Title: Statistical Methods for Psychologists
Description: Implements confidence interval and sample size methods that
are especially useful in psychological research. The methods can be
applied in 1-group, 2-group, paired-samples, and multiple-group designs
and to a variety of parameters including means, medians, proportions,
slopes, standardized mean differences, standardized linear contrasts
of means, plus several measures of correlation and association.
Confidence interval and sample size functions are given for single
parameters as well as differences, ratios, and linear contrasts of
parameters. The sample size functions can be used to approximate the
sample size needed to estimate a parameter or function of parameters
with desired confidence interval precision or to perform a variety of
hypothesis tests (directional two-sided, equivalence, superiority,
noninferiority) with desired power. For details see: Statistical Methods
for Psychologists, Volumes 1 – 4, <https://dgbonett.sites.ucsc.edu/>.
Author: Douglas G. Bonett [aut, cre],
Robert J. Calin-Jageman [ctb]
Maintainer: Douglas G. Bonett <dgbonett@ucsc.edu>
Diff between statpsych versions 1.6.0 dated 2024-07-08 and 1.7.0 dated 2024-12-18
DESCRIPTION | 27 + MD5 | 147 +++++----- NAMESPACE | 13 NEWS.md | 40 ++ R/statpsych1.R | 440 ++++++++++++++++++++---------- R/statpsych2.R | 488 ++++++++++++++++++++++++++++++---- R/statpsych3.R | 554 +++++++++++++++++++++++++++++++++------ build/partial.rdb |binary inst/REFERENCES.bib | 10 man/adj.se.Rd | 2 man/ci.2x2.mean.mixed.Rd | 16 - man/ci.2x2.median.bs.Rd | 2 man/ci.2x2.median.mixed.Rd | 26 - man/ci.2x2.median.ws.Rd | 24 - man/ci.2x2.stdmean.bs.Rd | 5 man/ci.2x2.stdmean.mixed.Rd | 36 +- man/ci.2x2.stdmean.ws.Rd | 1 man/ci.agree.Rd | 5 man/ci.bayes.cor.Rd |only man/ci.bayes.normal.Rd | 6 man/ci.bayes.prop.Rd | 8 man/ci.bayes.spcor.Rd |only man/ci.cor.Rd | 2 man/ci.cor2.gen.Rd | 4 man/ci.cramer.Rd | 7 man/ci.kappa.Rd | 8 man/ci.lc.gen.bs.Rd | 7 man/ci.lc.glm.Rd | 2 man/ci.lc.median.bs.Rd | 4 man/ci.median.Rd | 9 man/ci.median.ps.Rd | 15 - man/ci.median2.Rd | 11 man/ci.oddsratio.Rd | 4 man/ci.ratio.mad.ps.Rd | 2 man/ci.ratio.median.ps.Rd | 1 man/ci.ratio.median2.Rd | 3 man/ci.sign.Rd | 10 man/ci.tukey.Rd | 2 man/etasqr.adj.Rd | 2 man/etasqr.gen.2way.Rd | 2 man/expon.slope.Rd |only man/pi.cor.Rd | 33 +- man/pi.prop.Rd | 33 +- man/pi.var.Rd |only man/pi.var.upper.Rd | 3 man/power.cor2.Rd | 4 man/signal.Rd |only man/sim.ci.mean.Rd | 6 man/sim.ci.mean.ps.Rd | 2 man/sim.ci.mean2.Rd | 9 man/sim.ci.stdmean.ps.Rd | 2 man/size.ci.ancova2.Rd |only man/size.ci.biphi.Rd |only man/size.ci.cor.prior.Rd | 2 man/size.ci.mean.prior.Rd | 2 man/size.ci.mean2.Rd | 18 + man/size.ci.oddsratio.Rd |only man/size.ci.phi.Rd |only man/size.ci.prop2.Rd | 24 + man/size.ci.ratio.mean2.Rd | 8 man/size.ci.ratio.prop2.Rd | 22 + man/size.ci.slope.gen.Rd |only man/size.ci.stdmean2.Rd | 7 man/size.ci.yule.Rd |only man/size.test.ancova2.Rd |only man/size.test.cor2.Rd | 26 + man/size.test.lc.ancova.Rd | 2 man/size.test.lc.prop.bs.Rd | 10 man/size.test.mean2.Rd | 12 man/size.test.prop2.Rd | 15 - man/size.test.slope.gen.Rd |only man/test.cor.Rd | 5 man/test.cor2.Rd | 6 man/test.spear.Rd | 5 man/test.spear2.Rd | 5 tests/testthat/_snaps |only tests/testthat/test_statpsych1.R | 180 ++++++++++++ tests/testthat/test_statpsych2.R | 181 ++++++++++++ tests/testthat/test_statpsych3.R | 151 ++++++++++ tests/testthat/test_statpsych4.R | 14 80 files changed, 2174 insertions(+), 558 deletions(-)
Title: Hamiltonian Monte Carlo and Other Gradient-Based MCMC Sampling
Algorithms for 'nimble'
Description: Provides gradient-based MCMC sampling algorithms for use with the MCMC engine provided by the 'nimble' package. This includes two versions of Hamiltonian Monte Carlo (HMC) No-U-Turn (NUTS) sampling, and (under development) Langevin samplers. The `NUTS_classic` sampler implements the original HMC-NUTS algorithm as described in Hoffman and Gelman (2014) <doi:10.48550/arXiv.1111.4246>. The `NUTS` sampler is a modern version of HMC-NUTS sampling matching the HMC sampler available in version 2.32.2 of Stan (Stan Development Team, 2023). In addition, convenience functions are provided for generating and modifying MCMC configuration objects which employ HMC sampling.
Author: Daniel Turek [aut, cre],
Perry de Valpine [aut],
Christopher Paciorek [aut]
Maintainer: Daniel Turek <danielturek@gmail.com>
Diff between nimbleHMC versions 0.2.2 dated 2024-06-28 and 0.2.3 dated 2024-12-18
DESCRIPTION | 10 +++++----- MD5 | 6 +++--- R/HMC_samplers.R | 12 ++++++++---- inst/NEWS.md | 4 ++++ 4 files changed, 20 insertions(+), 12 deletions(-)
Title: Processing and Analysing Animal Trajectories
Description: Tools to handle, manipulate and explore trajectory data, with an emphasis on data from tracked animals. The package is designed to support large studies with several million location records and keep track of units where possible. Data import directly from 'movebank' <https://www.movebank.org/cms/movebank-main> and files is facilitated.
Author: Bart Kranstauber [aut, cre] ,
Kamran Safi [aut] ,
Anne K. Scharf [aut]
Maintainer: Bart Kranstauber <b.kranstauber@uva.nl>
Diff between move2 versions 0.4.0 dated 2024-12-09 and 0.4.2 dated 2024-12-18
DESCRIPTION | 6 MD5 | 46 - NEWS.md | 6 R/movebank_constants.R | 8 README.md | 11 inst/WORDLIST | 2 inst/doc/albatross.R | 20 inst/doc/albatross.Rmd | 18 inst/doc/albatross.html | 887 +++++++++++++++----------- inst/doc/convert.html | 248 ++++--- inst/doc/filtering_tracks.R | 2 inst/doc/filtering_tracks.Rmd | 2 inst/doc/filtering_tracks.html | 1095 ++++++++++++++++----------------- inst/doc/movebank.R | 42 - inst/doc/movebank.html | 1067 +++++++++++++++++--------------- inst/doc/programming_move2_object.html | 418 ++++++++---- inst/doc/trajectory_analysis.R | 19 inst/doc/trajectory_analysis.Rmd | 19 inst/doc/trajectory_analysis.html | 568 ++++++++--------- man/figures/README-deps-1.png |binary man/mt_filter_unique.Rd | 2 vignettes/albatross.Rmd | 18 vignettes/filtering_tracks.Rmd | 2 vignettes/trajectory_analysis.Rmd | 19 24 files changed, 2456 insertions(+), 2069 deletions(-)
Title: Miscellaneous Functions for the Analysis of Educational
Assessments
Description: Miscellaneous functions for data cleaning and data analysis of educational assessments. Includes functions for descriptive
analyses, character vector manipulations and weighted statistics. Mainly a lightweight dependency for the packages 'eatRep',
'eatGADS', 'eatPrep' and 'eatModel' (which will be subsequently submitted to 'CRAN').
The function for defining (weighted) contrasts in weighted effect coding refers to
te Grotenhuis et al. (2017) <doi:10.1007/s00038-016-0901-1>.
Functions for weighted statistics refer to
Wolter (2007) <doi:10.1007/978-0-387-35099-8>.
Author: Sebastian Weirich [aut, cre],
Martin Hecht [aut],
Karoline Sachse [aut],
Benjamin Becker [aut],
Nicole Mahler [aut],
Edna Grewers [ctb]
Maintainer: Sebastian Weirich <sebastian.weirich@iqb.hu-berlin.de>
Diff between eatTools versions 0.7.7 dated 2024-10-11 and 0.7.8 dated 2024-12-18
DESCRIPTION | 6 +++--- MD5 | 11 +++++++---- NAMESPACE | 4 ++++ NEWS.md | 6 +++++- R/cleanifyString.r |only man/cleanifyString.Rd |only tests/testthat/test_cleanifyString.R |only tests/testthat/test_remove_funs.R | 10 +++++----- 8 files changed, 24 insertions(+), 13 deletions(-)
Title: Utilities for Interacting with the 'Posit Connect' Server API
Description: Provides a helpful 'R6' class and methods for interacting with
the 'Posit Connect' Server API along with some meaningful utility functions
for regular tasks. API documentation varies by 'Posit Connect' installation
and version, but the latest documentation is also hosted publicly at
<https://docs.posit.co/connect/api/>.
Author: Toph Allen [aut, cre],
Neal Richardson [aut],
Sean Lopp [aut],
Cole Arendt [aut],
Posit, PBC [cph, fnd]
Maintainer: Toph Allen <toph@posit.co>
Diff between connectapi versions 0.4.0 dated 2024-11-08 and 0.5.0 dated 2024-12-18
connectapi-0.4.0/connectapi/man/jobs.Rd |only connectapi-0.5.0/connectapi/DESCRIPTION | 6 connectapi-0.5.0/connectapi/MD5 | 141 +++--- connectapi-0.5.0/connectapi/NAMESPACE | 4 connectapi-0.5.0/connectapi/NEWS.md | 31 + connectapi-0.5.0/connectapi/R/audits.R | 2 connectapi-0.5.0/connectapi/R/connect.R | 33 + connectapi-0.5.0/connectapi/R/connectapi.R | 1 connectapi-0.5.0/connectapi/R/content.R | 148 ++++++ connectapi-0.5.0/connectapi/R/get.R | 226 ++++------ connectapi-0.5.0/connectapi/R/groups.R |only connectapi-0.5.0/connectapi/R/parse.R | 17 connectapi-0.5.0/connectapi/R/ptype.R | 43 + connectapi-0.5.0/connectapi/R/utils.R | 20 connectapi-0.5.0/connectapi/R/variant.R | 5 connectapi-0.5.0/connectapi/inst/doc/customize-http.html | 4 connectapi-0.5.0/connectapi/inst/doc/getting-started.html | 4 connectapi-0.5.0/connectapi/inst/scratch |only connectapi-0.5.0/connectapi/man/Content.Rd | 20 connectapi-0.5.0/connectapi/man/ContentTask.Rd | 1 connectapi-0.5.0/connectapi/man/EnvironmentR6.Rd | 1 connectapi-0.5.0/connectapi/man/PositConnect.Rd | 41 + connectapi-0.5.0/connectapi/man/Vanity.Rd | 1 connectapi-0.5.0/connectapi/man/VariantR6.Rd | 1 connectapi-0.5.0/connectapi/man/VariantSchedule.Rd | 1 connectapi-0.5.0/connectapi/man/VariantTask.Rd | 1 connectapi-0.5.0/connectapi/man/content_delete.Rd | 2 connectapi-0.5.0/connectapi/man/content_item.Rd | 2 connectapi-0.5.0/connectapi/man/content_title.Rd | 2 connectapi-0.5.0/connectapi/man/content_update.Rd | 2 connectapi-0.5.0/connectapi/man/create_random_name.Rd | 2 connectapi-0.5.0/connectapi/man/dashboard_url.Rd | 2 connectapi-0.5.0/connectapi/man/dashboard_url_chr.Rd | 2 connectapi-0.5.0/connectapi/man/delete_thumbnail.Rd | 2 connectapi-0.5.0/connectapi/man/delete_vanity_url.Rd | 2 connectapi-0.5.0/connectapi/man/deploy_repo.Rd | 2 connectapi-0.5.0/connectapi/man/environment.Rd | 2 connectapi-0.5.0/connectapi/man/get_bundles.Rd | 4 connectapi-0.5.0/connectapi/man/get_group_content.Rd |only connectapi-0.5.0/connectapi/man/get_group_members.Rd | 10 connectapi-0.5.0/connectapi/man/get_groups.Rd | 8 connectapi-0.5.0/connectapi/man/get_image.Rd | 2 connectapi-0.5.0/connectapi/man/get_job.Rd |only connectapi-0.5.0/connectapi/man/get_jobs.Rd |only connectapi-0.5.0/connectapi/man/get_oauth_content_credentials.Rd |only connectapi-0.5.0/connectapi/man/get_thumbnail.Rd | 2 connectapi-0.5.0/connectapi/man/get_users.Rd | 27 + connectapi-0.5.0/connectapi/man/get_vanity_url.Rd | 2 connectapi-0.5.0/connectapi/man/get_vanity_urls.Rd |only connectapi-0.5.0/connectapi/man/git.Rd | 2 connectapi-0.5.0/connectapi/man/has_thumbnail.Rd | 2 connectapi-0.5.0/connectapi/man/permissions.Rd | 2 connectapi-0.5.0/connectapi/man/set_image.Rd | 2 connectapi-0.5.0/connectapi/man/set_run_as.Rd | 2 connectapi-0.5.0/connectapi/man/set_thumbnail.Rd | 2 connectapi-0.5.0/connectapi/man/set_vanity_url.Rd | 2 connectapi-0.5.0/connectapi/man/swap_vanity_url.Rd | 2 connectapi-0.5.0/connectapi/man/terminate_jobs.Rd |only connectapi-0.5.0/connectapi/man/verify_content_name.Rd | 4 connectapi-0.5.0/connectapi/tests/integrated/test-content.R | 9 connectapi-0.5.0/connectapi/tests/integrated/test-get.R | 8 connectapi-0.5.0/connectapi/tests/testthat/2024.07.0 |only connectapi-0.5.0/connectapi/tests/testthat/2024.08.0/__api__/v1/content/01234567/jobs.json |only connectapi-0.5.0/connectapi/tests/testthat/2024.08.0/__api__/v1/content/8f37d6e0/jobs |only connectapi-0.5.0/connectapi/tests/testthat/2024.08.0/__api__/v1/content/8f37d6e0/jobs.json |only connectapi-0.5.0/connectapi/tests/testthat/2024.08.0/__api__/v1/experimental |only connectapi-0.5.0/connectapi/tests/testthat/2024.08.0/__api__/v1/oauth/integrations/credentials-f08930-POST.json |only connectapi-0.5.0/connectapi/tests/testthat/2024.08.0/__api__/v1/oauth/integrations/credentials-fe6213-POST.json | 2 connectapi-0.5.0/connectapi/tests/testthat/Rplots.pdf |only connectapi-0.5.0/connectapi/tests/testthat/_snaps/groups.md |only connectapi-0.5.0/connectapi/tests/testthat/test-content.R | 83 +++ connectapi-0.5.0/connectapi/tests/testthat/test-get.R | 53 ++ connectapi-0.5.0/connectapi/tests/testthat/test-groups.R | 19 connectapi-0.5.0/connectapi/tests/testthat/test-oauth.R | 44 + connectapi-0.5.0/connectapi/tests/testthat/test-utils.R | 4 75 files changed, 842 insertions(+), 229 deletions(-)
Title: Statistical Significance of the Sharpe Ratio
Description: A collection of tools for analyzing significance of assets,
funds, and trading strategies, based on the Sharpe ratio and overfit
of the same. Provides density, distribution, quantile and random generation
of the Sharpe ratio distribution based on normal returns, as well
as the optimal Sharpe ratio over multiple assets. Computes confidence intervals
on the Sharpe and provides a test of equality of Sharpe ratios based on
the Delta method. The statistical foundations of the Sharpe can be found in
the author's Short Sharpe Course <doi:10.2139/ssrn.3036276>.
Author: Steven E. Pav [aut, cre]
Maintainer: Steven E. Pav <shabbychef@gmail.com>
Diff between SharpeR versions 1.3.0 dated 2021-08-18 and 1.4.0 dated 2024-12-18
ChangeLog | 7 ++ DESCRIPTION | 15 ++-- MD5 | 90 ++++++++++++++------------- NAMESPACE | 9 ++ R/SharpeR.r | 15 +++- R/data.r | 8 -- R/distributions.r | 4 - R/estimation.r | 128 +++++++++++++++++++++++++++++++++++++-- R/overoptimism.r |only R/sr.r | 7 +- R/sr_bias.r | 8 -- R/tests.r | 4 - R/unified.r | 4 - R/utils.r | 15 +++- README.md | 6 - build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 21 +++--- inst/doc/AsymptoticMarkowitz.pdf |binary inst/doc/SharpeR.pdf |binary inst/doc/SharpeRatio.pdf |binary man/NEWS.Rd | 10 +++ man/SharpeR.Rd | 12 +++ man/as.sr.Rd | 2 man/as.sropt.Rd | 4 - man/asnr_confint.Rd |only man/confint.Rd | 6 - man/dsr.Rd | 2 man/dsropt.Rd | 4 - man/inference.Rd | 9 ++ man/is.sr.Rd | 2 man/is.sropt.Rd | 4 - man/pco_sropt.Rd | 4 - man/plambdap.Rd | 2 man/power.sr_test.Rd | 2 man/power.sropt_test.Rd | 4 - man/predint.Rd | 2 man/print.Rd | 2 man/reannualize.Rd | 6 - man/se.Rd | 4 - man/sr_conditional_test.Rd |only man/sr_equality_test.Rd | 2 man/sr_max_test.Rd |only man/sr_test.Rd | 2 man/sr_unpaired_test.Rd | 2 man/sr_vcov.Rd | 2 man/sric.Rd | 1 man/summary.Rd | 4 - 48 files changed, 307 insertions(+), 128 deletions(-)
Title: Custom Visualizations & Functions for Streamlined Analyses of
Single Cell Sequencing
Description: Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using 'R'. 'scCustomize' aims to provide 1) Customized visualizations for aid in ease of use and to create more aesthetic and functional visuals. 2) Improve speed/reproducibility of common tasks/pieces of code in scRNA-seq analysis with a single or group of functions. For citation please use: Marsh SE (2021) "Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing" <doi:10.5281/zenodo.5706430> RRID:SCR_024675.
Author: Samuel Marsh [aut, cre] ,
Ming Tang [ctb],
Velina Kozareva [ctb],
Lucas Graybuck [ctb]
Maintainer: Samuel Marsh <samuel.marsh@childrens.harvard.edu>
Diff between scCustomize versions 3.0.0 dated 2024-12-05 and 3.0.1 dated 2024-12-18
DESCRIPTION | 8 - MD5 | 28 ++--- NEWS.md | 19 +++ R/Internal_Utilities.R | 157 +++++++++++++++++----------- R/Object_Utilities.R | 10 - R/Plotting_Seurat.R | 4 R/Plotting_Seurat_Iterative.R | 188 +++++++++++++++++++++++++++------- man/Iterate_Cluster_Highlight_Plot.Rd | 8 + man/Iterate_DimPlot_bySample.Rd | 6 + man/Iterate_FeaturePlot_scCustom.Rd | 6 + man/Iterate_Meta_Highlight_Plot.Rd | 8 + man/Iterate_Plot_Density_Custom.Rd | 6 + man/Iterate_Plot_Density_Joint.Rd | 6 + man/Iterate_VlnPlot_scCustom.Rd | 6 + man/Random_Cells_Downsample.Rd | 4 15 files changed, 336 insertions(+), 128 deletions(-)
Title: Enhancing the 'parallel' Package
Description: Utility functions that enhance the 'parallel' package and support the built-in parallel backends of the 'future' package. For example, availableCores() gives the number of CPU cores available to your R process as given by the operating system, 'cgroups' and Linux containers, R options, and environment variables, including those set by job schedulers on high-performance compute clusters. If none is set, it will fall back to parallel::detectCores(). Another example is makeClusterPSOCK(), which is backward compatible with parallel::makePSOCKcluster() while doing a better job in setting up remote cluster workers without the need for configuring the firewall to do port-forwarding to your local computer.
Author: Henrik Bengtsson [aut, cre, cph]
,
Mike Cheng [ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between parallelly versions 1.40.1 dated 2024-12-04 and 1.41.0 dated 2024-12-18
DESCRIPTION | 6 MD5 | 27 + NEWS.md | 26 + R/availableCores.R | 248 ++++++++++-------- R/availableWorkers.R | 412 +++++++++++++++++------------- R/launchNodePSOCK.R | 2 R/serializedSize.R | 2 R/utils,cluster.R | 8 inst/doc/parallelly-20-limit-workers.html | 39 ++ inst/doc/parallelly-20-limit-workers.md | 52 +++ man/availableCores.Rd | 11 man/serializedSize.Rd | 2 src/calc-serialized-size.c | 6 tests/utils,cluster.R |only vignettes/parallelly-20-limit-workers.md | 52 +++ 15 files changed, 584 insertions(+), 309 deletions(-)
Title: Creating Groups from Data
Description: Methods for dividing data into groups.
Create balanced partitions and cross-validation folds.
Perform time series windowing and general grouping and splitting of data.
Balance existing groups with up- and downsampling or collapse them to fewer groups.
Author: Ludvig Renbo Olsen [aut, cre]
Maintainer: Ludvig Renbo Olsen <r-pkgs@ludvigolsen.dk>
Diff between groupdata2 versions 2.0.3 dated 2023-06-18 and 2.0.5 dated 2024-12-18
groupdata2-2.0.3/groupdata2/build/groupdata2.pdf |only groupdata2-2.0.3/groupdata2/man/groupdata2.Rd |only groupdata2-2.0.5/groupdata2/DESCRIPTION | 13 groupdata2-2.0.5/groupdata2/MD5 | 60 groupdata2-2.0.5/groupdata2/NEWS.md | 8 groupdata2-2.0.5/groupdata2/R/all_groups_identical.R | 36 groupdata2-2.0.5/groupdata2/R/package_info.R | 4 groupdata2-2.0.5/groupdata2/R/table_of_content_markdown.R | 9 groupdata2-2.0.5/groupdata2/README.md | 4 groupdata2-2.0.5/groupdata2/build/stage23.rdb |only groupdata2-2.0.5/groupdata2/build/vignette.rds |binary groupdata2-2.0.5/groupdata2/inst/doc/automatic_groups_with_groupdata2.html | 142 +- groupdata2-2.0.5/groupdata2/inst/doc/cross-validation_with_groupdata2.html | 444 +++--- groupdata2-2.0.5/groupdata2/inst/doc/description_of_groupdata2.R | 10 groupdata2-2.0.5/groupdata2/inst/doc/description_of_groupdata2.html | 692 +++++----- groupdata2-2.0.5/groupdata2/inst/doc/introduction_to_groupdata2.html | 4 groupdata2-2.0.5/groupdata2/inst/doc/time_series_with_groupdata2.html | 164 +- groupdata2-2.0.5/groupdata2/man/all_groups_identical.Rd | 4 groupdata2-2.0.5/groupdata2/man/collapse_groups.Rd | 2 groupdata2-2.0.5/groupdata2/man/collapse_groups_by.Rd | 2 groupdata2-2.0.5/groupdata2/man/differs_from_previous.Rd | 4 groupdata2-2.0.5/groupdata2/man/find_missing_starts.Rd | 4 groupdata2-2.0.5/groupdata2/man/find_starts.Rd | 4 groupdata2-2.0.5/groupdata2/man/fold.Rd | 4 groupdata2-2.0.5/groupdata2/man/grapes-primes-grapes.Rd | 4 groupdata2-2.0.5/groupdata2/man/grapes-staircase-grapes.Rd | 4 groupdata2-2.0.5/groupdata2/man/group.Rd | 2 groupdata2-2.0.5/groupdata2/man/group_factor.Rd | 2 groupdata2-2.0.5/groupdata2/man/groupdata2-package.Rd |only groupdata2-2.0.5/groupdata2/man/partition.Rd | 4 groupdata2-2.0.5/groupdata2/man/render_toc.Rd | 10 groupdata2-2.0.5/groupdata2/man/splt.Rd | 4 groupdata2-2.0.5/groupdata2/tests/testthat/test_all_groups_identical.R | 21 33 files changed, 841 insertions(+), 824 deletions(-)
Title: Table Monster
Description: Provides a user friendly interface to
generation of booktab style tables using 'xtable'.
Author: Grant Izmirlian [aut, cre]
Maintainer: Grant Izmirlian <izmirlig@mail.nih.gov>
Diff between TableMonster versions 1.7 dated 2018-04-26 and 1.7.5 dated 2024-12-18
DESCRIPTION | 12 ++- MD5 | 16 +++- NAMESPACE | 5 - R/TableMonster.R | 166 +++++++++++++++++++++++++++++---------------------- man/basic.tmPrint.Rd |only man/concat.Rd |only man/tmCtypes.Rd | 4 - man/tmDisplay.Rd |only man/tmDisplayAssn.Rd |only man/tmTotals.Rd | 2 man/tmTotalsAssn.Rd | 2 11 files changed, 120 insertions(+), 87 deletions(-)
Title: Estimate Vapnik-Chervonenkis Dimension and Sample Complexity
Description: We provide a suite of tools for estimating the sample complexity of a chosen model through theoretical bounds and simulation. The package incorporates methods for estimating the Vapnik-Chervonenkis dimension (VCD) of a chosen algorithm, which can be used to estimate its sample complexity. Alternatively, we provide simulation methods to estimate sample complexity directly. For more details, see Carter, P & Choi, D (2024). "Learning from Noise: Applying Sample Complexity for Political Science Research" <doi:10.31219/osf.io/evrcj>.
Author: Perry Carter [aut, cre] ,
Dahyun Choi [aut]
Maintainer: Perry Carter <pjc504@nyu.edu>
Diff between scR versions 0.2.0 dated 2024-12-16 and 0.3.0 dated 2024-12-18
DESCRIPTION | 6 LICENSE | 4 MD5 | 22 - R/data.R | 22 - R/datagen.R | 106 ++++---- R/globals.R | 2 R/scR.R | 380 +++++++++++++++---------------- R/simulations.R | 644 +++++++++++++++++++++++++++-------------------------- man/acc_sim.Rd | 46 +-- man/br.Rd | 44 +-- man/loss.Rd | 60 ++-- man/risk_bounds.Rd | 38 +-- 12 files changed, 694 insertions(+), 680 deletions(-)
Title: Interface to 'MLflow'
Description: R interface to 'MLflow', open source platform for
the complete machine learning life cycle, see <https://mlflow.org/>.
This package supports installing 'MLflow', tracking experiments,
creating and running projects, and saving and serving models.
Author: Matei Zaharia [aut, cre],
Javier Luraschi [aut],
Kevin Kuo [aut] ,
RStudio [cph]
Maintainer: Matei Zaharia <matei@databricks.com>
Diff between mlflow versions 2.18.0 dated 2024-11-24 and 2.19.0 dated 2024-12-18
DESCRIPTION | 6 +++--- MD5 | 2 +- 2 files changed, 4 insertions(+), 4 deletions(-)
Title: Extremal Dependence Models
Description: A set of procedures for parametric and non-parametric modelling of the dependence structure of multivariate extreme-values is provided. The statistical inference is performed with non-parametric estimators, likelihood-based estimators and Bayesian techniques. It adapts the methodologies of Beranger and Padoan (2015) <doi:10.48550/arXiv.1508.05561>, Marcon et al. (2016) <doi:10.1214/16-EJS1162>, Marcon et al. (2017) <doi:10.1002/sta4.145>, Marcon et al. (2017) <doi:10.1016/j.jspi.2016.10.004> and Beranger et al. (2021) <doi:10.1007/s10687-019-00364-0>. This package also allows for the modelling of spatial extremes using flexible max-stable processes. It provides simulation algorithms and fitting procedures relying on the Stephenson-Tawn likelihood as per Beranger at al. (2021) <doi:10.1007/s10687-020-00376-1>.
Author: Boris Beranger [aut],
Simone Padoan [cre, aut],
Giulia Marcon [aut],
Steven G. Johnson [ctb] ,
Rudolf Schuerer [ctb] ,
Brian Gough [ctb] ,
Alec G. Stephenson [ctb],
Anne Sabourin [ctb] ,
Philippe Naveau [ctb]
Maintainer: Simone Padoan <simone.padoan@unibocconi.it>
Diff between ExtremalDep versions 0.0.4-3 dated 2024-12-12 and 0.0.4-4 dated 2024-12-18
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- NAMESPACE | 2 +- R/fExtDepSpat.R | 3 ++- R/plot_ExpDep.np.R | 2 ++ 5 files changed, 13 insertions(+), 10 deletions(-)
Title: Tidy Prediction and Plotting of Generalised Additive Models
Description: Provides functions that compute predictions from Generalised
Additive Models (GAMs) fitted with 'mgcv' and return them as a tibble.
These can be plotted with a generic plot()-method that uses 'ggplot2' or
plotted as any other data frame. The main function is predict_gam().
Author: Stefano Coretta [aut, cre]
Maintainer: Stefano Coretta <stefano.coretta@gmail.com>
Diff between tidygam versions 0.2.2 dated 2024-12-07 and 1.0.0 dated 2024-12-18
DESCRIPTION | 8 MD5 | 16 - NEWS.md | 19 ++ R/predict.R | 29 --- README.md | 7 inst/doc/get-started.R | 24 ++ inst/doc/get-started.Rmd | 31 ++- inst/doc/get-started.html | 430 +++++++++++++++++++++++++--------------------- vignettes/get-started.Rmd | 31 ++- 9 files changed, 349 insertions(+), 246 deletions(-)
Title: An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE)
Solvers
Description: Provides a way to call the functions in 'SUNDIALS' C ODE solving library (<https://computing.llnl.gov/projects/sundials>). Currently the serial version of ODE solver, 'CVODE', sensitivity calculator 'CVODES' and differential algebraic solver 'IDA' from the 'SUNDIALS' library are implemented. The package requires ODE to be written as an 'R' or 'Rcpp' function and does not require the 'SUNDIALS' library to be installed on the local machine.
Author: Satyaprakash Nayak [aut, cre, cph]
,
Lawrence Livermore National Security [cph],
Southern Methodist University [cph]
Maintainer: Satyaprakash Nayak <satyaprakash.nayak@gmail.com>
Diff between sundialr versions 0.1.6 dated 2024-12-14 and 0.1.6.1 dated 2024-12-18
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++------ cleanup | 4 ++-- inst/doc/my-vignette.html | 4 ++-- inst/include/sundials/sundials_config.h | 4 ++-- src/scripts/sundials_download.sh | 6 ++++++ tools/cmake_call.sh | 12 +++++++++++- 7 files changed, 33 insertions(+), 17 deletions(-)
Title: NASA POWER API Client
Description: An API client for NASA POWER global meteorology, surface
solar energy and climatology data API. POWER (Prediction Of Worldwide
Energy Resources) data are freely available for download with varying
spatial resolutions dependent on the original data and with several
temporal resolutions depending on the POWER parameter and community.
This work is funded through the NASA Earth Science Directorate Applied
Science Program. For more on the data themselves, the methodologies
used in creating, a web- based data viewer and web access, please see
<https://power.larc.nasa.gov/>.
Author: Adam H. Sparks [aut, cre] ,
Scott Chamberlain [rev] ,
Hazel Kavili [rev] ,
Alison Boyer [rev] ,
Fernando Miguez [ctb] ,
Maelle Salmon [ctb] ,
Phillip D. Alderman [ctb] ` must use `I` for literal data as of
vroom 1.5.0.', see
<https://github.com/ropen [...truncated...]
Maintainer: Adam H. Sparks <adamhsparks@gmail.com>
Diff between nasapower versions 4.2.1 dated 2024-05-17 and 4.2.2 dated 2024-12-18
DESCRIPTION | 10 MD5 | 72 - NEWS.md | 18 R/get_power.R | 521 +++++++------- R/internal_functions.R | 77 +- R/print_POWER_Info.R | 36 R/query_groupings.R | 10 R/query_parameters.R | 25 R/query_surfaces.R | 2 R/sysdata.rda |binary README.md | 386 ++++++++++ build/vignette.rds |binary inst/CITATION | 9 inst/WORDLIST | 1 inst/doc/nasapower.Rmd | 132 +-- inst/doc/nasapower.html | 201 ++--- man/get_power.Rd | 33 man/query_groupings.Rd | 2 man/query_parameters.Rd | 16 tests/fixtures/adjusted_air_pressure.json | 2 tests/fixtures/adjusted_wind_elevation.json | 2 tests/fixtures/climatology_ag_point.json | 2 tests/fixtures/daily_ag_point.json | 2 tests/fixtures/daily_sb_point_LST.json | 2 tests/fixtures/daily_sb_point_UTC.json | 2 tests/fixtures/query_groupings.json | 2 tests/fixtures/query_groupings_global.json | 2 tests/fixtures/query_parameters_comm&temporal_api.json | 2 tests/fixtures/query_surfaces_all.json | 2 tests/fixtures/query_surfaces_seaice.json | 2 tests/spelling.R | 11 tests/testthat/test-get_power.R | 329 ++++----- tests/testthat/test-internal_functions.R | 615 +++++++++-------- tests/testthat/test-query_groupings.R | 4 tests/testthat/test-query_parameters.R | 36 tests/testthat/test-query_surfaces.R | 7 vignettes/nasapower.Rmd | 132 +-- 37 files changed, 1649 insertions(+), 1058 deletions(-)
Title: Working with ISO8601 Dates and Times
Description: Functions to parse strings with ISO8601 dates, times, and
date-times into R-objects. Additionally, there are functions to determine
the type of ISO8601 string and to standardise ISO8601 strings.
Author: Jan van der Laan [aut, cre]
Maintainer: Jan van der Laan <r@eoos.dds.nl>
Diff between iso8601 versions 0.1.0 dated 2024-12-16 and 0.1.1 dated 2024-12-18
DESCRIPTION | 6 +++--- MD5 | 5 +++-- NEWS |only src/utils.cpp | 4 ++-- 4 files changed, 8 insertions(+), 7 deletions(-)
Title: Draw Network with Data
Description: Extends the 'ggplot2' plotting system to support network visualization. Inspired by the 'Method 1' in 'ggtree' (G Yu (2018) <doi:10.1093/molbev/msy194>), 'ggtangle' is designed to work with network associated data.
Author: Guangchuang Yu [aut, cre]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between ggtangle versions 0.0.5 dated 2024-11-29 and 0.0.6 dated 2024-12-18
DESCRIPTION | 10 +++++----- MD5 | 20 +++++++++++--------- NAMESPACE | 2 ++ NEWS.md | 6 ++++++ R/graph-layout.R |only R/graph.r | 3 ++- build/partial.rdb |only inst/doc/ggtangle.R | 6 +++--- inst/doc/ggtangle.Rmd | 6 +++--- inst/doc/ggtangle.html | 26 +++++++++++++------------- man/ggtangle-package.Rd | 2 +- vignettes/ggtangle.Rmd | 6 +++--- 12 files changed, 49 insertions(+), 38 deletions(-)
Title: Spatial Data Processing for Decision Making
Description: Methods for processing spatial data for decision-making.
This package is an R implementation of methods provided by the open source software GeoFIS <https://www.geofis.org> (Leroux et al. 2018) <doi:10.3390/agriculture8060073>.
The main functionalities are the management zone delineation (Pedroso et al. 2010) <doi:10.1016/j.compag.2009.10.007> and data aggregation (Mora-Herrera et al. 2020) <doi:10.1016/j.compag.2020.105624>.
Author: Serge Guillaume [aut],
Jean-Luc Lablee [aut, cre],
INRAE [cph]
Maintainer: Jean-Luc Lablee <jean-luc.lablee@inrae.fr>
Diff between GeoFIS versions 1.1.0 dated 2024-09-03 and 1.1.1 dated 2024-12-18
DESCRIPTION | 6 ++--- MD5 | 14 ++++++------ NEWS.md | 52 ++++++++++++++++++++++++--------------------- build/partial.rdb |binary build/vignette.rds |binary inst/doc/data-fusion.html | 2 - src/Makevars | 2 - src/util/address_equal.hpp | 13 +---------- 8 files changed, 42 insertions(+), 47 deletions(-)
Title: Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and
Destruction Rate Modelling
Description: Distributions that are typically used for exposure rating in
general insurance, in particular to price reinsurance contracts.
The vignette shows code snippets to fit the distribution to
empirical data. See, e.g., Bernegger (1997) <doi:10.2143/AST.27.1.563208>
freely available on-line.
Author: Christophe Dutang [aut, cre] ,
Giorgio Spedicato [aut] ,
Markus Gesmann [ctb]
Maintainer: Christophe Dutang <dutangc@gmail.com>
Diff between mbbefd versions 0.8.12 dated 2024-10-17 and 0.8.13 dated 2024-12-18
mbbefd-0.8.12/mbbefd/NEWS |only mbbefd-0.8.12/mbbefd/tests/check-formula-integral.R |only mbbefd-0.8.12/mbbefd/tests/check-formula-variance.R |only mbbefd-0.8.12/mbbefd/tests/test-mbbefd-1stparam.R |only mbbefd-0.8.12/mbbefd/tests/test-mbbefd-2ndparam.R |only mbbefd-0.8.13/mbbefd/DESCRIPTION | 6 mbbefd-0.8.13/mbbefd/MD5 | 29 +--- mbbefd-0.8.13/mbbefd/NAMESPACE | 12 - mbbefd-0.8.13/mbbefd/R/fitDR-output.R | 76 +++++++----- mbbefd-0.8.13/mbbefd/R/fitDR.R | 95 +++++++-------- mbbefd-0.8.13/mbbefd/R/util-loglikfunc.R | 41 +++++- mbbefd-0.8.13/mbbefd/README.md | 39 +++--- mbbefd-0.8.13/mbbefd/build/partial.rdb |binary mbbefd-0.8.13/mbbefd/build/vignette.rds |binary mbbefd-0.8.13/mbbefd/inst/NEWS.Rd | 36 +++-- mbbefd-0.8.13/mbbefd/inst/doc/Introduction_to_mbbefd.pdf |binary mbbefd-0.8.13/mbbefd/tests/test-fit-MBBEFDgb.R | 10 + mbbefd-0.8.13/mbbefd/tests/test-fit-mbbefd.R | 9 + 18 files changed, 218 insertions(+), 135 deletions(-)
Title: Simple Automatic Differentiation
Description: Handles both vector and matrices, using a flexible S4 class for automatic differentiation.
The method used is forward automatic differentiation. Many functions and methods have been defined,
so that in most cases, functions written without automatic differentiation in mind can be
used without change.
Author: Herve Perdry [aut, cre]
Maintainer: Herve Perdry <herve.perdry@universite-paris-saclay.fr>
Diff between salad versions 1.1 dated 2024-11-04 and 1.2 dated 2024-12-18
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS.md | 6 +++++- R/dual-math.r | 2 +- build/vignette.rds |binary inst/doc/salad.html | 6 +++--- 6 files changed, 18 insertions(+), 14 deletions(-)
Title: Optimize and Compress Image Files with 'reSmush.it'
Description: Compress local and online images using the 'reSmush.it' API
service <https://resmush.it/>.
Author: Diego Hernangomez [aut, cre, cph]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between resmush versions 0.2.0 dated 2024-07-19 and 0.2.1 dated 2024-12-18
DESCRIPTION | 8 - MD5 | 16 +-- NEWS.md | 4 R/resmush_clean_dir.R | 2 R/sysdata.rda |binary R/utils.R | 210 +++++++++++++++++++++++++------------------------- README.md | 20 ++-- build/vignette.rds |binary inst/schemaorg.json | 4 9 files changed, 135 insertions(+), 129 deletions(-)
Title: Get Executing Script's Path
Description: Determine the path of the executing script. Compatible
with several popular GUIs: 'Rgui', 'RStudio', 'Positron',
'VSCode', 'Jupyter', 'Emacs', and 'Rscript' (shell). Compatible
with several functions and packages: 'source()',
'sys.source()', 'debugSource()' in 'RStudio',
'compiler::loadcmp()', 'utils::Sweave()', 'box::use()',
'knitr::knit()', 'plumber::plumb()', 'shiny::runApp()',
'package:targets', and 'testthat::source_file()'.
Author: Iris Simmons [aut, cre]
Maintainer: Iris Simmons <ikwsimmo@gmail.com>
Diff between this.path versions 2.5.0 dated 2024-06-29 and 2.6.0 dated 2024-12-18
this.path-2.5.0/this.path/R/pathfuns.R |only this.path-2.5.0/this.path/man/path.functions.Rd |only this.path-2.6.0/this.path/DESCRIPTION | 30 this.path-2.6.0/this.path/MD5 | 117 +- this.path-2.6.0/this.path/NAMESPACE | 30 this.path-2.6.0/this.path/NEWS | 29 this.path-2.6.0/this.path/R/backports.R | 4 this.path-2.6.0/this.path/R/defunct.R | 41 - this.path-2.6.0/this.path/R/enhances.R | 87 +- this.path-2.6.0/this.path/R/error.R | 34 this.path-2.6.0/this.path/R/files.R | 56 - this.path-2.6.0/this.path/R/lineno.R | 6 this.path-2.6.0/this.path/R/make_fix_funs.R |only this.path-2.6.0/this.path/R/promises.R | 40 - this.path-2.6.0/this.path/R/relpath.R | 34 this.path-2.6.0/this.path/R/rprojroot.R | 2 this.path-2.6.0/this.path/R/thispath.R | 554 ++++++++------ this.path-2.6.0/this.path/R/utils.R | 8 this.path-2.6.0/this.path/R/zzz.R | 45 - this.path-2.6.0/this.path/README.md | 113 +- this.path-2.6.0/this.path/build/stage23.rdb |binary this.path-2.6.0/this.path/build/this.path.pdf |binary this.path-2.6.0/this.path/inst/NEWS.in.Rd | 36 this.path-2.6.0/this.path/man/Enhances.Rd | 11 this.path-2.6.0/this.path/man/check.path.Rd | 6 this.path-2.6.0/this.path/man/ext.Rd | 4 this.path-2.6.0/this.path/man/macros/macros.Rd | 5 this.path-2.6.0/this.path/man/make_fix_funs.Rd |only this.path-2.6.0/this.path/man/set.gui.path.Rd | 14 this.path-2.6.0/this.path/man/set.sys.path.Rd | 10 this.path-2.6.0/this.path/man/this.path-package.Rd | 10 this.path-2.6.0/this.path/man/this.path.Rd | 31 this.path-2.6.0/this.path/src/0.c | 8 this.path-2.6.0/this.path/src/backports.c | 3 this.path-2.6.0/this.path/src/backports.h | 13 this.path-2.6.0/this.path/src/devel.h | 15 this.path-2.6.0/this.path/src/error.c | 359 +++++++-- this.path-2.6.0/this.path/src/error.h | 47 - this.path-2.6.0/this.path/src/files.c | 99 ++ this.path-2.6.0/this.path/src/ns-hooks.c | 174 +++- this.path-2.6.0/this.path/src/ns-hooks.h | 6 this.path-2.6.0/this.path/src/pathjoin.c | 8 this.path-2.6.0/this.path/src/pathsplit.c | 19 this.path-2.6.0/this.path/src/print.c | 41 - this.path-2.6.0/this.path/src/progargs.c | 5 this.path-2.6.0/this.path/src/promises.c | 10 this.path-2.6.0/this.path/src/rgui_path.c | 20 this.path-2.6.0/this.path/src/setsyspath.c | 6 this.path-2.6.0/this.path/src/startup.c | 3 this.path-2.6.0/this.path/src/symbols.h | 3 this.path-2.6.0/this.path/src/this.path.h | 6 this.path-2.6.0/this.path/src/thispath.c | 197 ++-- this.path-2.6.0/this.path/src/thispathdefn.c | 44 - this.path-2.6.0/this.path/src/thispathdefn.h | 65 - this.path-2.6.0/this.path/src/utils.c | 102 ++ this.path-2.6.0/this.path/tests/ext-tests.R | 8 this.path-2.6.0/this.path/tests/faster-subsequent-times.R | 2 this.path-2.6.0/this.path/tests/package-box-supp |only this.path-2.6.0/this.path/tests/package-box-tests.R |only this.path-2.6.0/this.path/tools/configure.R | 13 this.path-2.6.0/this.path/tools/this_path_reg_ptrs.c | 10 61 files changed, 1756 insertions(+), 887 deletions(-)
Title: NHDPlus Tools
Description: Tools for traversing and working with National Hydrography Dataset Plus (NHDPlus) data. All methods implemented in 'nhdplusTools' are available in the NHDPlus documentation available from the US Environmental Protection Agency <https://www.epa.gov/waterdata/basic-information>.
Author: David Blodgett [aut, cre] ,
Mike Johnson [aut] ,
Marc Weber [ctb] ,
Josh Erickson [ctb],
Lauren Koenig [ctb]
Maintainer: David Blodgett <dblodgett@usgs.gov>
Diff between nhdplusTools versions 1.2.1 dated 2024-06-05 and 1.3.0 dated 2024-12-18
DESCRIPTION | 8 MD5 | 84 +-- NAMESPACE | 1 NEWS.md | 13 R/A_nhdplusTools.R | 16 R/arcrest_tools.R | 11 R/discover_nhdplus.R | 15 R/downloading_tools.R | 15 R/geoserver_tools.R | 2 R/get_hydro.R | 7 R/get_nhdplushr.R | 689 ++++++++++++++-------------- R/get_nldi.R | 49 + R/get_oaproc.R | 56 ++ R/plot_nhdplus.R | 4 build/partial.rdb |binary build/vignette.rds |binary inst/doc/get_3dhp_data.html | 24 inst/doc/get_data_overview.Rmd | 686 +++++++++++++-------------- inst/doc/get_data_overview.html | 57 +- inst/doc/indexing.html | 18 inst/doc/nhdplusTools.Rmd | 2 inst/doc/nhdplusTools.html | 150 +++--- inst/doc/nhdplushr.html | 18 inst/doc/plot_nhdplus.html | 60 +- inst/extdata/sample_data.R | 18 man/discover_nldi_characteristics.Rd | 11 man/download_nhdplushr.Rd | 10 man/get_3dhp.Rd | 6 man/get_huc.Rd | 2 man/get_nldi_characteristics.Rd | 14 man/get_split_catchment.Rd | 16 man/query_usgs_arcrest.Rd | 6 tests/testthat/helper.R | 11 tests/testthat/test_00_plot_local_nhdplus.R | 2 tests/testthat/test_00_plot_nhdplus.R | 434 ++++++++--------- tests/testthat/test_01_get_nldi.R | 641 +++++++++++++------------- tests/testthat/test_02_subset_extras.R | 6 tests/testthat/test_03_get_functions.R | 544 +++++++++++----------- tests/testthat/test_get_nhdplushr.R | 416 +++++++++------- tests/testthat/test_get_vaa.R | 7 tests/testthat/test_rescale_catchments.R | 12 vignettes/get_data_overview.Rmd | 686 +++++++++++++-------------- vignettes/nhdplusTools.Rmd | 2 43 files changed, 2548 insertions(+), 2281 deletions(-)
Title: Analyse Eye Data
Description: Enables the automation of actions across the pipeline, including
initial steps of transforming binocular data and gap repair to event-based
processing such as fixations, saccades, and entry/duration in Areas of
Interest (AOIs). It also offers visualisation of eye movement and AOI
entries. These tools take relatively raw (trial, time, x, and y form) data
and can be used to return fixations, saccades, and AOI entries and time spent
in AOIs. As the tools rely on this basic data format, the functions can work
with data from any eye tracking device. Implements fixation and saccade
detection using methods proposed by Salvucci and Goldberg (2000)
<doi:10.1145/355017.355028>.
Author: Tom Beesley [aut, cre],
Matthew Ivory [aut]
Maintainer: Tom Beesley <t.beesley@lancaster.ac.uk>
Diff between eyetools versions 0.7.2 dated 2024-10-28 and 0.8.0 dated 2024-12-18
eyetools-0.7.2/eyetools/R/hdf5_to_csv.R |only eyetools-0.7.2/eyetools/man/figures/unnamed-chunk-23-1.png |only eyetools-0.7.2/eyetools/man/figures/unnamed-chunk-24-1.png |only eyetools-0.7.2/eyetools/man/figures/unnamed-chunk-24-2.png |only eyetools-0.7.2/eyetools/man/figures/unnamed-chunk-26-3.png |only eyetools-0.7.2/eyetools/man/hdf5_to_csv.Rd |only eyetools-0.8.0/eyetools/DESCRIPTION | 22 eyetools-0.8.0/eyetools/MD5 | 88 + eyetools-0.8.0/eyetools/NAMESPACE | 10 eyetools-0.8.0/eyetools/NEWS.md | 25 eyetools-0.8.0/eyetools/R/AOI_seq.R | 135 +-- eyetools-0.8.0/eyetools/R/AOI_time.R | 25 eyetools-0.8.0/eyetools/R/AOI_time_binned.R |only eyetools-0.8.0/eyetools/R/check_ppt_n.R | 3 eyetools-0.8.0/eyetools/R/create_AOI_df.R |only eyetools-0.8.0/eyetools/R/estimate_sample_rate.R |only eyetools-0.8.0/eyetools/R/fixation_VTI.R | 13 eyetools-0.8.0/eyetools/R/fixation_dispersion.R | 20 eyetools-0.8.0/eyetools/R/hdf5_get_event.R |only eyetools-0.8.0/eyetools/R/hdf5_to_df.R |only eyetools-0.8.0/eyetools/R/interpolate.R | 43 eyetools-0.8.0/eyetools/R/plot_AOI_growth.R |only eyetools-0.8.0/eyetools/R/plot_heatmap.R |only eyetools-0.8.0/eyetools/R/plot_seq.R | 81 + eyetools-0.8.0/eyetools/R/plot_spatial.R | 84 + eyetools-0.8.0/eyetools/R/saccade_VTI.R | 9 eyetools-0.8.0/eyetools/R/smoother.R | 9 eyetools-0.8.0/eyetools/README.md | 41 eyetools-0.8.0/eyetools/data/HCL_AOIs.rda |binary eyetools-0.8.0/eyetools/inst/doc/eyetools.R | 52 - eyetools-0.8.0/eyetools/inst/doc/eyetools.Rmd | 79 + eyetools-0.8.0/eyetools/inst/doc/eyetools.html | 573 ++++++++----- eyetools-0.8.0/eyetools/man/AOI_seq.Rd | 17 eyetools-0.8.0/eyetools/man/AOI_time.Rd | 5 eyetools-0.8.0/eyetools/man/AOI_time_binned.Rd |only eyetools-0.8.0/eyetools/man/create_AOI_df.Rd |only eyetools-0.8.0/eyetools/man/eyetools-package.Rd | 4 eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-10-1.png |binary eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-18-1.png |binary eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-25-1.png |binary eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-26-1.png |binary eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-26-2.png |binary eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-27-1.png |binary eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-28-1.png |only eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-28-2.png |only eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-28-3.png |only eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-29-1.png |only eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-30-1.png |only eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-30-2.png |only eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-30-3.png |only eyetools-0.8.0/eyetools/man/figures/unnamed-chunk-9-1.png |binary eyetools-0.8.0/eyetools/man/hdf5_get_event.Rd |only eyetools-0.8.0/eyetools/man/hdf5_to_df.Rd |only eyetools-0.8.0/eyetools/man/interpolate.Rd | 9 eyetools-0.8.0/eyetools/man/plot_AOI_growth.Rd |only eyetools-0.8.0/eyetools/man/plot_heatmap.Rd |only eyetools-0.8.0/eyetools/man/plot_spatial.Rd | 2 eyetools-0.8.0/eyetools/vignettes/eyetools.Rmd | 79 + 58 files changed, 879 insertions(+), 549 deletions(-)
Title: Degrees of Freedom Adjustment for Robust Standard Errors
Description: Computes small-sample degrees of freedom adjustment for
heteroskedasticity robust standard errors, and for clustered standard errors
in linear regression. See Imbens and Kolesár (2016)
<doi:10.1162/REST_a_00552> for a discussion of these adjustments.
Author: Michal Kolesar [aut, cre, cph]
,
Kranz Sebastian [ctb]
Maintainer: Michal Kolesar <kolesarmi@googlemail.com>
Diff between dfadjust versions 1.0.5 dated 2023-10-04 and 1.1.0 dated 2024-12-18
DESCRIPTION | 25 ++++--- MD5 | 26 +++---- NEWS.md | 12 +++ R/ols.R | 76 ++++++++++++++-------- build/partial.rdb |binary build/vignette.rds |binary inst/WORDLIST | 1 inst/doc/dfadjust.R | 6 - inst/doc/dfadjust.Rmd | 6 - inst/doc/dfadjust.pdf |binary man/dfadjustSE.Rd | 20 +++--- tests/testthat/test-hc2-check.R | 129 ++++++++++++++++++++++----------------- tests/testthat/test_clustervar.R | 47 ++++++++++++++ vignettes/dfadjust.Rmd | 6 - 14 files changed, 230 insertions(+), 124 deletions(-)
Title: Add Inset Panels to Maps
Description: Helper to add insets based on geom_sf() from 'ggplot2'.
This package gives you a drop-in replacement for geom_sf() that supports
adding a zoomed inset map without having to create and embed a separate plot.
Author: Carl Suster [aut, cre] ,
Western Sydney Local Health District, NSW Health [cph]
Maintainer: Carl Suster <Carl.Suster@health.nsw.gov.au>
Diff between ggmapinset versions 0.3.0 dated 2023-04-28 and 0.4.0 dated 2024-12-18
DESCRIPTION | 15 +- LICENSE | 2 MD5 | 62 +++++---- NAMESPACE | 19 ++ NEWS.md | 9 + R/configure_inset.R | 174 +++++++++++++++----------- R/data.R |only R/geom_inset_frame.R | 154 +++++++++-------------- R/geom_sf_inset.R | 87 ++++++++----- R/geom_sf_text_inset.R | 56 ++++---- R/ggmapinset-package.R | 1 R/inset.R | 28 ++-- R/inset_shape_circle.R |only R/inset_shape_rectangle.R |only R/inset_shape_sf.R |only R/layer_helpers.R | 53 ++++---- R/stat_sf_coordinates_inset.R | 45 +++--- R/stat_sf_inset.R | 22 --- R/transform_to_inset.R | 6 README.md | 83 ++++++++++-- build/vignette.rds |binary data |only inst/COPYRIGHTS |only inst/doc/ggmapinset.R | 143 +++++++++++++++++++-- inst/doc/ggmapinset.Rmd | 186 ++++++++++++++++++++++++++-- inst/doc/ggmapinset.html | 256 ++++++++++++++++++++++++++++++++------- man/build_sf_inset_layers.Rd | 83 +++--------- man/configure_inset.Rd | 36 ++--- man/figures/README-example-1.png |binary man/geom_inset_frame.Rd | 25 +++ man/geom_sf_inset.Rd | 65 +-------- man/mozzies_nsw2301.Rd |only man/shape_circle.Rd |only man/shape_rectangle.Rd |only man/shape_sf.Rd |only man/stat_sf_coordinates_inset.Rd | 66 +++++++--- vignettes/ggmapinset.Rmd | 186 ++++++++++++++++++++++++++-- 37 files changed, 1283 insertions(+), 579 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-12-18 1.1.1
2021-03-20 1.1.0
2019-10-14 1.0.0