Title: The 'epilogi' Variable Selection Algorithm for Continuous Data
Description: The 'epilogi' variable selection algorithm is implemented for the case of continuous response and predictor variables. The relevant paper is: Lakiotaki K., Papadovasilakis Z., Lagani V., Fafalios S., Charonyktakis P., Tsagris M. and Tsamardinos I. (2023). "Automated machine learning for Genome Wide Association Studies". Bioinformatics, 39(9): btad545. <doi:10.1093/bioinformatics/btad545>.
Author: Michail Tsagris [aut, cre]
Maintainer: Michail Tsagris <mtsagris@uoc.gr>
Diff between epilogi versions 1.1 dated 2024-09-10 and 1.2 dated 2024-12-23
DESCRIPTION | 11 ++++++----- MD5 | 8 ++++---- R/epilogi.R | 10 ++++------ man/epilogi-package.Rd | 6 +++--- man/epilogi.Rd | 7 +++++-- 5 files changed, 22 insertions(+), 20 deletions(-)
Title: Estimate Vapnik-Chervonenkis Dimension and Sample Complexity
Description: We provide a suite of tools for estimating the sample complexity of a chosen model through theoretical bounds and simulation. The package incorporates methods for estimating the Vapnik-Chervonenkis dimension (VCD) of a chosen algorithm, which can be used to estimate its sample complexity. Alternatively, we provide simulation methods to estimate sample complexity directly. For more details, see Carter, P & Choi, D (2024). "Learning from Noise: Applying Sample Complexity for Political Science Research" <doi:10.31219/osf.io/evrcj>.
Author: Perry Carter [aut, cre] ,
Dahyun Choi [aut]
Maintainer: Perry Carter <pjc504@nyu.edu>
Diff between scR versions 0.3.0 dated 2024-12-18 and 0.4.0 dated 2024-12-23
DESCRIPTION | 6 +- LICENSE | 4 - MD5 | 32 +++++++------- NAMESPACE | 1 R/data.R | 22 ++++----- R/datagen.R | 106 +++++++++++++++++++++++------------------------ R/globals.R | 2 R/scR.R | 9 ++- R/simulations.R | 52 +++++++++++++++-------- man/acc_sim.Rd | 81 +++++++++++++++++++++++++---------- man/br.Rd | 44 +++++++++---------- man/estimate_accuracy.Rd | 4 - man/getpac.Rd | 2 man/loss.Rd | 60 +++++++++++++------------- man/plot_accuracy.Rd | 2 man/risk_bounds.Rd | 38 ++++++++-------- man/simvcd.Rd | 3 + 17 files changed, 263 insertions(+), 205 deletions(-)
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Title: Procedures for Psychological, Psychometric, and Personality
Research
Description: A general purpose toolbox developed originally for personality, psychometric theory and experimental psychology. Functions are primarily for multivariate analysis and scale construction using factor analysis, principal component analysis, cluster analysis and reliability analysis, although others provide basic descriptive statistics. Item Response Theory is done using factor analysis of tetrachoric and polychoric correlations. Functions for analyzing data at multiple levels include within and between group statistics, including correlations and factor analysis. Validation and cross validation of scales developed using basic machine learning algorithms are provided, as are functions for simulating and testing particular item and test structures. Several functions serve as a useful front end for structural equation modeling. Graphical displays of path diagrams, including mediation models, factor analysis and structural equation models are created using basic graphics. Some of the fu [...truncated...]
Author: William Revelle [aut, cre]
Maintainer: William Revelle <revelle@northwestern.edu>
Diff between psych versions 2.4.6.26 dated 2024-06-27 and 2.4.12 dated 2024-12-23
DESCRIPTION | 12 +++--- MD5 | 60 ++++++++++++++++----------------- R/ICLUST.R | 15 ++++---- R/ICLUST.diagram.R | 2 - R/bestScale.R | 19 +++++----- R/cta.15.R | 2 - R/diagram.R | 14 ++++--- R/error.bars.by.R | 87 +++++++++++++++++++++++++++++------------------- R/fa.parallel.R | 12 +++--- R/reliability.R | 23 +++++++----- R/schmid.R | 2 - R/sim.hierarchical.R | 11 +++++- R/sim.structural.R | 5 +- R/thurstone.R | 2 - R/unidim.r | 21 +++++++++-- build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 2 - inst/NEWS.Rd | 38 ++++++++++++++++++-- inst/doc/scoring.pdf |binary man/ICLUST.Rd | 15 ++++++-- man/best.scales.Rd | 4 +- man/cta.Rd | 3 - man/error.bars.by.Rd | 2 - man/fa.Rd | 5 ++ man/factor.rotate.Rd | 2 - man/factor.scores.Rd | 2 - man/iclust.diagram.Rd | 5 ++ man/mediate.Rd | 2 - man/reliability.Rd | 17 ++++++--- man/sim.hierarchical.Rd | 6 ++- 31 files changed, 247 insertions(+), 143 deletions(-)
Title: Slide Automation for Tables, Listings and Figures
Description: The normal process of creating clinical study slides is that
a statistician manually type in the numbers from outputs and a
separate statistician to double check the typed in numbers. This
process is time consuming, resource intensive, and error prone.
Automatic slide generation is a solution to address these issues. It
reduces the amount of work and the required time when creating slides,
and reduces the risk of errors from manually typing or copying numbers
from the output to slides. It also helps users to avoid unnecessary
stress when creating large amounts of slide decks in a short time
window.
Author: Joe Zhu [cre, aut] ,
Heng Wang [aut],
Yinqi Zhao [aut],
Bo Ci [aut],
Liming Li [aut],
Laura Wang [ctb],
Xiaoli Duan [aut],
Stefan Pascal Thoma [aut],
Thomas Neitmann [ctb],
Miles Almond [aut],
Mahdi About [ctb],
Kai Lim [ctb],
Nolan Steed [ctb],
Daol [...truncated...]
Maintainer: Joe Zhu <joe.zhu@roche.com>
Diff between autoslider.core versions 0.1.0 dated 2024-11-27 and 0.2.1 dated 2024-12-23
DESCRIPTION | 50 +++--- MD5 | 95 ++++++++--- NAMESPACE | 31 +-- NEWS.md | 17 ++ R/assert.R | 14 + R/decorate.R | 28 +-- R/ft_formats.R | 35 ---- R/g_mean_slides.R |only R/helper_functions.R | 2 R/l_ae_slide.R |only R/null_report.R | 2 R/package.R | 16 -- R/t_ae_pt_diff_slide.R | 4 R/t_ae_slide.R | 4 R/t_ae_summary_slide.R | 12 - R/t_aesi_slide.R | 41 ++--- R/t_dd_slide.R | 2 R/t_dm_slide.R | 2 R/t_ds_slide.R |only R/to_ft_funs.R | 83 +--------- R/to_slides.R | 3 R/util.R | 26 +-- README.md | 34 +++- build |only inst/WORDLIST | 29 +++ inst/bad_filters.yml |only inst/doc |only inst/filters.yml | 15 + inst/spec.yml | 23 ++ man/autoslider.core-package.Rd | 2 man/autoslider_format.Rd | 10 - man/g_eg_slide.Rd |only man/g_lb_slide.Rd |only man/g_mean_general.Rd |only man/g_vs_slide.Rd |only man/l_ae_slide.Rd |only man/null_report.Rd | 2 man/t_ds_slide.Rd |only tests/testthat/_snaps/filter_spec-verbose.md |only tests/testthat/_snaps/format_date.md |only tests/testthat/_snaps/helper_functions.md |only tests/testthat/_snaps/l_ae_slide.md |only tests/testthat/_snaps/slides_preview.md |only tests/testthat/_snaps/t_ae_slide.md |only tests/testthat/_snaps/t_ae_summary_slide.md |only tests/testthat/_snaps/t_aesi_slide.md |only tests/testthat/_snaps/t_dm_slide.md | 216 +++++++++++++-------------- tests/testthat/_snaps/t_ds_slide.md |only tests/testthat/setup.R | 2 tests/testthat/t_dm_output.rds |only tests/testthat/test-bad_filters.R |only tests/testthat/test-filter_spec-verbose.R |only tests/testthat/test-formats.R |only tests/testthat/test-g_mean_slides.R |only tests/testthat/test-helper_functions.R |only tests/testthat/test-l_ae_slide.R |only tests/testthat/test-output-table-format.R |only tests/testthat/test-slides_preview.R |only tests/testthat/test-srep_outputs.R |only tests/testthat/test-t_ae_slide.R |only tests/testthat/test-t_ae_summary_slide.R |only tests/testthat/test-t_aesi_slide.R |only tests/testthat/test-t_dm_slide.R | 10 - tests/testthat/test-t_ds_slide.R |only tests/testthat/test_format_date.R |only vignettes |only 66 files changed, 416 insertions(+), 394 deletions(-)
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