Title: Add Tests to Examples
Description: Add tests in-line in examples. Provides standalone functions for
facilitating easier test writing in Rd files. However, a more familiar
interface is provided using 'roxygen2' tags. Tools are also provided for
facilitating package configuration and use with 'testthat'.
Author: Doug Kelkhoff [aut, cre]
Maintainer: Doug Kelkhoff <doug.kelkhoff@gmail.com>
Diff between testex versions 0.1.0 dated 2024-04-04 and 0.2.0 dated 2024-04-14
DESCRIPTION | 7 - MD5 | 57 ++++++------ NAMESPACE | 2 NEWS.md | 45 +++++++++ R/opts.R | 88 +++++++++++++++---- R/roxygen2.R | 31 +++--- R/testex.R | 85 ++++++++++++++---- R/testthat.R | 127 ++++++++++++---------------- R/utils.R | 43 +++++++-- R/utils_srcref.R | 25 +++-- inst/pkg.example/DESCRIPTION | 3 inst/pkg.example/R/fn.R | 8 - inst/pkg.example/man/fn.Rd | 6 - inst/pkg.example/man/fn_roxygen.Rd | 18 ++- inst/pkg.example/man/fn_roxygen_multiple.Rd | 16 ++- inst/pkg.example/man/fn_roxygen_testthat.Rd | 26 +---- man/fallback_expect_no_error.Rd |only man/package-file-helpers.Rd | 2 man/test_examples_as_testthat.Rd | 10 +- man/testex-options.Rd | 6 - man/testex-testthat.Rd | 97 +-------------------- man/testex.Rd | 29 +++--- man/uses_roxygen2.Rd |only man/with_srcref.Rd |only tests/testthat/setup.R |only tests/testthat/test-options.R | 28 ++++-- tests/testthat/test-pkgexample.R |only tests/testthat/test-roxygen2-testthat.R | 2 tests/testthat/test-srcref-key.R | 9 + tests/testthat/test-testex.R | 7 + tests/testthat/test-testthat.R | 45 +-------- tests/testthat/test-use.R | 8 - 32 files changed, 469 insertions(+), 361 deletions(-)
Title: Creating and Annotating a Composite Plot in 'ggplot2'
Description: Provides functions for creating and annotating a composite plot in 'ggplot2'. Offers background themes and shortcut plotting functions that produce figures that are appropriate for the format of scientific journals. Some methods are described in Min and Zhou (2021) <doi:10.3389/fgene.2021.802894>.
Author: Seung Hyun Min [aut, cre]
Maintainer: Seung Hyun (Sam) Min <seung.min@mail.mcgill.ca>
Diff between smplot2 versions 0.1.0 dated 2024-04-12 and 0.2.0 dated 2024-04-14
DESCRIPTION | 6 +++--- MD5 | 9 +++++---- NEWS.md | 12 +++++++----- R/sm_put_together.R | 9 +++++---- README.md | 15 +++++++++++++-- man/figures |only 6 files changed, 33 insertions(+), 18 deletions(-)
Title: R Bindings for 'ZeroMQ'
Description: Interface to the 'ZeroMQ' lightweight messaging kernel (see <https://zeromq.org/> for more information).
Author: Whit Armstrong [aut],
Michael Schubert [ctb],
Jeroen Ooms [aut, cre]
Maintainer: Jeroen Ooms <jeroen@berkeley.edu>
Diff between rzmq versions 0.9.12 dated 2023-12-04 and 0.9.13 dated 2024-04-14
DESCRIPTION | 6 +- MD5 | 8 +- NEWS | 3 + src/Makevars.in | 2 src/interface.cpp | 150 +++++++++++++++++++++++++++--------------------------- 5 files changed, 86 insertions(+), 83 deletions(-)
Title: Horn's Test of Principal Components/Factors
Description: An implementation of Horn's technique for numerically and graphically evaluating the components or factors retained in a principle components analysis (PCA) or common factor analysis (FA). Horn's method contrasts eigenvalues produced through a PCA or FA on a number of random data sets of uncorrelated variables with the same number of variables and observations as the experimental or observational data set to produce eigenvalues for components or factors that are adjusted for the sample error-induced inflation. Components with adjusted eigenvalues greater than one are retained. paran may also be used to conduct parallel analysis following Glorfeld's (1995) suggestions to reduce the likelihood of over-retention.
Author: Alexis Dinno
Maintainer: Alexis Dinno <alexis.dinno@pdx.edu>
Diff between paran versions 1.5.2 dated 2018-10-14 and 1.5.3 dated 2024-04-14
DESCRIPTION | 13 +++++++------ MD5 | 5 +++-- build |only man/paran.Rd | 10 +++++----- 4 files changed, 15 insertions(+), 13 deletions(-)
Title: Optimized Automated Gaussian Mixture Assessment
Description: Necessary functions for optimized automated evaluation of the number and parameters of Gaussian mixtures in one-dimensional data. Various methods are available for parameter estimation and for determining the number of modes in the mixture. A detailed description of the methods ca ben found in Lotsch, J., Malkusch, S. and A. Ultsch. (2022) <doi:10.1016/j.imu.2022.101113>.
Author: Jorn Lotsch [aut,cre] ,
Sebastian Malkusch [aut] ,
Martin Maechler [ctb],
Peter Rousseeuw [ctb],
Anja Struyf [ctb],
Mia Hubert [ctb],
Kurt Hornik [ctb]
Maintainer: Jorn Lotsch <j.lotsch@em.uni-frankfurt.de>
Diff between opGMMassessment versions 0.3.6 dated 2024-03-28 and 0.4 dated 2024-04-14
DESCRIPTION | 6 - MD5 | 14 +-- R/CreateGMM.R | 51 +++++++----- R/DetermineBestGMM.R | 170 ++++++++++++++++++------------------------ R/GMMplotGG.R | 176 ++++++++++++++++++++++++------------------- R/PerformGMMfit.R | 206 ++++++++++++++++++++++++++------------------------- R/clusGapP.R | 126 +++++++++++++++++-------------- R/opGMMassessment.R | 192 ++++++++++++++++++++++------------------------- 8 files changed, 483 insertions(+), 458 deletions(-)
More information about opGMMassessment at CRAN
Permanent link
Title: Neutrosophic Distributions
Description: Computes the pdf, cdf, quantile function and generating random numbers for neutrosophic distributions. This family have been developed by different authors in the recent years. See Patro and Smarandache (2016) <doi:10.5281/zenodo.571153> and Rao et al (2023) <doi:10.5281/zenodo.7832786>.
Author: Danial Mazarei [aut, cre] ,
Mina Norouzirad [aut] ,
Amin Roshani [aut] ,
Gadde Srinivasa Rao [ctb] ,
Foad Esmaeili [ctb] ,
FCT, I.P. [fnd] )
Maintainer: Danial Mazarei <danial.mazarei@gmail.com>
Diff between ntsDists versions 2.0.0 dated 2023-12-01 and 2.1.0 dated 2024-04-14
ntsDists-2.0.0/ntsDists/R/nsdunif.R |only ntsDists-2.0.0/ntsDists/R/nsgexp.R |only ntsDists-2.0.0/ntsDists/R/nsgpd.R |only ntsDists-2.0.0/ntsDists/R/nsgrayleigh.R |only ntsDists-2.0.0/ntsDists/R/nsnbinom.R |only ntsDists-2.1.0/ntsDists/DESCRIPTION | 15 ntsDists-2.1.0/ntsDists/MD5 | 80 +- ntsDists-2.1.0/ntsDists/NAMESPACE | 188 ++--- ntsDists-2.1.0/ntsDists/NEWS.md | 8 ntsDists-2.1.0/ntsDists/R/balls.R | 48 - ntsDists-2.1.0/ntsDists/R/nsDiscUnif.R |only ntsDists-2.1.0/ntsDists/R/nsGenExp.R |only ntsDists-2.1.0/ntsDists/R/nsGenPareto.R |only ntsDists-2.1.0/ntsDists/R/nsGenRayleigh.R |only ntsDists-2.1.0/ntsDists/R/nsKumaraswamy.R |only ntsDists-2.1.0/ntsDists/R/nsLaplace.R |only ntsDists-2.1.0/ntsDists/R/nsNegBinom.R |only ntsDists-2.1.0/ntsDists/R/nsbeta.R | 313 ++++----- ntsDists-2.1.0/ntsDists/R/nsbinom.R | 327 +++++----- ntsDists-2.1.0/ntsDists/R/nsexp.R | 306 ++++----- ntsDists-2.1.0/ntsDists/R/nsgamma.R | 300 ++++----- ntsDists-2.1.0/ntsDists/R/nsgeom.R | 298 ++++----- ntsDists-2.1.0/ntsDists/R/nsnorm.R | 309 ++++----- ntsDists-2.1.0/ntsDists/R/nspois.R | 314 ++++----- ntsDists-2.1.0/ntsDists/R/nsrayleigh.R | 290 ++++---- ntsDists-2.1.0/ntsDists/R/nsunif.R | 282 ++++---- ntsDists-2.1.0/ntsDists/R/nsweibull.R | 293 ++++---- ntsDists-2.1.0/ntsDists/R/remission.R | 44 - ntsDists-2.1.0/ntsDists/README.md | 114 +-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Beta.Rd | 161 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Binomial.Rd | 157 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Discrete-Uniform.Rd | 141 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Exponential.Rd | 160 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Gamma.Rd | 147 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Generalized-Exponential.Rd | 153 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Generalized-Pareto.Rd | 145 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Generalized-Rayleigh.Rd | 147 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Geometric.Rd | 141 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Kumaraswamy.Rd |only ntsDists-2.1.0/ntsDists/man/Neutrosophic-Laplace.Rd |only ntsDists-2.1.0/ntsDists/man/Neutrosophic-Negative-Binomial.Rd | 129 ++- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Normal.Rd | 144 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Poisson.Rd | 147 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Rayleigh.Rd | 139 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Uniform.Rd | 142 ++-- ntsDists-2.1.0/ntsDists/man/Neutrosophic-Weibull.Rd | 147 ++-- ntsDists-2.1.0/ntsDists/man/balls.Rd | 48 - ntsDists-2.1.0/ntsDists/man/remission.Rd | 46 - 48 files changed, 2956 insertions(+), 2867 deletions(-)
Title: Selection of Statistically Similar Research Groups
Description: Select statistically similar research groups by backward selection using various robust algorithms, including a heuristic based on linear discriminant analysis, multiple heuristics based on the test statistic, and parallelized exhaustive search.
Author: Kyle Gorman [aut, cre],
Geza Kiss [aut]
Maintainer: Kyle Gorman <kylebgorman@gmail.com>
Diff between ldamatch versions 1.0.2 dated 2021-05-23 and 1.0.3 dated 2024-04-14
ldamatch-1.0.2/ldamatch/man/ldamatch.Rd |only ldamatch-1.0.3/ldamatch/DESCRIPTION | 8 ldamatch-1.0.3/ldamatch/LICENSE | 4 ldamatch-1.0.3/ldamatch/MD5 | 56 ldamatch-1.0.3/ldamatch/NAMESPACE | 82 ldamatch-1.0.3/ldamatch/R/estimate_exhaustive.R | 388 +-- ldamatch-1.0.3/ldamatch/R/evaluation.R | 452 ++-- ldamatch-1.0.3/ldamatch/R/globals.R | 154 - ldamatch-1.0.3/ldamatch/R/halting_tests.R | 934 ++++---- ldamatch-1.0.3/ldamatch/R/helpers.R | 979 ++++---- ldamatch-1.0.3/ldamatch/R/ldamatch.R | 803 +++---- ldamatch-1.0.3/ldamatch/R/search_exhaustive.R | 586 ++--- ldamatch-1.0.3/ldamatch/R/search_heuristic2.R | 264 +- ldamatch-1.0.3/ldamatch/R/search_heuristic3.R | 262 +- ldamatch-1.0.3/ldamatch/R/search_heuristic4.R | 230 +- ldamatch-1.0.3/ldamatch/R/search_heuristic_with_lookahead.R | 540 ++-- ldamatch-1.0.3/ldamatch/R/search_random.R | 262 +- ldamatch-1.0.3/ldamatch/build/vignette.rds |binary ldamatch-1.0.3/ldamatch/inst/doc/ldamatch-demos.R | 154 - ldamatch-1.0.3/ldamatch/inst/doc/ldamatch-demos.Rmd | 262 +- ldamatch-1.0.3/ldamatch/inst/doc/ldamatch-demos.html | 1356 ++++++------ ldamatch-1.0.3/ldamatch/man/dot-choose_best_subjects.Rd | 42 ldamatch-1.0.3/ldamatch/man/dot-normalize_props.Rd | 2 ldamatch-1.0.3/ldamatch/man/ldamatch-package.Rd |only ldamatch-1.0.3/ldamatch/man/set_param.Rd | 18 ldamatch-1.0.3/ldamatch/tests/testthat.R | 8 ldamatch-1.0.3/ldamatch/tests/testthat/test-calc_metrics.R | 32 ldamatch-1.0.3/ldamatch/tests/testthat/test-calc_p_value.R | 30 ldamatch-1.0.3/ldamatch/tests/testthat/test-ldamatch.R | 372 +-- ldamatch-1.0.3/ldamatch/vignettes/ldamatch-demos.Rmd | 262 +- 30 files changed, 4314 insertions(+), 4228 deletions(-)
Title: Euclidean Distance-Optimized Data Transformation
Description: A data transformation method which takes into account the special property of scale non-invariance with a breakpoint at 1 of the Euclidean distance.
Author: Jorn Lotsch[aut,cre], Alfred Ultsch[aut]
Maintainer: Jorn Lotsch <j.lotsch@em.uni-frankfurt.de>
Diff between EDOtrans versions 0.2.2 dated 2022-12-18 and 0.2.5 dated 2024-04-14
EDOtrans-0.2.2/EDOtrans/inst |only EDOtrans-0.2.5/EDOtrans/DESCRIPTION | 6 +- EDOtrans-0.2.5/EDOtrans/MD5 | 12 ++--- EDOtrans-0.2.5/EDOtrans/NAMESPACE | 6 +- EDOtrans-0.2.5/EDOtrans/R/EDOtrans.R | 42 ++++++++++---------- EDOtrans-0.2.5/EDOtrans/R/combinedModesParameters.R | 10 ++++ EDOtrans-0.2.5/EDOtrans/R/get_seed.R |only EDOtrans-0.2.5/EDOtrans/man/EDOtrans.Rd | 4 - 8 files changed, 45 insertions(+), 35 deletions(-)
Title: Robust Confidence Intervals for Standardized Regression
Coefficients
Description: Generates robust confidence intervals for standardized regression coefficients
using heteroskedasticity-consistent standard errors for models fitted by lm()
as described in Dudgeon (2017) <doi:10.1007/s11336-017-9563-z>.
The package can also be used to generate confidence intervals for R-squared,
adjusted R-squared, and differences of standardized regression coefficients.
A description of the package and code examples
are presented in Pesigan, Sun, and Cheung (2023) <doi:10.1080/00273171.2023.2201277>.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaSandwich versions 1.0.6 dated 2023-10-14 and 1.0.7 dated 2024-04-14
DESCRIPTION | 10 ++++++---- MD5 | 10 +++++----- NEWS.md | 6 ++++++ build/partial.rdb |binary data/nas1982.rda |binary man/betaSandwich-package.Rd | 4 ++-- 6 files changed, 19 insertions(+), 11 deletions(-)
Title: Bootstrap for Regression Effect Sizes
Description: Generates nonparametric bootstrap confidence intervals
(Efron & Tibshirani, 1993: <doi:10.1201/9780429246593>)
for standardized regression coefficients (beta) and other effect sizes,
including multiple correlation, semipartial correlations,
improvement in R-squared, squared partial correlations,
and differences in standardized regression coefficients,
for models fitted by lm().
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaNB versions 1.0.3 dated 2023-10-14 and 1.0.4 dated 2024-04-14
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS.md | 6 ++++++ build/partial.rdb |binary data/nas1982.rda |binary man/betaNB-package.Rd | 2 +- 6 files changed, 16 insertions(+), 10 deletions(-)
Title: Monte Carlo for Regression Effect Sizes
Description: Generates Monte Carlo confidence intervals
for standardized regression coefficients (beta) and other effect sizes,
including multiple correlation, semipartial correlations,
improvement in R-squared, squared partial correlations,
and differences in standardized regression coefficients,
for models fitted by lm().
'betaMC' combines ideas from Monte Carlo confidence intervals for the indirect effect
(Pesigan and Cheung, 2023 <doi:10.3758/s13428-023-02114-4>)
and the sampling covariance matrix of regression coefficients
(Dudgeon, 2017 <doi:10.1007/s11336-017-9563-z>)
to generate confidence intervals effect sizes in regression.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaMC versions 1.3.1 dated 2023-10-14 and 1.3.2 dated 2024-04-14
DESCRIPTION | 8 ++++---- MD5 | 24 ++++++++++++------------ NEWS.md | 6 ++++++ R/semmcci-theta-hat-star-dot.R | 4 +--- build/partial.rdb |binary data/nas1982.rda |binary man/BetaMC.Rd | 2 +- man/DeltaRSqMC.Rd | 2 +- man/DiffBetaMC.Rd | 2 +- man/PCorMC.Rd | 2 +- man/RSqMC.Rd | 2 +- man/SCorMC.Rd | 2 +- man/betaMC-package.Rd | 2 +- 13 files changed, 30 insertions(+), 26 deletions(-)
Title: Confidence Intervals for Standardized Regression Coefficients
Description: Generates confidence intervals for standardized regression coefficients
using delta method standard errors for models fitted by lm()
as described in Yuan and Chan (2011) <doi:10.1007/s11336-011-9224-6>
and Jones and Waller (2015) <doi:10.1007/s11336-013-9380-y>.
The package can also be used to generate confidence intervals for
differences of standardized regression coefficients
and as a general approach to performing the delta method.
A description of the package and code examples
are presented in Pesigan, Sun, and Cheung (2023) <doi:10.1080/00273171.2023.2201277>.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaDelta versions 1.0.4 dated 2023-11-03 and 1.0.5 dated 2024-04-14
DESCRIPTION | 11 +++++++---- MD5 | 10 +++++----- NEWS.md | 8 ++++++++ build/partial.rdb |binary data/nas1982.rda |binary man/betaDelta-package.Rd | 4 ++-- 6 files changed, 22 insertions(+), 11 deletions(-)
Title: Functions to Help in your Coding Etiquette
Description: Adds some functions to help in your coding etiquette.
'tinycodet' primarily focuses on 4 aspects.
1) Safer decimal (in)equality testing,
safer atomic typecasting,
standard-evaluated alternatives to with() and aes(),
and other functions for safer coding.
2) A new package import system,
that attempts to combine the benefits of using a package without attaching it,
with the benefits of attaching a package.
3) Extending the string manipulation capabilities of the 'stringi' R package.
4) Reducing repetitive code.
Besides linking to 'Rcpp', 'tinycodet' has only one other dependency, namely 'stringi'.
Author: Tony Wilkes [aut, cre, cph]
Maintainer: Tony Wilkes <tony_a_wilkes@outlook.com>
Diff between tinycodet versions 0.4.5 dated 2024-03-02 and 0.4.6 dated 2024-04-14
tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-atomic_conversions.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-constants.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-decimal-between.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-decimal-eq.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-decimal-is_wholenumber.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-form.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_LL.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_as.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_data.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_general.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_inops-alias.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_inops-pkgs.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_inops.control.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_int.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-import_lock.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-internal.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-pkgs.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-pro.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-pversion.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-s_pattern.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-str_arithmetic.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-str_search.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-str_search_at.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-str_subset_ops.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-strcut.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-strfind.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-stri_join_mat.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-stri_locate_ith.R |only tinycodet-0.4.5/tinycodet/inst/tinytest/regular/test-x.import.R |only tinycodet-0.4.6/tinycodet/DESCRIPTION | 13 tinycodet-0.4.6/tinycodet/MD5 | 146 ++-- tinycodet-0.4.6/tinycodet/NAMESPACE | 2 tinycodet-0.4.6/tinycodet/NEWS.md | 9 tinycodet-0.4.6/tinycodet/R/RcppExports.R | 14 tinycodet-0.4.6/tinycodet/R/atomic_conversions.R | 32 tinycodet-0.4.6/tinycodet/R/decimal_truth.R | 33 tinycodet-0.4.6/tinycodet/R/form.R | 1 tinycodet-0.4.6/tinycodet/R/import_as.R | 15 tinycodet-0.4.6/tinycodet/R/import_inops.R | 22 tinycodet-0.4.6/tinycodet/R/inplace.R | 2 tinycodet-0.4.6/tinycodet/R/s_pattern.R | 38 - tinycodet-0.4.6/tinycodet/R/str_arithmetic.R | 46 - tinycodet-0.4.6/tinycodet/R/str_search.R | 365 ++-------- tinycodet-0.4.6/tinycodet/R/str_subset_ops.R | 33 tinycodet-0.4.6/tinycodet/R/strcut.R | 32 tinycodet-0.4.6/tinycodet/R/strfind_internal.R |only tinycodet-0.4.6/tinycodet/R/stri_join_mat.R | 60 - tinycodet-0.4.6/tinycodet/R/stri_locate_ith.R | 238 +----- tinycodet-0.4.6/tinycodet/R/tinycodet_help.R | 5 tinycodet-0.4.6/tinycodet/R/tinycodet_strings.R | 2 tinycodet-0.4.6/tinycodet/R/transform_if.R | 6 tinycodet-0.4.6/tinycodet/build/partial.rdb |binary tinycodet-0.4.6/tinycodet/inst/examples |only tinycodet-0.4.6/tinycodet/inst/tinytest/count/count_number_of_tests.R | 50 + tinycodet-0.4.6/tinycodet/inst/tinytest/import |only tinycodet-0.4.6/tinycodet/inst/tinytest/safer |only tinycodet-0.4.6/tinycodet/inst/tinytest/strings |only tinycodet-0.4.6/tinycodet/man/aaa0_tinycodet_help.Rd | 5 tinycodet-0.4.6/tinycodet/man/aaa3_tinycodet_strings.Rd | 2 tinycodet-0.4.6/tinycodet/man/atomic_conversions.Rd | 13 tinycodet-0.4.6/tinycodet/man/form.Rd | 1 tinycodet-0.4.6/tinycodet/man/inplace.Rd | 2 tinycodet-0.4.6/tinycodet/man/s_pattern.Rd | 7 tinycodet-0.4.6/tinycodet/man/str_arithmetic.Rd | 3 tinycodet-0.4.6/tinycodet/man/str_search.Rd | 43 - tinycodet-0.4.6/tinycodet/man/str_subset_ops.Rd | 8 tinycodet-0.4.6/tinycodet/man/strcut.Rd | 4 tinycodet-0.4.6/tinycodet/man/stri_join_mat.Rd | 1 tinycodet-0.4.6/tinycodet/man/stri_locate_ith.Rd | 31 tinycodet-0.4.6/tinycodet/src/RcppExports.cpp | 38 - tinycodet-0.4.6/tinycodet/src/rcpp_stri_locate_ith.cpp | 79 +- tinycodet-0.4.6/tinycodet/tests/tinytest.R | 3 72 files changed, 534 insertions(+), 870 deletions(-)
Title: Calculation and Visualization of the Impact Effect Size Measure
Description: A non-parametric effect size measure capturing changes in central tendency or shape of data distributions. The package provides the necessary functions to calculate and plot the Impact effect size measure between two groups.
Author: Joern Loetsch [aut,cre] ,
Alfred Ultsch [aut]
Maintainer: Jorn Lotsch <j.loetsch@em.uni-frankfurt.de>
Diff between ImpactEffectsize versions 0.6.3 dated 2024-01-16 and 0.7 dated 2024-04-14
DESCRIPTION | 8 +- MD5 | 10 +- R/ClassGMD.R | 27 +++--- R/Impact.R | 51 +++++++------ R/ParetoDensityEstimationIE.R | 163 +++++++++++++++++++----------------------- R/plot2Densities.R | 42 ++++++---- 6 files changed, 152 insertions(+), 149 deletions(-)
More information about ImpactEffectsize at CRAN
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Title: Optimal Distribution Preserving Down-Sampling of Bio-Medical
Data
Description: An optimized method for distribution-preserving class-proportional down-sampling of bio-medical data.
Author: Jorn Lotsch [aut,cre] ,
Sebastian Malkusch [aut] ,
Alfred Ultsch [aut]
Maintainer: Jorn Lotsch <j.lotsch@em.uni-frankfurt.de>
Diff between opdisDownsampling versions 0.8.3 dated 2023-12-13 and 1.0 dated 2024-04-14
DESCRIPTION | 8 - MD5 | 26 +++-- NAMESPACE | 8 - R/CompDistrib.R | 76 ++++++++-------- R/CompareReducedDataMat.R |only R/EucDist.R | 27 ++++- R/KullbLeiblKLD2.R | 92 ++++++++++--------- R/MakeReducedDataMat.R | 54 ++++++----- R/SmoothDensHist1dim.R | 218 ++++++++++++++++++++++++---------------------- R/amrdd.R | 37 +++++-- R/get_seed.R |only R/globals.R |only R/opdisDownsampling.R | 218 +++++++++++++++++----------------------------- R/relevant_PCAvariables.R | 47 ++++++--- R/sample_and_analyze.R |only man/opdisDownsampling.Rd | 4 16 files changed, 417 insertions(+), 398 deletions(-)
More information about opdisDownsampling at CRAN
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Title: Streamline Access to Cancer Screening Data
Description: Retrieve cancer screening data for cervical, breast and colorectal
cancers from the Kenya Health Information System <https://hiskenya.org> in a
consistent way.
Author: David Kariuki [aut, cre, cph]
Maintainer: David Kariuki <hello@damurka.com>
Diff between cancerscreening versions 1.0.2 dated 2024-01-09 and 1.1.0 dated 2024-04-14
cancerscreening-1.0.2/cancerscreening/R/AuthCred-class.R |only cancerscreening-1.0.2/cancerscreening/R/api_get.R |only cancerscreening-1.0.2/cancerscreening/R/filter_organisation_units.R |only cancerscreening-1.0.2/cancerscreening/R/get_analytics.R |only cancerscreening-1.0.2/cancerscreening/R/get_category_options_metadata.R |only cancerscreening-1.0.2/cancerscreening/R/khis_cred.R |only cancerscreening-1.0.2/cancerscreening/R/utils-pipe.R |only cancerscreening-1.0.2/cancerscreening/R/zzz.R |only cancerscreening-1.0.2/cancerscreening/man/get_analytics.Rd |only cancerscreening-1.0.2/cancerscreening/man/get_category_options_metadata.Rd |only cancerscreening-1.0.2/cancerscreening/man/khis_cred.Rd |only cancerscreening-1.0.2/cancerscreening/man/khis_cred_clear.Rd |only cancerscreening-1.0.2/cancerscreening/man/khis_has_cred.Rd |only cancerscreening-1.0.2/cancerscreening/man/khis_username.Rd |only cancerscreening-1.0.2/cancerscreening/man/pipe.Rd |only cancerscreening-1.0.2/cancerscreening/tests/testthat/test-get_analytics.R |only cancerscreening-1.0.2/cancerscreening/tests/testthat/test-khis_cred.R |only cancerscreening-1.1.0/cancerscreening/DESCRIPTION | 12 cancerscreening-1.1.0/cancerscreening/MD5 | 119 ++--- cancerscreening-1.1.0/cancerscreening/NAMESPACE | 35 - cancerscreening-1.1.0/cancerscreening/NEWS.md | 31 + cancerscreening-1.1.0/cancerscreening/R/cancerscreening-package.R | 20 cancerscreening-1.1.0/cancerscreening/R/get_analytics_formatted.R |only cancerscreening-1.1.0/cancerscreening/R/get_breast_cbe.R | 22 cancerscreening-1.1.0/cancerscreening/R/get_breast_data.R | 35 - cancerscreening-1.1.0/cancerscreening/R/get_breast_mammogram.R | 17 cancerscreening-1.1.0/cancerscreening/R/get_breast_ultrasound.R | 17 cancerscreening-1.1.0/cancerscreening/R/get_cervical_data.R | 39 - cancerscreening-1.1.0/cancerscreening/R/get_cervical_hiv_screened.R | 16 cancerscreening-1.1.0/cancerscreening/R/get_cervical_positive.R | 24 - cancerscreening-1.1.0/cancerscreening/R/get_cervical_screened.R | 24 - cancerscreening-1.1.0/cancerscreening/R/get_cervical_treated.R | 24 - cancerscreening-1.1.0/cancerscreening/R/get_colorectal_colonoscopy.R | 15 cancerscreening-1.1.0/cancerscreening/R/get_colorectal_data.R | 36 - cancerscreening-1.1.0/cancerscreening/R/get_colorectal_fobt.R | 15 cancerscreening-1.1.0/cancerscreening/R/get_data_elements_metadata.R | 54 -- cancerscreening-1.1.0/cancerscreening/R/get_data_sets_formatted.R |only cancerscreening-1.1.0/cancerscreening/R/get_lab_bone_marrow.R |only cancerscreening-1.1.0/cancerscreening/R/get_lab_fluid_cytology.R |only cancerscreening-1.1.0/cancerscreening/R/get_lab_fna.R |only cancerscreening-1.1.0/cancerscreening/R/get_lab_smears.R |only cancerscreening-1.1.0/cancerscreening/R/get_lab_tissue_histology.R |only cancerscreening-1.1.0/cancerscreening/R/get_organisation_units_metadata.R | 117 ++-- cancerscreening-1.1.0/cancerscreening/R/reexport-khis_cred.R |only cancerscreening-1.1.0/cancerscreening/R/reexport-magrittr.R |only cancerscreening-1.1.0/cancerscreening/R/summary.R |only cancerscreening-1.1.0/cancerscreening/R/sysdata.R | 72 --- cancerscreening-1.1.0/cancerscreening/R/sysdata.rda |binary cancerscreening-1.1.0/cancerscreening/R/target_population.R | 22 cancerscreening-1.1.0/cancerscreening/README.md | 235 +++++----- cancerscreening-1.1.0/cancerscreening/build/vignette.rds |binary cancerscreening-1.1.0/cancerscreening/inst/doc/cancerscreening.R | 8 cancerscreening-1.1.0/cancerscreening/inst/doc/cancerscreening.Rmd | 29 - cancerscreening-1.1.0/cancerscreening/inst/doc/cancerscreening.html | 34 + cancerscreening-1.1.0/cancerscreening/inst/secret/secret.json | 10 cancerscreening-1.1.0/cancerscreening/man/get_analytics_formatted.Rd |only cancerscreening-1.1.0/cancerscreening/man/get_breast_cbe.Rd | 25 - cancerscreening-1.1.0/cancerscreening/man/get_breast_mammogram.Rd | 21 cancerscreening-1.1.0/cancerscreening/man/get_breast_ultrasound.Rd | 21 cancerscreening-1.1.0/cancerscreening/man/get_cervical_hiv_screened.Rd | 22 cancerscreening-1.1.0/cancerscreening/man/get_cervical_positive.Rd | 21 cancerscreening-1.1.0/cancerscreening/man/get_cervical_screened.Rd | 19 cancerscreening-1.1.0/cancerscreening/man/get_cervical_treated.Rd | 21 cancerscreening-1.1.0/cancerscreening/man/get_colorectal_colonoscopy.Rd | 21 cancerscreening-1.1.0/cancerscreening/man/get_colorectal_fobt.Rd | 21 cancerscreening-1.1.0/cancerscreening/man/get_data_elements_metadata.Rd | 15 cancerscreening-1.1.0/cancerscreening/man/get_data_sets_formatted.Rd |only cancerscreening-1.1.0/cancerscreening/man/get_filtered_population.Rd | 4 cancerscreening-1.1.0/cancerscreening/man/get_lab_bone_marrow.Rd |only cancerscreening-1.1.0/cancerscreening/man/get_lab_fluid_cytology.Rd |only cancerscreening-1.1.0/cancerscreening/man/get_lab_fna.Rd |only cancerscreening-1.1.0/cancerscreening/man/get_lab_smears.Rd |only cancerscreening-1.1.0/cancerscreening/man/get_lab_tissue_histology.Rd |only cancerscreening-1.1.0/cancerscreening/man/get_organisation_units_metadata.Rd | 19 cancerscreening-1.1.0/cancerscreening/man/reexports.Rd |only cancerscreening-1.1.0/cancerscreening/man/target_population.Rd | 13 cancerscreening-1.1.0/cancerscreening/tests/testthat/helper.R | 6 cancerscreening-1.1.0/cancerscreening/vignettes/cancerscreening.Rmd | 29 - 78 files changed, 618 insertions(+), 742 deletions(-)
More information about cancerscreening at CRAN
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Title: The Q-Matrix Validation Methods Framework
Description: Provide a variety of Q-matrix validation methods for the generalized cognitive diagnosis models, including the method based on the generalized deterministic input, noisy, and gate model (G-DINA) by de la Torre (2011) <DOI:10.1007/s11336-011-9207-7> discrimination index (the GDI method) by de la Torre and Chiu (2016) <DOI:10.1007/s11336-015-9467-8>, the step-wise Wald test method (the Wald method) by Ma and de la Torre (2020) <DOI:10.1111/bmsp.12156>, the Hull method by Najera et al. (2021) <DOI:10.1111/bmsp.12228>, the multiple logistic regression‑based Q‑matrix validation method (the MLR-B method) by Tu et al. (2022) <DOI:10.3758/s13428-022-01880-x>. Different research methods during Q-matrix validating are available.
Author: Haijiang Qin [aut, cre, cph],
Lei Guo [aut, cph]
Maintainer: Haijiang Qin <haijiang133@outlook.com>
Diff between Qval versions 0.1.5 dated 2024-03-02 and 0.1.6 dated 2024-04-14
DESCRIPTION | 8 ++++---- MD5 | 20 ++++++++++---------- R/CDM.R | 6 +++--- R/GDI.R | 4 ++-- R/Hull.R | 4 ++-- R/MLR-B.R | 6 +++--- R/fit.R | 5 +++-- R/validation.R | 18 +++++++++++++----- man/CDM.Rd | 6 +++--- man/validation.Rd | 8 ++++++++ tests/demo.R | 1 + 11 files changed, 52 insertions(+), 34 deletions(-)
Title: Retrieve Data from Kenya Health Information System (KHIS)
Description: Simplify data retrieval from Kenya's health system with a powerful interface
for efficient data retrieval from the Kenya Health Information System
(KHIS) <https://hiskenya.org>. Empower researchers, analysts, and healthcare
professionals to access critical health data efficiently.
Author: David Kariuki [aut, cre, cph]
Maintainer: David Kariuki <hello@damurka.com>
Diff between khisr versions 1.0.1 dated 2024-02-05 and 1.0.2 dated 2024-04-14
DESCRIPTION | 8 MD5 | 20 - NEWS.md | 6 R/AuthCred-class.R | 209 ++++++++------- R/khis_cred.R | 631 ++++++++++++++++++++++++------------------------ R/zzz.R | 36 +- README.md | 10 inst/doc/khisr.R | 66 ----- inst/doc/khisr.html | 175 +++---------- inst/secret/secret.json | 15 - man/khisr-package.Rd | 2 11 files changed, 520 insertions(+), 658 deletions(-)
Title: Diet Mendelian Randomization
Description: Encodes several methods for performing Mendelian randomization analyses with summarized data. Similar to the 'MendelianRandomization' package, but with fewer bells and whistles, and less frequent updates. As described in Yavorska (2017) <doi:10.1093/ije/dyx034> and Broadbent (2020) <doi:10.12688/wellcomeopenres.16374.2>.
Author: Stephen Burgess [aut, cre] ,
Olena Yavorska [aut],
James Staley [ctb] ,
Fernando Hartwig [ctb] ,
Jim Broadbent [ctb] ,
Christopher Foley [ctb] ,
Andrew Grant [ctb],
Amy Mason [ctb] ,
Ting Ye [ctb] ,
Haoran Xue [ctb] ,
Zhaotong Lin [ctb] ,
Siqi Xu [ct [...truncated...]
Maintainer: Stephen Burgess <sb452@medschl.cam.ac.uk>
Diff between MRZero versions 0.1.0 dated 2023-08-16 and 0.2.0 dated 2024-04-14
DESCRIPTION | 28 +++++++++--- MD5 | 31 ++++++++----- NAMESPACE | 4 + NEWS | 7 +++ R/AllClasses.R | 80 +++++++++++++++++++++++++++++++++++ R/AllGenerics.R | 112 +++++++++++++++++++++++++++++++++++++++++++++++-- R/getter-methods.R | 10 ++++ R/mr_clr-methods.R |only R/mr_mvivwme-methods.R |only R/mr_mvpcgmm-methods.R | 4 - R/mr_pcgmm-methods.R | 4 - R/show-methods.R | 74 ++++++++++++++++++++++++++++++++ man/CLR-class.Rd |only man/MVIVWME-class.Rd |only man/getter.Rd | 6 ++ man/mr_clr.Rd |only man/mr_mvivwme.Rd |only man/mr_mvpcgmm.Rd | 6 +- man/mr_pcgmm.Rd | 6 +- man/mv_norm.Rd |only 20 files changed, 338 insertions(+), 34 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-04-12 0.0.1