Title: Visualizing the Elements Within Bio-Sequences
Description: Visualizing the types and distribution of elements within
bio-sequences. At the same time, We have developed a geom layer,
geom_rrect(), that can generate rounded rectangles. No external references
are used in the development of this package.
Author: Shiqi Zhao [aut, cre, cph]
Maintainer: Shiqi Zhao <zhaosq89@163.com>
Diff between BioVizSeq versions 0.1.2 dated 2024-12-10 and 1.0.0 dated 2024-12-22
DESCRIPTION | 10 +++--- MD5 | 77 ++++++++++++++++++++++++++++++++++++++++++------- NAMESPACE | 2 + NEWS.md | 9 ++--- R/biovizseq.R |only R/combi_plot.R | 68 +++++++++++++++++++++++++++++++++---------- R/gff_plot.R | 4 +- R/globalvariables.R | 10 +++++- R/motif_plot.R | 10 ------ R/plantcare_plot.R | 4 +- R/smart_plot.R | 1 README.md |only inst/extdata/target.fa |only inst/shinyapp |only man/biovizseq.Rd |only man/combi_p.Rd | 17 ++++++++++ man/figures |only man/globalVariables.Rd | 2 - 18 files changed, 160 insertions(+), 54 deletions(-)
Title: Design Patterns in R
Description: Build robust and maintainable software with object-oriented design
patterns in R. Design patterns abstract and present in neat, well-defined
components and interfaces the experience of many software designers and
architects over many years of solving similar problems. These are solutions
that have withstood the test of time with respect to re-usability,
flexibility, and maintainability. 'R6P' provides abstract base classes with
examples for a few known design patterns. The patterns were selected by
their applicability to analytic projects in R. Using these patterns in R
projects have proven effective in dealing with the complexity that
data-driven applications possess.
Author: Harel Lustiger [aut, cre] ,
Tidylab [cph, fnd]
Maintainer: Harel Lustiger <tidylab@gmail.com>
Diff between R6P versions 0.3.0 dated 2022-10-02 and 0.4.0 dated 2024-12-22
R6P-0.3.0/R6P/R/utils-pipes.R |only R6P-0.3.0/R6P/R/utils.R |only R6P-0.3.0/R6P/man/pipes.Rd |only R6P-0.4.0/R6P/DESCRIPTION | 49 +- R6P-0.4.0/R6P/MD5 | 39 - R6P-0.4.0/R6P/NAMESPACE | 4 R6P-0.4.0/R6P/NEWS.md | 6 R6P-0.4.0/R6P/R/R6P-helpers.R | 43 + R6P-0.4.0/R6P/R/R6P-package.R |only R6P-0.4.0/R6P/R/base-NullObject.R | 12 R6P-0.4.0/R6P/R/base-Singleton.R | 82 +-- R6P-0.4.0/R6P/R/base-ValueObject.R | 71 +-- R6P-0.4.0/R6P/R/object_relational-Repository.R | 63 +- R6P-0.4.0/R6P/R/zzz.R | 29 - R6P-0.4.0/R6P/README.md | 58 -- R6P-0.4.0/R6P/man/NullObject.Rd | 101 ---- R6P-0.4.0/R6P/man/R6P-package.Rd |only R6P-0.4.0/R6P/man/Repository.Rd | 89 +-- R6P-0.4.0/R6P/man/Singleton.Rd | 61 -- R6P-0.4.0/R6P/man/ValueObject.Rd | 229 ---------- R6P-0.4.0/R6P/tests/testthat/helpers-xyz.R | 23 - R6P-0.4.0/R6P/tests/testthat/test-base-Singleton.R | 64 +- R6P-0.4.0/R6P/tests/testthat/test-object_relational-Repository.R | 14 23 files changed, 329 insertions(+), 708 deletions(-)
Title: Explore Your Data with Interactive Figures
Description: A framework for creating interactive figures for data exploration.
All plots are automatically linked and support several kinds of interactive features,
including selection, zooming, panning, and parameter manipulation. The figures
can be interacted with either manually, using a mouse and a keyboard,
or by running code from inside an active R session.
Author: Adam Bartonicek [aut, cre, cph]
Maintainer: Adam Bartonicek <bartonicek@gmail.com>
Diff between plotscaper versions 0.2.4 dated 2024-11-20 and 0.2.5 dated 2024-12-22
DESCRIPTION | 6 +-- MD5 | 18 ++++----- NEWS.md | 2 + build/vignette.rds |binary inst/doc/algebra.html | 10 ++--- inst/doc/available-interactions.html | 62 ++++++++++++++++---------------- inst/doc/layout.html | 14 +++---- inst/doc/performance.html | 6 +-- inst/doc/plotscaper.html | 14 +++---- inst/htmlwidgets/plotscape/main.iife.js | 2 - 10 files changed, 68 insertions(+), 66 deletions(-)
Title: Phytosanitary Calculator for Inspection Plans Based on Risks
Description: A 'Shiny' application for calculating phytosanitary inspection plans based on risks. It generates a diagram of pallets in a lot, highlights the units to be sampled, and documents them based on the selected sampling method (simple random or systematic sampling).
Author: Gustavo Ramirez-Valverde [aut, cre],
Luis Gabriel Otero-Prevost [aut],
Pedro Macias-Canales [ctb],
Juan A. Villanueva-Jimenez [ctb],
Jorge Luis Leyva-Vazquez [ctb]
Maintainer: Gustavo Ramirez-Valverde <gustavoramirezvalverde@gmail.com>
Diff between PhytosanitaryCalculator versions 1.1.1 dated 2024-05-30 and 1.1.3 dated 2024-12-22
DESCRIPTION | 26 - MD5 | 9 NAMESPACE | 2 R/phitosanitarycalculator.R | 801 ++++++++++++++++++++++++++------- R/www |only man/PhytosanitaryCalculator-package.Rd | 75 +-- 6 files changed, 716 insertions(+), 197 deletions(-)
More information about PhytosanitaryCalculator at CRAN
Permanent link
Title: Group Factor Analysis
Description: Several group factor analysis algorithms are implemented, including Canonical Correlation-based Estimation by Choi et al. (2021) <doi:10.1016/j.jeconom.2021.09.008> , Generalised Canonical Correlation Estimation by Lin and Shin (2023) <doi:10.2139/ssrn.4295429>, Circularly Projected Estimation by Chen (2022) <doi:10.1080/07350015.2022.2051520>, and Aggregated projection method.
Author: Jiaqi Hu [cre, aut],
Ting Li [aut],
Xueqin Wang [aut]
Maintainer: Jiaqi Hu <hujiaqi@mail.ustc.edu.cn>
Diff between GrFA versions 0.2 dated 2024-08-24 and 0.2.1 dated 2024-12-22
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- data/UShouseprice.rda |binary man/UShouseprice.Rd | 40 ++++++++++++++++++++++++++++++++++++++-- 4 files changed, 45 insertions(+), 9 deletions(-)
Title: Utilities for Fude Polygon
Description: Provides utilities to facilitate handling of Fude Polygon data
downloadable from the Ministry of Agriculture, Forestry and Fisheries
website <https://open.fude.maff.go.jp>.
Author: Takeshi Nishimura [aut, cph, cre]
Maintainer: Takeshi Nishimura <takenishi@gmail.com>
Diff between fude versions 0.3.6 dated 2024-05-18 and 0.3.7 dated 2024-12-22
fude-0.3.6/fude/R/zzz.R |only fude-0.3.6/fude/data/pref_table.rda |only fude-0.3.6/fude/man/figures/README-facet_wrap_gogoshima-1.png |only fude-0.3.6/fude/man/figures/README-facet_wrap_gogoshima_hist-1.png |only fude-0.3.6/fude/man/figures/README-gogoshima_with_minimap-1.png |only fude-0.3.6/fude/man/figures/README-matsuyama-1.png |only fude-0.3.6/fude/man/figures/README-sample-1.png |only fude-0.3.6/fude/man/figures/README-yawatahama-1.png |only fude-0.3.6/fude/man/figures/README-yusukawa-1.png |only fude-0.3.6/fude/man/pref_table.Rd |only fude-0.3.7/fude/DESCRIPTION | 14 fude-0.3.7/fude/MD5 | 63 - fude-0.3.7/fude/NAMESPACE | 3 fude-0.3.7/fude/NEWS.md | 6 fude-0.3.7/fude/R/bind_fude.R | 19 fude-0.3.7/fude/R/cite_fude.R |only fude-0.3.7/fude/R/combine_fude.R | 320 ++----- fude-0.3.7/fude/R/data.R | 36 fude-0.3.7/fude/R/extract_boundary.R |only fude-0.3.7/fude/R/extract_fude.R | 68 + fude-0.3.7/fude/R/get_boundary.R | 72 + fude-0.3.7/fude/R/ls_fude.R | 48 - fude-0.3.7/fude/R/read_fude.R | 170 +++- fude-0.3.7/fude/R/rename_fude.R | 8 fude-0.3.7/fude/R/shiny_fude.R |only fude-0.3.7/fude/README.md | 406 ++++------ fude-0.3.7/fude/data/community_code_table.rda |only fude-0.3.7/fude/data/pref_code_table.rda |only fude-0.3.7/fude/man/cite_fude.Rd |only fude-0.3.7/fude/man/combine_fude.Rd | 13 fude-0.3.7/fude/man/community_code_table.Rd |only fude-0.3.7/fude/man/extract_boundary.Rd |only fude-0.3.7/fude/man/extract_fude.Rd | 21 fude-0.3.7/fude/man/figures/README-gogoshima-1.png |binary fude-0.3.7/fude/man/figures/README-gogoshimafgb-1.png |only fude-0.3.7/fude/man/figures/README-nosplit_gogoshima-1.png |binary fude-0.3.7/fude/man/get_boundary.Rd | 18 fude-0.3.7/fude/man/lg_code_table.Rd | 10 fude-0.3.7/fude/man/ls_fude.Rd | 6 fude-0.3.7/fude/man/pref_code_table.Rd |only fude-0.3.7/fude/man/read_fude.Rd | 32 fude-0.3.7/fude/man/shiny_fude.Rd |only fude-0.3.7/fude/tests/testthat/test-extract_fude.R | 16 43 files changed, 684 insertions(+), 665 deletions(-)