Title: Mediation, Moderation and Moderated-Mediation After Model
Fitting
Description: Computes indirect effects, conditional effects, and conditional
indirect effects in a structural equation model or path model after model
fitting, with no need to define any user parameters or label any paths in
the model syntax, using the approach presented in Cheung and Cheung
(2023) <doi:10.3758/s13428-023-02224-z>. Can also form bootstrap
confidence intervals by doing bootstrapping only once and reusing the
bootstrap estimates in all subsequent computations. Supports bootstrap
confidence intervals for standardized (partially or completely) indirect
effects, conditional effects, and conditional indirect effects as described
in Cheung (2009) <doi:10.3758/BRM.41.2.425> and Cheung, Cheung, Lau, Hui,
and Vong (2022) <doi:10.1037/hea0001188>. Model fitting can be done by
structural equation modeling using lavaan() or regression using lm().
Author: Shu Fai Cheung [aut, cre] ,
Sing-Hang Cheung [aut]
Maintainer: Shu Fai Cheung <shufai.cheung@gmail.com>
Diff between manymome versions 0.2.1 dated 2024-05-07 and 0.2.2 dated 2024-06-05
DESCRIPTION | 6 MD5 | 86 NEWS.md | 38 R/boot2est_lavaan.R | 25 R/boot_ci.R |only R/cond_indirect.R | 55 R/cond_indirect_diff.R | 62 R/cond_indirect_effects_math.R | 34 R/confint_delta_med.R | 34 R/confint_indirect.R | 63 R/delta_med.R | 36 R/index_mome.R | 45 R/indirect.R | 1 R/indirect_proportion.R | 22 R/lm2list.R | 8 R/print_cond_indirect_effect.R | 10 R/print_delta_med.R | 39 R/print_indirect.R | 10 R/print_indirect_list.R | 10 README.md | 5 inst/doc/do_boot.Rmd | 1147 +++---- inst/doc/do_boot.html | 288 - inst/doc/manymome.Rmd | 2374 +++++++-------- inst/doc/manymome.html | 241 - inst/doc/mod_levels.html | 450 +- man/cond_indirect.Rd | 15 man/cond_indirect_diff.Rd | 9 man/confint.delta_med.Rd | 13 man/confint.indirect.Rd | 13 man/delta_med.Rd | 13 man/index_of_mome.Rd | 12 man/math_indirect.Rd | 8 man/print.delta_med.Rd | 13 tests/testthat/test_boot_ci_internal_bc.R |only tests/testthat/test_cond_indirect_effects_lm_one_model.R |only tests/testthat/test_cond_indirect_lm_one_model.R |only tests/testthat/test_delta_med_boot.R | 6 tests/testthat/test_lm2list.R | 3 vignettes/do_boot.Rmd | 1147 +++---- vignettes/do_boot.Rmd.original | 40 vignettes/do_boot_draw_model-1.png |binary vignettes/manymome.Rmd | 2374 +++++++-------- vignettes/manymome.Rmd.original | 32 vignettes/manymome_draw_med-1.png |binary vignettes/manymome_draw_model-1.png |binary vignettes/manymome_plot_mome1-1.png |binary 46 files changed, 4666 insertions(+), 4121 deletions(-)
Title: A Package for Graphical Modelling in R
Description: The 'gRbase' package provides graphical modelling features
used by e.g. the packages 'gRain', 'gRim' and 'gRc'. 'gRbase' implements
graph algorithms including (i) maximum cardinality search (for marked
and unmarked graphs).
(ii) moralization, (iii) triangulation, (iv) creation of junction tree.
'gRbase' facilitates array operations,
'gRbase' implements functions for testing for conditional independence.
'gRbase' illustrates how hierarchical log-linear models may be
implemented and describes concept of graphical meta
data.
The facilities of the package are documented in the book by Højsgaard,
Edwards and Lauritzen (2012,
<doi:10.1007/978-1-4614-2299-0>) and in the paper by
Dethlefsen and Højsgaard, (2005, <doi:10.18637/jss.v014.i17>).
Please see 'citation("gRbase")' for citation details.
Author: Soeren Hoejsgaard <sorenh@math.aau.dk>
Maintainer: Soeren Hoejsgaard <sorenh@math.aau.dk>
Diff between gRbase versions 2.0.1 dated 2023-11-29 and 2.0.2 dated 2024-06-05
gRbase-2.0.1/gRbase/inst/doc/arrays.Rnw |only gRbase-2.0.1/gRbase/inst/doc/arrays.pdf |only gRbase-2.0.1/gRbase/inst/doc/graphs_chapter.R |only gRbase-2.0.1/gRbase/inst/doc/graphs_chapter.Rnw |only gRbase-2.0.1/gRbase/inst/doc/graphs_chapter.pdf |only gRbase-2.0.1/gRbase/man/ZOLD-gModel.Rd |only gRbase-2.0.1/gRbase/man/ZOLD-gRfit.Rd |only gRbase-2.0.1/gRbase/man/ZOLD-gmData.Rd |only gRbase-2.0.1/gRbase/man/ZOLD-hllm.Rd |only gRbase-2.0.1/gRbase/man/ZOLD-validVarTypes.Rd |only gRbase-2.0.1/gRbase/man/dag2chol.Rd |only gRbase-2.0.1/gRbase/vignettes/arrays.Rnw |only gRbase-2.0.1/gRbase/vignettes/graphs_chapter.Rnw |only gRbase-2.0.2/gRbase/DESCRIPTION | 14 gRbase-2.0.2/gRbase/MD5 | 88 + gRbase-2.0.2/gRbase/NAMESPACE | 66 - gRbase-2.0.2/gRbase/NEWS | 9 gRbase-2.0.2/gRbase/R/NAMESPACE_grbase.R | 3 gRbase-2.0.2/gRbase/R/RcppExports.R | 4 gRbase-2.0.2/gRbase/R/api_setops.R | 5 gRbase-2.0.2/gRbase/R/graph_utilities.R | 154 ++- gRbase-2.0.2/gRbase/R/process_formula.R | 170 +-- gRbase-2.0.2/gRbase/R/yyOLD_grbase.R | 1176 ++++++++++------------- gRbase-2.0.2/gRbase/build/vignette.rds |binary gRbase-2.0.2/gRbase/data/prostate.RData |only gRbase-2.0.2/gRbase/inst/doc/arrays.R | 45 gRbase-2.0.2/gRbase/inst/doc/arrays.html |only gRbase-2.0.2/gRbase/inst/doc/arrays.rmd |only gRbase-2.0.2/gRbase/inst/doc/graphs.R |only gRbase-2.0.2/gRbase/inst/doc/graphs.html |only gRbase-2.0.2/gRbase/inst/doc/graphs.rmd |only gRbase-2.0.2/gRbase/man/data_handling.Rd |only gRbase-2.0.2/gRbase/man/edge_matrix.Rd |only gRbase-2.0.2/gRbase/man/graph-clique.Rd | 7 gRbase-2.0.2/gRbase/man/graph-edgeList.Rd | 2 gRbase-2.0.2/gRbase/man/graph-randomdag.Rd | 2 gRbase-2.0.2/gRbase/man/graph_vpar.Rd | 4 gRbase-2.0.2/gRbase/man/prostate.Rd |only gRbase-2.0.2/gRbase/man/set-operations.Rd | 3 gRbase-2.0.2/gRbase/src/RcppExports.cpp | 12 gRbase-2.0.2/gRbase/src/filter_vectors.cpp |only gRbase-2.0.2/gRbase/src/init.c | 192 +-- gRbase-2.0.2/gRbase/vignettes/arrays.rmd |only gRbase-2.0.2/gRbase/vignettes/fig |only gRbase-2.0.2/gRbase/vignettes/graphs.rmd |only gRbase-2.0.2/gRbase/vignettes/obsolete_vignette |only 46 files changed, 934 insertions(+), 1022 deletions(-)
Title: Universal Graphics Device
Description: A unified R graphics backend. Render R graphics fast and easy to many common file formats.
Provides a thread safe 'C' interface for asynchronous rendering of R graphics.
Author: Florian Rupprecht [aut, cre] ,
Kun Ren [ctb],
Tatsuya Shima [ctb],
Jeroen Ooms [ctb] ,
Hadley Wickham [cph] ,
Lionel Henry [cph] ,
Thomas Lin Pedersen [cph] ,
T Jake Luciani [cph] ,
Matthieu Decorde [cph] ,
Vaudor Lise [cph] ,
Tony Plate [cph] ,
Davi [...truncated...]
Maintainer: Florian Rupprecht <floruppr@gmail.com>
Diff between unigd versions 0.1.1 dated 2024-03-25 and 0.1.2 dated 2024-06-05
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NEWS.md | 6 ++++++ inst/doc/a00_installation.Rmd | 40 ++++++++++++++++++++++++++++++++++++++++ inst/doc/a00_installation.html | 30 +++++++++++++++++++++++++++--- src/base_64.cpp | 2 +- src/generic_dev.h | 17 ++++++++++++++++- src/unigd_external.cpp | 4 ++-- vignettes/a00_installation.Rmd | 40 ++++++++++++++++++++++++++++++++++++++++ 9 files changed, 143 insertions(+), 18 deletions(-)
Title: Spatially Explicit Capture-Recapture
Description: Functions to estimate the density and size of a spatially
distributed animal population sampled with an array of passive detectors,
such as traps, or by searching polygons or transects. Models incorporating
distance-dependent detection are fitted by maximizing the likelihood.
Tools are included for data manipulation and model selection.
Author: Murray Efford [aut, cre] ,
Philipp Jund [ctb] ),
David Fletcher [ctb] )
Maintainer: Murray Efford <murray.efford@otago.ac.nz>
Diff between secr versions 4.6.6 dated 2024-02-29 and 4.6.7 dated 2024-06-05
DESCRIPTION | 12 +- MD5 | 54 ++++----- NAMESPACE | 3 NEWS | 18 +++ R/RcppExports.R | 20 +-- R/make.spcosa.R |only R/methods.R | 10 + R/onLoad.R | 7 + R/plot.traps.R | 2 R/rbind.capthist.R | 48 ++++++++ R/read.traps.R | 2 R/reduce.R | 4 R/sim.capthist.R | 264 ++++++++++++++++++++++++++------------------ R/sim.popn.R | 46 ++++--- R/trap.builder.R | 10 - R/utility.R | 9 + inst/doc/secr-datainput.pdf |binary inst/doc/secr-overview.pdf |binary man/gridcells.Rd | 2 man/make.spcosa.Rd |only man/make.traps.Rd | 12 +- man/rbind.capthist.Rd | 8 + man/secr-package.Rd | 4 man/sim.popn.Rd | 9 - man/trap.builder.Rd | 2 man/trapsfn.Rd | 5 man/utility.Rd | 12 ++ src/RcppExports.cpp | 45 ++++--- src/trapping.cpp | 37 ++++-- 29 files changed, 419 insertions(+), 226 deletions(-)
Title: Runs Monte Carlo Markov Chain - With Either 'JAGS', 'nimble' or
'greta' - While Adjusting Burn-in and Thinning Parameters
Description: The function runMCMC_btadjust() returns a mcmc.list object which is the output of a
Markov Chain Monte Carlo obtained - from either 'JAGS', 'nimble' or 'greta' -
after adjusting burn-in and thinning parameters to meet pre-specified criteria
in terms of convergence & effective sample size. Used with 'nimble', runMCMC_btadjust()
allows extra calculations (e.g. information criteria for model comparison and goodness-of-fit
p-values for model diagnosis).
Author: Frederic Gosselin [cre, aut] ,
Institut national de recherche pour l'agriculture, l'alimentation et
l'environnement [cph]
Maintainer: Frederic Gosselin <frederic.gosselin@inrae.fr>
Diff between runMCMCbtadjust versions 1.1.0 dated 2024-04-25 and 1.1.1 dated 2024-06-05
runMCMCbtadjust-1.1.0/runMCMCbtadjust/inst/doc/runMCMCbtadjust_Presentation.R |only runMCMCbtadjust-1.1.0/runMCMCbtadjust/man/fragments/Nimble&Jags2_fragment.rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/DESCRIPTION | 15 runMCMCbtadjust-1.1.1/runMCMCbtadjust/MD5 | 52 runMCMCbtadjust-1.1.1/runMCMCbtadjust/NEWS.md | 39 runMCMCbtadjust-1.1.1/runMCMCbtadjust/R/findMCMC_strong_corrs.R | 17 runMCMCbtadjust-1.1.1/runMCMCbtadjust/R/runMCMC_btadjust.r | 750 +++-- runMCMCbtadjust-1.1.1/runMCMCbtadjust/R/runMCMCbtadjust-package.R | 2 runMCMCbtadjust-1.1.1/runMCMCbtadjust/build/vignette.rds |binary runMCMCbtadjust-1.1.1/runMCMCbtadjust/inst/doc/runMCMCbtadjust_Nimble_variations.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/inst/doc/runMCMCbtadjust_Nimble_variations.html |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/inst/doc/runMCMCbtadjust_Presentation.Rmd | 1339 +++++++++- runMCMCbtadjust-1.1.1/runMCMCbtadjust/inst/doc/runMCMCbtadjust_Presentation.html | 974 ++++--- runMCMCbtadjust-1.1.1/runMCMCbtadjust/inst/doc/runMCMCbtadjust_extraCalculations.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/inst/doc/runMCMCbtadjust_extraCalculations.html |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/figures |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/findMCMC_strong_corrs.Rd | 13 runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Greta_fragment.Rmd | 2 runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Jags_fragment.Rmd | 11 runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble1_alone_fragment.Rmd | 17 runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_and_Jags2_fragment.rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_extraCalculations_DIC_fragment.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_extraCalculations_DIC_parallel_fragment.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_extraCalculations_GOF_fragment.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_extraCalculations_GOF_parallel_fragment.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_samplers1_fragment.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_samplers_APT_fragment.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/fragments/Nimble_samplers_HMC_fragment.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/runMCMC_btadjust.Rd | 97 runMCMCbtadjust-1.1.1/runMCMCbtadjust/man/runMCMCbtadjust-package.Rd | 4 runMCMCbtadjust-1.1.1/runMCMCbtadjust/vignettes/references.bib | 147 + runMCMCbtadjust-1.1.1/runMCMCbtadjust/vignettes/runMCMCbtadjust_Nimble_variations.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/vignettes/runMCMCbtadjust_Nimble_variations.Rmd.orig |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/vignettes/runMCMCbtadjust_Presentation.Rmd | 1339 +++++++++- runMCMCbtadjust-1.1.1/runMCMCbtadjust/vignettes/runMCMCbtadjust_Presentation.Rmd.orig |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/vignettes/runMCMCbtadjust_extraCalculations.Rmd |only runMCMCbtadjust-1.1.1/runMCMCbtadjust/vignettes/runMCMCbtadjust_extraCalculations.Rmd.orig |only 37 files changed, 4048 insertions(+), 770 deletions(-)
More information about runMCMCbtadjust at CRAN
Permanent link
Title: Systematic Conservation Prioritization in R
Description: Systematic conservation prioritization using mixed integer linear
programming (MILP). It provides a flexible interface for building and
solving conservation planning problems. Once built, conservation planning
problems can be solved using a variety of commercial and open-source exact
algorithm solvers. By using exact algorithm solvers, solutions can be
generated that are guaranteed to be optimal (or within a pre-specified
optimality gap). Furthermore, conservation problems can be constructed to
optimize the spatial allocation of different management actions or zones,
meaning that conservation practitioners can identify solutions that benefit
multiple stakeholders. To solve large-scale or complex conservation
planning problems, users should install the Gurobi optimization software
(available from <https://www.gurobi.com/>) and the 'gurobi' R package (see
Gurobi Installation Guide vignette for details). Users can also install the
IBM CPLEX software (<https://www.ibm.com/products [...truncated...]
Author: Jeffrey O Hanson [aut] ,
Richard Schuster [aut, cre] ,
Nina Morrell [aut],
Matthew Strimas-Mackey [aut] ,
Brandon P M Edwards [aut] ,
Matthew E Watts [aut],
Peter Arcese [aut] ,
Joseph R Bennett [aut] ,
Hugh P Possingham [aut]
Maintainer: Richard Schuster <richard.schuster@glel.carleton.ca>
Diff between prioritizr versions 8.0.3 dated 2023-08-08 and 8.0.4 dated 2024-06-05
DESCRIPTION | 30 MD5 | 252 +-- NAMESPACE | 102 + NEWS.md | 1180 ++++++++++++--- R/ConservationProblem-class.R | 2 R/OptimizationProblem-class.R | 16 R/RcppExports.R | 8 R/add_cbc_solver.R | 7 R/add_connectivity_penalties.R | 2 R/add_contiguity_constraints.R | 2 R/add_cplex_solver.R | 34 R/add_default_portfolio.R |only R/add_extra_portfolio.R | 7 R/add_feature_contiguity_constraints.R | 2 R/add_gap_portfolio.R | 7 R/add_gurobi_solver.R | 44 R/add_highs_solver.R | 9 R/add_linear_constraints.R | 9 R/add_linear_penalties.R | 3 R/add_locked_in_constraints.R | 31 R/add_locked_out_constraints.R | 29 R/add_lpsymphony_solver.R | 3 R/add_rsymphony_solver.R | 3 R/add_shuffle_portfolio.R | 132 + R/add_top_portfolio.R | 8 R/adjacency_matrix.R | 1 R/all_binary.R | 27 R/all_columns_any_finite.R | 22 R/all_columns_inherit.R | 12 R/all_finite.R | 34 R/all_positive.R | 32 R/all_proportion.R | 21 R/any_nonNA.R | 42 R/any_nonzero.R | 32 R/as.R | 10 R/assertions.R | 8 R/binary_stack.R | 5 R/boundary_matrix.R | 2 R/category_layer.R | 5 R/connectivity_matrix.R | 3 R/fast_extract.R | 1 R/get_crs.R | 18 R/intersecting_units.R | 4 R/is_numeric_values.R | 29 R/is_same_crs.R | 4 R/is_spatial_extents_overlap.R | 7 R/package.R | 21 R/planning_unit_solution_status.R | 1 R/portfolios.R | 34 R/presolve_check.R | 25 R/print.R | 30 R/problem-deprecated.R | 52 R/problem.R | 82 - R/proximity_matrix.R | 1 R/repr.R | 39 R/rij_matrix.R | 3 R/simulate.R | 1 R/solve.R | 51 R/summary.R | 4 R/write_problem.R | 100 - R/zones.R | 4 README.md | 34 build/partial.rdb |binary build/vignette.rds |binary inst/doc/calibrating_trade-offs_tutorial.Rmd | 7 inst/doc/calibrating_trade-offs_tutorial.html | 409 ++--- inst/doc/connectivity_tutorial.Rmd | 3 inst/doc/connectivity_tutorial.html | 51 inst/doc/gurobi_installation_guide.Rmd | 2 inst/doc/gurobi_installation_guide.html | 16 inst/doc/management_zones_tutorial.Rmd | 3 inst/doc/management_zones_tutorial.html | 531 +++--- inst/doc/package_overview.Rmd | 2 inst/doc/package_overview.html | 180 +- inst/doc/prioritizr.Rmd | 3 inst/doc/prioritizr.html | 144 + inst/doc/publication_record.Rmd | 48 inst/doc/publication_record.html | 91 - inst/doc/solver_benchmarks.html | 59 man/OptimizationProblem-class.Rd | 27 man/add_cuts_portfolio.Rd | 1 man/add_default_portfolio.Rd |only man/add_extra_portfolio.Rd | 1 man/add_gap_portfolio.Rd | 1 man/add_linear_constraints.Rd | 6 man/add_shuffle_portfolio.Rd | 8 man/add_top_portfolio.Rd | 1 man/boundary_matrix.Rd | 2 man/figures/README-minimal_solution-1.png |binary man/portfolios.Rd | 34 man/prioritizr.Rd | 23 man/solve.Rd | 48 man/write_problem.Rd | 12 src/RcppExports.cpp | 18 src/functions.cpp | 15 src/functions.h | 7 src/init.c | 104 - src/optimization_problem.cpp | 122 + src/rcpp_asym_connectivity.cpp | 2 tests/testthat/helper_solve_fixed_seed.R |only tests/testthat/test_OptimizationProblem.R | 44 tests/testthat/test_add_cbc_solver.R | 53 tests/testthat/test_add_cplex_solver.R | 53 tests/testthat/test_add_default_portfolio.R |only tests/testthat/test_add_extra_portfolio.R | 27 tests/testthat/test_add_feature_contiguity_constraints.R | 2 tests/testthat/test_add_gap_portfolio.R | 54 tests/testthat/test_add_gurobi_solver.R | 53 tests/testthat/test_add_highs_solver.R | 53 tests/testthat/test_add_lpsymphony_solver.R | 53 tests/testthat/test_add_rsymphony_solver.R | 53 tests/testthat/test_add_shuffle_portfolio.R | 107 + tests/testthat/test_add_top_portfolio.R | 54 tests/testthat/test_assertions.R | 20 tests/testthat/test_compile.R | 60 tests/testthat/test_eval_replacement_importance.R | 7 tests/testthat/test_is_spatial_extents_overlap.R | 16 tests/testthat/test_presolve_check.R | 18 tests/testthat/test_problem.R | 31 tests/testthat/test_problem_negative.R | 163 +- tests/testthat/test_write_problem.R | 92 + tests/testthat/test_zones.R | 9 vignettes/calibrating_trade-offs_tutorial.Rmd | 7 vignettes/connectivity_tutorial.Rmd | 3 vignettes/gurobi_installation_guide.Rmd | 2 vignettes/management_zones_tutorial.Rmd | 3 vignettes/package_overview.Rmd | 2 vignettes/prioritizr.Rmd | 3 vignettes/publication_record.Rmd | 48 129 files changed, 4056 insertions(+), 1738 deletions(-)
Title: A 'HTTP' Server Graphics Device
Description: A graphics device for R that is accessible via network protocols.
This package was created to make it easier to embed live R graphics in
integrated development environments and other applications.
The included 'HTML/JavaScript' client (plot viewer) aims to provide a better overall user experience when dealing with R graphics.
The device asynchronously serves graphics via 'HTTP' and 'WebSockets'.
Author: Florian Rupprecht [aut, cre] ,
Kun Ren [ctb],
Jeroen Ooms [ctb]
Maintainer: Florian Rupprecht <floruppr@gmail.com>
Diff between httpgd versions 2.0.1 dated 2024-03-11 and 2.0.2 dated 2024-06-05
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 4 ++++ src/lib/crow/http_parser_merged.h | 4 ++-- 4 files changed, 12 insertions(+), 8 deletions(-)
Title: Group Elastic Net Regularized GLMs and GAMs
Description: Efficient algorithms for fitting generalized linear and additive models with group elastic net penalties as described in Helwig (2024) <doi:10.1080/10618600.2024.2362232>. Implements group LASSO, group MCP, and group SCAD with an optional group ridge penalty. Computes the regularization path for linear regression (gaussian), logistic regression (binomial), multinomial logistic regression (multinomial), log-linear count regression (poisson and negative.binomial), and log-linear continuous regression (gamma and inverse gaussian). Supports default and formula methods for model specification, k-fold cross-validation for tuning the regularization parameters, and nonparametric regression via tensor product reproducing kernel (smoothing spline) basis function expansion.
Author: Nathaniel E. Helwig [aut, cre]
Maintainer: Nathaniel E. Helwig <helwig@umn.edu>
Diff between grpnet versions 0.3 dated 2024-02-20 and 0.4 dated 2024-06-05
ChangeLog | 56 +++++++++++++ DESCRIPTION | 10 +- MD5 | 45 ++++++----- NAMESPACE | 8 + R/cv.compare.R |only R/cv.grpnet.default.R | 190 +++++++++++++++++++++++++++++------------------ R/cv.grpnet.formula.R | 5 - R/grpnet.default.R | 52 ++++++------ R/grpnet.formula.R | 12 +- R/predict.cv.grpnet.R | 4 R/rk.R | 6 - R/rk.model.matrix.R | 9 +- R/visualize.penalty.R |only R/visualize.shrink.R |only build/partial.rdb |binary inst |only man/coef.Rd | 2 man/cv.compare.Rd |only man/cv.grpnet.Rd | 9 +- man/grpnet.Rd | 22 ++--- man/plot.cv.grpnet.Rd | 2 man/plot.grpnet.Rd | 6 - man/predict.cv.grpnet.Rd | 4 man/predict.grpnet.Rd | 2 man/print.Rd | 2 man/visualize.penalty.Rd |only man/visualize.shrink.Rd |only 27 files changed, 295 insertions(+), 151 deletions(-)
Title: 'fxl' Single Case Design Charting Package
Description: The 'fxl' Charting package is used to prepare and design single case design figures that are typically prepared in spreadsheet software. With 'fxl', there is no need to leave the R environment to prepare these works and many of the more unique conventions in single case experimental designs can be performed without the need for physically constructing features of plots (e.g., drawing annotations across plots). Support is provided for various different plotting arrangements (e.g., multiple baseline), annotations (e.g., brackets, arrows), and output formats (e.g., svg, rasters).
Author: Shawn Gilroy [aut, cre, cph]
Maintainer: Shawn Gilroy <sgilroy1@lsu.edu>
Diff between fxl versions 1.7.0 dated 2024-06-02 and 1.7.1 dated 2024-06-05
fxl-1.7.0/fxl/R/element-image-draw.R |only fxl-1.7.0/fxl/R/element-image.R |only fxl-1.7.0/fxl/demo/atd_example_fun.R |only fxl-1.7.0/fxl/demo/concurrentplot_fun.R |only fxl-1.7.0/fxl/man/draw_images.Rd |only fxl-1.7.0/fxl/man/scr_images.Rd |only fxl-1.7.0/fxl/tests/testthat/dragon-cairo.ps.xml |only fxl-1.7.0/fxl/tests/testthat/scorpion-cairo.ps.xml |only fxl-1.7.0/fxl/tests/testthat/skinner-cairo.ps.xml |only fxl-1.7.0/fxl/tests/testthat/test-demo-image-draws.R |only fxl-1.7.1/fxl/DESCRIPTION | 8 +- fxl-1.7.1/fxl/MD5 | 57 +++++++----------- fxl-1.7.1/fxl/NAMESPACE | 5 - fxl-1.7.1/fxl/R/data.R | 2 fxl-1.7.1/fxl/R/element-anno-arrows.R | 2 fxl-1.7.1/fxl/R/element-anno-brackets.R | 2 fxl-1.7.1/fxl/R/element-anno-guide-line.R | 2 fxl-1.7.1/fxl/R/element-anno-rect.R | 1 fxl-1.7.1/fxl/R/element-axis-y.R | 1 fxl-1.7.1/fxl/R/element-criterion-line.R | 1 fxl-1.7.1/fxl/R/element-line-cumsum-line.R | 1 fxl-1.7.1/fxl/R/element-line.R | 1 fxl-1.7.1/fxl/R/element-phasechange-single.R | 1 fxl-1.7.1/fxl/R/element-point-cumsum-point.R | 1 fxl-1.7.1/fxl/R/element-support-bar-draw.R | 7 +- fxl-1.7.1/fxl/R/element-support-bar.R | 13 ++-- fxl-1.7.1/fxl/R/fxl-print.R | 14 ++-- fxl-1.7.1/fxl/R/fxl.R | 16 ++--- fxl-1.7.1/fxl/README.md | 60 ++++--------------- fxl-1.7.1/fxl/demo/00Index | 2 fxl-1.7.1/fxl/inst/doc/fxl.html | 20 +++--- fxl-1.7.1/fxl/man/LozyEtAl2020.Rd | 2 fxl-1.7.1/fxl/man/scr_bar_support.Rd | 5 + fxl-1.7.1/fxl/man/scr_plot.Rd | 16 ++--- fxl-1.7.1/fxl/tests/testthat/Rplots.pdf |only 35 files changed, 93 insertions(+), 147 deletions(-)
Title: Bayesian Multinomial Logistic Normal Regression
Description: Provides methods for fitting and inspection of Bayesian Multinomial Logistic Normal Models using MAP estimation and Laplace Approximation as developed in Silverman et. Al. (2022) <https://www.jmlr.org/papers/v23/19-882.html>. Key functionality is implemented in C++ for scalability. 'fido' replaces the previous package 'stray'.
Author: Justin Silverman [aut],
Kim Roche [ctb],
Michelle Nixon [ctb, cre]
Maintainer: Michelle Nixon
<pistner@psu.edu>
Diff between fido versions 1.1.0 dated 2024-05-30 and 1.1.1 dated 2024-06-05
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NEWS.md | 4 ++++ configure | 17 +++++++++++++++-- configure.ac | 17 +++++++++++++++-- inst/doc/mitigating-pcrbias.html | 6 +++--- inst/doc/non-linear-models.html | 4 ++-- inst/doc/orthus.html | 2 +- tests/testthat/Rplots.pdf |binary 9 files changed, 52 insertions(+), 22 deletions(-)
Title: Automatic Structural Time Series Models
Description: Automatic model selection for structural time series decomposition into trend, cycle, and seasonal components, plus optionality for structural interpolation, using the Kalman filter.
Koopman, Siem Jan and Marius Ooms (2012) "Forecasting Economic Time Series Using Unobserved Components Time Series Models" <doi:10.1093/oxfordhb/9780195398649.013.0006>.
Kim, Chang-Jin and Charles R. Nelson (1999) "State-Space Models with Regime Switching: Classical and Gibbs-Sampling Approaches with Applications" <doi:10.7551/mitpress/6444.001.0001><http://econ.korea.ac.kr/~cjkim/>.
Author: Alex Hubbard [aut, cre]
Maintainer: Alex Hubbard <hubbard.alex@gmail.com>
Diff between autostsm versions 3.1.4 dated 2024-03-08 and 3.1.5 dated 2024-06-05
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- NEWS.md | 6 ++++++ R/stsm_estimate.R | 7 ++++++- 4 files changed, 20 insertions(+), 9 deletions(-)
Title: eXtensible Time Series
Description: Provide for uniform handling of R's different time-based data classes by extending zoo, maximizing native format information preservation and allowing for user level customization and extension, while simplifying cross-class interoperability.
Author: Jeffrey A. Ryan [aut, cph],
Joshua M. Ulrich [cre, aut],
Ross Bennett [ctb],
Corwin Joy [ctb]
Maintainer: Joshua M. Ulrich <josh.m.ulrich@gmail.com>
Diff between xts versions 0.13.2 dated 2024-01-21 and 0.14.0 dated 2024-06-05
xts-0.13.2/xts/NEWS |only xts-0.13.2/xts/R/fillIndex.R |only xts-0.13.2/xts/R/sort.xts.R |only xts-0.13.2/xts/R/write.xts.R |only xts-0.13.2/xts/R/xtsible.R |only xts-0.13.2/xts/man/as.environment.Rd |only xts-0.13.2/xts/man/as.xts.methods.Rd |only xts-0.13.2/xts/man/diff.Rd |only xts-0.13.2/xts/man/index.Rd |only xts-0.13.2/xts/man/merge.Rd |only xts-0.13.2/xts/man/period.max.Rd |only xts-0.13.2/xts/man/period.min.Rd |only xts-0.13.2/xts/man/period.prod.Rd |only xts-0.13.2/xts/man/period.sum.Rd |only xts-0.13.2/xts/man/print.Rd |only xts-0.13.2/xts/man/split.Rd |only xts-0.14.0/xts/DESCRIPTION | 7 xts-0.14.0/xts/MD5 | 230 ++--- xts-0.14.0/xts/NAMESPACE | 13 xts-0.14.0/xts/NEWS.md |only xts-0.14.0/xts/R/Date.R | 3 xts-0.14.0/xts/R/Math.xts.R | 4 xts-0.14.0/xts/R/OHLC.R | 2 xts-0.14.0/xts/R/Ops.xts.R | 2 xts-0.14.0/xts/R/POSIX.R | 3 xts-0.14.0/xts/R/adj.time.R | 1 xts-0.14.0/xts/R/align.time.R | 85 + xts-0.14.0/xts/R/as.environment.xts.R | 31 xts-0.14.0/xts/R/as.numeric.R | 2 xts-0.14.0/xts/R/axTicksByTime.R | 44 xts-0.14.0/xts/R/bind.R | 104 +- xts-0.14.0/xts/R/coredata.xts.R | 86 + xts-0.14.0/xts/R/data.frame.R | 3 xts-0.14.0/xts/R/dimnames.R | 39 xts-0.14.0/xts/R/endpoints.R | 75 + xts-0.14.0/xts/R/first.R | 63 + xts-0.14.0/xts/R/index.R | 221 ++++ xts-0.14.0/xts/R/irts.R | 5 xts-0.14.0/xts/R/isOrdered.R | 34 xts-0.14.0/xts/R/lag.xts.R | 104 +- xts-0.14.0/xts/R/last.R | 5 xts-0.14.0/xts/R/list.R | 2 xts-0.14.0/xts/R/matrix.R | 3 xts-0.14.0/xts/R/merge.R | 97 ++ xts-0.14.0/xts/R/modify.args.R | 13 xts-0.14.0/xts/R/na.R | 39 xts-0.14.0/xts/R/nperiods.R | 52 + xts-0.14.0/xts/R/origin.fix.R | 17 xts-0.14.0/xts/R/parse8601.R | 87 + xts-0.14.0/xts/R/period.R | 90 +- xts-0.14.0/xts/R/period.apply.R | 141 ++- xts-0.14.0/xts/R/periodicity.R | 96 +- xts-0.14.0/xts/R/plot.R | 304 ++++++ xts-0.14.0/xts/R/print.R | 31 xts-0.14.0/xts/R/reclass.R |only xts-0.14.0/xts/R/rollapply.xts.R | 15 xts-0.14.0/xts/R/split.R | 41 xts-0.14.0/xts/R/start.R | 2 xts-0.14.0/xts/R/startOfYear.R | 2 xts-0.14.0/xts/R/str.R | 2 xts-0.14.0/xts/R/tclass.R | 71 + xts-0.14.0/xts/R/tformat.R | 48 + xts-0.14.0/xts/R/timeBasedRange.R | 3 xts-0.14.0/xts/R/timeBasedSeq.R | 70 + xts-0.14.0/xts/R/timeDate.R | 3 xts-0.14.0/xts/R/timeSeries.R | 5 xts-0.14.0/xts/R/toperiod.R | 139 ++- xts-0.14.0/xts/R/ts.R | 17 xts-0.14.0/xts/R/tzone.R | 74 + xts-0.14.0/xts/R/utils.R | 2 xts-0.14.0/xts/R/xts-package.R |only xts-0.14.0/xts/R/xts.R | 278 ++++-- xts-0.14.0/xts/R/xts.methods.R | 225 ++++- xts-0.14.0/xts/R/yearmon.R | 4 xts-0.14.0/xts/R/zoo.R | 11 xts-0.14.0/xts/R/zzz.R | 8 xts-0.14.0/xts/README.md |only xts-0.14.0/xts/build/vignette.rds |binary xts-0.14.0/xts/inst/doc/xts-faq.pdf |binary xts-0.14.0/xts/inst/doc/xts.pdf |binary xts-0.14.0/xts/inst/tinytest/test-merge.R | 1 xts-0.14.0/xts/inst/tinytest/test-subset.R | 11 xts-0.14.0/xts/man/CLASS.Rd | 46 - xts-0.14.0/xts/man/addEventLines.Rd | 38 xts-0.14.0/xts/man/addLegend.Rd | 38 xts-0.14.0/xts/man/addPanel.Rd | 60 - xts-0.14.0/xts/man/addPolygon.Rd | 44 xts-0.14.0/xts/man/addSeries.Rd | 34 xts-0.14.0/xts/man/align.time.Rd | 76 - xts-0.14.0/xts/man/apply.monthly.Rd | 95 +- xts-0.14.0/xts/man/as.environment.xts.Rd |only xts-0.14.0/xts/man/as.xts.Rd | 193 ++-- xts-0.14.0/xts/man/axTicksByTime.Rd | 91 +- xts-0.14.0/xts/man/coredata.xts.Rd | 83 + xts-0.14.0/xts/man/diff.xts.Rd |only xts-0.14.0/xts/man/dimnames.xts.Rd | 78 - xts-0.14.0/xts/man/endpoints.Rd | 47 - xts-0.14.0/xts/man/first.Rd | 122 +- xts-0.14.0/xts/man/firstof.Rd | 60 - xts-0.14.0/xts/man/index.xts.Rd |only xts-0.14.0/xts/man/isOrdered.Rd | 42 xts-0.14.0/xts/man/make.index.unique.Rd | 96 -- xts-0.14.0/xts/man/merge.xts.Rd |only xts-0.14.0/xts/man/na.locf.xts.Rd | 76 - xts-0.14.0/xts/man/ndays.Rd | 57 - xts-0.14.0/xts/man/parseISO8601.Rd | 123 +- xts-0.14.0/xts/man/period.apply.Rd | 93 +- xts-0.14.0/xts/man/period_math.Rd |only xts-0.14.0/xts/man/periodicity.Rd | 93 +- xts-0.14.0/xts/man/plot.xts.Rd | 222 ++-- xts-0.14.0/xts/man/print.xts.Rd |only xts-0.14.0/xts/man/rbind.xts.Rd | 84 - xts-0.14.0/xts/man/reclass.Rd |only xts-0.14.0/xts/man/sample.data.Rd | 30 xts-0.14.0/xts/man/split.xts.Rd |only xts-0.14.0/xts/man/subset.xts.Rd | 169 +-- xts-0.14.0/xts/man/tclass.Rd | 111 +- xts-0.14.0/xts/man/tformat.Rd | 86 + xts-0.14.0/xts/man/timeBased.Rd | 35 xts-0.14.0/xts/man/timeBasedSeq.Rd | 152 +-- xts-0.14.0/xts/man/to.period.Rd | 224 ++-- xts-0.14.0/xts/man/tzone.Rd | 93 -- xts-0.14.0/xts/man/window.xts.Rd | 92 -- xts-0.14.0/xts/man/xts-internals.Rd | 110 +- xts-0.14.0/xts/man/xts-package.Rd | 35 xts-0.14.0/xts/man/xts.Rd | 240 ++--- xts-0.14.0/xts/man/xtsAPI.Rd | 31 xts-0.14.0/xts/man/xtsAttributes.Rd | 54 - xts-0.14.0/xts/src/extract_col.c | 8 xts-0.14.0/xts/src/merge.c | 1300 +++++++++-------------------- 130 files changed, 4836 insertions(+), 3095 deletions(-)
More information about epiworldRShiny at CRAN
Permanent link
Title: Dimension Reduction, Regression and Discrimination for
Chemometrics
Description: Data exploration and prediction with focus on high dimensional data and chemometrics.
The package was initially designed about partial least squares regression and discrimination models and variants, in particular locally weighted PLS models (LWPLS). Then, it has been expanded to many other methods for analyzing high dimensional data.
The name 'rchemo' comes from the fact that the package is orientated to chemometrics, but most of the provided methods are fully generic to other domains.
Functions such as transform(), predict(), coef() and summary() are available. Tuning the predictive models is facilitated by generic functions gridscore() (validation dataset) and gridcv() (cross-validation). Faster versions are also available for models based on latent variables (LVs) (gridscorelv() and gridcvlv()) and ridge regularization (gridscorelb() and gridcvlb()).
Author: Marion Brandolini-Bunlon [aut, cre],
Benoit Jaillais [aut],
Jean-Michel Roger [aut],
Matthieu Lesnoff [aut]
Maintainer: Marion Brandolini-Bunlon <marion.brandolini-bunlon@inrae.fr>
Diff between rchemo versions 0.1-1 dated 2023-05-12 and 0.1-2 dated 2024-06-05
DESCRIPTION | 6 +- MD5 | 71 ++++++++++++++++++----------- NAMESPACE | 15 ++++++ R/gridcv.R | 33 ++++++++++++- R/gridscore.R | 78 +++++++++++++++++++++----------- R/mbplsprobda.R |only R/mbplsr.R |only R/mbplsrda.R |only R/onAttach.r | 2 R/orthog.R |only R/plotjit.R | 2 R/plotscore.R | 2 R/plotxy.R | 2 R/plskern.R | 96 +++++++++++++++++++++++++--------------- R/plsnipals.R | 21 ++++++-- R/plsprobda.R | 12 ++--- R/plsrannar.R | 24 +++++++--- R/plsrda.R | 4 - R/selwold.R | 2 R/soplsprobda.R |only R/soplsprobdacv.R |only R/soplsr.R |only R/soplsrcv.R |only R/soplsrda.R |only R/soplsrdacv.R |only R/vip.R |only R/zfunctions.R | 62 +++++++++++++++++++++++++ README.md | 9 ++- inst/NEWS.md | 5 ++ inst/rchemo_functions_github.md | 22 +++++++-- man/aicplsr.Rd | 2 man/blocks.Rd | 6 -- man/gridcv.Rd | 2 man/knnda.Rd | 2 man/knnr.Rd | 2 man/mbplsda.Rd |only man/mbplsr.Rd |only man/orthog.Rd |only man/plsda.Rd | 23 ++++++--- man/plsda_agg.Rd | 2 man/plsr.Rd | 26 ++++++++-- man/soplsda.Rd |only man/soplsr.Rd |only man/vip.Rd |only man/xfit.Rd | 4 - 45 files changed, 383 insertions(+), 154 deletions(-)
Title: Risk-Based Control Charts
Description: Univariate and multivariate versions of risk-based control charts. Univariate versions of control charts, such as the risk-based version of X-bar, Moving Average (MA), Exponentially Weighted Moving Average Control Charts (EWMA), and Cumulative Sum Control Charts (CUSUM) charts. The risk-based version of the multivariate T2 control chart. Plot and summary functions. Kosztyan et. al. (2016) <doi:10.1016/j.eswa.2016.06.019>.
Author: Aamir Saghir [aut],
Attila Imre Katona [aut],
Zsolt Tibor Kosztyan [aut, cre]
Maintainer: Zsolt Tibor Kosztyan <kosztyan.zsolt@gtk.uni-pannon.hu>
Diff between rbcc versions 0.1.0 dated 2023-07-08 and 0.1.1 dated 2024-06-05
DESCRIPTION | 8 +- MD5 | 11 +- R/data_gen.R | 58 +++++++------- R/plot.rbcc.R | 206 ++++++++++++++++++++++++++-------------------------- R/rbcc_opt.R | 2 README.md | 4 + man/rbcc-package.Rd |only 7 files changed, 147 insertions(+), 142 deletions(-)
Title: NHDPlus Tools
Description: Tools for traversing and working with National Hydrography Dataset Plus (NHDPlus) data. All methods implemented in 'nhdplusTools' are available in the NHDPlus documentation available from the US Environmental Protection Agency <https://www.epa.gov/waterdata/basic-information>.
Author: David Blodgett [aut, cre] ,
Mike Johnson [aut] ,
Marc Weber [ctb] ,
Josh Erickson [ctb],
Lauren Koenig [ctb]
Maintainer: David Blodgett <dblodgett@usgs.gov>
Diff between nhdplusTools versions 1.2.0 dated 2024-05-28 and 1.2.1 dated 2024-06-05
DESCRIPTION | 6 MD5 | 16 NEWS.md | 4 R/A_nhdplusTools.R | 1022 ++++++++++++++++++++++----------------------- R/arcrest_tools.R | 438 +++++++++---------- R/geoserver_tools.R | 6 R/get_geoconnex.R | 2 R/get_nldi.R | 4 inst/doc/nhdplusTools.html | 48 -- 9 files changed, 773 insertions(+), 773 deletions(-)
Title: Fast Tidy Tools for Date and Date-Time Manipulation
Description: A set of fast tidy functions for wrangling, completing and
summarising date and date-time data. It combines 'tidyverse' syntax
with the efficiency of 'data.table' and speed of 'collapse'.
Author: Nick Christofides [aut, cre]
Maintainer: Nick Christofides <nick.christofides.r@gmail.com>
Diff between timeplyr versions 0.8.0 dated 2024-05-22 and 0.8.1 dated 2024-06-05
timeplyr-0.8.0/timeplyr/R/weighted_mean.R |only timeplyr-0.8.1/timeplyr/DESCRIPTION | 12 +-- timeplyr-0.8.1/timeplyr/MD5 | 70 +++++++++--------- timeplyr-0.8.1/timeplyr/NAMESPACE | 12 +++ timeplyr-0.8.1/timeplyr/NEWS.md | 8 ++ timeplyr-0.8.1/timeplyr/R/GRP_utils.R | 5 + timeplyr-0.8.1/timeplyr/R/roll.R | 9 +- timeplyr-0.8.1/timeplyr/R/scales.R |only timeplyr-0.8.1/timeplyr/R/time_aggregate.R | 4 - timeplyr-0.8.1/timeplyr/R/time_core.R | 10 +- timeplyr-0.8.1/timeplyr/R/time_count.R | 2 timeplyr-0.8.1/timeplyr/R/time_cut.R | 36 ++++----- timeplyr-0.8.1/timeplyr/R/time_deprecated_functions.R | 6 - timeplyr-0.8.1/timeplyr/R/time_diff.R | 2 timeplyr-0.8.1/timeplyr/R/time_elapsed.R | 2 timeplyr-0.8.1/timeplyr/R/time_expand.R | 6 - timeplyr-0.8.1/timeplyr/R/time_ggplot.R | 4 - timeplyr-0.8.1/timeplyr/R/time_id.R | 8 +- timeplyr-0.8.1/timeplyr/R/time_interval.R | 2 timeplyr-0.8.1/timeplyr/R/time_lag.R | 2 timeplyr-0.8.1/timeplyr/R/time_roll.R | 14 +-- timeplyr-0.8.1/timeplyr/R/time_seq.R | 14 +-- timeplyr-0.8.1/timeplyr/R/time_seq_fill.R | 42 +++++++--- timeplyr-0.8.1/timeplyr/R/time_utils.R | 49 +++--------- timeplyr-0.8.1/timeplyr/R/utils.R | 10 ++ timeplyr-0.8.1/timeplyr/R/year_month.R | 26 ++++-- timeplyr-0.8.1/timeplyr/R/zzz.R | 2 timeplyr-0.8.1/timeplyr/README.md | 14 +-- timeplyr-0.8.1/timeplyr/man/time_aggregate.Rd | 2 timeplyr-0.8.1/timeplyr/man/time_core.Rd | 10 +- timeplyr-0.8.1/timeplyr/man/time_count.Rd | 2 timeplyr-0.8.1/timeplyr/man/time_cut.Rd | 4 - timeplyr-0.8.1/timeplyr/man/time_expand.Rd | 4 - timeplyr-0.8.1/timeplyr/man/time_lag.Rd | 2 timeplyr-0.8.1/timeplyr/man/time_roll.Rd | 12 +-- timeplyr-0.8.1/timeplyr/man/time_seq.Rd | 6 - timeplyr-0.8.1/timeplyr/man/year_month.Rd | 6 + 37 files changed, 231 insertions(+), 188 deletions(-)
Title: 'Matrix-Based Flexible Project Planning'
Description: Matrix-Based Flexible Project Planning. This package models, plans, and schedules flexible, such as agile, extreme, and hybrid project plans. The package contains project planning, scheduling, and risk assessment functions. Kosztyan (2022) <doi:10.1016/j.softx.2022.100973>.
Author: Zsolt T. Kosztyan [aut, cre],
Aamir Sagir [aut]
Maintainer: Zsolt T. Kosztyan <kosztyan.zsolt@gtk.uni-pannon.hu>
Diff between mfpp versions 0.0.5 dated 2023-08-21 and 0.0.7 dated 2024-06-05
DESCRIPTION | 11 - MD5 | 54 +++---- R/generatepdm.r | 4 R/get.structures.R | 258 +++++++++++++++++------------------ R/is.flexible.R | 10 - R/maxscore_PEM.r | 2 R/mfpp.R | 91 ++++++------ R/minscore_PEM.R | 4 R/paretores.R | 4 R/percent.R | 21 +- R/phase1.r | 13 - R/phase2.R | 10 - R/phase3.r | 19 +- R/plot.mfpp.R | 45 +++--- R/summary.mfpp.R | 386 ++++++++++++++++++++++++++--------------------------- R/tpc.r | 9 - R/tpq.r | 4 R/tpr.r | 4 R/tpt.r | 4 R/truncpdm.R | 8 - README.md | 7 inst/NEWS | 8 + man/generatepdm.Rd | 152 ++++++++++---------- man/mfpp.Rd | 2 man/percent.Rd | 196 +++++++++++++------------- man/phase1.Rd | 114 +++++++-------- man/phase2.Rd | 110 +++++++-------- man/phase3.Rd | 109 +++++++------- 28 files changed, 832 insertions(+), 827 deletions(-)
Title: Tools for Two-Dimensional Monte-Carlo Simulations
Description: A complete framework to build and study Two-Dimensional Monte-Carlo simulations, aka Second-Order Monte-Carlo simulations. Also includes various distributions (pert, triangular, Bernoulli, empirical discrete and continuous).
Author: Regis Pouillot [aut, cre],
Marie-Laure Delignette-Muller [ctb],
Jean-Baptiste Denis [ctb],
Yu Chen [ctb],
Arie Havelaar [ctb]
Maintainer: Regis Pouillot <rpouillot@yahoo.fr>
Diff between mc2d versions 0.2.0 dated 2023-07-17 and 0.2.1 dated 2024-06-05
DESCRIPTION | 8 +- MD5 | 16 ++--- R/ggtornado.R | 142 ++++++++++++++++++++++----------------------- R/pert.R | 6 + R/triang.R | 19 +++--- build/vignette.rds |binary inst/NEWS | 14 ++++ inst/doc/docmcEnglish.pdf |binary inst/doc/mc2dLmEnglish.pdf |binary 9 files changed, 113 insertions(+), 92 deletions(-)
Title: Core Functions for Data Quality Assessment
Description: Perform data quality assessment ('DQA') of electronic health
records ('EHR'). Publication: Kapsner et al. (2021)
<doi:10.1055/s-0041-1733847>.
Author: Lorenz A. Kapsner [cre, aut] ,
Jonathan M. Mang [aut] ,
Helene Koester [ctb],
MIRACUM - Medical Informatics in Research and Care in University
Medicine [fnd],
Universitaetsklinikum Erlangen [cph]
Maintainer: Lorenz A. Kapsner <lorenz.kapsner@gmail.com>
Diff between DQAstats versions 0.3.4 dated 2024-04-04 and 0.3.5 dated 2024-06-05
DQAstats-0.3.4/DQAstats/R/create_markdown.R |only DQAstats-0.3.4/DQAstats/inst/demo_data/utilities/RMD/DQA_report.Rmd |only DQAstats-0.3.4/DQAstats/inst/doc/DQAstats2SHIPdataset.Rmd |only DQAstats-0.3.4/DQAstats/tests/testthat/test-etl_checks.R |only DQAstats-0.3.4/DQAstats/vignettes/DQAstats2SHIPdataset.Rmd |only DQAstats-0.3.5/DQAstats/DESCRIPTION | 17 DQAstats-0.3.5/DQAstats/MD5 | 83 DQAstats-0.3.5/DQAstats/NAMESPACE | 3 DQAstats-0.3.5/DQAstats/R/DQA.R | 26 DQAstats-0.3.5/DQAstats/R/calc_cat_stats.R | 234 - DQAstats-0.3.5/DQAstats/R/calc_counts.R | 2 DQAstats-0.3.5/DQAstats/R/calc_description.R | 162 - DQAstats-0.3.5/DQAstats/R/calc_stats.R | 576 ++-- DQAstats-0.3.5/DQAstats/R/completeness.R | 4 DQAstats-0.3.5/DQAstats/R/conformance.R | 12 DQAstats-0.3.5/DQAstats/R/create_pdf_report.R |only DQAstats-0.3.5/DQAstats/R/dataloading.R | 63 DQAstats-0.3.5/DQAstats/R/datamap.R | 4 DQAstats-0.3.5/DQAstats/R/datetime_restrictions.R | 22 DQAstats-0.3.5/DQAstats/R/descriptive_results.R | 8 DQAstats-0.3.5/DQAstats/R/difference_check.R |only DQAstats-0.3.5/DQAstats/R/etl.R | 372 +- DQAstats-0.3.5/DQAstats/R/format_value_conformance_results.R | 482 +-- DQAstats-0.3.5/DQAstats/R/get_key_col.R | 82 DQAstats-0.3.5/DQAstats/R/mdr.R | 26 DQAstats-0.3.5/DQAstats/R/plausibilities.R | 792 ++--- DQAstats-0.3.5/DQAstats/R/plausibility_results.R | 10 DQAstats-0.3.5/DQAstats/R/report.R | 628 ++-- DQAstats-0.3.5/DQAstats/R/test_csv.R | 4 DQAstats-0.3.5/DQAstats/R/time_compare.R |only DQAstats-0.3.5/DQAstats/build/vignette.rds |binary DQAstats-0.3.5/DQAstats/inst/demo_data/dqa_example_data_01.csv | 48 DQAstats-0.3.5/DQAstats/inst/demo_data/dqa_example_data_02.csv | 48 DQAstats-0.3.5/DQAstats/inst/demo_data/utilities/RMD/DQA_report.qmd |only DQAstats-0.3.5/DQAstats/inst/doc/DQAstats2SHIPdataset.R | 92 DQAstats-0.3.5/DQAstats/inst/doc/DQAstats2SHIPdataset.html | 1407 +++------- DQAstats-0.3.5/DQAstats/inst/doc/DQAstats2SHIPdataset.qmd |only DQAstats-0.3.5/DQAstats/man/create_markdown.Rd | 2 DQAstats-0.3.5/DQAstats/man/create_pdf_report.Rd |only DQAstats-0.3.5/DQAstats/man/difference_checks.Rd |only DQAstats-0.3.5/DQAstats/man/time_compare.Rd |only DQAstats-0.3.5/DQAstats/tests/testthat/_snaps/datetime_restrictions.md | 54 DQAstats-0.3.5/DQAstats/tests/testthat/_snaps/render_conformance.md | 22 DQAstats-0.3.5/DQAstats/tests/testthat/_snaps/stats.md |only DQAstats-0.3.5/DQAstats/tests/testthat/test-DQA.R | 127 DQAstats-0.3.5/DQAstats/tests/testthat/test-dataloading.R | 4 DQAstats-0.3.5/DQAstats/tests/testthat/test-etl_and_differences_checks.R |only DQAstats-0.3.5/DQAstats/tests/testthat/test-readme.R | 4 DQAstats-0.3.5/DQAstats/tests/testthat/test-stats.R | 6 DQAstats-0.3.5/DQAstats/tests/testthat/test-time_compare.R |only DQAstats-0.3.5/DQAstats/vignettes/DQAstats2SHIPdataset.qmd |only 51 files changed, 2641 insertions(+), 2785 deletions(-)
Title: Using CF-Compliant Calendars with Climate Projection Data
Description: Support for all calendars as specified in the Climate and Forecast
(CF) Metadata Conventions for climate and forecasting data. The CF Metadata
Conventions is widely used for distributing files with climate observations
or projections, including the Coupled Model Intercomparison Project (CMIP)
data used by climate change scientists and the Intergovernmental Panel on
Climate Change (IPCC). This package specifically allows the user to work
with any of the CF-compliant calendars (many of which are not compliant with
POSIXt). The CF time coordinate is formally defined in the CF Metadata
Conventions document available at <https://cfconventions.org/Data/cf-conventions/cf-conventions-1.11/cf-conventions.html#time-coordinate>.
Author: Patrick Van Laake [aut, cre, cph]
Maintainer: Patrick Van Laake <patrick@vanlaake.net>
Diff between CFtime versions 1.3.0 dated 2024-02-28 and 1.4.0 dated 2024-06-05
CFtime-1.3.0/CFtime/man/CFcomplete.Rd |only CFtime-1.3.0/CFtime/man/CFmonth_days.Rd |only CFtime-1.3.0/CFtime/man/CFproperties.Rd |only CFtime-1.3.0/CFtime/man/CFrange.Rd |only CFtime-1.3.0/CFtime/man/CFsubset.Rd |only CFtime-1.3.0/CFtime/man/CFtimestamp.Rd |only CFtime-1.4.0/CFtime/DESCRIPTION | 13 CFtime-1.4.0/CFtime/MD5 | 88 +- CFtime-1.4.0/CFtime/NAMESPACE | 28 CFtime-1.4.0/CFtime/NEWS.md | 44 + CFtime-1.4.0/CFtime/R/CFbounds.R |only CFtime-1.4.0/CFtime/R/CFdatum.R | 21 CFtime-1.4.0/CFtime/R/CFfactor.R | 216 ++++-- CFtime-1.4.0/CFtime/R/CFformat.R | 87 +- CFtime-1.4.0/CFtime/R/CFparse.R | 38 - CFtime-1.4.0/CFtime/R/CFtime-package.R | 19 CFtime-1.4.0/CFtime/R/CFtime.R | 566 ++++++++++++---- CFtime-1.4.0/CFtime/R/CFutils.R | 12 CFtime-1.4.0/CFtime/R/deprecated.R |only CFtime-1.4.0/CFtime/R/zzz.R | 2 CFtime-1.4.0/CFtime/README.md | 31 CFtime-1.4.0/CFtime/TODO | 13 CFtime-1.4.0/CFtime/build/vignette.rds |binary CFtime-1.4.0/CFtime/inst/doc/CFtime.R | 27 CFtime-1.4.0/CFtime/inst/doc/CFtime.Rmd | 47 - CFtime-1.4.0/CFtime/inst/doc/CFtime.html | 317 +++++--- CFtime-1.4.0/CFtime/inst/doc/Processing.R | 9 CFtime-1.4.0/CFtime/inst/doc/Processing.Rmd | 9 CFtime-1.4.0/CFtime/inst/doc/Processing.html | 243 +++--- CFtime-1.4.0/CFtime/man/CFfactor.Rd | 53 + CFtime-1.4.0/CFtime/man/CFparse.Rd | 17 CFtime-1.4.0/CFtime/man/CFtime-class.Rd | 9 CFtime-1.4.0/CFtime/man/CFtime-package.Rd | 22 CFtime-1.4.0/CFtime/man/CFtime.Rd | 6 CFtime-1.4.0/CFtime/man/as.character-CFtime-method.Rd |only CFtime-1.4.0/CFtime/man/as_timestamp.Rd |only CFtime-1.4.0/CFtime/man/bounds.Rd |only CFtime-1.4.0/CFtime/man/cut-CFtime-method.Rd |only CFtime-1.4.0/CFtime/man/deprecated_functions.Rd |only CFtime-1.4.0/CFtime/man/format-CFtime-method.Rd |only CFtime-1.4.0/CFtime/man/indexOf-ANY-CFtime-method.Rd |only CFtime-1.4.0/CFtime/man/is_complete.Rd |only CFtime-1.4.0/CFtime/man/length-CFtime-method.Rd |only CFtime-1.4.0/CFtime/man/month_days.Rd |only CFtime-1.4.0/CFtime/man/plus-CFtime-CFtime-method.Rd | 4 CFtime-1.4.0/CFtime/man/plus-CFtime-numeric-method.Rd | 11 CFtime-1.4.0/CFtime/man/properties.Rd |only CFtime-1.4.0/CFtime/man/range-CFtime-method.Rd |only CFtime-1.4.0/CFtime/man/slab.Rd |only CFtime-1.4.0/CFtime/tests/testthat/test-CFbounds.R |only CFtime-1.4.0/CFtime/tests/testthat/test-CFformat.R | 93 ++ CFtime-1.4.0/CFtime/tests/testthat/test-CFtime.R | 93 +- CFtime-1.4.0/CFtime/tests/testthat/test-functions.R | 22 CFtime-1.4.0/CFtime/tests/testthat/test-parse_deparse.R | 12 CFtime-1.4.0/CFtime/vignettes/CFtime.Rmd | 47 - CFtime-1.4.0/CFtime/vignettes/Processing.Rmd | 9 56 files changed, 1500 insertions(+), 728 deletions(-)
Title: Interface to 'Zenodo' REST API
Description: Provides an Interface to 'Zenodo' (<https://zenodo.org>) REST API,
including management of depositions, attribution of DOIs by 'Zenodo' and
upload and download of files.
Author: Emmanuel Blondel [aut, cre] ,
Julien Barde [ctb] ,
Stephen Eglen [ctb] ,
Hans Van Calster [ctb] ,
Floris Vanderhaeghe [ctb] ,
Jemma Stachelek [ctb]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between zen4R versions 0.9 dated 2023-09-20 and 0.10 dated 2024-06-05
zen4R-0.10/zen4R/DESCRIPTION | 13 zen4R-0.10/zen4R/MD5 | 64 zen4R-0.10/zen4R/NAMESPACE | 2 zen4R-0.10/zen4R/NEWS.md | 34 zen4R-0.10/zen4R/R/ZenodoManager.R | 1893 ++++++++++++--- zen4R-0.10/zen4R/R/ZenodoRecord.R | 1379 +++++++--- zen4R-0.10/zen4R/R/ZenodoRequest.R | 52 zen4R-0.10/zen4R/R/zen4R.R | 7 zen4R-0.10/zen4R/R/zen4R_downloader.R | 5 zen4R-0.10/zen4R/R/zen4R_exporter.R | 5 zen4R-0.10/zen4R/R/zen4R_getter.R | 9 zen4R-0.10/zen4R/R/zen4R_licenses.R | 5 zen4R-0.10/zen4R/R/zen4R_versioning.R | 5 zen4R-0.10/zen4R/README.md | 15 zen4R-0.10/zen4R/build/vignette.rds |binary zen4R-0.10/zen4R/inst/doc/zen4R.Rmd | 230 + zen4R-0.10/zen4R/inst/doc/zen4R.html | 417 ++- zen4R-0.10/zen4R/man/ZenodoManager.Rd | 2523 ++++++++++++-------- zen4R-0.10/zen4R/man/ZenodoRecord.Rd | 1003 +++++-- zen4R-0.10/zen4R/man/ZenodoRequest.Rd | 3 zen4R-0.10/zen4R/man/download_zenodo.Rd | 3 zen4R-0.10/zen4R/man/export_zenodo.Rd | 11 zen4R-0.10/zen4R/man/get_licenses.Rd | 4 zen4R-0.10/zen4R/man/get_versions.Rd | 4 zen4R-0.10/zen4R/man/get_zenodo.Rd | 4 zen4R-0.10/zen4R/man/zen4R.Rd | 8 zen4R-0.10/zen4R/tests/testthat/test_affiliations.R |only zen4R-0.10/zen4R/tests/testthat/test_awards.R |only zen4R-0.10/zen4R/tests/testthat/test_communities.R | 24 zen4R-0.10/zen4R/tests/testthat/test_funders.R | 4 zen4R-0.10/zen4R/tests/testthat/test_languages.R |only zen4R-0.10/zen4R/tests/testthat/test_licenses.R | 4 zen4R-0.10/zen4R/tests/testthat/test_records.R | 264 +- zen4R-0.10/zen4R/vignettes/zen4R.Rmd | 230 + zen4R-0.9/zen4R/tests/testthat/test_grants.R |only 35 files changed, 5723 insertions(+), 2501 deletions(-)
Title: Nonparametric Estimation of the Yield Curve Evolution
Description: Nonparametric estimation of discount functions and yield curves from
transaction data of coupon paying bonds.
Koo, B., La Vecchia, D., & Linton, O. B. (2021) <doi:10.1016/j.jeconom.2020.04.014>
describe an application of this package using the Center for Research in
Security Prices (CRSP) Bond Data and document its implementation.
Author: Bonsoo Koo [aut],
Nathaniel Tomasetti [ctb],
Kai-Yang Goh [ctb],
Yangzhuoran Fin Yang [aut, cre]
Maintainer: Yangzhuoran Fin Yang <yangyangzhuoran@gmail.com>
Diff between ycevo versions 0.2.0 dated 2024-05-01 and 0.2.1 dated 2024-06-05
DESCRIPTION | 6 +- MD5 | 32 +++++------ NEWS.md | 6 ++ R/assertion.R | 39 +++++++++---- R/augment.R | 8 +- R/autoplot.R | 4 + R/epa.R | 14 ++++ R/estimation.R | 107 +++++++++++++++----------------------- R/preparation.R | 52 +++--------------- R/simulation.R | 20 +++++++ R/util.R | 19 +++--- R/ycevo.R | 26 ++------- README.md | 4 - man/generate_yield.Rd | 2 man/ycevo.Rd | 6 +- tests/testthat/test-estimation.R | 36 ++++-------- tests/testthat/test-preparation.R | 96 +--------------------------------- 17 files changed, 188 insertions(+), 289 deletions(-)
Title: Create, Modify and Analyse Phylogenetic Trees
Description: Efficient implementations of functions for the creation,
modification and analysis of phylogenetic trees.
Applications include:
generation of trees with specified shapes;
tree rearrangement;
analysis of tree shape;
rooting of trees and extraction of subtrees;
calculation and depiction of split support;
plotting the position of rogue taxa (Klopfstein & Spasojevic 2019)
<doi:10.1371/journal.pone.0212942>;
calculation of ancestor-descendant relationships,
of 'stemwardness' (Asher & Smith, 2022) <doi:10.1093/sysbio/syab072>,
and of tree balance (Mir et al. 2013) <doi:10.1016/j.mbs.2012.10.005>;
artificial extinction (Asher & Smith, 2022) <doi:10.1093/sysbio/syab072>;
import and export of trees from Newick, Nexus (Maddison et al. 1997)
<doi:10.1093/sysbio/46.4.590>,
and TNT <https://www.lillo.org.ar/phylogeny/tnt/> formats;
and analysis of splits and cladistic information.
Author: Martin R. Smith [aut, cre, cph]
,
Emmanuel Paradis [cph]
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>
Diff between TreeTools versions 1.10.0 dated 2023-08-18 and 1.11.0 dated 2024-06-05
TreeTools-1.10.0/TreeTools/src/TreeTools-init.c |only TreeTools-1.11.0/TreeTools/DESCRIPTION | 8 TreeTools-1.11.0/TreeTools/MD5 | 206 ++++----- TreeTools-1.11.0/TreeTools/NAMESPACE | 16 TreeTools-1.11.0/TreeTools/NEWS.md | 24 + TreeTools-1.11.0/TreeTools/R/AddTip.R | 61 ++ TreeTools-1.11.0/TreeTools/R/ClusterTable.R | 2 TreeTools-1.11.0/TreeTools/R/DropTip.R | 16 TreeTools-1.11.0/TreeTools/R/ImposeConstraint.R | 11 TreeTools-1.11.0/TreeTools/R/Information.R | 7 TreeTools-1.11.0/TreeTools/R/MatchNodes.R |only TreeTools-1.11.0/TreeTools/R/RcppExports-manual.R | 25 - TreeTools-1.11.0/TreeTools/R/RcppExports.R | 16 TreeTools-1.11.0/TreeTools/R/ReadTntTree.R | 10 TreeTools-1.11.0/TreeTools/R/RoguePlot.R | 54 +- TreeTools-1.11.0/TreeTools/R/SplitFunctions.R | 109 ++-- TreeTools-1.11.0/TreeTools/R/Splits.R | 5 TreeTools-1.11.0/TreeTools/R/Support.R | 3 TreeTools-1.11.0/TreeTools/R/TipTimedTree.R | 4 TreeTools-1.11.0/TreeTools/R/mst.R | 2 TreeTools-1.11.0/TreeTools/R/parse_files.R | 21 TreeTools-1.11.0/TreeTools/R/phylo.R | 39 + TreeTools-1.11.0/TreeTools/R/tree_ancestors.R |only TreeTools-1.11.0/TreeTools/R/tree_descendants.R |only TreeTools-1.11.0/TreeTools/R/tree_display.R | 2 TreeTools-1.11.0/TreeTools/R/tree_generation.R | 90 +++ TreeTools-1.11.0/TreeTools/R/tree_numbering.R | 26 - TreeTools-1.11.0/TreeTools/R/tree_properties.R | 209 --------- TreeTools-1.11.0/TreeTools/R/tree_rearrangement.R | 22 TreeTools-1.11.0/TreeTools/build/partial.rdb |binary TreeTools-1.11.0/TreeTools/inst/REFERENCES.bib | 11 TreeTools-1.11.0/TreeTools/inst/doc/filesystem-navigation.html | 133 ++--- TreeTools-1.11.0/TreeTools/inst/doc/load-data.html | 227 +++++----- TreeTools-1.11.0/TreeTools/inst/doc/load-trees.html | 139 +++--- TreeTools-1.11.0/TreeTools/inst/include/TreeTools/SplitList.h | 12 TreeTools-1.11.0/TreeTools/inst/include/TreeTools/renumber_tree.h | 2 TreeTools-1.11.0/TreeTools/inst/include/TreeTools/root_tree.h | 20 TreeTools-1.11.0/TreeTools/man/AddTip.Rd | 42 + TreeTools-1.11.0/TreeTools/man/AncestorEdge.Rd | 4 TreeTools-1.11.0/TreeTools/man/CharacterInformation.Rd | 8 TreeTools-1.11.0/TreeTools/man/CladeSizes.Rd | 2 TreeTools-1.11.0/TreeTools/man/CollapseNode.Rd | 2 TreeTools-1.11.0/TreeTools/man/ConsensusWithout.Rd | 4 TreeTools-1.11.0/TreeTools/man/DescendantEdges.Rd | 47 +- TreeTools-1.11.0/TreeTools/man/DropTip.Rd | 10 TreeTools-1.11.0/TreeTools/man/EdgeAncestry.Rd | 4 TreeTools-1.11.0/TreeTools/man/EdgeDistances.Rd | 2 TreeTools-1.11.0/TreeTools/man/EnforceOutgroup.Rd | 10 TreeTools-1.11.0/TreeTools/man/GenerateTree.Rd | 20 TreeTools-1.11.0/TreeTools/man/ImposeConstraint.Rd | 2 TreeTools-1.11.0/TreeTools/man/KeptPaths.Rd | 2 TreeTools-1.11.0/TreeTools/man/KeptVerts.Rd | 2 TreeTools-1.11.0/TreeTools/man/LabelSplits.Rd | 2 TreeTools-1.11.0/TreeTools/man/LeafLabelInterchange.Rd | 2 TreeTools-1.11.0/TreeTools/man/ListAncestors.Rd | 4 TreeTools-1.11.0/TreeTools/man/MRCA.Rd | 4 TreeTools-1.11.0/TreeTools/man/MakeTreeBinary.Rd | 2 TreeTools-1.11.0/TreeTools/man/MatchEdges.Rd |only TreeTools-1.11.0/TreeTools/man/NDescendants.Rd | 4 TreeTools-1.11.0/TreeTools/man/NSplits.Rd | 4 TreeTools-1.11.0/TreeTools/man/NTip.Rd | 4 TreeTools-1.11.0/TreeTools/man/NodeDepth.Rd | 2 TreeTools-1.11.0/TreeTools/man/NodeNumbers.Rd |only TreeTools-1.11.0/TreeTools/man/NodeOrder.Rd | 2 TreeTools-1.11.0/TreeTools/man/PathLengths.Rd | 2 TreeTools-1.11.0/TreeTools/man/PolarizeSplits.Rd | 2 TreeTools-1.11.0/TreeTools/man/ReadCharacters.Rd | 2 TreeTools-1.11.0/TreeTools/man/ReadTntTree.Rd | 2 TreeTools-1.11.0/TreeTools/man/RenumberTips.Rd | 2 TreeTools-1.11.0/TreeTools/man/Reorder.Rd | 5 TreeTools-1.11.0/TreeTools/man/RoguePlot.Rd | 18 TreeTools-1.11.0/TreeTools/man/RootNode.Rd | 2 TreeTools-1.11.0/TreeTools/man/RootTree.Rd | 8 TreeTools-1.11.0/TreeTools/man/SortTree.Rd | 2 TreeTools-1.11.0/TreeTools/man/SplitFrequency.Rd | 2 TreeTools-1.11.0/TreeTools/man/SplitsInBinaryTree.Rd | 2 TreeTools-1.11.0/TreeTools/man/Subtree.Rd | 2 TreeTools-1.11.0/TreeTools/man/TipLabels.Rd | 37 - TreeTools-1.11.0/TreeTools/man/TipTimedTree.Rd | 2 TreeTools-1.11.0/TreeTools/man/TipsInSplits.Rd | 2 TreeTools-1.11.0/TreeTools/man/TreeIsRooted.Rd | 2 TreeTools-1.11.0/TreeTools/man/TrivialTree.Rd | 2 TreeTools-1.11.0/TreeTools/man/match.Splits.Rd | 2 TreeTools-1.11.0/TreeTools/man/root_on_node.Rd |only TreeTools-1.11.0/TreeTools/man/xor.Rd | 2 TreeTools-1.11.0/TreeTools/src/RcppExports.cpp | 107 ++++ TreeTools-1.11.0/TreeTools/src/ape_reorder.cpp |only TreeTools-1.11.0/TreeTools/src/ape_reorder.h | 37 - TreeTools-1.11.0/TreeTools/src/descendant_edges.cpp |only TreeTools-1.11.0/TreeTools/tests/testthat/_snaps/RoguePlot/rogueplot-poly.svg | 6 TreeTools-1.11.0/TreeTools/tests/testthat/_snaps/RoguePlot/rogueplot-simple.svg | 8 TreeTools-1.11.0/TreeTools/tests/testthat/_snaps/RoguePlot/rogueplot-trees1.svg | 12 TreeTools-1.11.0/TreeTools/tests/testthat/test-AddTip.R | 96 +++- TreeTools-1.11.0/TreeTools/tests/testthat/test-DropTip.R | 8 TreeTools-1.11.0/TreeTools/tests/testthat/test-ImposeConstraint.R | 15 TreeTools-1.11.0/TreeTools/tests/testthat/test-MatchNodes.R |only TreeTools-1.11.0/TreeTools/tests/testthat/test-RoguePlot.R | 39 + TreeTools-1.11.0/TreeTools/tests/testthat/test-SplitFunctions.R | 6 TreeTools-1.11.0/TreeTools/tests/testthat/test-Splits.R | 7 TreeTools-1.11.0/TreeTools/tests/testthat/test-TotalCopheneticIndex.R | 23 + TreeTools-1.11.0/TreeTools/tests/testthat/test-consensus.R | 1 TreeTools-1.11.0/TreeTools/tests/testthat/test-phylo.R | 10 TreeTools-1.11.0/TreeTools/tests/testthat/test-root_tree.h.R | 46 +- TreeTools-1.11.0/TreeTools/tests/testthat/test-tree_ancestors.R |only TreeTools-1.11.0/TreeTools/tests/testthat/test-tree_descendants.R |only TreeTools-1.11.0/TreeTools/tests/testthat/test-tree_display.R | 12 TreeTools-1.11.0/TreeTools/tests/testthat/test-tree_generation.R | 58 ++ TreeTools-1.11.0/TreeTools/tests/testthat/test-tree_numbering.R | 15 TreeTools-1.11.0/TreeTools/tests/testthat/test-tree_properties.R | 41 - TreeTools-1.11.0/TreeTools/tests/testthat/test-tree_rearrange.R | 41 + 110 files changed, 1456 insertions(+), 955 deletions(-)
Title: Survival Analysis
Description: Contains the core survival analysis routines, including
definition of Surv objects,
Kaplan-Meier and Aalen-Johansen (multi-state) curves, Cox models,
and parametric accelerated failure time models.
Author: Terry M Therneau [aut, cre],
Thomas Lumley [ctb, trl] ,
Atkinson Elizabeth [ctb],
Crowson Cynthia [ctb]
Maintainer: Terry M Therneau <therneau.terry@mayo.edu>
Diff between survival versions 3.6-4 dated 2024-04-24 and 3.7-0 dated 2024-06-05
DESCRIPTION | 8 MD5 | 242 ++++++++++---------- NAMESPACE | 4 R/Surv.R | 29 +- R/Surv2.R | 8 R/concordance.R | 2 R/coxph.R | 2 R/predict.coxph.R | 49 ++-- R/print.coxph.R | 1 R/print.summary.coxph.R | 2 R/residuals.survfit.R | 4 R/rsurvpart2.R | 2 R/summary.aareg.R | 4 R/summary.survfit.R |only R/summary.survfitms.R |only R/survfit.coxph.R | 4 R/survfit0.R | 10 R/survfitAJ.R | 2 R/survfitKM.R | 14 - R/survfitms.R | 411 ++--------------------------------- inst/NEWS.Rd | 32 ++ inst/doc/adjcurve.R | 10 inst/doc/adjcurve.Rnw | 10 inst/doc/adjcurve.pdf |binary inst/doc/approximate.pdf |binary inst/doc/compete.R | 12 - inst/doc/compete.Rnw | 12 - inst/doc/compete.pdf |binary inst/doc/concordance.pdf |binary inst/doc/matrix.pdf |binary inst/doc/methods.pdf |binary inst/doc/multi.pdf |binary inst/doc/other.Rnw | 50 +--- inst/doc/other.pdf |binary inst/doc/population.pdf |binary inst/doc/redistribute.pdf |binary inst/doc/splines.pdf |binary inst/doc/survival.R | 4 inst/doc/survival.Rnw | 4 inst/doc/survival.pdf |binary inst/doc/tiedtimes.pdf |binary inst/doc/timedep.pdf |binary inst/doc/validate.pdf |binary man/Survmethods.Rd | 37 +-- man/coxph.object.Rd | 2 man/nafld.Rd | 21 + man/predict.coxph.Rd | 30 +- man/summary.survfit.Rd | 38 ++- man/survfit.formula.Rd | 27 +- man/survfit.object.Rd | 2 man/survfit0.Rd | 24 -- noweb/Makefile | 2 noweb/code.nw |only noweb/concordance.Rnw | 4 noweb/coxph.Rnw | 2 noweb/coxsurv.Rnw | 4 noweb/noweb.sty |only noweb/predict.coxph.Rnw | 49 ++-- src/concordance3.c | 2 src/concordance5.c | 2 src/fastkm.c | 65 ++--- src/init.c | 2 src/survfitaj.c | 2 tests/Examples/survival-Ex.Rout.save | 8 tests/aareg.R | 24 +- tests/aareg.Rout.save | 32 +- tests/bladder.R | 2 tests/bladder.Rout.save | 10 tests/book1.R | 14 - tests/book1.Rout.save | 22 - tests/book2.R | 6 tests/book2.Rout.save | 14 - tests/book3.R | 12 - tests/book3.Rout.save | 20 - tests/book4.R | 10 tests/book4.Rout.save | 18 - tests/book5.R | 16 - tests/book5.Rout.save | 24 +- tests/book6.R | 16 - tests/book6.Rout.save | 24 +- tests/book7.R | 8 tests/book7.Rout.save | 16 - tests/brier.R | 2 tests/brier.Rout.save | 10 tests/cancer.R | 2 tests/cancer.Rout.save | 10 tests/clogit.R | 4 tests/clogit.Rout.save | 12 - tests/concordance.R | 12 - tests/concordance.Rout.save | 20 - tests/concordance2.R | 20 - tests/concordance2.Rout.save | 28 +- tests/concordance3.R | 30 ++ tests/concordance3.Rout.save | 46 +++ tests/counting.R | 6 tests/counting.Rout.save | 16 - tests/coxsurv.R | 8 tests/coxsurv.Rout.save | 16 - tests/coxsurv2.R | 8 tests/coxsurv2.Rout.save | 16 - tests/coxsurv3.R | 14 - tests/coxsurv3.Rout.save | 22 - tests/coxsurv4.R | 6 tests/coxsurv4.Rout.save | 15 - tests/doaml.R | 2 tests/doaml.Rout.save | 10 tests/finegray.R | 4 tests/finegray.Rout.save | 12 - tests/prednew.Rout.save | 8 tests/predsurv.R |only tests/predsurv.Rout.save |only tests/r_sas.R | 2 tests/r_sas.Rout.save | 10 tests/survfit1.R | 6 tests/survfit1.Rout.save | 10 tests/testci2.R | 8 tests/testci2.Rout.save | 12 - tests/turnbull.R | 6 tests/turnbull.Rout.save | 14 - tests/yates1.R | 8 tests/yates1.Rout.save | 16 - vignettes/adjcurve.Rnw | 10 vignettes/compete.Rnw | 12 - vignettes/other.Rnw | 50 +--- vignettes/survival.Rnw | 4 125 files changed, 929 insertions(+), 1141 deletions(-)
Title: Automatic Short Form Creation
Description: Performs automatic creation of short forms of scales with an
ant colony optimization algorithm and a Tabu search. As implemented in the
package, the ant colony algorithm randomly selects items to build a model of
a specified length, then updates the probability of item selection according
to the fit of the best model within each set of searches. The algorithm
continues until the same items are selected by multiple ants a given number
of times in a row. On the other hand, the Tabu search changes one parameter at
a time to be either free, constrained, or fixed while keeping track of the
changes made and putting changes that result in worse fit in a "tabu" list
so that the algorithm does not revisit them for some number of searches.
See Leite, Huang, & Marcoulides (2008) <doi:10.1080/00273170802285743> for
an applied example of the ant colony algorithm, and Marcoulides & Falk (2018)
<doi:10.1080/10705511.2017.1409074> for an applied example of the Tabu search.
Author: Anthony Raborn [aut, cre] ,
Walter Leite [aut]
Maintainer: Anthony Raborn <anthony.w.raborn@gmail.com>
Diff between ShortForm versions 0.5.4 dated 2024-05-22 and 0.5.5 dated 2024-06-05
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS.md | 4 ++++ R/ACO_lavaan.R | 20 ++++++++++---------- R/simulated_annealing_internals.R | 19 ++++++++++--------- tests/testthat/test-simulated_annealing_internals.R | 12 ++++++------ 6 files changed, 39 insertions(+), 34 deletions(-)
Title: Scatter Pie Plot
Description: Creates scatterpie plots, especially useful for plotting pies on a map.
Author: Guangchuang Yu [aut, cre] ,
Shuangbin Xu [ctb]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between scatterpie versions 0.2.2 dated 2024-04-03 and 0.2.3 dated 2024-06-05
DESCRIPTION | 6 +- MD5 | 18 +++--- NAMESPACE | 1 NEWS.md | 4 + R/geom_scatterpie.R | 88 ++++++++++++++++++++++++-------- R/utilities.R | 124 ++++++++++++++++++++++++++++++++++++++++++++++ build/vignette.rds |binary inst/doc/scatterpie.html | 36 ++++++------- man/geom_scatterpie.Rd | 50 ++++++++++++++++++ man/scatterpie-package.Rd | 40 +++++++------- 10 files changed, 293 insertions(+), 74 deletions(-)
Title: A Swiss-Army Knife for Data I/O
Description: Streamlined data import and export by making assumptions that
the user is probably willing to make: 'import()' and 'export()' determine
the data format from the file extension, reasonable defaults are used for
data import and export, web-based import is natively supported (including
from SSL/HTTPS), compressed files can be read directly, and fast import
packages are used where appropriate. An additional convenience function,
'convert()', provides a simple method for converting between file types.
Author: Jason Becker [aut],
Chung-hong Chan [aut, cre] ,
David Schoch [aut] ,
Geoffrey CH Chan [ctb],
Thomas J. Leeper [aut] ,
Christopher Gandrud [ctb],
Andrew MacDonald [ctb],
Ista Zahn [ctb],
Stanislaus Stadlmann [ctb],
Ruaridh Williamson [ctb],
Patrick K [...truncated...]
Maintainer: Chung-hong Chan <chainsawtiney@gmail.com>
Diff between rio versions 1.1.0 dated 2024-05-23 and 1.1.1 dated 2024-06-05
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- NEWS.md | 6 ++++++ R/compression.R | 8 ++++++++ R/import.R | 2 +- inst/doc/labelled.html | 4 ++-- inst/doc/rio.html | 4 ++-- tests/testthat/test_compress.R | 21 +++++++++++++++++++++ 8 files changed, 50 insertions(+), 15 deletions(-)
Title: Percentile-Based Control Chart
Description: Design and implementation of Percentile-based Shewhart Control Charts for continuous data. Faraz (2019) <doi:10.1002/qre.2384>.
Author: Aamir Saghir [aut],
Zsolt T. Kosztyan [aut, cre]
Maintainer: Zsolt T. Kosztyan <kosztyan.zsolt@gtk.uni-pannon.hu>
Diff between pbcc versions 0.0.4 dated 2023-08-20 and 0.0.5 dated 2024-06-05
DESCRIPTION | 8 MD5 | 16 - R/odpbc.R | 674 ++++++++++++++++++++++++++-------------------------- R/pbcc.R | 2 R/plot.pbcc.R | 228 ++++++++--------- R/summary.pbcc.R | 310 +++++++++++------------ README.md | 56 ++-- inst/NEWS | 4 man/pbcc.package.Rd | 2 9 files changed, 655 insertions(+), 645 deletions(-)
Title: Connect to ODBC Compatible Databases (using the DBI Interface)
Description: A DBI-compatible interface to ODBC databases.
Author: Jim Hester [aut],
Hadley Wickham [aut, cre],
Oliver Gjoneski [aut],
lexicalunit [cph] ,
Google Inc. [cph] ,
Posit Software, PBC [cph, fnd]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between odbc versions 1.4.2 dated 2024-01-22 and 1.5.0 dated 2024-06-05
odbc-1.4.2/odbc/R/odbc-data-type.R |only odbc-1.5.0/odbc/DESCRIPTION | 32 - odbc-1.5.0/odbc/MD5 | 147 ++--- odbc-1.5.0/odbc/NAMESPACE | 26 odbc-1.5.0/odbc/NEWS.md | 69 ++ odbc-1.5.0/odbc/R/RcppExports.R | 12 odbc-1.5.0/odbc/R/aaa-odbc-data-type.R |only odbc-1.5.0/odbc/R/connection-pane.R | 75 ++ odbc-1.5.0/odbc/R/dbi-connection.R | 38 - odbc-1.5.0/odbc/R/dbi-driver.R | 33 - odbc-1.5.0/odbc/R/dbi-result.R | 5 odbc-1.5.0/odbc/R/dbi-table.R | 106 +++- odbc-1.5.0/odbc/R/driver-access.R | 42 - odbc-1.5.0/odbc/R/driver-bigquery.R | 39 - odbc-1.5.0/odbc/R/driver-databricks.R | 41 + odbc-1.5.0/odbc/R/driver-db2.R | 3 odbc-1.5.0/odbc/R/driver-hana.R | 3 odbc-1.5.0/odbc/R/driver-hive.R | 37 - odbc-1.5.0/odbc/R/driver-impala.R | 39 - odbc-1.5.0/odbc/R/driver-mysql.R | 41 - odbc-1.5.0/odbc/R/driver-oracle.R | 45 + odbc-1.5.0/odbc/R/driver-postgres.R | 41 - odbc-1.5.0/odbc/R/driver-redshift.R | 41 - odbc-1.5.0/odbc/R/driver-snowflake.R | 340 ++++++++++++- odbc-1.5.0/odbc/R/driver-spark.R | 37 - odbc-1.5.0/odbc/R/driver-sql-server.R | 51 + odbc-1.5.0/odbc/R/driver-sqlite.R | 39 - odbc-1.5.0/odbc/R/driver-teradata.R | 40 - odbc-1.5.0/odbc/R/driver-vertica.R | 41 - odbc-1.5.0/odbc/R/import-standalone-obj-type.R |only odbc-1.5.0/odbc/R/import-standalone-types-check.R |only odbc-1.5.0/odbc/R/odbc-config.R | 4 odbc-1.5.0/odbc/R/odbc-connection.R | 66 ++ odbc-1.5.0/odbc/R/odbc.R | 1 odbc-1.5.0/odbc/R/utils.R | 259 +++++++++ odbc-1.5.0/odbc/README.md | 4 odbc-1.5.0/odbc/inst/doc/benchmarks.html | 2 odbc-1.5.0/odbc/inst/doc/develop.Rmd | 26 odbc-1.5.0/odbc/inst/doc/develop.html | 57 ++ odbc-1.5.0/odbc/inst/doc/setup.Rmd | 21 odbc-1.5.0/odbc/inst/doc/setup.html | 58 ++ odbc-1.5.0/odbc/man/DBI-classes.Rd | 16 odbc-1.5.0/odbc/man/DBI-tables.Rd | 8 odbc-1.5.0/odbc/man/OdbcConnection.Rd | 22 odbc-1.5.0/odbc/man/OdbcResult.Rd | 6 odbc-1.5.0/odbc/man/dbConnect-OdbcDriver-method.Rd | 9 odbc-1.5.0/odbc/man/dbListTables-OdbcConnection-method.Rd | 22 odbc-1.5.0/odbc/man/driver-Snowflake.Rd |only odbc-1.5.0/odbc/man/odbcDataType.Rd | 57 -- odbc-1.5.0/odbc/man/odbcPreviewQuery.Rd | 3 odbc-1.5.0/odbc/man/snowflake.Rd |only odbc-1.5.0/odbc/src/Iconv.cpp | 2 odbc-1.5.0/odbc/src/RcppExports.cpp | 34 - odbc-1.5.0/odbc/src/connection.cpp | 17 odbc-1.5.0/odbc/src/nanodbc/nanodbc.cpp | 12 odbc-1.5.0/odbc/src/odbc_connection.cpp | 22 odbc-1.5.0/odbc/src/odbc_connection.h | 7 odbc-1.5.0/odbc/src/odbc_result.cpp | 85 +-- odbc-1.5.0/odbc/src/odbc_result.h | 22 odbc-1.5.0/odbc/src/result.cpp | 3 odbc-1.5.0/odbc/src/utils.cpp | 80 +++ odbc-1.5.0/odbc/src/utils.h | 35 + odbc-1.5.0/odbc/tests/testthat/_snaps/dbi-connection.md | 8 odbc-1.5.0/odbc/tests/testthat/_snaps/driver-databricks.md | 30 + odbc-1.5.0/odbc/tests/testthat/_snaps/driver-snowflake.md |only odbc-1.5.0/odbc/tests/testthat/_snaps/driver-sql-server.md | 4 odbc-1.5.0/odbc/tests/testthat/_snaps/driver-sqlite.md |only odbc-1.5.0/odbc/tests/testthat/_snaps/odbc-connection.md | 16 odbc-1.5.0/odbc/tests/testthat/_snaps/utils.md | 141 +++++ odbc-1.5.0/odbc/tests/testthat/test-dbi-connection.R | 9 odbc-1.5.0/odbc/tests/testthat/test-driver-databricks.R | 73 ++ odbc-1.5.0/odbc/tests/testthat/test-driver-snowflake.R |only odbc-1.5.0/odbc/tests/testthat/test-driver-sql-server.R | 13 odbc-1.5.0/odbc/tests/testthat/test-driver-sqlite.R | 52 + odbc-1.5.0/odbc/tests/testthat/test-odbc-config.R | 6 odbc-1.5.0/odbc/tests/testthat/test-odbc-connection.R | 15 odbc-1.5.0/odbc/tests/testthat/test-utils.R | 209 +++++++ odbc-1.5.0/odbc/vignettes/develop.Rmd | 26 odbc-1.5.0/odbc/vignettes/setup.Rmd | 21 79 files changed, 2426 insertions(+), 620 deletions(-)
Title: 'RStudio' Addins and 'Shiny' Modules for Medical Research
Description: 'RStudio' addins and 'Shiny' modules for descriptive statistics, regression and survival analysis.
Author: Jinseob Kim [aut, cre] ,
Zarathu [cph, fnd],
Hyunki Lee [aut],
Changwoo Lim [aut],
Jinhwan Kim [aut] ,
Yoonkyoung Jeon [aut],
Jaewoong Heo [aut]
Maintainer: Jinseob Kim <jinseob2kim@gmail.com>
Diff between jsmodule versions 1.5.4 dated 2024-05-07 and 1.5.5 dated 2024-06-05
DESCRIPTION | 16 - MD5 | 26 - NAMESPACE | 3 NEWS.md | 6 R/FilePsInput.R | 9 R/FileRepeatedInput.R | 8 R/FileSurveyInput.R | 8 R/csvFileInput.R | 9 R/jsBasicGadget.R | 232 ++++++++++++++ R/jsPropensityGadget.R | 780 ++++++++++++++++++++++++++++++++++++++++++++----- R/jsRepeatedGadget.R | 270 +++++++++++++++- R/jsSurveyGadget.R | 340 ++++++++++++++++++--- R/utils.R | 47 +- inst/doc/jsmodule.html | 4 14 files changed, 1549 insertions(+), 209 deletions(-)
Title: Computation of the Double-Entry Intraclass Correlation
Description: The functions compute the double-entry intraclass correlation, which is an index of profile similarity (Furr, 2010; McCrae, 2008). The double-entry intraclass correlation is a more precise index of the agreement of two empirically observed profiles than the often-used intraclass correlation (McCrae, 2008). Profiles comprising correlations are automatically transformed according to the Fisher z-transformation before the double-entry intraclass correlation is calculated. If the profiles comprise scores such as sum scores from various personality scales, it is recommended to standardize each individual score prior to computation of the double-entry intraclass correlation (McCrae, 2008). See Furr (2010) <doi:10.1080/00223890903379134> or McCrae (2008) <doi:10.1080/00223890701845104> for details.
Author: Christian Bloetner, Michael Paul Grosz
Maintainer: Christian Bloetner <c.bloetner@gmail.com>
Diff between iccde versions 0.3.5 dated 2023-02-09 and 0.3.6 dated 2024-06-05
DESCRIPTION | 8 ++-- MD5 | 10 +++-- NAMESPACE | 2 - R/iccdeboot.R |only R/iccdemat.R | 65 ++++++++++++++++++++------------------ man/iccdeboot.Rd |only man/iccdemat.Rd | 92 ++++++++++++++++++++++++++----------------------------- 7 files changed, 89 insertions(+), 88 deletions(-)
Title: General Equilibrium Modeling
Description: Some tools for developing general equilibrium models and some general equilibrium models. These models can be used for teaching economic theory and are built by the methods of new structural economics (see <https://www.nse.pku.edu.cn/> and LI Wu, 2019, ISBN: 9787521804225, General Equilibrium and Structural Dynamics: Perspectives of New Structural Economics. Beijing: Economic Science Press). The model form and mathematical methods can be traced back to J. von Neumann (1945, A Model of General Economic Equilibrium. The Review of Economic Studies, 13. pp. 1-9), J. G. Kemeny, O. Morgenstern and G. L. Thompson (1956, A Generalization of the von Neumann Model of an Expanding Economy, Econometrica, 24, pp. 115-135) et al. By the way, J. G. Kemeny is a co-inventor of the computer language BASIC.
Author: LI Wu <liwu@staff.shu.edu.cn>
Maintainer: LI Wu <liwu.shu@qq.com>
Diff between GE versions 0.4.4 dated 2024-04-30 and 0.4.5 dated 2024-06-05
DESCRIPTION | 6 +- MD5 | 14 +++--- NAMESPACE | 1 R/gemIntertemporal_EndogenousEquilibriumInterestRate.R | 17 ++++--- R/gemIntertemporal_EndogenousEquilibriumInterestRate_MoneyVelocity.R |only R/gemIntertemporal_EndogenousEquilibriumInterestRate__ForeignExchangeRate.R | 22 +++++----- man/gemIntertemporal_EndogenousEquilibriumInterestRate.Rd | 17 ++++--- man/gemIntertemporal_EndogenousEquilibriumInterestRate_ForeignExchangeRate.Rd | 22 +++++----- man/gemIntertemporal_EndogenousEquilibriumInterestRate_MoneyVelocity.Rd |only 9 files changed, 52 insertions(+), 47 deletions(-)
Title: Easily Convert GDP Data
Description: Convert GDP time series data from one unit to
another. All common GDP units are included, i.e. current and constant
local currency units, US$ via market exchange rates and international
dollars via purchasing power parities.
Author: Johannes Koch [aut, cre]
Maintainer: Johannes Koch <jokoch@pik-potsdam.de>
Diff between GDPuc versions 0.11.1 dated 2023-07-20 and 1.0.0 dated 2024-06-05
GDPuc-0.11.1/GDPuc/tests/testthat/test-check_user_input.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-composite_conversions.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-convertGDP.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-elemental_conversions.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-get_conversion_factors.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-print_source_info.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-replace_NAs.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-transform_user_input.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-verbose.R |only GDPuc-0.11.1/GDPuc/tests/testthat/test-warn.R |only GDPuc-1.0.0/GDPuc/DESCRIPTION | 10 GDPuc-1.0.0/GDPuc/MD5 | 86 - GDPuc-1.0.0/GDPuc/NAMESPACE | 2 GDPuc-1.0.0/GDPuc/NEWS.md | 12 GDPuc-1.0.0/GDPuc/R/GDPuc-package.R | 3 GDPuc-1.0.0/GDPuc/R/adapt_source.R | 39 GDPuc-1.0.0/GDPuc/R/check_user_input.R | 41 GDPuc-1.0.0/GDPuc/R/composite_conversions.R | 162 ++- GDPuc-1.0.0/GDPuc/R/convertGDP.R | 80 + GDPuc-1.0.0/GDPuc/R/elemental_conversions.R | 51 + GDPuc-1.0.0/GDPuc/R/print_source_info.R | 21 GDPuc-1.0.0/GDPuc/R/sysdata.rda |binary GDPuc-1.0.0/GDPuc/R/transform_user_input.R | 34 GDPuc-1.0.0/GDPuc/R/ui.R | 2 GDPuc-1.0.0/GDPuc/R/utils.R | 12 GDPuc-1.0.0/GDPuc/README.md | 74 + GDPuc-1.0.0/GDPuc/inst/doc/handle_NAs.R | 24 GDPuc-1.0.0/GDPuc/inst/doc/handle_NAs.Rmd | 22 GDPuc-1.0.0/GDPuc/inst/doc/handle_NAs.html | 482 +++++----- GDPuc-1.0.0/GDPuc/inst/doc/magpie.R | 2 GDPuc-1.0.0/GDPuc/inst/doc/magpie.html | 4 GDPuc-1.0.0/GDPuc/inst/doc/source.R | 4 GDPuc-1.0.0/GDPuc/inst/doc/source.html | 148 +-- GDPuc-1.0.0/GDPuc/inst/doc/verbose.R | 2 GDPuc-1.0.0/GDPuc/inst/doc/verbose.html | 60 - GDPuc-1.0.0/GDPuc/inst/doc/warn.R | 2 GDPuc-1.0.0/GDPuc/inst/doc/warn.html | 2 GDPuc-1.0.0/GDPuc/inst/doc/with_regions.R | 2 GDPuc-1.0.0/GDPuc/inst/doc/with_regions.html | 10 GDPuc-1.0.0/GDPuc/man/GDPuc-package.Rd | 13 GDPuc-1.0.0/GDPuc/man/convertGDP.Rd | 64 + GDPuc-1.0.0/GDPuc/man/print_source_info.Rd | 7 GDPuc-1.0.0/GDPuc/tests/testthat/setup-global_vars.R | 13 GDPuc-1.0.0/GDPuc/tests/testthat/test-01_check_user_input.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-02_transform_user_input.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-03_elemental_conversions.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-04_composite_conversions.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-05_convertGDP.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-06_replace_NAs.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-07_verbose.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-08_warn.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-09_get_conversion_factors.R |only GDPuc-1.0.0/GDPuc/tests/testthat/test-10_print_source_info.R |only GDPuc-1.0.0/GDPuc/vignettes/handle_NAs.Rmd | 22 54 files changed, 936 insertions(+), 576 deletions(-)
Title: 'Fingrid Open Data API' R Client
Description: R API client package for 'Fingrid Open Data'
<https://data.fingrid.fi/> on the electricity market and the power system.
get_data() function holds the main application logic to retrieve
time-series data. API calls require free user account registration.
Data is made available by Fingrid Oyj and distributed under
Creative Commons 4.0 <https://creativecommons.org/licenses/by/4.0/>.
Author: Markus Virtanen [aut, cre],
Kai Hippi [aut]
Maintainer: Markus Virtanen <markus.m.virtanen@gmail.com>
Diff between finnishgrid versions 0.1.0 dated 2022-02-07 and 0.2.0 dated 2024-06-05
finnishgrid-0.1.0/finnishgrid/man/FCRD_hourly_market_prices.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRD_nordic_trade.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRD_procured_volumes_hourly_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRD_received_bids_hourly_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRD_reserve_plans_yearly_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRN_foreign_trade.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRN_hourly_market_prices.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRN_procured_volumes_hourly_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRN_received_bids_hourly_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/FCRN_yearly_market_plans.Rd |only finnishgrid-0.1.0/finnishgrid/man/FFR_price.Rd |only finnishgrid-0.1.0/finnishgrid/man/FFR_procured_volume.Rd |only finnishgrid-0.1.0/finnishgrid/man/FFR_procurement_forecast.Rd |only finnishgrid-0.1.0/finnishgrid/man/FFR_received_bids.Rd |only finnishgrid-0.1.0/finnishgrid/man/activated_FCRN.Rd |only finnishgrid-0.1.0/finnishgrid/man/activated_aFRR_down.Rd |only finnishgrid-0.1.0/finnishgrid/man/activated_aFRR_up.Rd |only finnishgrid-0.1.0/finnishgrid/man/activated_down_regulation_power.Rd |only finnishgrid-0.1.0/finnishgrid/man/activated_up_regulation_power.Rd |only finnishgrid-0.1.0/finnishgrid/man/balancing_capacity_market_bids.Rd |only finnishgrid-0.1.0/finnishgrid/man/balancing_capacity_market_price.Rd |only finnishgrid-0.1.0/finnishgrid/man/balancing_capacity_market_results.Rd |only finnishgrid-0.1.0/finnishgrid/man/bilateral_trade_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/bilateral_trade_capacity_RUS_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/biliteral_trade_capacity_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/border_transmission_fee_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/border_transmission_fee_RUS_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/cogeneration_district_heating_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/commercial_electricity_flow_FI_to_EE.Rd |only finnishgrid-0.1.0/finnishgrid/man/commercial_electricity_flow_FI_to_SE1.Rd |only finnishgrid-0.1.0/finnishgrid/man/commercial_electricity_flow_FI_to_SE3.Rd |only finnishgrid-0.1.0/finnishgrid/man/condensing_power_production_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/consumption_imbalance_electricity_price.Rd |only finnishgrid-0.1.0/finnishgrid/man/day_ahead_transmission_capacity_EE_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/day_ahead_transmission_capacity_FI_to_EE.Rd |only finnishgrid-0.1.0/finnishgrid/man/day_ahead_transmission_capacity_FI_to_SE1.Rd |only finnishgrid-0.1.0/finnishgrid/man/day_ahead_transmission_capacity_FI_to_SE3.Rd |only finnishgrid-0.1.0/finnishgrid/man/day_ahead_transmission_capacity_SE1_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/day_ahead_transmission_capacity_SE3_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/down_regulation_price_balancing_energy_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/electricity_consumption_FI_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/electricity_consumption_forecast_hourly_updated.Rd |only finnishgrid-0.1.0/finnishgrid/man/electricity_consumption_forecast_next_24h.Rd |only finnishgrid-0.1.0/finnishgrid/man/electricity_production_FI_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/electricity_production_prediction_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/electricity_production_prediction_FI_next_24h_as_hourly_energy.Rd |only finnishgrid-0.1.0/finnishgrid/man/emission_factor_electricity_consumed_FI_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/emission_factor_electricity_production_FI_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/exchange_trade_FI_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/figures/README-unnamed-chunk-5-1.png |only finnishgrid-0.1.0/finnishgrid/man/frequency_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/hour_change_regulation_down_regulation.Rd |only finnishgrid-0.1.0/finnishgrid/man/hour_change_regulation_up_regulation.Rd |only finnishgrid-0.1.0/finnishgrid/man/hydro_power_production_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/imbalance_power_FI_to_SE.Rd |only finnishgrid-0.1.0/finnishgrid/man/industrial_cogeneration_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/intraday_transmission_capacity_EE_to_FI_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/intraday_transmission_capacity_FI_to_EE_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/intraday_transmission_capacity_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/intraday_transmission_capacity_RUS_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/kinetic_energy_nordic_power_system_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/last_activated_up_regulation_bid.Rd |only finnishgrid-0.1.0/finnishgrid/man/measured_electrical_transmission_FI_to_Aland.Rd |only finnishgrid-0.1.0/finnishgrid/man/measured_electrical_transmission_FI_to_EE.Rd |only finnishgrid-0.1.0/finnishgrid/man/measured_electrical_transmission_FI_to_NO.Rd |only finnishgrid-0.1.0/finnishgrid/man/measured_electrical_transmission_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/measured_electrical_transmission_FI_to_SE1.Rd |only finnishgrid-0.1.0/finnishgrid/man/measured_electrical_transmission_FI_to_SE3.Rd |only finnishgrid-0.1.0/finnishgrid/man/measured_electricity_P1_north_to_south.Rd |only finnishgrid-0.1.0/finnishgrid/man/net_import_or_export_electricity_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/nuclear_power_production_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/ordered_down_regulations_balancing_energy_market_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/ordered_up_regulations_balancing_energy_market_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/other_power_transactions_down_regulation.Rd |only finnishgrid-0.1.0/finnishgrid/man/other_power_transactions_up_regulation.Rd |only finnishgrid-0.1.0/finnishgrid/man/other_production_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/peak_load_power_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/planned_day_ahead_transmission_capacity_FI_to_SE1.Rd |only finnishgrid-0.1.0/finnishgrid/man/planned_day_ahead_transmission_capacity_FI_to_SE3.Rd |only finnishgrid-0.1.0/finnishgrid/man/planned_day_ahead_transmission_capacity_SE1_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/planned_day_ahead_transmission_capacity_SE3_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/planned_transmission_capacity_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/planned_transmission_capacity_RUS_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/power_system_state_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/price_last_activated_down_regulation_bid_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/procured_aFRR_capacity_down.Rd |only finnishgrid-0.1.0/finnishgrid/man/procured_aFRR_capacity_down_price.Rd |only finnishgrid-0.1.0/finnishgrid/man/procured_aFRR_capacity_up.Rd |only finnishgrid-0.1.0/finnishgrid/man/procured_aFRR_capacity_up_price.Rd |only finnishgrid-0.1.0/finnishgrid/man/production_imbalance_electricity_buying_price.Rd |only finnishgrid-0.1.0/finnishgrid/man/production_imbalance_electricity_sales_price.Rd |only finnishgrid-0.1.0/finnishgrid/man/production_surplus_or_deficit_FI_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/solar_power_generation_forecast_updated_daily.Rd |only finnishgrid-0.1.0/finnishgrid/man/solar_power_generation_forecast_updated_hourly.Rd |only finnishgrid-0.1.0/finnishgrid/man/special_regulation_down_regulation.Rd |only finnishgrid-0.1.0/finnishgrid/man/special_regulation_up_regulation.Rd |only finnishgrid-0.1.0/finnishgrid/man/stock_exchange_capacity_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/stock_exchange_capacity_RUS_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/sum_down_regulation_bids_balancing_energy_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/sum_up_regulation_bids_balancing_energy_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/surplus_or_deficit_cumulative_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/temperature_helsinki_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/temperature_jyvaskyla_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/temperature_oulu_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/temperature_rovaniemi_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/time_deviation_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/total_solar_production_used_in_forecast.Rd |only finnishgrid-0.1.0/finnishgrid/man/total_wind_production_used_in_forecast.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_Aland_to_SE_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_FI_to_EE_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_FI_to_NO_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_FI_to_RUS_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_FI_to_SE1_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_FI_to_SE3_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_RUS_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_intraday_market_FI_to_EE.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_intraday_market_FI_to_SE1.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_intraday_market_FI_to_SE3.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_intraday_market_SE1_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_intraday_market_SE3_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/transmission_capacity_to_be_given_intraday_market_EE_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/unused_bilateral_trade_capacity_RUS_to_FI.Rd |only finnishgrid-0.1.0/finnishgrid/man/unused_biliteral_trade_capacity_FI_to_RUS.Rd |only finnishgrid-0.1.0/finnishgrid/man/up_regulation_price_balancing_energy_market.Rd |only finnishgrid-0.1.0/finnishgrid/man/weekly_planned_capacity_P1_north_to_south.Rd |only finnishgrid-0.1.0/finnishgrid/man/weekly_planned_capacity_P1_south_to_north.Rd |only finnishgrid-0.1.0/finnishgrid/man/wind_power_generation_forecast_daily_updated.Rd |only finnishgrid-0.1.0/finnishgrid/man/wind_power_generation_forecast_hourly_updated.Rd |only finnishgrid-0.1.0/finnishgrid/man/wind_power_hourly_data.Rd |only finnishgrid-0.1.0/finnishgrid/man/wind_power_production_RTD.Rd |only finnishgrid-0.1.0/finnishgrid/vignettes/Introduction.Rmd.orig |only finnishgrid-0.1.0/finnishgrid/vignettes/unnamed-chunk-5-1.png |only finnishgrid-0.2.0/finnishgrid/DESCRIPTION | 18 finnishgrid-0.2.0/finnishgrid/MD5 | 314 finnishgrid-0.2.0/finnishgrid/NAMESPACE | 279 finnishgrid-0.2.0/finnishgrid/NEWS.md |only finnishgrid-0.2.0/finnishgrid/R/finnishgrid.R | 9460 +++++----- finnishgrid-0.2.0/finnishgrid/README.md | 65 finnishgrid-0.2.0/finnishgrid/build/vignette.rds |binary finnishgrid-0.2.0/finnishgrid/inst/doc/Introduction.Rmd | 72 finnishgrid-0.2.0/finnishgrid/inst/doc/Introduction.html | 427 finnishgrid-0.2.0/finnishgrid/man/afrr_activated_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/afrr_activated_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/afrr_capacity_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/afrr_capacity_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/afrr_price_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/afrr_price_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_commercial_electricity_flow_FI_EE.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_commercial_electricity_flow_FI_SE1.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_commercial_electricity_flow_FI_SE3.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_EE_FI_official.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_FI_EE_official.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_FI_SE1_official.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_FI_SE1_planned.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_FI_SE3_official.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_FI_SE3_planned.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_SE1_FI_official.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_SE1_FI_planned.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_SE3_FI_official.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_da_trans_cap_SE3_FI_planned.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_EE_FI.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_EE_FI_RTD.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_FI_EE.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_FI_EE_RTD.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_FI_SE1.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_FI_SE3.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_SE1_FI.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_id_trans_cap_SE3_FI.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_measured_electricity_flow_FI_EE.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_measured_electricity_flow_FI_NO.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_measured_electricity_flow_FI_SE1.Rd |only finnishgrid-0.2.0/finnishgrid/man/border_measured_electricity_flow_FI_SE3.Rd |only finnishgrid-0.2.0/finnishgrid/man/congestion_income_FI_EE.Rd | 30 finnishgrid-0.2.0/finnishgrid/man/congestion_income_FI_SE1.Rd | 28 finnishgrid-0.2.0/finnishgrid/man/congestion_income_FI_SE3.Rd | 30 finnishgrid-0.2.0/finnishgrid/man/electricity_consumption_FI.Rd | 36 finnishgrid-0.2.0/finnishgrid/man/electricity_consumption_forecast_FI.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_consumption_forecast_FI_DA.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_production_FI.Rd | 33 finnishgrid-0.2.0/finnishgrid/man/electricity_production_forecast15_FI_DA.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_production_forecast_FI_DA.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_solar_pwr_production_forecast_daily_upd.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_solar_pwr_production_forecast_quart_upd.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_solar_pwr_total_cap.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_wind_pwr_production.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_wind_pwr_production_forecast_daily_upd.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_wind_pwr_production_forecast_quart_upd.Rd |only finnishgrid-0.2.0/finnishgrid/man/electricity_wind_pwr_total_cap.Rd |only finnishgrid-0.2.0/finnishgrid/man/esg_emission_factor_elec_consumption_FI_RTD.Rd |only finnishgrid-0.2.0/finnishgrid/man/esg_emission_factor_elec_production_FI_RTD.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_hourlymarket_bidsum_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_hourlymarket_bidsum_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_hourlymarket_prices_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_hourlymarket_prices_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_hourlymarket_procured_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_hourlymarket_procured_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_nordictrade_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_nordictrade_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_yearlymarket_plans_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_d_yearlymarket_plans_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_activated.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_activated_down.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_activated_up.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_foreign_trade.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_hourlymarket_bidsum.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_hourlymarket_prices.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_hourlymarket_volumes.Rd |only finnishgrid-0.2.0/finnishgrid/man/fcr_n_yearlymarket_plans.Rd |only finnishgrid-0.2.0/finnishgrid/man/ffr_price.Rd |only finnishgrid-0.2.0/finnishgrid/man/ffr_procured.Rd |only finnishgrid-0.2.0/finnishgrid/man/ffr_procurement_forecast.Rd |only finnishgrid-0.2.0/finnishgrid/man/ffr_received_bids.Rd |only finnishgrid-0.2.0/finnishgrid/man/figures/README-figs-fg-readme-1.png |only finnishgrid-0.2.0/finnishgrid/man/figures/VIGNET-figs-finnishgrid-1.png |only finnishgrid-0.2.0/finnishgrid/man/get_data.Rd | 30 finnishgrid-0.2.0/finnishgrid/man/get_page_data.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_consumption_price.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_DK1.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_DK2.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_FI.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_NO1.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_NO2.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_NO3.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_NO4.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_NO5.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_SE1.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_SE2.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_SE3.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_incentcomp_SE4.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_power_FI_SE.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_price.Rd |only finnishgrid-0.2.0/finnishgrid/man/imbalance_production_purchase_price.Rd |only 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Title: Double Machine Learning in R
Description: Implementation of the double/debiased machine learning framework of
Chernozhukov et al. (2018) <doi:10.1111/ectj.12097> for partially linear
regression models, partially linear instrumental variable regression models,
interactive regression models and interactive instrumental variable
regression models. 'DoubleML' allows estimation of the nuisance parts in
these models by machine learning methods and computation of the Neyman
orthogonal score functions. 'DoubleML' is built on top of 'mlr3' and the
'mlr3' ecosystem. The object-oriented implementation of 'DoubleML' based on
the 'R6' package is very flexible. More information available in the
publication in the Journal of Statistical Software: <doi:10.18637/jss.v108.i03>.
Author: Philipp Bach [aut, cre],
Victor Chernozhukov [aut],
Malte S. Kurz [aut],
Martin Spindler [aut],
Klaassen Sven [aut]
Maintainer: Philipp Bach <philipp.bach@uni-hamburg.de>
Diff between DoubleML versions 1.0.0 dated 2024-02-15 and 1.0.1 dated 2024-06-05
DESCRIPTION | 6 - MD5 | 40 +++--- R/double_ml_iivm.R | 18 +-- R/double_ml_irm.R | 12 +- R/double_ml_pliv.R | 18 +-- R/double_ml_plr.R | 12 +- build/partial.rdb |binary build/vignette.rds |binary inst/doc/Introduction_to_DoubleML.html | 4 inst/doc/getstarted.html | 92 ++++++++-------- inst/doc/install.html | 10 - man/DoubleMLIIVM.Rd | 18 +-- man/DoubleMLIRM.Rd | 12 +- man/DoubleMLPLIV.Rd | 18 +-- man/DoubleMLPLR.Rd | 12 +- tests/testthat/test-double_ml_iivm_tuning.R | 18 +-- tests/testthat/test-double_ml_irm_tuning.R | 12 +- tests/testthat/test-double_ml_pliv_exception_handling.R | 12 +- tests/testthat/test-double_ml_pliv_tuning.R | 42 +++---- tests/testthat/test-double_ml_plr_exception_handling.R | 8 - tests/testthat/test-double_ml_plr_tuning.R | 18 +-- 21 files changed, 191 insertions(+), 191 deletions(-)
Title: Easy Data Wrangling and Statistical Transformations
Description: A lightweight package to assist in key steps involved in any data
analysis workflow: (1) wrangling the raw data to get it in the needed form,
(2) applying preprocessing steps and statistical transformations, and
(3) compute statistical summaries of data properties and distributions.
It is also the data wrangling backend for packages in 'easystats' ecosystem.
References: Patil et al. (2022) <doi:10.21105/joss.04684>.
Author: Indrajeet Patil [aut] ,
Etienne Bacher [aut, cre] ,
Dominique Makowski [aut] ,
Daniel Luedecke [aut] ,
Mattan S. Ben-Shachar [aut] ,
Brenton M. Wiernik [aut] ,
Remi Theriault [ctb] ,
Thomas J. Faulkenberry [rev],
Robert Garrett [rev]
Maintainer: Etienne Bacher <etienne.bacher@protonmail.com>
Diff between datawizard versions 0.10.0 dated 2024-03-26 and 0.11.0 dated 2024-06-05
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datawizard-0.11.0/datawizard/R/data_modify.R | 4 datawizard-0.11.0/datawizard/R/data_partition.R | 24 datawizard-0.11.0/datawizard/R/data_peek.R | 2 datawizard-0.11.0/datawizard/R/data_read.R | 39 datawizard-0.11.0/datawizard/R/data_relocate.R | 4 datawizard-0.11.0/datawizard/R/data_remove.R | 2 datawizard-0.11.0/datawizard/R/data_rename.R | 5 datawizard-0.11.0/datawizard/R/data_replicate.R | 2 datawizard-0.11.0/datawizard/R/data_rescale.R | 14 datawizard-0.11.0/datawizard/R/data_restoretype.R | 1 datawizard-0.11.0/datawizard/R/data_reverse.R | 2 datawizard-0.11.0/datawizard/R/data_select.R | 25 datawizard-0.11.0/datawizard/R/data_separate.R | 2 datawizard-0.11.0/datawizard/R/data_tabulate.R | 2 datawizard-0.11.0/datawizard/R/data_to_long.R | 125 - datawizard-0.11.0/datawizard/R/data_to_wide.R | 106 datawizard-0.11.0/datawizard/R/data_unique.R | 2 datawizard-0.11.0/datawizard/R/data_unite.R | 2 datawizard-0.11.0/datawizard/R/data_write.R | 22 datawizard-0.11.0/datawizard/R/data_xtabulate.R | 4 datawizard-0.11.0/datawizard/R/datawizard-package.R | 8 datawizard-0.11.0/datawizard/R/demean.R | 76 datawizard-0.11.0/datawizard/R/describe_distribution.R | 2 datawizard-0.11.0/datawizard/R/extract_column_names.R |only datawizard-0.11.0/datawizard/R/format.R | 12 datawizard-0.11.0/datawizard/R/labels_to_levels.R | 2 datawizard-0.11.0/datawizard/R/means_by_group.R | 67 datawizard-0.11.0/datawizard/R/normalize.R | 2 datawizard-0.11.0/datawizard/R/ranktransform.R | 2 datawizard-0.11.0/datawizard/R/recode_into.R | 71 datawizard-0.11.0/datawizard/R/recode_values.R | 35 datawizard-0.11.0/datawizard/R/remove_empty.R | 2 datawizard-0.11.0/datawizard/R/replace_nan_inf.R | 2 datawizard-0.11.0/datawizard/R/rescale_weights.R | 33 datawizard-0.11.0/datawizard/R/reshape_ci.R | 12 datawizard-0.11.0/datawizard/R/row_means.R | 4 datawizard-0.11.0/datawizard/R/select_nse.R | 22 datawizard-0.11.0/datawizard/R/skewness_kurtosis.R | 14 datawizard-0.11.0/datawizard/R/slide.R | 6 datawizard-0.11.0/datawizard/R/smoothness.R | 6 datawizard-0.11.0/datawizard/R/standardize.R | 64 datawizard-0.11.0/datawizard/R/standardize.models.R | 2 datawizard-0.11.0/datawizard/R/text_format.R | 21 datawizard-0.11.0/datawizard/R/to_factor.R | 2 datawizard-0.11.0/datawizard/R/to_numeric.R | 2 datawizard-0.11.0/datawizard/R/utils.R | 2 datawizard-0.11.0/datawizard/R/utils_labels.R | 18 datawizard-0.11.0/datawizard/README.md | 84 datawizard-0.11.0/datawizard/build/partial.rdb |binary datawizard-0.11.0/datawizard/build/vignette.rds |binary datawizard-0.11.0/datawizard/inst/WORDLIST | 5 datawizard-0.11.0/datawizard/inst/doc/selection_syntax.R | 4 datawizard-0.11.0/datawizard/inst/doc/selection_syntax.Rmd | 4 datawizard-0.11.0/datawizard/inst/doc/selection_syntax.html | 414 +-- datawizard-0.11.0/datawizard/inst/doc/standardize_data.html | 2 datawizard-0.11.0/datawizard/man/adjust.Rd | 7 datawizard-0.11.0/datawizard/man/assign_labels.Rd | 4 datawizard-0.11.0/datawizard/man/categorize.Rd | 9 datawizard-0.11.0/datawizard/man/center.Rd | 4 datawizard-0.11.0/datawizard/man/coef_var.Rd | 4 datawizard-0.11.0/datawizard/man/convert_na_to.Rd | 4 datawizard-0.11.0/datawizard/man/convert_to_na.Rd | 4 datawizard-0.11.0/datawizard/man/data_codebook.Rd | 4 datawizard-0.11.0/datawizard/man/data_duplicated.Rd | 4 datawizard-0.11.0/datawizard/man/data_extract.Rd | 4 datawizard-0.11.0/datawizard/man/data_group.Rd | 4 datawizard-0.11.0/datawizard/man/data_match.Rd | 5 datawizard-0.11.0/datawizard/man/data_merge.Rd | 34 datawizard-0.11.0/datawizard/man/data_modify.Rd | 4 datawizard-0.11.0/datawizard/man/data_partition.Rd | 18 datawizard-0.11.0/datawizard/man/data_peek.Rd | 4 datawizard-0.11.0/datawizard/man/data_read.Rd | 2 datawizard-0.11.0/datawizard/man/data_relocate.Rd | 9 datawizard-0.11.0/datawizard/man/data_rename.Rd | 9 datawizard-0.11.0/datawizard/man/data_replicate.Rd | 4 datawizard-0.11.0/datawizard/man/data_restoretype.Rd | 2 datawizard-0.11.0/datawizard/man/data_rotate.Rd | 5 datawizard-0.11.0/datawizard/man/data_separate.Rd | 4 datawizard-0.11.0/datawizard/man/data_tabulate.Rd | 4 datawizard-0.11.0/datawizard/man/data_to_long.Rd | 102 datawizard-0.11.0/datawizard/man/data_to_wide.Rd | 113 - datawizard-0.11.0/datawizard/man/data_unique.Rd | 4 datawizard-0.11.0/datawizard/man/data_unite.Rd | 4 datawizard-0.11.0/datawizard/man/datawizard-package.Rd | 2 datawizard-0.11.0/datawizard/man/demean.Rd | 29 datawizard-0.11.0/datawizard/man/describe_distribution.Rd | 4 datawizard-0.11.0/datawizard/man/extract_column_names.Rd |only datawizard-0.11.0/datawizard/man/labels_to_levels.Rd | 4 datawizard-0.11.0/datawizard/man/means_by_group.Rd | 29 datawizard-0.11.0/datawizard/man/normalize.Rd | 4 datawizard-0.11.0/datawizard/man/ranktransform.Rd | 4 datawizard-0.11.0/datawizard/man/recode_values.Rd | 23 datawizard-0.11.0/datawizard/man/rescale.Rd | 4 datawizard-0.11.0/datawizard/man/rescale_weights.Rd | 12 datawizard-0.11.0/datawizard/man/reverse.Rd | 4 datawizard-0.11.0/datawizard/man/row_means.Rd | 6 datawizard-0.11.0/datawizard/man/slide.Rd | 9 datawizard-0.11.0/datawizard/man/smoothness.Rd | 6 datawizard-0.11.0/datawizard/man/standardize.Rd | 4 datawizard-0.11.0/datawizard/man/to_factor.Rd | 4 datawizard-0.11.0/datawizard/man/to_numeric.Rd | 4 datawizard-0.11.0/datawizard/man/winsorize.Rd | 5 datawizard-0.11.0/datawizard/tests/testthat/_snaps/data_partition.md | 272 +- datawizard-0.11.0/datawizard/tests/testthat/_snaps/data_read.md | 240 +- datawizard-0.11.0/datawizard/tests/testthat/_snaps/data_tabulate.md | 1128 +++++----- datawizard-0.11.0/datawizard/tests/testthat/_snaps/data_to_long.md | 69 datawizard-0.11.0/datawizard/tests/testthat/_snaps/demean.md | 138 - datawizard-0.11.0/datawizard/tests/testthat/_snaps/rescale_weights.md | 204 - datawizard-0.11.0/datawizard/tests/testthat/_snaps/text_format.md | 110 datawizard-0.11.0/datawizard/tests/testthat/helper-state.R |only datawizard-0.11.0/datawizard/tests/testthat/test-attributes.R | 4 datawizard-0.11.0/datawizard/tests/testthat/test-data_partition.R | 4 datawizard-0.11.0/datawizard/tests/testthat/test-data_select.R |only datawizard-0.11.0/datawizard/tests/testthat/test-data_tabulate.R | 1 datawizard-0.11.0/datawizard/tests/testthat/test-data_to_long.R | 33 datawizard-0.11.0/datawizard/tests/testthat/test-data_to_wide.R | 149 - datawizard-0.11.0/datawizard/tests/testthat/test-demean.R | 20 datawizard-0.11.0/datawizard/tests/testthat/test-extract_column_names.R |only datawizard-0.11.0/datawizard/tests/testthat/test-labelled_data.R | 8 datawizard-0.11.0/datawizard/tests/testthat/test-recode_into.R | 19 datawizard-0.11.0/datawizard/tests/testthat/test-rescale_weights.R | 18 datawizard-0.11.0/datawizard/tests/testthat/test-select_nse.R | 2 datawizard-0.11.0/datawizard/tests/testthat/test-standardize_datagrid.R | 14 datawizard-0.11.0/datawizard/tests/testthat/test-standardize_models.R | 2 datawizard-0.11.0/datawizard/tests/testthat/test-text_format.R | 10 datawizard-0.11.0/datawizard/vignettes/selection_syntax.Rmd | 4 146 files changed, 2822 insertions(+), 2138 deletions(-)
Title: Seasonal Adjustment of Weekly Data
Description: Perform seasonal adjustment of weekly data. The package offers a user-friendly interface for computing seasonally adjusted estimates of weekly data and also includes diagnostic tools to assess the quality of the adjustments. Furthermore, it incorporates tools uniquely tailored to the specific characteristics of Israeli data. The method is described in more detail in Ginker (2023) <doi:10.13140/RG.2.2.12221.44000>.
Author: Tim Ginker [aut, cre, cph]
Maintainer: Tim Ginker <tim.ginker@gmail.com>
Diff between boiwsa versions 1.1.0 dated 2024-05-22 and 1.1.1 dated 2024-06-05
DESCRIPTION | 8 ++++---- MD5 | 18 ++++++++++-------- NAMESPACE | 2 -- NEWS.md | 4 ++++ R/boiwsa.R | 5 +++-- R/find_opt.R | 3 +-- R/find_outliers.R | 3 +-- README.md | 1 + man/boiwsa.Rd | 2 +- man/figures/README-unnamed-chunk-4-1.png |only man/figures/README-unnamed-chunk-7-1.png |only 11 files changed, 25 insertions(+), 21 deletions(-)
Title: Generalized Reporter Score-Based Enrichment Analysis for Omics
Data
Description: Inspired by the classic 'RSA', we developed the improved 'Generalized Reporter
Score-based Analysis (GRSA)' method, implemented in the R package 'ReporterScore', along
with comprehensive visualization methods and pathway databases. 'GRSA' is a threshold-free
method that works well with all types of biomedical features, such as genes, chemical compounds,
and microbial species. Importantly, the 'GRSA' supports multi-group and longitudinal experimental
designs, because of the included multi-group-compatible statistical methods.
Author: Chen Peng [aut, cre]
Maintainer: Chen Peng <pengchen2001@zju.edu.cn>
Diff between ReporterScore versions 0.1.4 dated 2024-03-29 and 0.1.5 dated 2024-06-05
DESCRIPTION | 6 ++-- MD5 | 29 ++++++++++---------- NAMESPACE | 1 NEWS.md | 21 ++++++++++++++ R/calculation.R | 62 +++++++++++++++++++++++++++++++++++++------- R/check_files.R | 1 R/enrichment.R | 2 - R/plot.R | 4 ++ R/utils-pipe.R | 5 +++ inst/CITATION | 13 +++++---- inst/doc/ReporterScore.html | 9 ++++-- man/combine_rs_res.Rd |only man/get_reporter_score.Rd | 1 man/ko.test.Rd | 3 +- man/pvalue2zs.Rd | 3 +- man/reporter_score.Rd | 3 +- 16 files changed, 124 insertions(+), 39 deletions(-)
Title: Collection of Methods Constructed using Kernel-Based Quadratic
Distances
Description: It includes test for multivariate normality, test for
uniformity on the Sphere, non-parametric two- and k-sample tests,
random generation of points from the Poisson kernel-based density and
clustering algorithm for spherical data. For more information see
Saraceno, G., Markatou, M., Mukhopadhyay, R., Golzy, M. (2024)
<doi:10.48550/arXiv.2402.02290>, Ding, Y., Markatou, M., Saraceno, G. (2023)
<doi:10.5705/ss.202022.0347>, and Golzy, M., Markatou, M. (2020)
<doi:10.1080/10618600.2020.1740713>.
Author: Giovanni Saraceno [aut, cre] ,
Marianthi Markatou [aut],
Raktim Mukhopadhyay [aut],
Mojgan Golzy [aut]
Maintainer: Giovanni Saraceno <gsaracen@buffalo.edu>
Diff between QuadratiK versions 1.1.0 dated 2024-05-14 and 1.1.1 dated 2024-06-05
DESCRIPTION | 10 ++-- MD5 | 84 ++++++++++++++++++++------------------ NAMESPACE | 33 +++++++++++--- R/QuadratiK-package.R | 8 +-- R/breast_cancer.R |only R/clustering_functions.R | 51 ++++++++++++++--------- R/critical_value.R | 2 R/h_selection.R | 28 ++++++------ R/kb.test.R | 84 +++++++++++++++++++++----------------- R/pk.test.R | 18 ++++++-- R/pkbd_functions.R | 13 +++-- R/utility.R | 23 +++++++--- R/wine.R |only data/breast_cancer.rda |only data/wine.rda |only inst/doc/TwoSample_test.R | 4 + inst/doc/TwoSample_test.Rmd | 12 +++-- inst/doc/TwoSample_test.html | 72 ++++++++++++++++---------------- inst/doc/generate_rpkb.Rmd | 1 inst/doc/generate_rpkb.html | 12 ++--- inst/doc/kSample_test.Rmd | 9 +--- inst/doc/kSample_test.html | 34 +++++---------- inst/doc/uniformity.Rmd | 1 inst/doc/uniformity.html | 4 - inst/doc/wireless_clustering.Rmd | 12 ++--- inst/doc/wireless_clustering.html | 38 ++++++++--------- man/QuadratiK-package.Rd | 15 +++++- man/breast_cancer.Rd |only man/kb.test.Rd | 8 +-- man/pkbc.Rd | 9 ---- man/pkbc_validation.Rd | 2 man/select_h.Rd | 8 +-- man/stats_clusters.Rd | 4 - man/summary.pkbc.Rd | 8 +-- man/wine.Rd |only src/Makevars | 2 src/kernel_function.cpp | 76 +++++++++++----------------------- tests/testthat/Rplots.pdf |binary tests/testthat/test-dpkb.R | 2 tests/testthat/test-kb.test.R | 4 - tests/testthat/test-rpkb.R | 2 vignettes/TwoSample_test.Rmd | 12 +++-- vignettes/generate_rpkb.Rmd | 1 vignettes/kSample_test.Rmd | 9 +--- vignettes/uniformity.Rmd | 1 vignettes/wireless_clustering.Rmd | 12 ++--- 46 files changed, 383 insertions(+), 345 deletions(-)
Title: Functions to Assist Design and Analysis of Agronomic Experiments
Description: Provides functions to aid in the design and analysis of
agronomic and agricultural experiments through easy access to
documentation and helper functions, especially for users who are
learning these concepts. While not required for most functionality,
this package enhances the `asreml` package which provides a
computationally efficient algorithm for fitting mixed models
using Residual Maximum Likelihood. It is a commercial package
that can be purchased as 'asreml-R' from 'VSNi'
<https://vsni.co.uk/>, who will supply a zip file for local
installation/updating (see <https://asreml.kb.vsni.co.uk/>).
Author: Sharon Nielsen [aut],
Sam Rogers [aut, cre],
Annie Conway [aut],
University of Adelaide [cph, fnd] ,
Grains Research and Development Corporation [cph, fnd]
Maintainer: Sam Rogers <biometrytraining@adelaide.edu.au>
Diff between biometryassist versions 1.2.0 dated 2024-05-31 and 1.2.1 dated 2024-06-05
DESCRIPTION | 6 - MD5 | 68 +++++++++----- NAMESPACE | 6 + NEWS.md | 8 + R/autoplot.R | 2 R/des_info.R | 4 R/design.R | 12 +- R/heatmap.R | 32 +++++- R/install_asreml.R | 2 R/logltest.R | 2 R/mct.R | 4 R/resplot.R | 4 R/summary_graph.R |only R/utility_functions.R | 134 ++++++++++++++--------------- R/variogram.r | 2 man/autoplot.Rd | 4 man/des_info.Rd | 6 - man/design.Rd | 14 +-- man/heat_map.Rd | 27 ++++- man/install_asreml.Rd | 2 man/logl_test.Rd | 4 man/multiple_comparisons.Rd | 2 man/print.mct.Rd | 4 man/resplot.Rd | 4 man/summary_graph.Rd |only man/variogram.Rd | 2 tests/testthat/_snaps/heatmap |only tests/testthat/_snaps/summary_graph |only tests/testthat/_snaps/utility_functions.md | 2 tests/testthat/test-design.R | 24 +++-- tests/testthat/test-heatmap.R |only tests/testthat/test-summary_graph.R |only 32 files changed, 225 insertions(+), 156 deletions(-)
More information about biometryassist at CRAN
Permanent link
Title: Easily Scrape and Process AFL Data
Description: An easy package for scraping and processing Australia Rules Football (AFL)
data. 'fitzRoy' provides a range of functions for accessing publicly available data
from 'AFL Tables' <https://afltables.com/afl/afl_index.html>, 'Footy Wire' <https://www.footywire.com> and
'The Squiggle' <https://squiggle.com.au>. Further functions allow for easy processing,
cleaning and transformation of this data into formats that can be used for analysis.
Author: James Day [cre, aut],
Robert Nguyen [aut],
Matthew Erbs [ctb],
Oscar Lane [aut],
Jason Zivkovic [ctb],
Jacob Holden [ctb]
Maintainer: James Day <jamesthomasday@gmail.com>
Diff between fitzRoy versions 1.3.0 dated 2023-03-01 and 1.4.0 dated 2024-06-05
fitzRoy-1.3.0/fitzRoy/tests/testthat/_snaps/fetch-player-stats-legacy.md |only fitzRoy-1.4.0/fitzRoy/DESCRIPTION | 14 fitzRoy-1.4.0/fitzRoy/LICENSE |only fitzRoy-1.4.0/fitzRoy/MD5 | 64 +-- fitzRoy-1.4.0/fitzRoy/R/fetch-fixture.R | 135 ++++---- fitzRoy-1.4.0/fitzRoy/R/fetch-results.R | 27 + fitzRoy-1.4.0/fitzRoy/R/fetch-squiggle-data.R | 163 +++------- fitzRoy-1.4.0/fitzRoy/R/helpers-afl.R | 8 fitzRoy-1.4.0/fitzRoy/R/helpers-afltables.R | 64 ++- fitzRoy-1.4.0/fitzRoy/R/helpers-footywire.R | 14 fitzRoy-1.4.0/fitzRoy/inst/doc/aflca-coaches-votes.html | 30 - fitzRoy-1.4.0/fitzRoy/inst/doc/docker-support.R | 2 fitzRoy-1.4.0/fitzRoy/inst/doc/docker-support.Rmd | 14 fitzRoy-1.4.0/fitzRoy/inst/doc/docker-support.html | 26 - fitzRoy-1.4.0/fitzRoy/inst/doc/elo-ratings-example.html | 92 ++--- fitzRoy-1.4.0/fitzRoy/inst/doc/fitzRoy.Rmd | 4 fitzRoy-1.4.0/fitzRoy/inst/doc/fitzRoy.html | 98 +++--- fitzRoy-1.4.0/fitzRoy/inst/doc/main-fetch-functions.R | 2 fitzRoy-1.4.0/fitzRoy/inst/doc/main-fetch-functions.html | 30 - fitzRoy-1.4.0/fitzRoy/inst/doc/player-details.R | 2 fitzRoy-1.4.0/fitzRoy/inst/doc/player-details.html | 16 fitzRoy-1.4.0/fitzRoy/inst/doc/using-fryzigg-stats.R | 2 fitzRoy-1.4.0/fitzRoy/inst/doc/using-fryzigg-stats.html | 6 fitzRoy-1.4.0/fitzRoy/inst/doc/using-squiggle-api.R | 4 fitzRoy-1.4.0/fitzRoy/inst/doc/using-squiggle-api.html | 34 +- fitzRoy-1.4.0/fitzRoy/inst/doc/womens-stats.html | 66 ++-- fitzRoy-1.4.0/fitzRoy/man/fetch_squiggle_data.Rd | 24 - fitzRoy-1.4.0/fitzRoy/tests/testthat/test-fetch-fixture.R | 1 fitzRoy-1.4.0/fitzRoy/tests/testthat/test-fetch-player-stats.R | 9 fitzRoy-1.4.0/fitzRoy/tests/testthat/test-fetch-results.R | 2 fitzRoy-1.4.0/fitzRoy/tests/testthat/test-fetch-squiggle_data.R | 14 fitzRoy-1.4.0/fitzRoy/tests/testthat/test-fetch_lineup.R | 10 fitzRoy-1.4.0/fitzRoy/vignettes/docker-support.Rmd | 14 fitzRoy-1.4.0/fitzRoy/vignettes/fitzRoy.Rmd | 4 34 files changed, 478 insertions(+), 517 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-05-28 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-05-28 1.0.0