Title: Dynamic Panel Multiple Threshold Model with Fixed Effects
Description: Compute the fixed effects dynamic panel threshold model suggested by Ramírez-Rondán (2020) <doi:10.1080/07474938.2019.1624401>, and dynamic panel linear model suggested by Hsiao et al. (2002) <doi:10.1016/S0304-4076(01)00143-9>, where maximum likelihood type estimators are used. Multiple threshold estimation based on Markov Chain Monte Carlo (MCMC) is allowed, and model selection of linear model, threshold model and multiple threshold model is also allowed.
Author: Bai Hujie [aut, cre, cph]
Maintainer: Bai Hujie <hujiebai@163.com>
Diff between DPTM versions 1.5.0 dated 2024-08-17 and 1.6.0 dated 2024-11-28
DESCRIPTION | 10 MD5 | 15 - NEWS.md | 27 + R/DPM.R | 732 ++++++++++++++++++++++++++------------------------- R/RcppExports.R | 30 +- R/thresholdS.R | 790 ++++++++++++++++++++++++++++---------------------------- README.md |only man/DPML.Rd | 4 man/DPTS.Rd | 6 9 files changed, 823 insertions(+), 791 deletions(-)
Title: Weather Forecast Verification Utilities
Description: Utilities for verifying discrete, continuous and probabilistic forecasts, and forecasts expressed as parametric distributions are included.
Author: Eric Gilleland [aut, cre] ,
Matt Pocernich [ctb],
Sabrina Wahl [ctb],
Ronald Frenette [ctb]
Maintainer: Eric Gilleland <eric.gilleland@colostate.edu>
Diff between verification versions 1.42 dated 2015-07-14 and 1.44 dated 2024-11-28
DESCRIPTION | 19 +++++-- MD5 | 111 +++++++++++++++++++++---------------------- NAMESPACE | 2 R/attribute.R | 8 --- R/attribute.default.R | 8 --- R/attribute.prob.bin.R | 8 --- R/conditional.quantile.R | 8 --- R/crps.r | 8 --- R/discrimination.plot.R | 8 --- R/hgtest.R | 35 +++++++++++-- R/leps.r | 8 --- R/observation.error.R | 8 --- R/plot.cont.cont.R | 8 --- R/plot.prob.bin.R | 8 --- R/predcomptests.R | 4 - R/qrelPlotDefault.R | 8 --- R/ranked.hist.R | 8 --- R/reliability.plot.R | 8 --- R/reliability.plot.default.R | 8 --- R/reliability.plot.verify.R | 8 --- R/roc.plot.R | 8 --- R/roc.plot.prob.bin.R | 8 --- R/summary.bin.bin.R | 8 --- R/summary.cat.cat.R | 8 --- R/summary.cont.cont.R | 8 --- R/summary.norm.dist.cont.R | 8 --- R/summary.prob.bin.R | 8 --- R/table.stats.R | 8 --- R/value.r | 8 +-- R/verify.R | 7 -- man/attribute.Rd | 8 --- man/brier.Rd | 8 --- man/conditional.quantile.Rd | 8 --- man/crps.Rd | 18 +----- man/disc.dat.Rd | 8 --- man/discrimination.plot.Rd | 8 --- man/fss.Rd | 8 --- man/hg.test.Rd |only man/leps.Rd | 8 --- man/lines.verify.Rd | 8 --- man/measurement.error.Rd | 8 --- man/multi.cont.Rd | 8 --- man/observation.error.Rd | 8 --- man/performance.diagram.Rd | 8 --- man/pop.Rd | 10 --- man/precip.ensemble.Rd | 8 --- man/predcomp.test.Rd | 10 +-- man/prob.frcs.dat.Rd | 8 --- man/probcont2disc.Rd | 8 --- man/reliability.plot.Rd | 8 --- man/roc.area.Rd | 8 --- man/roc.plot.Rd | 8 --- man/rps.Rd | 10 --- man/table.stats.Rd | 8 --- man/value.Rd | 12 ---- man/verify-internal.Rd | 9 --- man/verify.Rd | 10 --- 57 files changed, 121 insertions(+), 480 deletions(-)
Title: Two-Dimensional Field Smoothing
Description: Perform two-dimensional smoothing for spatial fields using FFT and the convolution theorem (see Gilleland 2013, <doi:10.5065/D61834G2>).
Author: Eric Gilleland [aut, cre]
Maintainer: Eric Gilleland <eric.gilleland@colostate.edu>
Diff between smoothie versions 1.0-3 dated 2021-05-31 and 1.0-4 dated 2024-11-28
DESCRIPTION | 15 +++++++-------- MD5 | 14 +++++++------- build/partial.rdb |binary inst/CITATION | 7 ++++--- man/hoods2dsmooth.Rd | 2 +- man/kernel2dmeitsjer.Rd | 2 +- man/kernel2dsmooth.Rd | 2 +- man/smoothie-package.Rd | 2 +- 8 files changed, 22 insertions(+), 22 deletions(-)
Title: Converts 'Monolix' Models to 'rxode2'
Description: 'Monolix' is a tool for running mixed effects model using
'saem'. This tool allows you to convert 'Monolix' models to 'rxode2'
(Wang, Hallow and James (2016) <doi:10.1002/psp4.12052>) using the
form compatible with 'nlmixr2' (Fidler et al (2019) <doi:10.1002/psp4.12445>).
If available, the 'rxode2' model will
read in the 'Monolix' data and compare the simulation for the
population model individual model and residual
model to immediately show how well the translation is
performing. This saves the model development time for people who are
creating an 'rxode2' model manually. Additionally, this package reads
in all the information to allow simulation with uncertainty (that is the
number of observations, the number of subjects, and the covariance
matrix) with a 'rxode2' model. This is complementary to the
'babelmixr2' package that translates 'nlmixr2' models to 'Monolix' and can
convert the objects converted from 'monolix2rx' to a full 'nlmixr2' fit. While not
required, you c [...truncated...]
Author: Matthew Fidler [aut, cre] ,
Justin Wilkins [ctb]
Maintainer: Matthew Fidler <matthew.fidler@gmail.com>
Diff between monolix2rx versions 0.0.3 dated 2024-10-24 and 0.0.4 dated 2024-11-28
DESCRIPTION | 6 MD5 | 26 NEWS.md | 4 R/content.R | 5 R/dataImport.R | 3 R/ind.R | 25 R/monolix2rx.R | 2 R/validate.R | 8 inst/mlxtranContent.g | 5 src/mlxtranContent.c | 13 src/mlxtranContent.g.d_parser.h | 4798 +++++++++++++++++++++------------------- src/mlxtranInd.c | 14 tests/testthat/test-content.R | 55 tests/testthat/test-ind.R | 2 14 files changed, 2772 insertions(+), 2194 deletions(-)
Title: ISO 3166-1 Country Codes
Description: ISO 3166-1 country codes and ISO 4217 currency codes provided
by the International Organization for Standardization.
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between isocountry versions 0.2.0 dated 2024-04-09 and 0.3.0 dated 2024-11-28
DESCRIPTION | 14 +++++++------- MD5 | 8 ++++---- NEWS.md | 4 ++++ data/isocountry.rda |binary data/isocurrency.rda |binary 5 files changed, 15 insertions(+), 11 deletions(-)
Title: Client for the Ifo Institute Time Series
Description: Download ifo business survey data and more time series from
ifo institute <https://www.ifo.de/en/ifo-time-series>.
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between ifo versions 0.1.0 dated 2024-06-06 and 0.2.0 dated 2024-11-28
DESCRIPTION | 18 +++++++++--------- MD5 | 14 +++++++------- NEWS.md | 4 ++++ R/ifo.R | 2 +- README.md | 16 ++++++++++++---- man/figures/README-plotting-1.png |binary man/ifo-package.Rd | 2 +- tests/testthat/test-ifo.R | 4 +--- 8 files changed, 35 insertions(+), 25 deletions(-)
Title: Doubly Robust Average Partial Effects
Description: Doubly robust average partial effect estimation. This implementation contains methods for adding additional smoothness to plug-in regression procedures and for estimating score functions using smoothing splines. Details of the method can be found in Harvey Klyne and Rajen D. Shah (2023) <doi:10.48550/arXiv.2308.09207>.
Author: Harvey Klyne [aut, cre, cph]
Maintainer: Harvey Klyne <hck33@cantab.ac.uk>
Diff between drape versions 0.0.1 dated 2023-09-18 and 0.0.2 dated 2024-11-28
DESCRIPTION | 14 +++++++------- MD5 | 10 +++++----- NEWS.md | 4 ++++ R/simulation_settings.R | 13 ++++++------- man/simulate_data.Rd | 12 +++++------- man/z_correlated_normal.Rd | 4 ++-- 6 files changed, 29 insertions(+), 28 deletions(-)
Title: Method Functions for Confidence Intervals and to Distill
Information from an Object
Description: Some very simple method functions for confidence interval calculation, bootstrap resampling aimed at atmospheric science applications, and to distill pertinent information from a potentially complex object; primarily used in common with packages extRemes and SpatialVx. To reference this package and for a tutorial on the bootstrap functions, please see Gilleland (2020) <doi: 10.1175/JTECH-D-20-0069.1> and Gilleland (2020) <doi: 10.1175/JTECH-D-20-0070.1>.
Author: Eric Gilleland [aut, cre]
Maintainer: Eric Gilleland <eric.gilleland@colostate.edu>
Diff between distillery versions 1.2-1 dated 2021-05-19 and 1.2-2 dated 2024-11-28
DESCRIPTION | 14 +++++++------- MD5 | 12 ++++++------ R/booter.R | 16 ++++------------ man/booter.Rd | 8 ++------ man/ci.booted.Rd | 2 +- man/pbooter.Rd | 2 +- man/tibber.Rd | 2 +- 7 files changed, 22 insertions(+), 34 deletions(-)
Title: Creates Safety Results Summary in XML to Upload to EudraCT, or
ClinicalTrials.gov
Description: The remit of the European Clinical Trials Data Base (EudraCT <https://eudract.ema.europa.eu/> ), or ClinicalTrials.gov <https://clinicaltrials.gov/>, is to provide open access to summaries of all registered clinical trial results; thus aiming to prevent non-reporting of negative results and provide open-access to results to inform future research. The amount of information required and the format of the results, however, imposes a large extra workload at the end of studies on clinical trial units. In particular, the adverse-event-reporting component requires entering: each unique combination of treatment group and safety event; for every such event above, a further 4 pieces of information (body system, number of occurrences, number of subjects, number exposed) for non-serious events, plus an extra three pieces of data for serious adverse events (numbers of causally related events, deaths, causally related deaths). This package prepares the required statistics needed by Eudr [...truncated...]
Author: Simon Bond [cre],
Beatrice Pantaleo [aut]
Maintainer: Simon Bond <simon.bond7@nhs.net>
Diff between eudract versions 1.0.1 dated 2024-08-23 and 1.0.2 dated 2024-11-28
DESCRIPTION | 8 +-- MD5 | 18 +++---- NEWS.md | 4 + R/safety_summary.R | 4 - inst/doc/eudract.html | 10 +-- tests/testthat/Rplots.pdf |binary tests/testthat/_snaps/dotplot/dotplot-3groups.svg | 56 ++++++++++++++++++---- tests/testthat/_snaps/dotplot/dotplot-ref-rr.svg | 44 +++++++++++++---- tests/testthat/_snaps/dotplot/dotplot-ref.svg | 44 +++++++++++++---- tests/testthat/_snaps/dotplot/dotplot.svg | 44 +++++++++++++---- 10 files changed, 172 insertions(+), 60 deletions(-)
Title: Identify Characteristics of Patients in the OMOP Common Data
Model
Description: Identify the characteristics of patients in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model.
Author: Marti Catala [aut, cre] ,
Yuchen Guo [aut] ,
Mike Du [aut] ,
Kim Lopez-Guell [aut] ,
Edward Burn [aut] ,
Nuria Mercade-Besora [aut] ,
Xintong Li [ctb] ,
Xihang Chen [ctb]
Maintainer: Marti Catala <marti.catalasabate@ndorms.ox.ac.uk>
Diff between PatientProfiles versions 1.2.1 dated 2024-10-25 and 1.2.2 dated 2024-11-28
PatientProfiles-1.2.1/PatientProfiles/R/utils-pipe.R |only PatientProfiles-1.2.1/PatientProfiles/man/pipe.Rd |only PatientProfiles-1.2.2/PatientProfiles/DESCRIPTION | 15 PatientProfiles-1.2.2/PatientProfiles/MD5 | 176 ++--- PatientProfiles-1.2.2/PatientProfiles/NAMESPACE | 3 PatientProfiles-1.2.2/PatientProfiles/NEWS.md | 15 PatientProfiles-1.2.2/PatientProfiles/R/PatientProfiles-package.R | 1 PatientProfiles-1.2.2/PatientProfiles/R/addCategories.R | 32 PatientProfiles-1.2.2/PatientProfiles/R/addCohortIntersect.R | 27 PatientProfiles-1.2.2/PatientProfiles/R/addConceptIntersect.R | 44 - PatientProfiles-1.2.2/PatientProfiles/R/addDeath.R | 12 PatientProfiles-1.2.2/PatientProfiles/R/addDemographics.R | 22 PatientProfiles-1.2.2/PatientProfiles/R/addDemographicsQuery.R | 31 PatientProfiles-1.2.2/PatientProfiles/R/addIntersect.R | 122 +-- PatientProfiles-1.2.2/PatientProfiles/R/addObservationPeriodId.R | 9 PatientProfiles-1.2.2/PatientProfiles/R/addTableIntersect.R | 21 PatientProfiles-1.2.2/PatientProfiles/R/checks.R | 24 PatientProfiles-1.2.2/PatientProfiles/R/formats.R | 10 PatientProfiles-1.2.2/PatientProfiles/R/summariseResult.R | 26 PatientProfiles-1.2.2/PatientProfiles/R/utilities.R | 8 PatientProfiles-1.2.2/PatientProfiles/README.md | 324 ++++------ PatientProfiles-1.2.2/PatientProfiles/inst/doc/cohort-intersect.R | 28 PatientProfiles-1.2.2/PatientProfiles/inst/doc/cohort-intersect.Rmd | 28 PatientProfiles-1.2.2/PatientProfiles/inst/doc/cohort-intersect.html | 122 +-- PatientProfiles-1.2.2/PatientProfiles/inst/doc/concept-intersect.R | 24 PatientProfiles-1.2.2/PatientProfiles/inst/doc/concept-intersect.Rmd | 24 PatientProfiles-1.2.2/PatientProfiles/inst/doc/concept-intersect.html | 119 +-- PatientProfiles-1.2.2/PatientProfiles/inst/doc/demographics.R | 68 +- PatientProfiles-1.2.2/PatientProfiles/inst/doc/demographics.html | 318 ++++----- PatientProfiles-1.2.2/PatientProfiles/inst/doc/demographics.rmd | 68 +- PatientProfiles-1.2.2/PatientProfiles/inst/doc/summarise.html | 213 +++--- PatientProfiles-1.2.2/PatientProfiles/inst/doc/table-intersect.R | 2 PatientProfiles-1.2.2/PatientProfiles/inst/doc/table-intersect.Rmd | 2 PatientProfiles-1.2.2/PatientProfiles/inst/doc/table-intersect.html | 88 +- PatientProfiles-1.2.2/PatientProfiles/man/PatientProfiles-package.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addAgeQuery.Rd | 1 PatientProfiles-1.2.2/PatientProfiles/man/addCategories.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addCdmName.Rd | 2 PatientProfiles-1.2.2/PatientProfiles/man/addCohortIntersectCount.Rd | 3 PatientProfiles-1.2.2/PatientProfiles/man/addCohortIntersectDate.Rd | 7 PatientProfiles-1.2.2/PatientProfiles/man/addCohortIntersectDays.Rd | 7 PatientProfiles-1.2.2/PatientProfiles/man/addCohortIntersectFlag.Rd | 2 PatientProfiles-1.2.2/PatientProfiles/man/addCohortName.Rd | 2 PatientProfiles-1.2.2/PatientProfiles/man/addConceptIntersectCount.Rd | 11 PatientProfiles-1.2.2/PatientProfiles/man/addConceptIntersectDate.Rd | 11 PatientProfiles-1.2.2/PatientProfiles/man/addConceptIntersectDays.Rd | 11 PatientProfiles-1.2.2/PatientProfiles/man/addConceptIntersectFlag.Rd | 11 PatientProfiles-1.2.2/PatientProfiles/man/addDateOfBirth.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addDateOfBirthQuery.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addDeathDate.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addDeathDays.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addDeathFlag.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addDemographics.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addDemographicsQuery.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addFutureObservation.Rd | 3 PatientProfiles-1.2.2/PatientProfiles/man/addFutureObservationQuery.Rd | 3 PatientProfiles-1.2.2/PatientProfiles/man/addInObservation.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addInObservationQuery.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addObservationPeriodId.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addObservationPeriodIdQuery.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addPriorObservation.Rd | 3 PatientProfiles-1.2.2/PatientProfiles/man/addPriorObservationQuery.Rd | 3 PatientProfiles-1.2.2/PatientProfiles/man/addSex.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addSexQuery.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/man/addTableIntersectCount.Rd | 2 PatientProfiles-1.2.2/PatientProfiles/man/addTableIntersectDate.Rd | 2 PatientProfiles-1.2.2/PatientProfiles/man/addTableIntersectDays.Rd | 2 PatientProfiles-1.2.2/PatientProfiles/man/addTableIntersectField.Rd | 2 PatientProfiles-1.2.2/PatientProfiles/man/addTableIntersectFlag.Rd | 3 PatientProfiles-1.2.2/PatientProfiles/man/summariseResult.Rd | 4 PatientProfiles-1.2.2/PatientProfiles/tests/manual/test-sqltest.R | 24 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addAttributes.R | 4 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addCategories.R | 46 - PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addCohortIntersect.R | 212 +++--- PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addConceptIntersect.R | 24 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addDemographics.R | 306 ++++----- PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addFutureObservation.R | 36 - PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addInObservation.R | 28 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addIntersect.R | 232 +++---- PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addObservationPeriodId.R | 76 ++ PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addPriorObservation.R | 24 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addSex.R | 10 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-addTableIntersect.R | 192 ++--- PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-checks.R | 24 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-format.R | 30 PatientProfiles-1.2.2/PatientProfiles/tests/testthat/test-summariseResult.R | 120 +-- PatientProfiles-1.2.2/PatientProfiles/vignettes/cohort-intersect.Rmd | 28 PatientProfiles-1.2.2/PatientProfiles/vignettes/concept-intersect.Rmd | 24 PatientProfiles-1.2.2/PatientProfiles/vignettes/demographics.rmd | 68 +- PatientProfiles-1.2.2/PatientProfiles/vignettes/table-intersect.Rmd | 2 90 files changed, 1904 insertions(+), 1787 deletions(-)
More information about PatientProfiles at CRAN
Permanent link
Title: Graphical User Interface for Data Quality Assessment
Description: A graphical user interface (GUI) to the functions implemented
in the R package 'DQAstats'. Publication: Mang et al. (2021)
<doi:10.1186/s12911-022-01961-z>.
Author: Lorenz A. Kapsner [cre, aut] ,
Jonathan M. Mang [aut] ,
Helene Koester [ctb],
MIRACUM - Medical Informatics in Research and Care in University
Medicine [fnd],
Universitaetsklinikum Erlangen [cph]
Maintainer: Lorenz A. Kapsner <lorenz.kapsner@gmail.com>
Diff between DQAgui versions 0.2.4 dated 2024-06-06 and 0.2.5 dated 2024-11-28
DESCRIPTION | 11 MD5 | 44 R/app_utils.R | 1811 ++++++++++++------------- R/custom_buttons.R | 234 +-- R/dot_helper.R | 52 R/launch_app.R | 194 +- R/moduleAtempPlausibility.R | 2 R/moduleCompleteness.R | 2 R/moduleConfig.R | 343 ++++ R/moduleDashboard.R | 6 R/moduleDescriptive.R | 2 R/moduleDifferences.R | 2 R/moduleLog.R | 2 R/moduleMDR.R | 2 R/moduleReport.R | 2 R/moduleUniquePlausibility.R | 2 inst/application/global.R | 134 - inst/application/server.R | 795 +++++------ inst/application/ui.R | 344 ++-- tests/testthat/_snaps/shinyapp.md | 2688 +++++++++++++++++++------------------- tests/testthat/apps/dqagui/app.R | 88 - tests/testthat/test-lints.R | 66 tests/testthat/test-shinyapp.R | 230 +-- 23 files changed, 3708 insertions(+), 3348 deletions(-)
Title: Radiocarbon Calibration Curves
Description: The IntCal20 radiocarbon calibration curves (Reimer et al. 2020 <doi:10.1017/RDC.2020.68>) are provided as a data package, together with previous IntCal curves (IntCal13, IntCal09, IntCal04, IntCal98), other curves (e.g., NOTCal04 [van der Plicht et al. 2004], Arnold & Libby 1951) and postbomb curves. Also provided are functions to copy the curves into memory, and to read, query and plot the data underlying the IntCal20 curves.
Author: Maarten Blaauw [aut, cre]
Maintainer: Maarten Blaauw <maarten.blaauw@qub.ac.uk>
Diff between rintcal versions 1.0.0 dated 2024-09-23 and 1.1.0 dated 2024-11-28
DESCRIPTION | 8 +++---- MD5 | 26 +++++++++++++---------- NEWS.md | 5 ++++ R/rintcal.R | 50 ++++++++++++++++++++++++++++++++++++---------- build/partial.rdb |binary build/vignette.rds |binary inst/doc/rintcal.R | 6 ++--- inst/doc/rintcal.html | 28 +++++++++++++------------ inst/extdata/NOTCal04.14C |only inst/extdata/intcal20.14c |only inst/extdata/marine20.14c |only inst/extdata/shcal20.14c |only man/ccurve.Rd | 2 + man/glue.ccurves.Rd | 12 ++++++++++- man/mix.ccurves.Rd | 12 +++++++++++ man/rintcal-package.Rd | 2 - 16 files changed, 108 insertions(+), 43 deletions(-)
Title: Generalized Reporter Score-Based Enrichment Analysis for Omics
Data
Description: Inspired by the classic 'RSA', we developed the improved 'Generalized Reporter
Score-based Analysis (GRSA)' method, implemented in the R package 'ReporterScore', along
with comprehensive visualization methods and pathway databases. 'GRSA' is a threshold-free
method that works well with all types of biomedical features, such as genes, chemical compounds,
and microbial species. Importantly, the 'GRSA' supports multi-group and longitudinal experimental
designs, because of the included multi-group-compatible statistical methods.
Author: Chen Peng [aut, cre]
Maintainer: Chen Peng <pengchen2001@zju.edu.cn>
Diff between ReporterScore versions 0.1.8 dated 2024-08-26 and 0.1.9 dated 2024-11-28
DESCRIPTION | 6 ++-- MD5 | 14 +++++----- NEWS.md | 8 +++++ R/calculation.R | 16 ++++++++++- R/check_files.R | 22 ++++++++-------- R/plot.R | 60 ++++++++++++++++++++++++-------------------- inst/doc/ReporterScore.html | 4 +- man/plot_report.Rd | 10 +++++-- 8 files changed, 87 insertions(+), 53 deletions(-)
Title: Sparse-Group SLOPE: Adaptive Bi-Level Selection with FDR Control
Description: Implementation of Sparse-group SLOPE (SGS) (Feser and Evangelou (2023) <doi:10.48550/arXiv.2305.09467>) models. Linear and logistic regression models are supported, both of which can be fit using k-fold cross-validation. Dense and sparse input matrices are supported. In addition, a general Adaptive Three Operator Splitting (ATOS) (Pedregosa and Gidel (2018) <doi:10.48550/arXiv.1804.02339>) implementation is provided. Group SLOPE (gSLOPE) (Brzyski et al. (2019) <doi:10.1080/01621459.2017.1411269>) and group-based OSCAR models (Feser and Evangelou (2024) <doi:10.48550/arXiv.2405.15357>) are also implemented. All models are available with strong screening rules (Feser and Evangelou (2024) <doi:10.48550/arXiv.2405.15357>) for computational speed-up.
Author: Fabio Feser [aut, cre]
Maintainer: Fabio Feser <ff120@ic.ac.uk>
Diff between sgs versions 0.3.1 dated 2024-11-16 and 0.3.2 dated 2024-11-28
DESCRIPTION | 8 +++--- MD5 | 26 ++++++++++----------- R/atos.R | 44 ++++++++++++++++++------------------- R/fit_goscar.R | 22 ++++++++++-------- R/fit_gslope.R | 16 ++++++------- R/fit_sgo.R | 23 ++++++++++++++----- R/fit_sgs.R | 25 +++++++++++++++------ R/global_wrapper_code.R | 5 +++- R/utils.R | 8 ++++++ inst/doc/reproducible_example.html | 12 +++++----- man/fit_goscar.Rd | 14 +++++------ man/fit_gslope.Rd | 14 +++++------ man/fit_sgo.Rd | 22 +++++++++++++----- man/fit_sgs.Rd | 22 +++++++++++++----- 14 files changed, 159 insertions(+), 102 deletions(-)
Title: Patient Rule Induction Method (PRIM)
Description: Patient Rule Induction Method (PRIM) for bump hunting in high-dimensional data.
Author: Tarn Duong [aut, cre]
Maintainer: Tarn Duong <tarn.duong@gmail.com>
Diff between prim versions 1.0.21 dated 2023-01-06 and 1.0.22 dated 2024-11-28
DESCRIPTION | 8 - MD5 | 16 +- build/vignette.rds |binary inst/doc/prim-2d.R | 8 - inst/doc/prim-2d.html | 303 +++++++++++++++++++++++++++----------------------- inst/doc/prim-3d.R | 6 inst/doc/prim-3d.html | 283 ++++++++++++++++++++++++---------------------- man/prim-package.Rd | 1 man/prim.box.Rd | 8 - 9 files changed, 337 insertions(+), 296 deletions(-)
Title: Group Subset Selection
Description: Provides tools for sparse regression modelling with grouped predictors using the group
subset selection penalty. Uses coordinate descent and local search algorithms to rapidly deliver
near optimal estimates. The group subset penalty can be combined with a group lasso or ridge
penalty for added shrinkage. Linear and logistic regression are supported, as are overlapping
groups.
Author: Ryan Thompson [aut, cre]
Maintainer: Ryan Thompson <ryan.thompson-1@uts.edu.au>
Diff between grpsel versions 1.3.1 dated 2022-09-07 and 1.3.2 dated 2024-11-28
DESCRIPTION | 12 MD5 | 32 +- NEWS.md | 5 R/cv-grpsel.R | 15 - R/grpsel.R | 17 - build/vignette.rds |binary inst/CITATION | 19 - inst/doc/vignette.R | 2 inst/doc/vignette.html | 577 +++++++++++++++++++++++------------------------ man/coef.cv.grpsel.Rd | 2 man/coef.grpsel.Rd | 2 man/cv.grpsel.Rd | 2 man/grpsel.Rd | 7 man/plot.cv.grpsel.Rd | 2 man/plot.grpsel.Rd | 2 man/predict.cv.grpsel.Rd | 2 man/predict.grpsel.Rd | 2 17 files changed, 354 insertions(+), 346 deletions(-)
Title: Cross-Design & Cross-Format Network Meta-Analysis and Regression
Description: Network meta-analysis and meta-regression (allows
including up to three covariates) for individual participant data,
aggregate data, and mixtures of both formats using the three-level
hierarchical model. Each format can come from randomized controlled
trials or non-randomized studies or mixtures of both. Estimates are
generated in a Bayesian framework using JAGS. The implemented models
are described by Hamza et al. 2023 <DOI:10.1002/jrsm.1619>.
Author: Tasnim Hamza [aut] ,
Guido Schwarzer [aut, cre] ,
Georgia Salanti [aut]
Maintainer: Guido Schwarzer <guido.schwarzer@uniklinik-freiburg.de>
Diff between crossnma versions 1.2.0 dated 2023-09-18 and 1.3.0 dated 2024-11-28
DESCRIPTION | 16 ++++---- MD5 | 70 ++++++++++++++++++------------------ NAMESPACE | 2 - NEWS.md | 20 ++++++++++ R/crossnma-package.R | 30 +++++++++------ R/crossnma.R | 11 ++--- R/crossnma.code.R | 31 +++++++-------- R/crossnma.model.R | 37 +++++++++---------- R/heatplot.crossnma.R | 2 - R/league.crossnma.R | 32 ++++++++-------- R/max_TE.R | 4 +- R/netconnection.crossnma.R | 6 +-- R/netconnection.crossnma.model.R | 6 +-- R/netgraph.crossnma.R | 13 +++--- R/netgraph.crossnma.model.R | 13 +++--- R/plot.crossnma.R | 2 - R/print.crossnma.R | 2 - R/print.summary.crossnma.R | 2 - R/summary.crossnma.R | 2 - build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 26 +++++++------ inst/doc/crossnma.pdf |binary man/crossnma-package.Rd | 26 ++++++++++--- man/crossnma.Rd | 11 ++--- man/crossnma.model.Rd | 7 ++- man/heatplot.crossnma.Rd | 2 - man/league.crossnma.Rd | 2 - man/netconnection.crossnma.Rd | 2 - man/netconnection.crossnma.model.Rd | 2 - man/netgraph.crossnma.Rd | 4 +- man/netgraph.crossnma.model.Rd | 4 +- man/plot.crossnma.Rd | 2 - man/print.crossnma.Rd | 2 - man/print.summary.crossnma.Rd | 2 - man/summary.crossnma.Rd | 2 - 36 files changed, 219 insertions(+), 176 deletions(-)
Title: Estimate Survival from Common Data Model Cohorts
Description: Estimate survival using data mapped to the Observational Medical Outcomes Partnership common data model. Survival can be estimated based on user-defined study cohorts.
Author: Edward Burn [aut, cre] ,
Kim Lopez-Gueell [aut] ,
Marti Catala [aut] ,
Xintong Li [aut] ,
Danielle Newby [aut] ,
Nuria Mercade-Besora [aut]
Maintainer: Edward Burn <edward.burn@ndorms.ox.ac.uk>
Diff between CohortSurvival versions 0.6.0 dated 2024-11-10 and 0.6.1 dated 2024-11-28
DESCRIPTION | 15 MD5 | 38 - R/CohortSurvival-package.R | 16 R/asSurvivalResult.R | 7 R/deathDiagnostics.R | 11 R/estimateSurvival.R | 14 R/generateDeathCohort.R | 328 ++++++++-------- R/plotSurvival.R | 3 R/tableSurvival.R | 556 ++++++++++++++-------------- R/utils-pipe.R | 28 - R/utils-tidy-eval.R | 216 +++++----- build/vignette.rds |binary inst/doc/a01_Single_event_of_interest.html | 232 ++++++----- inst/doc/a02_Competing_risk_survival.html | 234 ++++++----- inst/doc/a03_Further_survival_analyses.html | 4 man/pipe.Rd | 40 +- man/tidyeval.Rd | 202 +++++----- tests/testthat.R | 24 - tests/testthat/test-deathDiagnostics.R | 372 +++++++++--------- tests/testthat/test-mockMGUS2cdm.R | 26 - 20 files changed, 1205 insertions(+), 1161 deletions(-)
More information about CohortSurvival at CRAN
Permanent link
Title: Dual Feature Reduction for SGL
Description: Implementation of the Dual Feature Reduction (DFR) approach for the Sparse Group Lasso (SGL) and the Adaptive Sparse Group Lasso (aSGL) (Feser and Evangelou (2024) <doi:10.48550/arXiv.2405.17094>). The DFR approach is a feature reduction approach that applies strong screening to reduce the feature space before optimisation, leading to speed-up improvements for fitting SGL (Simon et al. (2013) <doi:10.1080/10618600.2012.681250>) and aSGL (Mendez-Civieta et al. (2020) <doi:10.1007/s11634-020-00413-8> and Poignard (2020) <doi:10.1007/s10463-018-0692-7>) models. DFR is implemented using the Adaptive Three Operator Splitting (ATOS) (Pedregosa and Gidel (2018) <doi:10.48550/arXiv.1804.02339>) algorithm, with linear and logistic SGL models supported, both of which can be fit using k-fold cross-validation. Dense and sparse input matrices are supported.
Author: Fabio Feser [aut, cre]
Maintainer: Fabio Feser <ff120@ic.ac.uk>
Diff between dfr versions 0.1.1 dated 2024-11-16 and 0.1.2 dated 2024-11-28
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- R/dfr_adap_sgl.R | 21 +++++++++++++++++---- R/dfr_sgl.R | 19 +++++++++++++++---- R/global_wrapper_code.R | 10 ++++++++-- R/utils.R | 8 ++++++++ man/dfr_adap_sgl.Rd | 20 ++++++++++++++++---- man/dfr_sgl.Rd | 18 ++++++++++++++---- 8 files changed, 89 insertions(+), 29 deletions(-)
More information about epiparameterDB at CRAN
Permanent link
Title: Bayesian Variable Selection and Model Averaging using Bayesian
Adaptive Sampling
Description: Package for Bayesian Variable Selection and Model Averaging
in linear models and generalized linear models using stochastic or
deterministic sampling without replacement from posterior
distributions. Prior distributions on coefficients are
from Zellner's g-prior or mixtures of g-priors
corresponding to the Zellner-Siow Cauchy Priors or the
mixture of g-priors from Liang et al (2008)
<DOI:10.1198/016214507000001337>
for linear models or mixtures of g-priors from Li and Clyde
(2019) <DOI:10.1080/01621459.2018.1469992> in generalized linear models.
Other model selection criteria include AIC, BIC and Empirical Bayes
estimates of g. Sampling probabilities may be updated based on the sampled
models using sampling w/out replacement or an efficient MCMC algorithm which
samples models using a tree structure of the model space
as an efficient hash table. See Clyde, Ghosh and Littman (2010)
<DOI:10.1198/jcgs.2010.09049> for details on the sampling algorithms.
Uniform prior [...truncated...]
Author: Merlise Clyde [aut, cre, cph] ,
Michael Littman [ctb],
Joyee Ghosh [ctb],
Yingbo Li [ctb],
Betsy Bersson [ctb],
Don van de Bergh [ctb],
Quanli Wang [ctb]
Maintainer: Merlise Clyde <clyde@duke.edu>
Diff between BAS versions 1.7.3 dated 2024-09-17 and 1.7.5 dated 2024-11-28
BAS-1.7.3/BAS/src/const.c |only BAS-1.7.3/BAS/src/mconf.h |only BAS-1.7.5/BAS/DESCRIPTION | 8 - BAS-1.7.5/BAS/MD5 | 140 +++++++++++------------ BAS-1.7.5/BAS/NEWS.md | 34 +++++ BAS-1.7.5/BAS/R/BAS-package.R | 3 BAS-1.7.5/BAS/R/EB_global.R | 4 BAS-1.7.5/BAS/R/as_matrix.R | 3 BAS-1.7.5/BAS/R/bas_glm.R | 4 BAS-1.7.5/BAS/R/bas_lm.R | 59 ++++++++- BAS-1.7.5/BAS/R/beta_priors.R | 4 BAS-1.7.5/BAS/R/cch.R | 4 BAS-1.7.5/BAS/R/coefficients.R | 4 BAS-1.7.5/BAS/R/confint.R | 4 BAS-1.7.5/BAS/R/cv_summary.R | 4 BAS-1.7.5/BAS/R/data.R | 4 BAS-1.7.5/BAS/R/diagnostics.R | 4 BAS-1.7.5/BAS/R/eplogprob.R | 4 BAS-1.7.5/BAS/R/glm_fit.R | 4 BAS-1.7.5/BAS/R/hypergeometric1F1.R | 4 BAS-1.7.5/BAS/R/hypergeometric2F1.R | 4 BAS-1.7.5/BAS/R/image.R | 4 BAS-1.7.5/BAS/R/interactions.R | 91 ++++++++++++++ BAS-1.7.5/BAS/R/model_priors.R | 4 BAS-1.7.5/BAS/R/outliers.R | 4 BAS-1.7.5/BAS/R/plot.R | 4 BAS-1.7.5/BAS/R/plot_coef.R | 4 BAS-1.7.5/BAS/R/predict.R | 4 BAS-1.7.5/BAS/R/summary.R | 4 BAS-1.7.5/BAS/R/update.R | 4 BAS-1.7.5/BAS/README.md | 10 - BAS-1.7.5/BAS/build/partial.rdb |binary BAS-1.7.5/BAS/build/vignette.rds |binary BAS-1.7.5/BAS/inst/doc/BAS-vignette.R | 22 +-- BAS-1.7.5/BAS/inst/doc/BAS-vignette.html | 110 +++++++++--------- BAS-1.7.5/BAS/inst/figures |only BAS-1.7.5/BAS/inst/logo |only BAS-1.7.5/BAS/man/bas.lm.Rd | 41 +++++- BAS-1.7.5/BAS/man/figures/logo.png |only BAS-1.7.5/BAS/man/force.heredity.bas.Rd | 2 BAS-1.7.5/BAS/src/E_ZS.c | 5 BAS-1.7.5/BAS/src/MH-funs.c | 5 BAS-1.7.5/BAS/src/ZS_approx_full_np.c | 5 BAS-1.7.5/BAS/src/ZS_approx_null_np.c | 5 BAS-1.7.5/BAS/src/amcmc-funs.c | 5 BAS-1.7.5/BAS/src/bas.h | 7 - BAS-1.7.5/BAS/src/bayesglm.c | 5 BAS-1.7.5/BAS/src/bayesreg.c | 5 BAS-1.7.5/BAS/src/betapriorfamily.c | 5 BAS-1.7.5/BAS/src/cch.c | 5 BAS-1.7.5/BAS/src/family.c | 5 BAS-1.7.5/BAS/src/glm_deterministic.c | 5 BAS-1.7.5/BAS/src/glm_fit.c | 5 BAS-1.7.5/BAS/src/glm_lpy.c | 5 BAS-1.7.5/BAS/src/glm_mcmc.c | 5 BAS-1.7.5/BAS/src/glm_mcmcbas.c | 5 BAS-1.7.5/BAS/src/glm_sampleworep.c | 5 BAS-1.7.5/BAS/src/hg_approx_null_np.c | 5 BAS-1.7.5/BAS/src/hyp1F1.c | 48 +++++-- BAS-1.7.5/BAS/src/hyp2f1.c | 17 ++ BAS-1.7.5/BAS/src/init.c | 5 BAS-1.7.5/BAS/src/lm_amcmc.c | 5 BAS-1.7.5/BAS/src/lm_deterministic.c | 5 BAS-1.7.5/BAS/src/lm_mcmc.c | 5 BAS-1.7.5/BAS/src/lm_mcmcbas.c | 5 BAS-1.7.5/BAS/src/lm_sampleworep.c | 10 + BAS-1.7.5/BAS/src/model_probabilities.c | 12 + BAS-1.7.5/BAS/src/mtherr.c | 27 +++- BAS-1.7.5/BAS/src/tree_structures.c | 5 BAS-1.7.5/BAS/tests/testthat/Rplots.pdf |binary BAS-1.7.5/BAS/tests/testthat/test-bas-lm.R | 6 BAS-1.7.5/BAS/tests/testthat/test-interactions.R |only BAS-1.7.5/BAS/tests/testthat/test-priorprobs.R |only 73 files changed, 658 insertions(+), 191 deletions(-)
Title: Sudoku as an Experimental Design
Description: Sudoku designs (Bailey et al., 2008<doi:10.1080/00029890.2008.11920542>) can be used as experimental designs which tackle one extra source of variation than conventional Latin square designs. Although Sudoku designs are similar to Latin square designs, only addition is the region concept. Some very important functions related to row-column designs as well as block designs along with basic functions are included in this package.
Author: Ashutosh Dalal [aut, cre],
Cini Varghese [aut, ctb],
Rajender Parsad [aut, ctb],
Mohd Harun [aut, ctb]
Maintainer: Ashutosh Dalal <ashutosh.dalal97@gmail.com>
Diff between SudokuDesigns versions 1.0.0 dated 2024-10-31 and 1.1.0 dated 2024-11-28
SudokuDesigns-1.0.0/SudokuDesigns/R/Check_Replication_Matrix.R |only SudokuDesigns-1.0.0/SudokuDesigns/man/Check_Replication_Matrix.Rd |only SudokuDesigns-1.1.0/SudokuDesigns/DESCRIPTION | 6 - SudokuDesigns-1.1.0/SudokuDesigns/MD5 | 20 ++-- SudokuDesigns-1.1.0/SudokuDesigns/NAMESPACE | 4 SudokuDesigns-1.1.0/SudokuDesigns/R/Check_IBD.R | 2 SudokuDesigns-1.1.0/SudokuDesigns/R/Check_IRC.R | 4 SudokuDesigns-1.1.0/SudokuDesigns/R/Check_Replications.R |only SudokuDesigns-1.1.0/SudokuDesigns/R/Check_Sudoku_Design.R | 2 SudokuDesigns-1.1.0/SudokuDesigns/R/Get_Sudoku_I.R |only SudokuDesigns-1.1.0/SudokuDesigns/R/Get_Sudoku_II.R |only SudokuDesigns-1.1.0/SudokuDesigns/man/Check_IRC.Rd | 44 +++++----- SudokuDesigns-1.1.0/SudokuDesigns/man/Check_Replications.Rd |only SudokuDesigns-1.1.0/SudokuDesigns/man/Get_Sudoku_I.Rd |only SudokuDesigns-1.1.0/SudokuDesigns/man/Get_Sudoku_II.Rd |only 15 files changed, 44 insertions(+), 38 deletions(-)
Title: Graph Community Detection Methods into Systematic Conservation
Planning
Description: An innovative tool-set that incorporates graph community detection
methods into systematic conservation planning. It is designed to
enhance spatial prioritization by focusing on the protection of
areas with high ecological connectivity. Unlike traditional
approaches that prioritize individual planning units, 'priorCON'
focuses on clusters of features that exhibit strong ecological
linkages. The 'priorCON' package is built upon the 'prioritizr'
package <doi:10.32614/CRAN.package.prioritizr>, using commercial
and open-source exact algorithm solvers that ensure optimal
solutions to prioritization problems.
Author: Christos Adam [aut, cre] ,
Aggeliki Doxa [aut] ,
Nikolaos Nagkoulis [aut] ,
Maria Papazekou [aut] ,
Antonios D. Mazaris [aut] ,
Stelios Katsanevakis [aut]
Maintainer: Christos Adam <econp266@econ.soc.uoc.gr>
Diff between priorCON versions 0.1.2 dated 2024-11-06 and 0.1.3 dated 2024-11-28
DESCRIPTION | 27 ++++++++++++++++++++------- MD5 | 16 ++++++++-------- NEWS.md | 6 ++++++ README.md | 4 ++-- build/partial.rdb |binary build/vignette.rds |binary inst/doc/Introduction.Rmd | 3 ++- inst/doc/Introduction.html | 5 +++-- vignettes/Introduction.Rmd | 3 ++- 9 files changed, 43 insertions(+), 21 deletions(-)
Title: Helper Functions for 'mlr3'
Description: Frequently used helper functions and assertions used in
'mlr3' and its companion packages. Comes with helper functions for
functional programming, for printing, to work with 'data.table', as
well as some generally useful 'R6' classes. This package also
supersedes the package 'BBmisc'.
Author: Marc Becker [cre, aut] ,
Michel Lang [aut] ,
Patrick Schratz [aut]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3misc versions 0.15.1 dated 2024-06-24 and 0.16.0 dated 2024-11-28
mlr3misc-0.15.1/mlr3misc/R/dictionary_sugar_safe.R |only mlr3misc-0.15.1/mlr3misc/man/dictionary_sugar_get_safe.Rd |only mlr3misc-0.15.1/mlr3misc/man/dictionary_sugar_inc_get_safe.Rd |only mlr3misc-0.16.0/mlr3misc/DESCRIPTION | 44 ++--- mlr3misc-0.16.0/mlr3misc/MD5 | 29 +-- mlr3misc-0.16.0/mlr3misc/NAMESPACE | 4 mlr3misc-0.16.0/mlr3misc/NEWS.md | 6 mlr3misc-0.16.0/mlr3misc/R/Dictionary.R | 11 - mlr3misc-0.16.0/mlr3misc/R/crate.R | 2 mlr3misc-0.16.0/mlr3misc/R/dictionary_sugar.R | 40 ++-- mlr3misc-0.16.0/mlr3misc/R/did_you_mean.R | 87 +++++++++- mlr3misc-0.16.0/mlr3misc/R/require_namespaces.R | 2 mlr3misc-0.16.0/mlr3misc/man/crate.Rd | 2 mlr3misc-0.16.0/mlr3misc/man/dictionary_sugar_get.Rd | 10 - mlr3misc-0.16.0/mlr3misc/man/dictionary_sugar_inc_get.Rd | 11 - mlr3misc-0.16.0/mlr3misc/man/mlr3misc-package.Rd | 3 mlr3misc-0.16.0/mlr3misc/tests/testthat/test_Dictionary.R | 62 ++++--- 17 files changed, 212 insertions(+), 101 deletions(-)
Title: Statistical Tests of Familial Hypotheses
Description: Provides functionality for testing familial hypotheses. Supports testing centers
belonging to the Huber family. Testing is carried out using the Bayesian bootstrap. One- and
two-sample tests are supported, as are directional tests. Methods for visualizing output are
provided.
Author: Ryan Thompson [aut, cre]
Maintainer: Ryan Thompson <ryan.thompson-1@uts.edu.au>
Diff between familial versions 1.0.5 dated 2023-06-26 and 1.0.6 dated 2024-11-28
DESCRIPTION | 12 ++++++------ MD5 | 36 ++++++++++++++++++------------------ NEWS.md | 4 ++++ R/bayes-boot.R | 2 +- R/center-test.R | 11 +++++------ R/dirichlet.R | 2 +- R/fit-family.R | 2 +- R/weighted-stats.R | 2 +- build/vignette.rds |binary inst/CITATION | 7 +++++-- inst/doc/vignette.R | 2 +- inst/doc/vignette.html | 8 ++++---- man/bayes.boot.Rd | 2 +- man/center.test.Rd | 7 +++---- man/fit.family.Rd | 2 +- man/plot.center.test.Rd | 2 +- man/print.center.test.Rd | 2 +- man/rudirichlet.Rd | 2 +- man/weighted.Rd | 2 +- 19 files changed, 56 insertions(+), 51 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-03-01 0.1.0
Title: A 'shiny' App to Compare Two Data Frames
Description: A tool developed with the 'Golem' framework which provides
an easier way to check cells differences between two data
frames. The user provides two data frames for comparison,
selects IDs variables identifying each row of input data,
then clicks a button to perform the comparison. Several
'R' package functions are used to describe the data
and perform the comparison in the server of the
application. The main ones are comparedf() from 'arsenal'
and skim() from 'skimr'. For more details see the
description of comparedf() from the 'arsenal' package and
that of skim() from the 'skimr' package.
Author: Sergio Ewane Ebouele [aut, cre]
Maintainer: Sergio Ewane Ebouele <info@dataforknow.com>
Diff between dataCompare versions 1.0.4 dated 2024-11-21 and 1.0.5 dated 2024-11-28
DESCRIPTION | 6 - MD5 | 13 ++- NEWS.md | 30 +++++--- R/mod_comp_report.R | 134 ++++++++++++++++++++++------------------ R/mod_comp_report_fct_display.R | 21 +++--- R/mod_load_data.R | 2 R/template_content.R |only inst/doc/dataCompare.html | 44 ++++++------- 8 files changed, 140 insertions(+), 110 deletions(-)
Title: Computer Experiment Designs
Description: In computer experiments space-filling designs are having great impact. Most popularly used space-filling designs are Uniform designs (UDs), Latin hypercube designs (LHDs) etc. For further references one can see Mckay (1979) <DOI:10.1080/00401706.1979.10489755> and Fang (1980) <https://cir.nii.ac.jp/crid/1570291225616774784>. In this package, we have provided algorithms for generate efficient LHDs and UDs. Here, generated LHDs are efficient as they possess lower value of Maxpro measure, Phi_p value and Maximum Absolute Correlation (MAC) value based on the weightage given to each criterion. On the other hand, the produced UDs are having good space-filling property as they always attain the lower bound of Discrete Discrepancy measure. Further, some useful functions added in this package for adding more value to this package.
Author: Ashutosh Dalal [aut, cre],
Cini Varghese [aut, ctb],
Rajender Parsad [aut, ctb],
Mohd Harun [aut, ctb]
Maintainer: Ashutosh Dalal <ashutosh.dalal97@gmail.com>
Diff between CompExpDes versions 1.0.5 dated 2024-11-04 and 1.0.6 dated 2024-11-28
DESCRIPTION | 7 ++++--- MD5 | 14 ++++++++++---- NAMESPACE | 5 ++++- R/LHDs_I.R | 19 ++++++++++--------- R/LHDs_II.R | 9 ++++----- R/NOLHDs.R |only R/OLHDs_2F.R |only R/SLHDs.R |only man/NOLHDs.Rd |only man/OLHDs_2F.Rd |only man/SLHDs.Rd |only 11 files changed, 32 insertions(+), 22 deletions(-)
Title: Easily Compile and Call Inline 'C' Functions
Description: Compile inline 'C' code and easily call with
automatically generated wrapper functions. By allowing user-defined headers
and compilation flags (preprocessor, compiler and linking flags) the user
can configure optimization options and linking to third party
libraries. Multiple functions may be defined in a single block of code - which
may be defined in a string or a path to a source file.
Author: Mike Cheng [aut, cre, cph]
Maintainer: Mike Cheng <mikefc@coolbutuseless.com>
Diff between callme versions 0.1.10 dated 2024-07-27 and 0.1.11 dated 2024-11-28
callme-0.1.10/callme/man/cflags_default.Rd |only callme-0.1.11/callme/DESCRIPTION | 8 ++-- callme-0.1.11/callme/MD5 | 25 ++++++-------- callme-0.1.11/callme/NAMESPACE | 1 callme-0.1.11/callme/NEWS.md | 6 +++ callme-0.1.11/callme/R/compile.R | 14 -------- callme-0.1.11/callme/inst/doc/calling-r-from-c.R | 4 +- callme-0.1.11/callme/inst/doc/calling-r-from-c.html | 4 +- callme-0.1.11/callme/inst/doc/checking-for-interrupts.R | 4 +- callme-0.1.11/callme/inst/doc/data-frames.R | 10 ++--- callme-0.1.11/callme/inst/doc/external-pointers.html | 2 - callme-0.1.11/callme/inst/doc/introduction.R | 18 +++++----- callme-0.1.11/callme/inst/doc/third-party-libraries.R | 28 ++++++++-------- callme-0.1.11/callme/man/compile.Rd | 2 - 14 files changed, 59 insertions(+), 67 deletions(-)