++++ R/Object_Conversion.R | 13 ++++++++++--- 4 files changed, 33 insertions(+), 10 deletions(-)
Title: Spatial Transfer of Statistics among Spanish Census Sections
Description: Transfers/imputes statistics among Spanish spatial polygons (census sections or postal code areas) from different moments in time (2001-2023) without need of spatial files, just linking statistics to the ID codes of the spatial units.
The data available in the census sections of a partition/division (cartography) into force in a moment of time is transferred to the census sections of another partition/division employing the geometric approach (also known as areal weighting or polygon overlay).
References:
Goerlich (2022) <doi:10.12842/WPIVIE_0322>.
Pavía and Cantarino (2017a, b) <doi:10.1111/gean.12112>, <doi:10.1016/j.apgeog.2017.06.021>.
Acknowledgements:
The authors wish to thank Consellería de Educación, Universidades y Empleo, Generalitat Valenciana (grant AICO/2021/257) and Ministerio de Economía e Innovación (grant PID2021-128228NB-I00) for supporting this research.
Author: Virgilio Perez [aut] ,
Jose M. Pavia [aut, cre]
Maintainer: Jose M. Pavia <jose.m.pavia@uv.es>
Diff between sc2sc versions 0.0.1-9 dated 2024-01-22 and 0.0.1-12 dated 2024-02-24
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS.md | 7 ++++++- R/auxiliary_functions.R | 2 +- R/sysdata.rda |binary build/partial.rdb |binary 6 files changed, 16 insertions(+), 11 deletions(-)
Title: Estimate Hierarchical Feature Regression Models
Description: Provides functions for the estimation, plotting, predicting and cross-validation of hierarchical feature regression models as described in Pfitzinger (2024). Cluster Regularization via a Hierarchical Feature Regression. Journal of Econometrics and Statistics (in press). <doi:10.1016/j.ecosta.2024.01.003>.
Author: Johann Pfitzinger [aut, cre]
Maintainer: Johann Pfitzinger <johann.pfitzinger@gmail.com>
Diff between hfr versions 0.6.2 dated 2023-12-21 and 0.7.0 dated 2024-02-24
DESCRIPTION | 12 ++++--- MD5 | 27 ++++++++-------- NAMESPACE | 1 NEWS.md | 6 +++ R/check_args.R |only R/cv.hfr.R | 89 +++++++++++++++-------------------------------------- R/hfr.R | 83 +++++++++++++++---------------------------------- R/internal.R | 4 +- R/plot.cv.hfr.R | 6 ++- R/plot.hfr.R | 8 +++- R/predict.cv.hfr.R | 3 + R/predict.hfr.R | 4 +- R/se.avg.R | 3 + man/cv.hfr.Rd | 8 +--- man/hfr.Rd | 16 ++++++--- 15 files changed, 113 insertions(+), 157 deletions(-)
Title: Historical and Ahistorical Population Projection Matrix Analysis
Description: Complete analytical environment for the construction and analysis
of matrix population models and integral projection models.
Includes the ability to construct historical matrices, which are
2d matrices comprising 3 consecutive times of demographic
information. Estimates both raw and function-based forms of
historical and standard ahistorical matrices. It also estimates
function-based age-by-stage matrices and raw and function-based
Leslie matrices.
Author: Richard P. Shefferson [aut, cre]
,
Johan Ehrlen [aut]
Maintainer: Richard P. Shefferson <cdorm@g.ecc.u-tokyo.ac.jp>
Diff between lefko3 versions 6.2.0 dated 2024-01-27 and 6.2.1 dated 2024-02-24
DESCRIPTION | 10 MD5 | 104 +- NAMESPACE | 6 NEWS.md | 43 R/RcppExports.R | 191 +++- R/data.R | 42 R/lefko3-package.R | 7 R/matrixcreation.R | 299 +++++- R/modelselection.R | 1484 +++++++++++++++++++--------------- R/popchar.R | 205 ++++ R/popdyn.R | 66 - inst/doc/Chapter5.Rmd | 50 - inst/doc/Chapter5.html | 198 ++-- inst/doc/Chapter6.Rmd | 60 - inst/doc/Chapter6.html | 302 +++--- inst/doc/Chapter8.Rmd | 2 inst/doc/Chapter8.html | 5 inst/include/basic_funcs/main_utils.h | 569 ++++++------- inst/include/basic_funcs/mat_stuff.h | 9 man/add_stage.Rd | 20 man/aflefko2.Rd | 61 + man/density_vr.Rd | 67 + man/f_projection3.Rd | 82 + man/flefko2.Rd | 108 +- man/flefko3.Rd | 111 ++ man/fleslie.Rd | 19 man/lefko3-package.Rd | 8 man/matrix_interp.Rd | 26 man/modelsearch.Rd | 31 man/mpm_create.Rd | 63 + man/pyrola.Rd | 40 src/Mats2.cpp | 20 src/MatsNProj.cpp | 149 ++- src/PopChar.cpp | 28 src/PopDyn2.cpp | 447 ++++++---- src/RcppExports.cpp | 4 vignettes/Ch5.14-1.png |binary vignettes/Ch5.15-1.png |binary vignettes/Ch5.18-1.png |binary vignettes/Ch5.19-1.png |binary vignettes/Ch5.20-1.png |binary vignettes/Ch5.24-1.png |binary vignettes/Ch5.25-1.png |binary vignettes/Ch5.28-1.png |binary vignettes/Ch6.16-1.png |binary vignettes/Ch6.18-1.png |binary vignettes/Ch6.19-1.png |binary vignettes/Chapter5.Rmd | 50 - vignettes/Chapter5.Rmd.orig | 6 vignettes/Chapter6.Rmd | 60 - vignettes/Chapter6.Rmd.orig | 9 vignettes/Chapter8.Rmd | 2 vignettes/Chapter8.Rmd.orig | 2 53 files changed, 3239 insertions(+), 1826 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-08-23 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-18 0.5-7
2019-05-11 0.5-6
2018-09-25 0.5-5
2014-05-28 0.5-1
2013-12-26 0.4-1
2013-10-02 0.3-3
2013-09-08 0.3-2
2013-01-21 0.2-4
2012-06-24 0.2-2
2012-03-30 0.1-2
2011-05-09 0.1-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-30 1.1
2020-06-25 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-04-27 1.4.0
2021-12-01 1.3.8
2021-11-18 1.3.7
2021-05-19 1.3.4
2021-02-15 1.3.2
2021-01-07 1.3.0
2020-10-06 1.2.0
2020-07-08 1.1.0
2020-06-13 1.0.0
2020-04-07 0.9.6
2019-11-20 0.9.5
2019-11-07 0.9.4
2019-10-23 0.9.2
2019-09-26 0.9.0
2019-01-14 0.8.4
2018-12-03 0.8.0
2017-05-06 0.7.0
2016-11-17 0.6.6
2016-10-22 0.6.5
2016-10-07 0.6.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-29 3.1.0
2020-05-27 3.0.2