Title: Multiple Indicator Cluster Survey (MICS) 2017-18 Data for
Punjab, Pakistan
Description: Provides data set and function for exploration of Multiple Indicator Cluster Survey (MICS) 2017-18 data for Punjab, Pakistan. The results of the present survey are critically important for the purposes of SDG monitoring, as the survey produces information on 32 global SDG indicators. The data was collected from 53,840 households selected at the second stage with systematic random sampling out of a sample of 2,692 clusters selected using Probability Proportional to size sampling. Six questionnaires were used in the survey: (1) a household questionnaire to collect basic demographic information on all de jure household members (usual residents), the household, and the dwelling; (2) a water quality testing questionnaire administered in three households in each cluster of the sample; (3) a questionnaire for individual women administered in each household to all women age 15-49 years; (4) a questionnaire for individual men administered in every second household to all men age 15-49 years; (5 [...truncated...]
Author: Muhammad Yaseen [aut, cre]
Maintainer: Muhammad Yaseen <myaseen208@gmail.com>
Diff between PakPMICS2018 versions 1.0.0 dated 2020-01-25 and 1.1.0 dated 2024-09-13
DESCRIPTION | 19 ++++++++--------- MD5 | 42 +++++++++++++++++++------------------- NEWS.md | 6 +++++ R/PakPMICS2018bh.R | 4 +-- R/PakPMICS2018ch.R | 4 +-- R/PakPMICS2018fs.R | 4 +-- R/PakPMICS2018hh.R | 4 +-- R/PakPMICS2018hl.R | 4 +-- R/PakPMICS2018mm.R | 4 +-- R/PakPMICS2018mn.R | 4 +-- R/PakPMICS2018wm.R | 4 +-- README.md | 55 +++++++++++++++++++------------------------------- build/vignette.rds |binary inst/CITATION | 43 +++++++-------------------------------- man/PakPMICS2018bh.Rd | 10 +++++---- man/PakPMICS2018ch.Rd | 10 +++++---- man/PakPMICS2018fs.Rd | 10 +++++---- man/PakPMICS2018hh.Rd | 10 +++++---- man/PakPMICS2018hl.Rd | 10 +++++---- man/PakPMICS2018mm.Rd | 10 +++++---- man/PakPMICS2018mn.Rd | 10 +++++---- man/PakPMICS2018wm.Rd | 10 +++++---- 22 files changed, 129 insertions(+), 148 deletions(-)
Title: Demographic Analysis and Data Manipulation
Description: Perform tasks commonly encountered when
preparing and analysing demographic data.
Some functions are intended for end users, and
others for developers. Includes functions for
working with life tables.
Author: John Bryant [aut, cre],
Bayesian Demography Limited [cph]
Maintainer: John Bryant <john@bayesiandemography.com>
Diff between poputils versions 0.3.1 dated 2024-06-12 and 0.3.3 dated 2024-09-13
DESCRIPTION | 8 MD5 | 58 ++-- NAMESPACE | 4 NEWS.md | 44 +++ R/age.R | 201 ++++++++------- R/check-functions.R | 370 ++++++++++++++++++---------- R/cpp11.R | 4 R/lifetab.R | 300 +++++++++++++++-------- R/logit.R | 12 R/poputils-package.R | 39 +-- R/rr3.R |only R/to_matrix.R | 147 ++++------- R/trim_01.R |only README.md | 46 ++- build/vignette.rds |binary inst/doc/poputils.R | 6 inst/doc/poputils.Rmd | 10 inst/doc/poputils.html | 196 ++++++++------- man/check_n.Rd |only man/lifetab.Rd | 12 man/poputils-package.Rd | 40 +-- man/q0_to_m0.Rd |only man/rr3.Rd |only man/trim_01.Rd |only src/cpp11.cpp | 8 src/lifetab.cpp | 29 ++ tests/testthat/test-age.R | 37 ++ tests/testthat/test-check-functions.R | 122 ++++++++- tests/testthat/test-lifetab-src.R | 440 ++++++++++++---------------------- tests/testthat/test-lifetab.R | 193 +++++++++++++- tests/testthat/test-rr3.R |only tests/testthat/test-to_matrix.R | 16 - tests/testthat/test-trim_01.R |only vignettes/poputils.Rmd | 10 34 files changed, 1447 insertions(+), 905 deletions(-)
Title: Analyze, Process, Identify, and Share Raman and (FT)IR Spectra
Description: Raman and (FT)IR spectral analysis tool for plastic particles and
other environmental samples (Cowger et al. 2021,
<doi:10.1021/acs.analchem.1c00123>). With read_any(), Open Specy provides a
single function for reading individual, batch, or map spectral data files
like .asp, .csv, .jdx, .spc, .spa, .0, and .zip. process_spec() simplifies
processing spectra, including smoothing, baseline correction,
range restriction and flattening, intensity conversions, wavenumber
alignment, and min-max normalization. Spectra can be identified in batch
using an onboard reference library (Cowger et al. 2020,
<doi:10.1177/0003702820929064>) using match_spec(). A Shiny app is available
via run_app() or online at <https://openanalysis.org/openspecy/>.
Author: Win Cowger [cre, aut, dtc] ,
Zacharias Steinmetz [aut] ,
Nick Leong [aut] ,
Andrea Faltynkova [aut, dtc] ,
Hannah Sherrod [aut] ,
Andrew B Gray [ctb] ,
Hannah Hapich [ctb] ,
Jennifer Lynch [ctb, dtc] ,
Hannah De Frond [ctb, dtc] ,
Keenan Munno [ctb, [...truncated...]
Maintainer: Win Cowger <wincowger@gmail.com>
Diff between OpenSpecy versions 1.1.0 dated 2024-06-13 and 1.2.0 dated 2024-09-13
OpenSpecy-1.1.0/OpenSpecy/R/share_spec.R |only OpenSpecy-1.1.0/OpenSpecy/man/share_spec.Rd |only OpenSpecy-1.1.0/OpenSpecy/tests/testthat/test-share_spec.R |only OpenSpecy-1.1.0/OpenSpecy/tests/testthat/test-workflows.R |only OpenSpecy-1.2.0/OpenSpecy/DESCRIPTION | 15 OpenSpecy-1.2.0/OpenSpecy/MD5 | 217 OpenSpecy-1.2.0/OpenSpecy/NAMESPACE | 414 OpenSpecy-1.2.0/OpenSpecy/NEWS.md | 464 OpenSpecy-1.2.0/OpenSpecy/R/OpenSpecy-package.R | 86 OpenSpecy-1.2.0/OpenSpecy/R/adj_intens.R | 152 OpenSpecy-1.2.0/OpenSpecy/R/adj_range.R | 242 OpenSpecy-1.2.0/OpenSpecy/R/adj_wave.R | 86 OpenSpecy-1.2.0/OpenSpecy/R/as_OpenSpecy.R | 792 - OpenSpecy-1.2.0/OpenSpecy/R/conform_spec.R | 226 OpenSpecy-1.2.0/OpenSpecy/R/data_norm.R | 218 OpenSpecy-1.2.0/OpenSpecy/R/def_features.R | 612 OpenSpecy-1.2.0/OpenSpecy/R/gen_OpenSpecy.R | 256 OpenSpecy-1.2.0/OpenSpecy/R/human_ts.R | 54 OpenSpecy-1.2.0/OpenSpecy/R/interactive_plots.R | 660 - OpenSpecy-1.2.0/OpenSpecy/R/io_spec.R | 320 OpenSpecy-1.2.0/OpenSpecy/R/make_rel.R | 114 OpenSpecy-1.2.0/OpenSpecy/R/manage_lib.R | 534 OpenSpecy-1.2.0/OpenSpecy/R/manage_na.R | 214 OpenSpecy-1.2.0/OpenSpecy/R/manage_spec.R | 422 OpenSpecy-1.2.0/OpenSpecy/R/match_spec.R | 1050 - OpenSpecy-1.2.0/OpenSpecy/R/process_spec.R | 274 OpenSpecy-1.2.0/OpenSpecy/R/raman_hdpe.R | 66 OpenSpecy-1.2.0/OpenSpecy/R/read_envi.R | 348 OpenSpecy-1.2.0/OpenSpecy/R/read_ext.R | 698 - OpenSpecy-1.2.0/OpenSpecy/R/read_multi.R | 209 OpenSpecy-1.2.0/OpenSpecy/R/read_opus.R | 374 OpenSpecy-1.2.0/OpenSpecy/R/read_opus_raw.R | 2054 +-- OpenSpecy-1.2.0/OpenSpecy/R/run_app.R | 112 OpenSpecy-1.2.0/OpenSpecy/R/sig_noise.R | 284 OpenSpecy-1.2.0/OpenSpecy/R/smooth_intens.R | 362 OpenSpecy-1.2.0/OpenSpecy/R/spec_res.R | 90 OpenSpecy-1.2.0/OpenSpecy/R/split_spec.R | 104 OpenSpecy-1.2.0/OpenSpecy/R/subtr_baseline.R | 300 OpenSpecy-1.2.0/OpenSpecy/R/test_lib.R | 38 OpenSpecy-1.2.0/OpenSpecy/R/zzz.R | 14 OpenSpecy-1.2.0/OpenSpecy/README.md | 214 OpenSpecy-1.2.0/OpenSpecy/build/partial.rdb |binary OpenSpecy-1.2.0/OpenSpecy/build/vignette.rds |binary OpenSpecy-1.2.0/OpenSpecy/inst/doc/sop.R | 644 - OpenSpecy-1.2.0/OpenSpecy/inst/doc/sop.Rmd | 1624 +- OpenSpecy-1.2.0/OpenSpecy/inst/doc/sop.html | 6425 +++++----- OpenSpecy-1.2.0/OpenSpecy/inst/extdata/fitr_nitrocellulose.jdx | 2050 +-- OpenSpecy-1.2.0/OpenSpecy/inst/extdata/raman_hdpe.csv | 1930 +-- OpenSpecy-1.2.0/OpenSpecy/inst/extdata/raman_hdpe.json | 2 OpenSpecy-1.2.0/OpenSpecy/inst/extdata/raman_hdpe.yml | 3882 +++--- OpenSpecy-1.2.0/OpenSpecy/inst/extdata/raman_hdpe_os.csv | 4 OpenSpecy-1.2.0/OpenSpecy/man/adj_intens.Rd | 118 OpenSpecy-1.2.0/OpenSpecy/man/adj_range.Rd | 140 OpenSpecy-1.2.0/OpenSpecy/man/as_OpenSpecy.Rd | 414 OpenSpecy-1.2.0/OpenSpecy/man/conform_spec.Rd | 112 OpenSpecy-1.2.0/OpenSpecy/man/data_norm.Rd | 154 OpenSpecy-1.2.0/OpenSpecy/man/def_features.Rd | 232 OpenSpecy-1.2.0/OpenSpecy/man/gen_OpenSpecy.Rd | 146 OpenSpecy-1.2.0/OpenSpecy/man/human_ts.Rd | 60 OpenSpecy-1.2.0/OpenSpecy/man/interactive_plots.Rd | 292 OpenSpecy-1.2.0/OpenSpecy/man/io_spec.Rd | 171 OpenSpecy-1.2.0/OpenSpecy/man/make_rel.Rd | 98 OpenSpecy-1.2.0/OpenSpecy/man/manage_lib.Rd | 388 OpenSpecy-1.2.0/OpenSpecy/man/manage_na.Rd | 116 OpenSpecy-1.2.0/OpenSpecy/man/manage_spec.Rd | 166 OpenSpecy-1.2.0/OpenSpecy/man/match_spec.Rd | 410 OpenSpecy-1.2.0/OpenSpecy/man/process_spec.Rd | 236 OpenSpecy-1.2.0/OpenSpecy/man/raman_hdpe.Rd | 70 OpenSpecy-1.2.0/OpenSpecy/man/read_envi.Rd | 144 OpenSpecy-1.2.0/OpenSpecy/man/read_ext.Rd | 308 OpenSpecy-1.2.0/OpenSpecy/man/read_multi.Rd | 102 OpenSpecy-1.2.0/OpenSpecy/man/read_opus.Rd | 178 OpenSpecy-1.2.0/OpenSpecy/man/read_opus_raw.Rd | 158 OpenSpecy-1.2.0/OpenSpecy/man/run_app.Rd | 88 OpenSpecy-1.2.0/OpenSpecy/man/sig_noise.Rd | 196 OpenSpecy-1.2.0/OpenSpecy/man/smooth_intens.Rd | 208 OpenSpecy-1.2.0/OpenSpecy/man/spec_res.Rd | 82 OpenSpecy-1.2.0/OpenSpecy/man/split_spec.Rd | 80 OpenSpecy-1.2.0/OpenSpecy/man/subtr_baseline.Rd | 156 OpenSpecy-1.2.0/OpenSpecy/man/test_lib.Rd | 42 OpenSpecy-1.2.0/OpenSpecy/tests/logging/test-logging.R | 12 OpenSpecy-1.2.0/OpenSpecy/tests/testthat.R | 14 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/Rplots.pdf |only OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-adj_intens.R | 58 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-adj_range.R | 130 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-adj_wave.R | 34 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-as_OpenSpecy.R | 228 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-conform_spec.R | 148 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-data_norm.R | 38 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-def_features.R | 452 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-gen_OpenSpecy.R | 64 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-human_ts.R | 12 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-interactive_plots.R | 69 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-io_spec.R | 197 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-make_rel.R | 42 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-manage_lib.R | 126 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-manage_na.R | 82 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-manage_spec.R | 144 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-match_spec.R | 625 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-process_spec.R | 70 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-read_envi.R | 61 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-read_ext.R | 231 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-read_multi.R | 40 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-read_opus.R | 86 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-run_app.R | 22 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-sig_noise.R | 124 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-smooth_intens.R | 82 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-spec_res.R | 10 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-split_spec.R | 22 OpenSpecy-1.2.0/OpenSpecy/tests/testthat/test-subtr_baseline.R | 64 OpenSpecy-1.2.0/OpenSpecy/tests/validation/test-augmented.R | 260 OpenSpecy-1.2.0/OpenSpecy/vignettes/sop.Rmd | 1624 +- 112 files changed, 19747 insertions(+), 19739 deletions(-)
Title: Perform HTTP Requests and Process the Responses
Description: Tools for creating and modifying HTTP requests, then
performing them and processing the results. 'httr2' is a modern
re-imagining of 'httr' that uses a pipe-based interface and solves
more of the problems that API wrapping packages face.
Author: Hadley Wickham [aut, cre],
Posit Software, PBC [cph, fnd],
Maximilian Girlich [ctb]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between httr2 versions 1.0.3 dated 2024-08-21 and 1.0.4 dated 2024-09-13
DESCRIPTION | 9 - MD5 | 202 ++++++++++++------------ NAMESPACE | 6 NEWS.md | 13 + R/content-type.R | 2 R/curl.R | 2 R/iterate.R | 5 R/multi-req.R | 6 R/oauth-client.R | 2 R/oauth-flow-auth-code.R | 5 R/oauth-flow-client-credentials.R | 3 R/oauth-flow-device.R | 3 R/oauth-flow-jwt.R | 3 R/oauth-flow-password.R | 3 R/oauth-flow-refresh.R | 3 R/req-body.R | 64 ++++--- R/req-cache.R | 43 +++-- R/req-cookies.R | 57 +++++- R/req-perform-connection.R |only R/req-perform-stream.R | 41 ---- R/req-perform.R | 30 ++- R/req-promise.R | 2 R/req-retries.R | 46 +++-- R/req-throttle.R | 2 R/req.R | 13 + R/resp-body.R | 36 +++- R/resp-headers.R | 4 R/resp-stream.R |only R/resp.R | 10 - R/secret.R | 6 R/sequential.R | 4 R/test.R | 2 R/url.R | 8 R/utils.R | 47 +++++ README.md | 9 - inst/doc/httr2.R | 3 inst/doc/httr2.Rmd | 3 inst/doc/httr2.html | 38 ++-- man/multi_req_perform.Rd | 4 man/oauth_client_req_auth.Rd | 2 man/oauth_token_cached.Rd | 2 man/req_auth_basic.Rd | 2 man/req_auth_bearer_token.Rd | 2 man/req_body.Rd | 2 man/req_cache.Rd | 9 - man/req_cookie_preserve.Rd | 46 ++++- man/req_dry_run.Rd | 2 man/req_error.Rd | 2 man/req_method.Rd | 2 man/req_oauth.Rd | 2 man/req_oauth_auth_code.Rd | 7 man/req_oauth_bearer_jwt.Rd | 5 man/req_oauth_client_credentials.Rd | 5 man/req_oauth_device.Rd | 7 man/req_oauth_password.Rd | 7 man/req_oauth_refresh.Rd | 5 man/req_perform.Rd | 2 man/req_perform_connection.Rd |only man/req_perform_iterative.Rd | 5 man/req_perform_parallel.Rd | 4 man/req_perform_promise.Rd | 4 man/req_perform_sequential.Rd | 4 man/req_perform_stream.Rd | 2 man/req_proxy.Rd | 2 man/req_retry.Rd | 29 ++- man/req_template.Rd | 2 man/req_throttle.Rd | 2 man/req_timeout.Rd | 2 man/req_url.Rd | 2 man/req_user_agent.Rd | 2 man/req_verbose.Rd | 2 man/request.Rd | 16 + man/resp_body_raw.Rd | 2 man/resp_check_content_type.Rd | 2 man/resp_content_type.Rd | 2 man/resp_date.Rd | 2 man/resp_headers.Rd | 2 man/resp_link_url.Rd | 2 man/resp_raw.Rd | 2 man/resp_retry_after.Rd | 2 man/resp_status.Rd | 2 man/resp_stream_raw.Rd |only man/resp_url.Rd | 2 man/secrets.Rd | 6 tests/testthat/_snaps/req-body.md | 9 + tests/testthat/_snaps/req-perform-connection.md |only tests/testthat/_snaps/req-retries.md | 18 ++ tests/testthat/_snaps/resp-stream.md |only tests/testthat/_snaps/resp.md | 7 tests/testthat/_snaps/utils.md | 6 tests/testthat/helper-webfakes.R |only tests/testthat/helper.R |only tests/testthat/test-curl.R | 7 tests/testthat/test-oauth-flow-auth-code.R | 14 - tests/testthat/test-req-body.R | 16 + tests/testthat/test-req-cache.R | 4 tests/testthat/test-req-cookies.R | 18 ++ tests/testthat/test-req-perform-connection.R |only tests/testthat/test-req-perform-stream.R | 4 tests/testthat/test-req-perform.R | 90 ++++++++++ tests/testthat/test-req-retries.R | 10 + tests/testthat/test-req-throttle.R | 19 +- tests/testthat/test-resp-body.R | 12 + tests/testthat/test-resp-stream.R |only tests/testthat/test-resp.R | 3 tests/testthat/test-utils.R | 28 ++- vignettes/httr2.Rmd | 3 107 files changed, 837 insertions(+), 385 deletions(-)
Title: Experimental Design and Analysis for Tree Improvement
Description: Provides data sets and R Codes for E.R. Williams, C.E. Harwood and A.C. Matheson (2023). Experimental Design and Analysis for Tree Improvement, CSIRO Publishing.
Author: Muhammad Yaseen [aut, cre, cph]
,
Sami Ullah [aut, ctb],
Kent Eskridge [aut, ctb],
Emlyn Williams [aut, ctb]
Maintainer: Muhammad Yaseen <myaseen208@gmail.com>
Diff between eda4treeR versions 0.6.0 dated 2023-05-01 and 1.1.0 dated 2024-09-13
DESCRIPTION | 19 ++-- MD5 | 116 ++++++++++++++--------------- NEWS.md | 56 +++++++------- R/DataExam2.1.R | 2 R/DataExam2.2.R | 2 R/DataExam3.1.1.R | 9 +- R/DataExam3.1.R | 8 +- R/DataExam4.3.R | 16 ++-- R/DataExam4.4.R | 10 +- R/DataExam5.1.R | 8 +- R/DataExam5.2.R | 8 +- R/DataExam8.2.R | 24 +++--- R/Exam2.1.R | 9 -- R/Exam2.2.R | 13 +-- R/Exam3.1.1.R | 12 +-- R/Exam3.1.R | 76 ++++++++++++++----- R/Exam4.3.1.R | 14 +-- R/Exam4.3.R | 36 +++++---- R/Exam4.4.R | 12 +-- R/Exam5.1.R | 124 ++++++++++++++++++------------- R/Exam5.2.R | 95 +++++++++++++++--------- R/Exam6.2.R | 57 +++++++------- R/Exam8.1.1.R | 154 ++++++++++++++++++++------------------ R/Exam8.1.2.R | 33 +++++--- R/Exam8.1.R | 27 ++++-- R/Exam8.2.R | 126 +++++++++++++++---------------- README.md | 186 +++++++++++++++++++++++------------------------ data/DataExam2.1.RData |binary data/DataExam2.2.RData |binary data/DataExam3.1.1.RData |binary data/DataExam3.1.RData |binary data/DataExam4.3.RData |binary data/DataExam4.4.RData |binary data/DataExam5.1.RData |binary data/DataExam5.2.RData |binary data/DataExam8.2.RData |binary man/DataExam2.1.Rd | 2 man/DataExam2.2.Rd | 2 man/DataExam3.1.1.Rd | 9 +- man/DataExam3.1.Rd | 8 +- man/DataExam4.3.Rd | 16 ++-- man/DataExam4.4.Rd | 10 +- man/DataExam5.1.Rd | 8 +- man/DataExam5.2.Rd | 8 +- man/DataExam8.2.Rd | 24 +++--- man/Exam2.1.Rd | 8 -- man/Exam2.2.Rd | 12 +-- man/Exam3.1.1.Rd | 11 +- man/Exam3.1.Rd | 76 ++++++++++++++----- man/Exam4.3.1.Rd | 13 +-- man/Exam4.3.Rd | 35 +++++--- man/Exam4.4.Rd | 11 +- man/Exam5.1.Rd | 123 ++++++++++++++++++------------- man/Exam5.2.Rd | 92 +++++++++++++++-------- man/Exam6.2.Rd | 56 +++++++------- man/Exam8.1.1.Rd | 33 +++++--- man/Exam8.1.2.Rd | 32 +++++--- man/Exam8.1.Rd | 26 ++++-- man/Exam8.2.Rd | 17 ++-- 59 files changed, 1081 insertions(+), 803 deletions(-)
Title: Diallel Analysis with R
Description: Performs Diallel Analysis with R using Griffing's and Hayman's approaches. Four different Methods (1: Method-I (Parents + F1's + reciprocals); 2: Method-II (Parents and one set of F1's); 3: Method-III (One set of F1's and reciprocals); 4: Method-IV (One set of F1's only)) and two Models (1: Fixed Effects Model; 2: Random Effects Model) can be applied using Griffing's approach.
Author: Muhammad Yaseen [aut, cre, cph]
,
Kent Eskridge [ctb, aut],
Pedro Barbosa [ctb, aut],
Yuhang Guo [ctb, aut]
Maintainer: Muhammad Yaseen <myaseen208@gmail.com>
Diff between DiallelAnalysisR versions 0.5.0 dated 2023-03-31 and 0.6.0 dated 2024-09-13
DESCRIPTION | 23 +++---- MD5 | 6 - NEWS.md | 56 +++++++++-------- README.md | 197 +++++++++++++++++++++++++++++------------------------------- 4 files changed, 142 insertions(+), 140 deletions(-)
More information about DiallelAnalysisR at CRAN
Permanent link
Title: 'Java' Environments for R Projects
Description: Quickly install 'Java Development Kit (JDK)' without
administrative privileges and set environment variables in current R
session or project to solve common issues with 'Java' environment
management in 'R'. Recommended to users of 'Java'/'rJava'-dependent
'R' packages such as 'r5r', 'opentripplanner', 'xlsx', 'openNLP',
'rWeka', 'RJDBC', 'tabulapdf', and many more. 'rJavaEnv' prevents
common problems like 'Java' not found, 'Java' version conflicts,
missing 'Java' installations, and the inability to install 'Java' due
to lack of administrative privileges. 'rJavaEnv' automates the
download, installation, and setup of the 'Java' on a per-project basis
by setting the relevant 'JAVA_HOME' in the current 'R' session or the
current working directory (via '.Rprofile', with the user's consent).
Similar to what 'renv' does for 'R' packages, 'rJavaEnv' allows
different 'Java' versions to be used across different projects, but
can also be configured to allow multiple versions within the same
proj [...truncated...]
Author: Egor Kotov [aut, cre, cph] ,
Mauricio Vargas [ctb] ,
Hadley Wickham [ctb]
Maintainer: Egor Kotov <kotov.egor@gmail.com>
Diff between rJavaEnv versions 0.2.1 dated 2024-09-03 and 0.2.2 dated 2024-09-13
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NAMESPACE | 1 + NEWS.md | 6 ++++++ R/java_env.R | 8 +++++--- README.md | 2 +- inst/schemaorg.json | 2 +- 7 files changed, 23 insertions(+), 14 deletions(-)
Title: Extensions to 'ggplot2' for Radiation Spectra
Description: Additional annotations, stats, geoms and scales for plotting
"light" spectra with 'ggplot2', together with specializations of ggplot()
and autoplot() methods for spectral data and waveband definitions
stored in objects of classes defined in package 'photobiology'. Part of the
'r4photobiology' suite, Aphalo P. J. (2015) <doi:10.19232/uv4pb.2015.1.14>.
Author: Pedro J. Aphalo [aut, cre] ,
Titta K. Kotilainen [ctb]
Maintainer: Pedro J. Aphalo <pedro.aphalo@helsinki.fi>
Diff between ggspectra versions 0.3.12 dated 2023-10-21 and 0.3.13 dated 2024-09-13
ggspectra-0.3.12/ggspectra/inst/doc/userguide3-data-manip.R |only ggspectra-0.3.12/ggspectra/inst/doc/userguide3-data-manip.Rmd |only ggspectra-0.3.12/ggspectra/inst/doc/userguide3-data-manip.html |only ggspectra-0.3.12/ggspectra/vignettes/userguide3-data-manip.Rmd |only ggspectra-0.3.13/ggspectra/DESCRIPTION | 14 ggspectra-0.3.13/ggspectra/MD5 | 158 - ggspectra-0.3.13/ggspectra/NEWS.md | 31 ggspectra-0.3.13/ggspectra/R/autoplot-calibration-spct.R | 116 ggspectra-0.3.13/ggspectra/R/autoplot-cps-spct.r | 152 - ggspectra-0.3.13/ggspectra/R/autoplot-filter-spct.r | 425 +-- ggspectra-0.3.13/ggspectra/R/autoplot-generic-spct.R | 87 ggspectra-0.3.13/ggspectra/R/autoplot-raw-spct.r | 113 ggspectra-0.3.13/ggspectra/R/autoplot-response-spct.r | 128 ggspectra-0.3.13/ggspectra/R/autoplot-source-spct.r | 181 - ggspectra-0.3.13/ggspectra/R/autotitle.R | 211 + ggspectra-0.3.13/ggspectra/R/axis-labels-texts.R | 159 - ggspectra-0.3.13/ggspectra/R/axis-utils-calibration-spct.R | 41 ggspectra-0.3.13/ggspectra/R/axis-utils-cps-spct.R | 41 ggspectra-0.3.13/ggspectra/R/axis-utils-filter-spct.R | 283 +- ggspectra-0.3.13/ggspectra/R/axis-utils-raw-spct.R | 45 ggspectra-0.3.13/ggspectra/R/axis-utils-response-spct.R | 148 - ggspectra-0.3.13/ggspectra/R/axis-utils-source-spct.R | 99 ggspectra-0.3.13/ggspectra/R/axis-utils-wlength.R | 180 + ggspectra-0.3.13/ggspectra/R/ggplot-methods.R | 27 ggspectra-0.3.13/ggspectra/README.md | 18 ggspectra-0.3.13/ggspectra/build/partial.rdb |binary ggspectra-0.3.13/ggspectra/build/vignette.rds |binary ggspectra-0.3.13/ggspectra/inst/doc/userguide-0-r4p-introduction.html | 4 ggspectra-0.3.13/ggspectra/inst/doc/userguide1-grammar.R | 8 ggspectra-0.3.13/ggspectra/inst/doc/userguide1-grammar.Rmd | 16 ggspectra-0.3.13/ggspectra/inst/doc/userguide1-grammar.html | 1296 +++++----- ggspectra-0.3.13/ggspectra/inst/doc/userguide2-autoplot-methods.R | 47 ggspectra-0.3.13/ggspectra/inst/doc/userguide2-autoplot-methods.Rmd | 99 ggspectra-0.3.13/ggspectra/inst/doc/userguide2-autoplot-methods.html | 472 ++- ggspectra-0.3.13/ggspectra/man/A_label.Rd | 13 ggspectra-0.3.13/ggspectra/man/Afr_label.Rd | 22 ggspectra-0.3.13/ggspectra/man/O_plot.Rd | 5 ggspectra-0.3.13/ggspectra/man/Rfr_label.Rd | 17 ggspectra-0.3.13/ggspectra/man/Tfr_label.Rd | 19 ggspectra-0.3.13/ggspectra/man/autoplot.calibration_spct.Rd | 90 ggspectra-0.3.13/ggspectra/man/autoplot.cps_spct.Rd | 89 ggspectra-0.3.13/ggspectra/man/autoplot.filter_spct.Rd | 124 ggspectra-0.3.13/ggspectra/man/autoplot.generic_spct.Rd | 76 ggspectra-0.3.13/ggspectra/man/autoplot.object_spct.Rd | 111 ggspectra-0.3.13/ggspectra/man/autoplot.raw_spct.Rd | 88 ggspectra-0.3.13/ggspectra/man/autoplot.reflector_spct.Rd | 96 ggspectra-0.3.13/ggspectra/man/autoplot.response_spct.Rd | 96 ggspectra-0.3.13/ggspectra/man/autoplot.source_spct.Rd | 110 ggspectra-0.3.13/ggspectra/man/autotitle.Rd | 30 ggspectra-0.3.13/ggspectra/man/axis_labels.Rd | 27 ggspectra-0.3.13/ggspectra/man/counts_label.Rd | 6 ggspectra-0.3.13/ggspectra/man/cps_label.Rd | 6 ggspectra-0.3.13/ggspectra/man/cps_plot.Rd | 5 ggspectra-0.3.13/ggspectra/man/e_plot.Rd | 13 ggspectra-0.3.13/ggspectra/man/e_rsp_plot.Rd | 5 ggspectra-0.3.13/ggspectra/man/figures/README-example0-1.png |binary ggspectra-0.3.13/ggspectra/man/figures/README-example1-1.png |binary ggspectra-0.3.13/ggspectra/man/figures/README-example2-1.png |binary ggspectra-0.3.13/ggspectra/man/generic_plot.Rd | 9 ggspectra-0.3.13/ggspectra/man/multipliers_label.Rd | 8 ggspectra-0.3.13/ggspectra/man/q_plot.Rd | 5 ggspectra-0.3.13/ggspectra/man/q_rsp_plot.Rd | 5 ggspectra-0.3.13/ggspectra/man/raw_plot.Rd | 5 ggspectra-0.3.13/ggspectra/man/s.e.irrad_label.Rd | 28 ggspectra-0.3.13/ggspectra/man/s.e.response_label.Rd | 15 ggspectra-0.3.13/ggspectra/man/scale_x_energy_eV_continuous.Rd | 11 ggspectra-0.3.13/ggspectra/man/scale_x_frequency_continuous.Rd | 7 ggspectra-0.3.13/ggspectra/man/scale_x_wavenumber_continuous.Rd | 7 ggspectra-0.3.13/ggspectra/man/scale_x_wl_continuous.Rd | 7 ggspectra-0.3.13/ggspectra/man/scale_y_A_continuous.Rd | 20 ggspectra-0.3.13/ggspectra/man/scale_y_Afr_continuous.Rd | 20 ggspectra-0.3.13/ggspectra/man/scale_y_Rfr_continuous.Rd | 33 ggspectra-0.3.13/ggspectra/man/scale_y_Tfr_continuous.Rd | 33 ggspectra-0.3.13/ggspectra/man/scale_y_counts_continuous.Rd | 10 ggspectra-0.3.13/ggspectra/man/scale_y_cps_continuous.Rd | 7 ggspectra-0.3.13/ggspectra/man/scale_y_multipliers_continuous.Rd | 7 ggspectra-0.3.13/ggspectra/man/scale_y_s.e.irrad_continuous.Rd | 19 ggspectra-0.3.13/ggspectra/man/scale_y_s.e.response_continuous.Rd | 19 ggspectra-0.3.13/ggspectra/man/sec_axis_w_number.Rd | 33 ggspectra-0.3.13/ggspectra/man/w_length_label.Rd | 27 ggspectra-0.3.13/ggspectra/vignettes/userguide1-grammar.Rmd | 16 ggspectra-0.3.13/ggspectra/vignettes/userguide2-autoplot-methods.Rmd | 99 82 files changed, 3651 insertions(+), 2446 deletions(-)
Title: Boldness-Recalibration of Binary Events
Description: Boldness-recalibration maximally spreads out probability predictions while maintaining a user specified level of calibration, facilitated the brcal() function. Supporting functions to assess calibration via Bayesian and Frequentist approaches, Maximum Likelihood Estimator (MLE) recalibration, Linear in Log Odds (LLO)-adjust via any specified parameters, and visualize results are also provided. Methodological details can be found in Guthrie & Franck (2024) <doi:10.1080/00031305.2024.2339266>.
Author: Adeline P. Guthrie [aut, cre] ,
Christopher T. Franck [aut]
Maintainer: Adeline P. Guthrie <apguthrie47@gmail.com>
Diff between BRcal versions 0.0.4 dated 2024-06-25 and 1.0.0 dated 2024-09-13
BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br90_ac47b5dd88ca2583e3d44e9682cbe57f.RData |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br90_ac47b5dd88ca2583e3d44e9682cbe57f.rdb |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br90_ac47b5dd88ca2583e3d44e9682cbe57f.rdx |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br90_tau_0145ca272a70355028da45bd15f5589a.RData |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br90_tau_0145ca272a70355028da45bd15f5589a.rdb |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br90_tau_0145ca272a70355028da45bd15f5589a.rdx |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_09588f0c17d7957638d385fbffa61064.RData |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_09588f0c17d7957638d385fbffa61064.rdb |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_09588f0c17d7957638d385fbffa61064.rdx |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_2_4eb1a9e9235c9c6ed392a27e3d820a98.RData |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_2_4eb1a9e9235c9c6ed392a27e3d820a98.rdb |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_2_4eb1a9e9235c9c6ed392a27e3d820a98.rdx |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_3_4701cfca89cc7ddfb92daf695ef21c15.RData |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_3_4701cfca89cc7ddfb92daf695ef21c15.rdb |only BRcal-0.0.4/BRcal/vignettes/hockey_vignette_cache/html/br95_3_4701cfca89cc7ddfb92daf695ef21c15.rdx |only BRcal-1.0.0/BRcal/DESCRIPTION | 12 BRcal-1.0.0/BRcal/MD5 | 57 +-- BRcal-1.0.0/BRcal/NAMESPACE | 2 BRcal-1.0.0/BRcal/R/boldness_recalib.R | 42 -- BRcal-1.0.0/BRcal/R/data.R | 57 ++- BRcal-1.0.0/BRcal/R/plotting_functions.R | 161 ++++++---- BRcal-1.0.0/BRcal/README.md | 2 BRcal-1.0.0/BRcal/build/partial.rdb |only BRcal-1.0.0/BRcal/data/foreclosure.rda |only BRcal-1.0.0/BRcal/inst/doc/hockey_vignette.R | 27 + BRcal-1.0.0/BRcal/inst/doc/hockey_vignette.Rmd | 44 +- BRcal-1.0.0/BRcal/inst/doc/hockey_vignette.html | 145 +++++---- BRcal-1.0.0/BRcal/man/foreclosure.Rd |only BRcal-1.0.0/BRcal/man/lineplot.Rd | 27 + BRcal-1.0.0/BRcal/man/plot_params.Rd | 17 - BRcal-1.0.0/BRcal/vignettes/hockey_vignette.Rmd | 44 +- BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br90_833624141bc7c2f984bd2a2aa5589f83.RData |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br90_833624141bc7c2f984bd2a2aa5589f83.rdb |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br90_833624141bc7c2f984bd2a2aa5589f83.rdx |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br90_tau_5cbcbb517f5ea9a6a92958ce86c80468.RData |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br90_tau_5cbcbb517f5ea9a6a92958ce86c80468.rdb |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br90_tau_5cbcbb517f5ea9a6a92958ce86c80468.rdx |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_2_bc84195f5545bbeeb9459ba87cee4579.RData |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_2_bc84195f5545bbeeb9459ba87cee4579.rdb |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_2_bc84195f5545bbeeb9459ba87cee4579.rdx |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_3_a15138f2ae67678b519d05efb23146d1.RData |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_3_a15138f2ae67678b519d05efb23146d1.rdb |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_3_a15138f2ae67678b519d05efb23146d1.rdx |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_49c34b170b17be939d8b4874d4c661aa.RData |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_49c34b170b17be939d8b4874d4c661aa.rdb |only BRcal-1.0.0/BRcal/vignettes/hockey_vignette_cache/html/br95_49c34b170b17be939d8b4874d4c661aa.rdx |only 46 files changed, 387 insertions(+), 250 deletions(-)
More information about timeSeriesDataSets at CRAN
Permanent link
More information about power.transform at CRAN
Permanent link
Title: Manipulate Date, POSIXct and hms Vectors
Description: Manipulates date ('Date'), date time ('POSIXct') and time
('hms') vectors. Date/times are considered discrete and are floored
whenever encountered. Times are wrapped and time zones are maintained
unless explicitly altered by the user.
Author: Joe Thorley [aut] ,
Ayla Pearson [aut, cre] ,
Poisson Consulting [cph, fnd]
Maintainer: Ayla Pearson <ayla@poissonconsulting.ca>
Diff between dttr2 versions 0.5.0 dated 2023-11-14 and 0.5.1 dated 2024-09-13
dttr2-0.5.0/dttr2/R/namespace.R |only dttr2-0.5.1/dttr2/DESCRIPTION | 13 +++---- dttr2-0.5.1/dttr2/LICENSE | 4 +- dttr2-0.5.1/dttr2/MD5 | 51 ++++++++++++++--------------- dttr2-0.5.1/dttr2/NAMESPACE | 5 ++ dttr2-0.5.1/dttr2/NEWS.md | 7 +++ dttr2-0.5.1/dttr2/R/complete.R | 6 +-- dttr2-0.5.1/dttr2/R/dttr2-package.R | 3 - dttr2-0.5.1/dttr2/R/excel_to_date_time.R | 2 - dttr2-0.5.1/dttr2/R/internal.R | 3 + dttr2-0.5.1/dttr2/R/utils.R | 2 + dttr2-0.5.1/dttr2/README.md | 9 ++--- dttr2-0.5.1/dttr2/man/dtt_adjust_units.Rd | 4 +- dttr2-0.5.1/dttr2/man/dtt_date.Rd | 2 - dttr2-0.5.1/dttr2/man/dtt_date_time.Rd | 2 - dttr2-0.5.1/dttr2/man/dtt_days_in_month.Rd | 4 +- dttr2-0.5.1/dttr2/man/dtt_days_in_year.Rd | 4 +- dttr2-0.5.1/dttr2/man/dtt_daytt.Rd | 4 +- dttr2-0.5.1/dttr2/man/dtt_excel_to_date.Rd | 4 +- dttr2-0.5.1/dttr2/man/dtt_floor.Rd | 2 - dttr2-0.5.1/dttr2/man/dtt_floored.Rd | 2 - dttr2-0.5.1/dttr2/man/dtt_sys_time.Rd | 4 +- dttr2-0.5.1/dttr2/man/dtt_time.Rd | 6 +-- dttr2-0.5.1/dttr2/man/dttr2-package.Rd | 3 + dttr2-0.5.1/dttr2/man/is_date_time.Rd | 4 +- dttr2-0.5.1/dttr2/tests/spelling.R | 9 +++-- dttr2-0.5.1/dttr2/tests/testthat.R | 8 ++++ 27 files changed, 98 insertions(+), 69 deletions(-)
Title: EcoPhyloMapper
Description: Facilitates the aggregation of species' geographic ranges from vector or raster spatial data, and that enables the calculation of various morphological and phylogenetic community metrics across geography. Citation: Title, PO, DL Swiderski and ML Zelditch (2022) <doi:10.1111/2041-210X.13914>.
Author: Pascal Title [aut, cre] ,
Donald Swiderski [aut],
Miriam Zelditch [aut]
Maintainer: Pascal Title <pascal.title@stonybrook.edu>
Diff between epm versions 1.1.2 dated 2023-12-19 and 1.1.3 dated 2024-09-13
DESCRIPTION | 8 +-- MD5 | 24 +++++------ R/addTraits.R | 4 + R/createEPMgrid.R | 3 + R/customBetaDiv.R | 2 R/epm-package.R | 3 - R/gridMetrics.R | 111 +++++++++++++++++++++++++++++++++++++++++++-------- R/tableFromEpmGrid.R | 29 +++++++++++++ build/partial.rdb |binary man/createEPMgrid.Rd | 2 man/customBetaDiv.Rd | 2 man/epm.Rd | 9 ++++ man/gridMetrics.Rd | 15 +++++- 13 files changed, 173 insertions(+), 39 deletions(-)
Title: Nonparametric Bootstrap Test with Pooled Resampling
Description: Addressing crucial research questions often necessitates a small
sample size due to factors such as distinctive target populations, rarity
of the event under study, time and cost constraints, ethical concerns, or
group-level unit of analysis. Many readily available analytic methods,
however, do not accommodate small sample sizes, and the choice of the best
method can be unclear. The 'npboottprm' package enables the execution of
nonparametric bootstrap tests with pooled resampling to help fill this gap.
Grounded in the statistical methods for small sample size studies detailed
in Dwivedi, Mallawaarachchi, and Alvarado (2017) <doi:10.1002/sim.7263>, the
package facilitates a range of statistical tests, encompassing independent
t-tests, paired t-tests, and one-way Analysis of Variance (ANOVA) F-tests.
The nonparboot() function undertakes essential computations, yielding
detailed outputs which include test statistics, effect sizes, confidence
intervals, and bootstrap distributions. F [...truncated...]
Author: Mackson Ncube [aut, cre],
mightymetrika, LLC [cph, fnd]
Maintainer: Mackson Ncube <macksonncube.stats@gmail.com>
Diff between npboottprm versions 0.3.1 dated 2024-07-16 and 0.3.2 dated 2024-09-13
npboottprm-0.3.1/npboottprm/NEWS.md |only npboottprm-0.3.1/npboottprm/man/format_citation.Rd |only npboottprm-0.3.1/npboottprm/man/handle_null.Rd |only npboottprm-0.3.1/npboottprm/man/text_to_vector.Rd |only npboottprm-0.3.2/npboottprm/DESCRIPTION | 12 npboottprm-0.3.2/npboottprm/MD5 | 28 npboottprm-0.3.2/npboottprm/R/app.R | 39 npboottprm-0.3.2/npboottprm/R/replext.R | 204 +- npboottprm-0.3.2/npboottprm/R/replext_helpers.R | 150 - npboottprm-0.3.2/npboottprm/R/replext_pgsql.R | 175 - npboottprm-0.3.2/npboottprm/R/replext_t2.R | 5 npboottprm-0.3.2/npboottprm/R/replext_t4.R | 1008 +++++----- npboottprm-0.3.2/npboottprm/R/replext_t5.R | 652 +++--- npboottprm-0.3.2/npboottprm/R/replext_ts2.R | 977 ++++----- npboottprm-0.3.2/npboottprm/man/replext_pgsql.Rd | 146 - npboottprm-0.3.2/npboottprm/tests/testthat/test-replext_t2.R | 30 npboottprm-0.3.2/npboottprm/tests/testthat/test-replext_ts2.R | 10 17 files changed, 1615 insertions(+), 1821 deletions(-)
Title: Deconvolution of Bulk RNA-Seq Data Based on Deep Learning
Description: Deconvolution of bulk RNA-Seq data using context-specific deconvolution models based on Deep Neural Networks using scRNA-Seq data as input. These models are able to make accurate estimates of the cell composition of bulk RNA-Seq samples from the same context using the advances provided by Deep Learning and the meaningful information provided by scRNA-Seq data. See Torroja and Sanchez-Cabo (2019) <doi:10.3389/fgene.2019.00978> for more details.
Author: Diego Mananes [aut, cre] ,
Carlos Torroja [aut] ,
Fatima Sanchez-Cabo [aut]
Maintainer: Diego Mananes <dmananesc@cnic.es>
Diff between digitalDLSorteR versions 1.0.1 dated 2024-02-07 and 1.1.0 dated 2024-09-13
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More information about digitalDLSorteR at CRAN
Permanent link
Title: Tools for Handling Indices and Proportions in Small Area
Estimation
Description: It allows for mapping proportions and indicators defined on the unit interval. It implements Beta-based small area methods comprising the classical Beta regression models, the Flexible Beta model and Zero and/or One Inflated extensions (Janicki 2020 <doi:10.1080/03610926.2019.1570266>). Such methods, developed within a Bayesian framework through Stan <https://mc-stan.org/>, come equipped with a set of diagnostics and complementary tools, visualizing and exporting functions. A Shiny application with a user-friendly interface can be launched to further simplify the process. For further details, refer to De Nicolò and Gardini (2024 <doi:10.18637/jss.v108.i01>).
Author: Silvia De Nicolo [aut, cre] ,
Aldo Gardini [aut]
Maintainer: Silvia De Nicolo <silvia.denicolo@unibo.it>
Diff between tipsae versions 1.0.2 dated 2024-07-30 and 1.0.3 dated 2024-09-13
DESCRIPTION | 10 - MD5 | 35 ++-- R/fit_sae.R | 2 build/partial.rdb |binary inst/doc/tipsae_vignette.pdf |binary inst/shiny_tipsae/server_files/data_load_server.R | 4 inst/shiny_tipsae/server_files/plots/data_summary_plot_map.R | 7 inst/shiny_tipsae/server_files/plots/results_estimates_map.R | 5 inst/shiny_tipsae/server_files/plots/results_raneff_map_spat.R | 5 inst/shiny_tipsae/server_files/plots/results_raneff_map_temp.R | 5 inst/shiny_tipsae/server_files/plots/results_raneff_map_unstr.R | 5 inst/shiny_tipsae/server_files/plots/results_summary_map_resid.R | 5 inst/shiny_tipsae/server_files/results_estimates_server.R | 4 inst/shiny_tipsae/ui_files/results_estimates.R | 4 inst/shiny_tipsae/www/complement_theme.css | 1 inst/stan/include/transf_par_ZIBalt.stan | 4 man/fit_sae.Rd | 2 src/stanExports_global.h | 80 +++++----- vignettes/tipsae_vignette_output.pdf |only 19 files changed, 91 insertions(+), 87 deletions(-)
Title: Spatial Dependence: Weighting Schemes, Statistics
Description: A collection of functions to create spatial weights matrix
objects from polygon 'contiguities', from point patterns by distance and
tessellations, for summarizing these objects, and for permitting their
use in spatial data analysis, including regional aggregation by minimum
spanning tree; a collection of tests for spatial 'autocorrelation',
including global 'Morans I' and 'Gearys C' proposed by 'Cliff' and 'Ord'
(1973, ISBN: 0850860369) and (1981, ISBN: 0850860814), 'Hubert/Mantel'
general cross product statistic, Empirical Bayes estimates and
'Assunção/Reis' (1999) <doi:10.1002/(SICI)1097-0258(19990830)18:16%3C2147::AID-SIM179%3E3.0.CO;2-I> Index, 'Getis/Ord' G ('Getis' and 'Ord' 1992)
<doi:10.1111/j.1538-4632.1992.tb00261.x> and multicoloured
join count statistics, 'APLE' ('Li 'et al.' )
<doi:10.1111/j.1538-4632.2007.00708.x>, local 'Moran's I', 'Gearys C'
('Anselin' 1995) <doi:10.1111/j.1538-4632.1995.tb00338.x> and
'Getis/Ord' G ('Ord' and 'Getis' 1995)
< [...truncated...]
Author: Roger Bivand [cre, aut] ,
Micah Altman [ctb],
Luc Anselin [ctb],
Renato Assuncao [ctb],
Anil Bera [ctb],
Olaf Berke [ctb],
F. Guillaume Blanchet [ctb],
Marilia Carvalho [ctb],
Bjarke Christensen [ctb],
Yongwan Chun [ctb],
Carsten Dormann [ctb],
Steph [...truncated...]
Maintainer: Roger Bivand <Roger.Bivand@nhh.no>
Diff between spdep versions 1.3-5 dated 2024-06-10 and 1.3-6 dated 2024-09-13
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Title: Interpolation From C
Description: Simple interpolation methods designed to be used from C
code. Supports constant, linear and spline interpolation. An R
wrapper is included but this package is primarily designed to be
used from C code using 'LinkingTo'. The spline calculations are
classical cubic interpolation, e.g., Forsythe, Malcolm and Moler
(1977) <ISBN: 9780131653320>.
Author: Rich FitzJohn [aut, cre],
Imperial College of Science, Technology and Medicine [cph]
Maintainer: Rich FitzJohn <rich.fitzjohn@gmail.com>
Diff between cinterpolate versions 1.0.1 dated 2023-11-29 and 1.0.2 dated 2024-09-13
DESCRIPTION | 6 +++--- LICENSE | 2 +- MD5 | 10 +++++----- build/vignette.rds |binary inst/doc/cinterpolate.html | 4 ++-- src/interpolate.c | 16 ++++++++-------- 6 files changed, 19 insertions(+), 19 deletions(-)
Title: Linear Predictive Models Based on the LIBLINEAR C/C++ Library
Description: A wrapper around the LIBLINEAR C/C++ library for machine
learning (available at
<https://www.csie.ntu.edu.tw/~cjlin/liblinear/>). LIBLINEAR is
a simple library for solving large-scale regularized linear
classification and regression. It currently supports
L2-regularized classification (such as logistic regression,
L2-loss linear SVM and L1-loss linear SVM) as well as
L1-regularized classification (such as L2-loss linear SVM and
logistic regression) and L2-regularized support vector
regression (with L1- or L2-loss). The main features of
LiblineaR include multi-class classification (one-vs-the rest,
and Crammer & Singer method), cross validation for model
selection, probability estimates (logistic regression only) or
weights for unbalanced data. The estimation of the models is
particularly fast as compared to other libraries.
Author: Thibault Helleputte [cre, aut, cph],
Jerome Paul [aut],
Pierre Gramme [aut]
Maintainer: Thibault Helleputte <thibault.helleputte@dnalytics.com>
Diff between LiblineaR versions 2.10-23 dated 2023-12-11 and 2.10-24 dated 2024-09-13
DESCRIPTION | 9 +++--- MD5 | 12 ++++----- NAMESPACE | 2 - NEWS | 3 ++ src/linear.cpp | 68 ++++++++++++++++++++++++++-------------------------- src/predictLinear.c | 10 +++---- src/trainLinear.c | 10 +++---- 7 files changed, 57 insertions(+), 57 deletions(-)
Title: Descriptive Analysis by Groups
Description: Create data summaries for quality control, extensive reports for exploring data, as well as publication-ready univariate or bivariate tables in several formats (plain text, HTML,LaTeX, PDF, Word or Excel. Create figures to quickly visualise the distribution of your data (boxplots, barplots, normality-plots, etc.). Display statistics (mean, median, frequencies, incidences, etc.). Perform the appropriate tests (t-test, Analysis of variance, Kruskal-Wallis, Fisher, log-rank, ...) depending on the nature of the described variable (normal, non-normal or qualitative). Summarize genetic data (Single Nucleotide Polymorphisms) data displaying Allele Frequencies and performing Hardy-Weinberg Equilibrium tests among other typical statistics and tests for these kind of data.
Author: Isaac Subirana [aut, cre] ,
Joan Salvador [ctb]
Maintainer: Isaac Subirana <isubirana@imim.es>
Diff between compareGroups versions 4.8.0 dated 2024-01-29 and 4.9.0 dated 2024-09-13
compareGroups-4.8.0/compareGroups/inst/app/rsconnect |only compareGroups-4.8.0/compareGroups/vignettes/file20385ed07b92.html |only compareGroups-4.8.0/compareGroups/vignettes/file4b40486364bd.html |only compareGroups-4.9.0/compareGroups/DESCRIPTION | 12 compareGroups-4.9.0/compareGroups/MD5 | 94 - compareGroups-4.9.0/compareGroups/NAMESPACE | 1 compareGroups-4.9.0/compareGroups/NEWS.md | 8 compareGroups-4.9.0/compareGroups/R/chisq.test2.R | 7 compareGroups-4.9.0/compareGroups/R/compare.i.R | 6 compareGroups-4.9.0/compareGroups/R/compareGroups.R | 12 compareGroups-4.9.0/compareGroups/R/compareGroups.fit.R | 4 compareGroups-4.9.0/compareGroups/R/createTable.R | 5 compareGroups-4.9.0/compareGroups/R/descrTable.R | 4 compareGroups-4.9.0/compareGroups/R/export2csv.R | 8 compareGroups-4.9.0/compareGroups/R/export2html.R | 8 compareGroups-4.9.0/compareGroups/R/export2latex.cbind.createTable.R | 8 compareGroups-4.9.0/compareGroups/R/export2latex.createTable.R | 8 compareGroups-4.9.0/compareGroups/R/export2md.R | 30 compareGroups-4.9.0/compareGroups/R/export2mdcbind.R | 19 compareGroups-4.9.0/compareGroups/R/export2mdword.R | 6 compareGroups-4.9.0/compareGroups/R/export2mdwordcbind.R | 17 compareGroups-4.9.0/compareGroups/R/export2xls.R | 8 compareGroups-4.9.0/compareGroups/R/format2.R | 12 compareGroups-4.9.0/compareGroups/R/prepare.r | 10 compareGroups-4.9.0/compareGroups/R/print.cbind.createTable.R | 10 compareGroups-4.9.0/compareGroups/R/print.createTable.R | 8 compareGroups-4.9.0/compareGroups/R/table.i.R | 6 compareGroups-4.9.0/compareGroups/build/vignette.rds |binary compareGroups-4.9.0/compareGroups/inst/app/global.R | 8 compareGroups-4.9.0/compareGroups/inst/app/server.R | 20 compareGroups-4.9.0/compareGroups/inst/app/ui.R | 34 compareGroups-4.9.0/compareGroups/inst/app/www/ReGiCor.jpg |only compareGroups-4.9.0/compareGroups/inst/app/www/ciberCV.png |only compareGroups-4.9.0/compareGroups/inst/app/www/datarus.jpg |only compareGroups-4.9.0/compareGroups/inst/app/www/imim.png |only compareGroups-4.9.0/compareGroups/inst/doc/compareGroups_vignette.R | 92 - compareGroups-4.9.0/compareGroups/inst/doc/compareGroups_vignette.Rmd | 30 compareGroups-4.9.0/compareGroups/inst/doc/compareGroups_vignette.html | 726 +++++----- compareGroups-4.9.0/compareGroups/man/compareGroups-internal.Rd | 22 compareGroups-4.9.0/compareGroups/man/compareGroups-package.Rd | 4 compareGroups-4.9.0/compareGroups/man/compareGroups.Rd | 7 compareGroups-4.9.0/compareGroups/man/createTable.Rd | 11 compareGroups-4.9.0/compareGroups/man/descrTable.Rd | 8 compareGroups-4.9.0/compareGroups/man/export2csv.Rd | 7 compareGroups-4.9.0/compareGroups/man/export2html.Rd | 7 compareGroups-4.9.0/compareGroups/man/export2latex.Rd | 10 compareGroups-4.9.0/compareGroups/man/export2md.Rd | 10 compareGroups-4.9.0/compareGroups/man/export2xls.Rd | 4 compareGroups-4.9.0/compareGroups/man/figures/var1age.pdf |binary compareGroups-4.9.0/compareGroups/man/figures/var1sex.pdf |binary compareGroups-4.9.0/compareGroups/vignettes/compareGroups_vignette.Rmd | 30 51 files changed, 705 insertions(+), 636 deletions(-)
Title: Spatial Dependence for Simple Features
Description: An interface to 'spdep' to integrate with 'sf' objects and the 'tidyverse'.
Author: Josiah Parry [aut] ,
Dexter Locke [aut, cre]
Maintainer: Dexter Locke <dexter.locke@gmail.com>
Diff between sfdep versions 0.2.4 dated 2024-02-20 and 0.2.5 dated 2024-09-13
DESCRIPTION | 12 +++++----- MD5 | 13 +++++------ R/spacetime-constructor.R | 4 +-- R/spacetime-methods.R | 2 - R/utils-set-operations.R | 3 ++ build/partial.rdb |binary man/as_spacetime.Rd | 2 - tests/testthat/test-spacetime-constructor_cli_update_patch.R |only 8 files changed, 20 insertions(+), 16 deletions(-)
Title: 'La Societe Nouvelle' API Access
Description: Tools facilitating access to the 'macro_data' service of the
'La Societe Nouvelle' API. It ensures an easy and fully-disclosed
access to all macro-level data used in the 'La Societe Nouvelle'
systems and the related metadata. Related API can be accessed from
<https://api.lasocietenouvelle.org/>.
Author: Joris Blain [aut, cre]
Maintainer: Joris Blain <joris.blain@lasocietenouvelle.org>
Diff between lsnstat versions 1.0.0 dated 2023-04-22 and 1.0.1 dated 2024-09-13
DESCRIPTION | 13 +++--- MD5 | 21 ++++++--- NAMESPACE | 6 ++ NEWS.md |only R/lsnstat-package.R | 18 ++++---- R/lsnstat_macrodata.R | 70 ++++++++++++++++++-------------- R/lsnstat_metadata.R | 46 +++++++++++---------- R/utils.R |only README.md | 4 - man/from_filter_list_to_sql.Rd |only man/get_endpoint.Rd |only man/get_lsn_dataset_list.Rd |only man/lsnstat_macrodata.Rd | 87 ++++++++++++++++++++++------------------- man/lsnstat_metadata.Rd | 70 +++++++++++++++----------------- 14 files changed, 181 insertions(+), 154 deletions(-)
Title: Equating of Multiple Forms
Description: Equating of multiple forms using Item Response Theory (IRT) methods (Battauz M. (2017) <doi:10.1007/s11336-016-9517-x>, Battauz and 'Leoncio' (2023) <doi:10.1177/01466216231151702>, Haberman S. J. (2009) <doi:10.1002/j.2333-8504.2009.tb02197.x>).
Author: Michela Battauz [aut, cre],
Waldir Leoncio [ctb]
Maintainer: Michela Battauz <michela.battauz@uniud.it>
Diff between equateMultiple versions 0.1.2 dated 2024-02-13 and 1.0.0 dated 2024-09-13
DESCRIPTION | 23 MD5 | 32 - NAMESPACE | 8 R/EqMult.r | 911 ++++++++++++++++++---------------- R/RcppExports.R | 8 build/vignette.rds |binary data |only inst/doc/equateMultiple_tutorial.R | 53 - inst/doc/equateMultiple_tutorial.Rmd | 74 +- inst/doc/equateMultiple_tutorial.html | 356 ++++++------- man/equateMultiple-package.Rd | 18 man/itm.Rd | 2 man/mathTest.Rd |only man/multiec.Rd | 41 + src/EqMult.cpp | 164 ++++++ src/Makevars |only src/Makevars.win |only src/RcppExports.cpp | 40 + vignettes/equateMultiple_tutorial.Rmd | 74 +- 19 files changed, 1078 insertions(+), 726 deletions(-)
More information about equateMultiple at CRAN
Permanent link
Title: Symbolic Differentiation
Description: R-based solution for symbolic differentiation. It admits
user-defined function as well as function substitution
in arguments of functions to be differentiated. Some symbolic
simplification is part of the work.
Author: Andrew Clausen [aut],
Serguei Sokol [aut, cre] ,
Andreas Rappold [ctb]
Maintainer: Serguei Sokol <sokol@insa-toulouse.fr>
Diff between Deriv versions 4.1.3 dated 2021-02-24 and 4.1.6 dated 2024-09-13
DESCRIPTION | 12 ++++++------ MD5 | 16 ++++++++-------- NEWS | 21 ++++++++++++++++++++- R/Deriv.R | 20 +++++++++++++------- R/Simplify.R | 32 +++++++++++++++++++++++++++----- inst/CITATION | 2 +- man/Deriv-package.Rd | 4 ++-- man/Deriv.Rd | 17 +++++++++++++---- tests/testthat/test_Deriv.R | 7 +++++-- 9 files changed, 95 insertions(+), 36 deletions(-)
Title: R Interface to SDMX Web Services
Description: Provides functions to retrieve data and metadata from providers
that disseminate data by means of SDMX web services.
SDMX (Statistical Data and Metadata eXchange) is a standard that
has been developed with the aim of simplifying the exchange of
statistical information.
More about the SDMX standard and the SDMX Web Services
can be found at: <https://sdmx.org>.
Author: Attilio Mattiocco [aut, cre]
Maintainer: Attilio Mattiocco <attilio.mattiocco@bancaditalia.it>
Diff between RJSDMX versions 3.3-0 dated 2024-06-04 and 3.4-0 dated 2024-09-13
DESCRIPTION | 10 ++++++---- MD5 | 6 +++--- inst/java/SDMX.jar |binary man/RJSDMX-package.Rd | 2 +- 4 files changed, 10 insertions(+), 8 deletions(-)
Title: Quality Control for Label-Free Proteomics Expression Data
Description: Label-free bottom-up proteomics expression data is often affected by data heterogeneity and missing values. Normalization and missing value imputation are commonly used techniques to address these issues and make the dataset suitable for further downstream analysis. This package provides an optimal combination of normalization and imputation methods for the dataset. The package utilizes three normalization methods and three imputation methods.The statistical evaluation measures named pooled co-efficient of variance, pooled estimate of variance and pooled median absolute deviation are used for selecting the best combination of normalization and imputation method for the given dataset. The user can also visualize the results by using various plots available in this package. The user can also perform the differential expression analysis between two sample groups with the function included in this package. The chosen three normalization methods, three imputation methods and three evaluati [...truncated...]
Author: Kabilan S [aut, cre],
Dr Shashi Bhushan Lal [aut, ths],
Dr Sudhir Srivastava [aut, ths],
Dr Krishna Kumar Chaturvedi [ths],
Dr Yasin Jeshima K [ths],
Dr Ramasubramanian V [ths],
Dr Girish Kumar Jha [ctb]
Maintainer: Kabilan S <kabilan151414@gmail.com>
Diff between lfproQC versions 0.2.0 dated 2024-09-06 and 0.3.0 dated 2024-09-13
lfproQC-0.2.0/lfproQC/R/knn_rlr_yeast_data.R |only lfproQC-0.2.0/lfproQC/data/knn_rlr_yeast_data.rda |only lfproQC-0.2.0/lfproQC/man/knn_rlr_yeast_data.Rd |only lfproQC-0.3.0/lfproQC/DESCRIPTION | 8 lfproQC-0.3.0/lfproQC/MD5 | 49 - lfproQC-0.3.0/lfproQC/NEWS | 7 lfproQC-0.3.0/lfproQC/R/Boxplot_data.R | 2 lfproQC-0.3.0/lfproQC/R/Corrplot_data.R | 2 lfproQC-0.3.0/lfproQC/R/Densityplot_data.R | 2 lfproQC-0.3.0/lfproQC/R/MDSplot_data.R | 2 lfproQC-0.3.0/lfproQC/R/QQplot_data.R | 2 lfproQC-0.3.0/lfproQC/R/best_combination.R | 747 ++++++++++------------ lfproQC-0.3.0/lfproQC/R/rlr_knn_yeast_data.R |only lfproQC-0.3.0/lfproQC/R/top_table_fn.R | 2 lfproQC-0.3.0/lfproQC/README.md |only lfproQC-0.3.0/lfproQC/data/rlr_knn_yeast_data.rda |only lfproQC-0.3.0/lfproQC/inst/doc/user_guide.R | 14 lfproQC-0.3.0/lfproQC/inst/doc/user_guide.Rmd | 14 lfproQC-0.3.0/lfproQC/inst/doc/user_guide.html | 170 ++--- lfproQC-0.3.0/lfproQC/man/Boxplot_data.Rd | 2 lfproQC-0.3.0/lfproQC/man/Corrplot_data.Rd | 2 lfproQC-0.3.0/lfproQC/man/Densityplot_data.Rd | 2 lfproQC-0.3.0/lfproQC/man/MDSplot_data.Rd | 2 lfproQC-0.3.0/lfproQC/man/QQplot_data.Rd | 2 lfproQC-0.3.0/lfproQC/man/best_combination.Rd | 36 - lfproQC-0.3.0/lfproQC/man/lfproQC-package.Rd | 8 lfproQC-0.3.0/lfproQC/man/rlr_knn_yeast_data.Rd |only lfproQC-0.3.0/lfproQC/man/top_table_fn.Rd | 2 lfproQC-0.3.0/lfproQC/vignettes/user_guide.Rmd | 14 29 files changed, 556 insertions(+), 535 deletions(-)
Title: Lightening One-Code Resolving Microbial Ecology Solution
Description: Provides a robust collection of functions tailored for microbial ecology analysis, encompassing both data analysis and visualization. It introduces an encapsulation feature that streamlines the process into a summary object. With the initial configuration of this summary object, users can execute a wide range of analyses with a single line of code, requiring only two essential parameters for setup. The package delivers comprehensive outputs including analysis objects, statistical outcomes, and visualization-ready data, enhancing the efficiency of research workflows. Designed with user-friendliness in mind, it caters to both novices and seasoned researchers, offering an intuitive interface coupled with adaptable customization options to meet diverse analytical needs.
Author: Ningqi Wang [aut, cre, cph],
Yaozhong Zhang [aut],
Gaofei Jiang [aut]
Maintainer: Ningqi Wang <2434066068@qq.com>
Diff between LorMe versions 1.0.0 dated 2024-08-29 and 1.1.0 dated 2024-09-13
LorMe-1.0.0/LorMe/README.md |only LorMe-1.1.0/LorMe/DESCRIPTION | 10 +-- LorMe-1.1.0/LorMe/MD5 | 53 +++++++++----------- LorMe-1.1.0/LorMe/R/Alpha_diversity_calculator.R | 6 +- LorMe-1.1.0/LorMe/R/Deseq_analysis.R | 4 - LorMe-1.1.0/LorMe/R/Filter_function.R | 15 +---- LorMe-1.1.0/LorMe/R/Module_abundance.R | 7 ++ LorMe-1.1.0/LorMe/R/Module_composition.R | 4 - LorMe-1.1.0/LorMe/R/Pre_assumption.R | 4 - LorMe-1.1.0/LorMe/R/community_plot.R | 4 - LorMe-1.1.0/LorMe/R/differential_bar.R | 8 +-- LorMe-1.1.0/LorMe/R/indicator_analysis.R | 4 - LorMe-1.1.0/LorMe/R/network_analysis.R | 46 ++++++++++------- LorMe-1.1.0/LorMe/R/object_config.R | 11 ++++ LorMe-1.1.0/LorMe/R/structure_plot.R | 6 +- LorMe-1.1.0/LorMe/R/tax_summary.R | 3 + LorMe-1.1.0/LorMe/R/tbRDA_analysis.R | 2 LorMe-1.1.0/LorMe/man/Alpha_diversity_calculator.Rd | 4 - LorMe-1.1.0/LorMe/man/Deseq_analysis.Rd | 4 - LorMe-1.1.0/LorMe/man/Filter_function.Rd | 15 +---- LorMe-1.1.0/LorMe/man/Module_composition.Rd | 4 - LorMe-1.1.0/LorMe/man/auto_signif_test.Rd | 4 - LorMe-1.1.0/LorMe/man/community_plot.Rd | 2 LorMe-1.1.0/LorMe/man/differential_bar.Rd | 6 +- LorMe-1.1.0/LorMe/man/indicator_analysis.Rd | 4 - LorMe-1.1.0/LorMe/man/network_analysis.Rd | 3 + LorMe-1.1.0/LorMe/man/structure_plot.Rd | 2 LorMe-1.1.0/LorMe/man/tbRDA_analysis.Rd | 2 28 files changed, 128 insertions(+), 109 deletions(-)
Title: Handle Strings as Vectors of Characters
Description: Creates a new chars class which looks like a string but is actually
a vector of individual characters, making 'strings' iterable. This class
enables vector operations on 'strings' such as reverse, sort, head, and set
operations.
Author: Jonathan Carroll [aut, cre]
Maintainer: Jonathan Carroll <rpkg@jcarroll.com.au>
Diff between charcuterie versions 0.0.3 dated 2024-09-10 and 0.0.4 dated 2024-09-13
DESCRIPTION | 6 +++--- MD5 | 21 ++++++++++++++------- NAMESPACE | 4 ++++ NEWS.md | 5 +++++ R/classes.R |only README.md | 13 ++++++++++++- inst/doc/use_cases.R | 2 +- inst/doc/use_cases.Rmd | 2 +- man/is_alnum.Rd |only man/is_letter.Rd |only man/is_number.Rd |only man/is_punct.Rd |only tests/testthat/test-classes.R |only vignettes/spongebob.jpg |only vignettes/use_cases.Rmd | 2 +- 15 files changed, 41 insertions(+), 14 deletions(-)
Title: Individual Dose Optimization using Population Pharmacokinetics
Description: Optimize drug regimens through model-informed precision dosing,
using individual pharmacokinetic (PK) and pharmacokinetic-pharmacodynamic
(PK-PD) profiles. By integrating therapeutic drug monitoring (TDM) data with
population models, 'posologyr' provides accurate posterior estimates and
enables the calculation of personalized dosing regimens. The empirical Bayes
estimates are computed following the method described by Kang et al. (2012)
<doi:10.4196/kjpp.2012.16.2.97>.
Author: Cyril Leven [aut, cre, cph] ,
Matthew Fidler [ctb] ,
Emmanuelle Comets [ctb],
Audrey Lavenu [ctb],
Marc Lavielle [ctb]
Maintainer: Cyril Leven <cyril.leven@chu-brest.fr>
Diff between posologyr versions 1.2.6 dated 2024-08-27 and 1.2.7 dated 2024-09-13
posologyr-1.2.6/posologyr/build |only posologyr-1.2.6/posologyr/inst/doc |only posologyr-1.2.6/posologyr/tests/testthat/test_issue_53.R |only posologyr-1.2.6/posologyr/vignettes |only posologyr-1.2.7/posologyr/DESCRIPTION | 24 +++---- posologyr-1.2.7/posologyr/MD5 | 48 ++------------- posologyr-1.2.7/posologyr/NAMESPACE | 1 posologyr-1.2.7/posologyr/NEWS.md | 6 + posologyr-1.2.7/posologyr/R/et.R |only posologyr-1.2.7/posologyr/R/param_estim.R | 35 +++------- posologyr-1.2.7/posologyr/R/utils.R | 12 +-- posologyr-1.2.7/posologyr/man/poso_replace_et.Rd |only posologyr-1.2.7/posologyr/man/poso_simu_pop.Rd | 3 13 files changed, 46 insertions(+), 83 deletions(-)
Title: Compute Scagnostics on Pairs of Numeric Variables in a Data Set
Description: Computes a range of scatterplot diagnostics (scagnostics) on pairs
of numerical variables in a data set. A range of scagnostics, including graph
and association-based scagnostics described by Leland Wilkinson and Graham
Wills (2008) <doi:10.1198/106186008X320465> and association-based
scagnostics described by Katrin Grimm (2016,ISBN:978-3-8439-3092-5) can be
computed. Summary and plotting functions are provided.
Author: Harriet Mason [aut, cre] ,
Stuart Lee [aut] ,
Ursula Laa [aut] ,
Dianne Cook [aut]
Maintainer: Harriet Mason <harriet.m.mason@gmail.com>
Diff between cassowaryr versions 2.0.0 dated 2022-08-09 and 2.0.2 dated 2024-09-13
DESCRIPTION | 22 ++-- MD5 | 15 +-- NEWS.md | 10 +- R/scree.R | 5 - build/vignette.rds |binary inst/CITATION | 24 +++- inst/doc/cassowaryr.R | 4 inst/doc/cassowaryr.html | 232 ++++++++++++++++++++++++----------------------- man/figures |only 9 files changed, 172 insertions(+), 140 deletions(-)