Title: Load US Census Boundary and Attribute Data as 'tidyverse' and
'sf'-Ready Data Frames
Description: An integrated R interface to several United States Census Bureau
APIs (<https://www.census.gov/data/developers/data-sets.html>) and the US Census Bureau's
geographic boundary files. Allows R users to return Census and ACS data as
tidyverse-ready data frames, and optionally returns a list-column with feature geometry for mapping
and spatial analysis.
Author: Kyle Walker [aut, cre],
Matt Herman [aut],
Kris Eberwein [ctb]
Maintainer: Kyle Walker <kyle@walker-data.com>
Diff between tidycensus versions 1.7.0 dated 2025-01-23 and 1.7.1 dated 2025-01-31
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/pums.R | 15 +++++++++++---- data/pums_variables.rda |binary man/pums_variables.Rd | 2 +- 5 files changed, 20 insertions(+), 13 deletions(-)
Title: Statistical Functions for the
Maxwell-Boltzmann-Bose-Einstein-Fermi-Dirac (MBBEFD) Family of
Distributions
Description: Provides probability mass, distribution, quantile, random variate
generation, and method-of-moments parameter fitting for the MBBEFD family of
distributions used in insurance modeling as described in Bernegger (1997)
<doi:10.2143/AST.27.1.563208> without any external dependencies.
Author: Avraham Adler [aut, cre, cph]
Maintainer: Avraham Adler <Avraham.Adler@gmail.com>
Diff between MBBEFDLite versions 0.0.4 dated 2024-07-24 and 0.0.5 dated 2025-01-31
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ R/mom.R | 8 +++++--- build/partial.rdb |binary inst/CITATION | 2 +- inst/NEWS.Rd | 15 +++++++++++++++ inst/tinytest/test_package_metadata.R | 4 ++-- 7 files changed, 32 insertions(+), 15 deletions(-)
Title: Construct Modeling Packages
Description: Building modeling packages is hard. A large amount of effort
generally goes into providing an implementation for a new method that
is efficient, fast, and correct, but often less emphasis is put on the
user interface. A good interface requires specialized knowledge about
S3 methods and formulas, which the average package developer might not
have. The goal of 'hardhat' is to reduce the burden around building
new modeling packages by providing functionality for preprocessing,
predicting, and validating input.
Author: Hannah Frick [aut, cre] ,
Davis Vaughan [aut],
Max Kuhn [aut],
Posit Software, PBC [cph, fnd]
Maintainer: Hannah Frick <hannah@posit.co>
Diff between hardhat versions 1.4.0 dated 2024-06-02 and 1.4.1 dated 2025-01-31
DESCRIPTION | 12 MD5 | 218 +++--- NAMESPACE | 14 NEWS.md | 8 R/blueprint-formula-default.R | 137 ++- R/blueprint-recipe-default.R | 107 +- R/blueprint-xy-default.R | 78 +- R/blueprint.R | 7 R/case-weights.R | 10 R/classes.R | 9 R/constructor.R | 19 R/encoding.R | 4 R/extract.R | 4 R/forge.R | 7 R/hardhat-package.R | 2 R/import-standalone-obj-type.R | 29 R/import-standalone-types-check.R | 20 R/intercept.R | 28 R/model-frame.R | 9 R/model-matrix.R | 38 - R/model-offset.R | 19 R/mold.R | 10 R/print.R | 29 R/ptype.R | 8 R/quantile-pred.R |only R/recompose.R | 24 R/scream.R | 23 R/shrink.R | 10 R/sparsevctrs.R |only R/spruce.R | 6 R/standardize.R | 20 R/table.R | 10 R/tune.R | 9 R/use.R | 12 R/util.R | 45 - R/validation.R | 182 ++--- README.md | 2 build/vignette.rds |binary inst/doc/forge.R | 15 inst/doc/forge.Rmd | 9 inst/doc/forge.html | 348 ++++----- inst/doc/mold.R | 11 inst/doc/mold.Rmd | 9 inst/doc/mold.html | 470 ++++++------- inst/doc/package.R | 15 inst/doc/package.Rmd | 9 inst/doc/package.html | 756 ++++++++++----------- man/add_intercept_column.Rd | 6 man/check_quantile_levels.Rd |only man/contr_one_hot.Rd | 71 + man/default_recipe_blueprint.Rd | 4 man/extract_ptype.Rd | 6 man/get_data_classes.Rd | 6 man/model_frame.Rd | 6 man/model_matrix.Rd | 6 man/model_offset.Rd | 6 man/mold.Rd | 4 man/quantile_pred.Rd |only man/recompose.Rd | 4 man/rmd |only man/run-forge.Rd | 8 man/run-mold.Rd | 8 man/scream.Rd | 6 man/shrink.Rd | 6 man/tune.Rd | 2 man/validate_column_names.Rd | 6 man/validate_outcomes_are_binary.Rd | 6 man/validate_outcomes_are_factors.Rd | 6 man/validate_outcomes_are_numeric.Rd | 6 man/validate_prediction_size.Rd | 6 man/validate_predictors_are_numeric.Rd | 6 tests/testthat/_snaps/blueprint-formula-default.md |only tests/testthat/_snaps/blueprint.md |only tests/testthat/_snaps/constructor.md | 30 tests/testthat/_snaps/encoding.md | 2 tests/testthat/_snaps/forge-formula.md | 116 ++- tests/testthat/_snaps/forge-recipe.md | 63 + tests/testthat/_snaps/forge-xy.md | 85 ++ tests/testthat/_snaps/forge.md | 2 tests/testthat/_snaps/intercept.md | 11 tests/testthat/_snaps/levels.md |only tests/testthat/_snaps/model-matrix.md |only tests/testthat/_snaps/model-offset.md |only tests/testthat/_snaps/mold-formula.md | 155 +++- tests/testthat/_snaps/mold-recipe.md |only tests/testthat/_snaps/mold.md | 2 tests/testthat/_snaps/print.md | 68 - tests/testthat/_snaps/quantile-pred.md |only tests/testthat/_snaps/recompose.md | 10 tests/testthat/_snaps/spruce.md | 72 ++ tests/testthat/_snaps/standardize.md | 34 tests/testthat/_snaps/table.md | 4 tests/testthat/_snaps/tune.md |only tests/testthat/_snaps/use.md | 4 tests/testthat/_snaps/validation.md |only tests/testthat/helper-sparsevctrs.R |only tests/testthat/test-blueprint-formula-default.R |only tests/testthat/test-blueprint.R |only tests/testthat/test-constructor.R | 11 tests/testthat/test-forge-formula.R | 118 +-- tests/testthat/test-forge-recipe.R | 133 ++- tests/testthat/test-forge-xy.R | 110 +-- tests/testthat/test-intercept.R | 6 tests/testthat/test-levels.R | 6 tests/testthat/test-model-matrix.R | 35 tests/testthat/test-model-offset.R | 12 tests/testthat/test-mold-formula.R | 108 +-- tests/testthat/test-mold-recipe.R | 52 + tests/testthat/test-print.R | 2 tests/testthat/test-quantile-pred.R |only tests/testthat/test-recompose.R | 65 + tests/testthat/test-spruce.R | 37 - tests/testthat/test-standardize.R | 10 tests/testthat/test-tune.R | 6 tests/testthat/test-use.R | 6 tests/testthat/test-validation.R | 78 +- vignettes/forge.Rmd | 9 vignettes/mold.Rmd | 9 vignettes/package.Rmd | 9 119 files changed, 2756 insertions(+), 1720 deletions(-)
More information about ggsurveillance at CRAN
Permanent link
Title: Plotting Expected Goals (xG) Stats with 'Understat' Data
Description: Scrapes shots data from 'Understat' <https://understat.com/> and visualizes it using interactive plots:
- A detailed shot map displaying the location, type, and xG value of shots taken by both teams.
- An xG timeline chart showing the cumulative xG for each team over time, annotated with the details of scored goals.
Author: Aymen Nasri [aut, cre, cph]
Maintainer: Aymen Nasri <aymennasrii@proton.me>
Diff between ggfootball versions 0.1.0 dated 2025-01-30 and 0.2.0 dated 2025-01-31
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS.md | 19 ++++++++++++++----- R/xg_chart.R | 13 +++++++------ R/xg_map.R | 4 ++-- README.md | 10 ++++++---- man/xg_chart.Rd | 17 ++++++++++------- man/xg_map.Rd | 6 +++--- 8 files changed, 53 insertions(+), 38 deletions(-)
Title: Generator of Main Scientific References
Description: Generates a list, with a size defined by the user, containing the main scientific references and the frequency distribution of authors and journals in the list obtained.
The database is a dataframe with academic production metadata made available by bibliographic collections such as Scopus, Web of Science, etc.
The temporal evolution of scientific production on a given topic is presented and ordered lists of articles are constructed by number of citations and of authors and journals by level of productivity.
Massimo Aria, Corrado Cuccurullo. (2017) <doi:10.1016/j.joi.2017.08.007>.
Caibo Zhou, Wenyan Song. (2021) <doi:10.1016/j.jclepro.2021.126943>.
Author: Marcio Eustaquio [aut, cre]
Maintainer: Marcio Eustaquio <marcioeustaquio@id.uff.br>
Diff between bibliorefer versions 0.1.0 dated 2024-03-08 and 0.1.1 dated 2025-01-31
DESCRIPTION | 6 +++--- MD5 | 12 +++++++----- NAMESPACE | 1 + R/ajust_pagin.R |only R/crit_quant.R | 2 +- R/principal_lister.R | 30 ++++++++++++++++++++++-------- man/ajust_pagin.Rd |only man/crit_quant.Rd | 2 +- 8 files changed, 35 insertions(+), 18 deletions(-)
Title: Tests of Independence Between Innovations of Generalized Error
Models
Description: Computation of test statistics of independence between (continuous) innovations of time series. They can be used with stochastic volatility models and Hidden Markov Models (HMM). This improves the results in Duchesne, Ghoudi & Remillard (2012) <doi:10.1002/cjs.11141>.
Author: Kilani Ghoudi [aut, ctb, cph],
Bouchra R. Nasri [aut, ctb, cph],
Bruno N Remillard [aut, cre, cph],
Pierre Duchesne [aut, ctb, cph]
Maintainer: Bruno N Remillard <bruno.remillard@hec.ca>
Diff between IndGenErrors versions 0.1.4 dated 2023-06-30 and 0.1.6 dated 2025-01-31
IndGenErrors-0.1.4/IndGenErrors/R/Dependogram.R |only IndGenErrors-0.1.4/IndGenErrors/man/Dependogram.Rd |only IndGenErrors-0.1.6/IndGenErrors/DESCRIPTION | 16 +++--- IndGenErrors-0.1.6/IndGenErrors/MD5 | 26 ++++++----- IndGenErrors-0.1.6/IndGenErrors/NAMESPACE | 8 ++- IndGenErrors-0.1.6/IndGenErrors/R/CrossCorrelogram.R | 2 IndGenErrors-0.1.6/IndGenErrors/R/crosscor_3series.R | 16 ++---- IndGenErrors-0.1.6/IndGenErrors/R/crossdep_2series.R |only IndGenErrors-0.1.6/IndGenErrors/R/crossdep_3series.R |only IndGenErrors-0.1.6/IndGenErrors/R/cvm_2series.R | 2 IndGenErrors-0.1.6/IndGenErrors/R/cvm_3series.R | 9 --- IndGenErrors-0.1.6/IndGenErrors/R/dependogram.R |only IndGenErrors-0.1.6/IndGenErrors/man/CrossCorrelogram.Rd | 7 ++ IndGenErrors-0.1.6/IndGenErrors/man/crosscor_3series.Rd | 6 +- IndGenErrors-0.1.6/IndGenErrors/man/crossdep_2series.Rd |only IndGenErrors-0.1.6/IndGenErrors/man/crossdep_3series.Rd |only IndGenErrors-0.1.6/IndGenErrors/man/dependogram.Rd |only IndGenErrors-0.1.6/IndGenErrors/src/calcul_cvm_crosscor_3d.c | 3 - 18 files changed, 49 insertions(+), 46 deletions(-)
Title: Analysis of Intra Annual Density Fluctuations
Description: Calculate false ring proportions from data frames of intra annual
density fluctuations.
Author: Konrad Mayer [aut, cre],
Filipe Campelo [aut]
Maintainer: Konrad Mayer <konrad.mayer@gmail.com>
Diff between iadf versions 0.1.2 dated 2021-05-24 and 0.1.3 dated 2025-01-31
DESCRIPTION | 8 - MD5 | 18 +- NAMESPACE | 1 NEWS.md | 4 R/false_ring_proportion.R | 231 ++++++++++--------------------------- R/tidy.R | 9 - README.md | 28 ++-- build/vignette.rds |binary inst/doc/falsering-proportion.R | 24 +-- inst/doc/falsering-proportion.html | 98 +++++++++------ 10 files changed, 178 insertions(+), 243 deletions(-)
Title: Optimal Subset Selection for Transformation Models
Description: Greedy optimal subset selection for transformation models
(Hothorn et al., 2018, <doi:10.1111/sjos.12291> ) based on the abess
algorithm (Zhu et al., 2020, <doi:10.1073/pnas.2014241117> ). Applicable to
models from packages 'tram' and 'cotram'. Application to shift-scale
transformation models are described in Siegfried et al. (2024,
<doi:10.1080/00031305.2023.2203177>).
Author: Lucas Kook [aut, cre] ,
Sandra Siegfried [ctb],
Torsten Hothorn [ctb]
Maintainer: Lucas Kook <lucasheinrich.kook@gmail.com>
Diff between tramvs versions 0.0-6 dated 2024-09-04 and 0.0-7 dated 2025-01-31
DESCRIPTION | 17 ++++--- MD5 | 8 +-- R/tramvs.R | 115 +++++++++++++++++++++++++++++++++------------------- build/vignette.rds |binary inst/doc/tramvs.pdf |binary 5 files changed, 87 insertions(+), 53 deletions(-)
Title: Functions for Epidemiological Analysis using Population Data
Description: Enables computation of epidemiological statistics, including
those where counts or mortality rates of the reference population are
used. Currently supported: excess hazard models (Dickman, Sloggett,
Hills, and Hakulinen (2012) <doi:10.1002/sim.1597>), rates, mean
survival times, relative/net survival (in particular the Ederer II
(Ederer and Heise (1959)) and Pohar Perme (Pohar Perme, Stare, and
Esteve (2012) <doi:10.1111/j.1541-0420.2011.01640.x>) estimators), and
standardized incidence and mortality ratios, all of which can be
easily adjusted for by covariates such as age. Fast splitting and
aggregation of 'Lexis' objects (from package 'Epi') and other
computations achieved using 'data.table'.
Author: Joonas Miettinen [cre, aut] ,
Matti Rantanen [aut],
Karri Seppa [ctb]
Maintainer: Joonas Miettinen <joonas.miettinen@cancer.fi>
Diff between popEpi versions 0.4.12 dated 2024-05-10 and 0.4.13 dated 2025-01-31
DESCRIPTION | 11 LICENSE | 2 MD5 | 240 ++-- NEWS.md | 5 R/S3_definitions.R | 802 +++++++-------- R/Surv.R | 18 R/aggregating.R | 440 ++++---- R/data_document.R | 66 - R/direct_adjusting.R | 180 +-- R/evaluation.R | 4 R/flexyargs.R | 182 +-- R/fractional_years.R | 112 +- R/incidence_rates.R | 186 +-- R/incidence_rates_utils.R | 70 - R/lexpand.R | 766 +++++++------- R/long_df_and_array.R | 86 - R/ltable.R | 220 ++-- R/mean_survival.R | 458 ++++---- R/popEpi-package.R | 24 R/pophaz.R | 58 - R/prevalence.R | 86 - R/relative_poisson.R | 398 +++---- R/relative_poisson_net_survival.R | 84 - R/sir.R | 874 ++++++++--------- R/sir_utils.R | 68 - R/splitLexisDT.R | 197 +-- R/splitMulti.R | 226 ++-- R/splitting_utility_functions.R | 704 ++++++------- R/startup_message.R | 6 R/survival_aggregated.R | 574 +++++------ R/survival_lexis.R | 324 +++--- R/survival_utility_functions.R | 278 ++--- R/utility_functions.R | 619 +++++------- R/weighted_table.R | 336 +++--- README.md | 42 build/partial.rdb |binary build/vignette.rds |binary inst/doc/sir.html | 4 inst/doc/survtab_examples.html | 4 man/ICSS.Rd | 8 man/Lexis_fpa.Rd | 40 man/Surv.Rd | 2 man/adjust.Rd | 2 man/aggre.Rd | 77 - man/all_names_present.Rd | 8 man/array_df_ratetable_utils.Rd | 144 +- man/as.Date.yrs.Rd | 8 man/as.aggre.Rd | 12 man/cast_simple.Rd | 16 man/cut_bound.Rd | 2 man/direct_standardization.Rd | 30 man/fac2num.Rd | 6 man/flexible_argument.Rd | 24 man/get.yrs.Rd | 43 man/is.Date.Rd | 9 man/is_leap_year.Rd | 4 man/lexpand.Rd | 182 +-- man/lines.sirspline.Rd | 6 man/lines.survmean.Rd | 8 man/lines.survtab.Rd | 12 man/ltable.Rd | 90 - man/meanpop_fi.Rd | 14 man/na2zero.Rd | 6 man/plot.rate.Rd | 8 man/plot.sir.Rd | 26 man/plot.sirspline.Rd | 6 man/plot.survmean.Rd | 8 man/plot.survtab.Rd | 14 man/popEpi-package.Rd | 8 man/pophaz.Rd | 16 man/popmort.Rd | 20 man/prepExpo.Rd | 34 man/print.aggre.Rd | 8 man/print.rate.Rd | 4 man/print.survtab.Rd | 8 man/rate.Rd | 30 man/rate_ratio.Rd | 16 man/relpois.Rd | 29 man/relpois_ag.Rd | 22 man/robust_values.Rd | 2 man/rpcurve.Rd | 16 man/setaggre.Rd | 16 man/setclass.Rd | 4 man/setcolsnull.Rd | 6 man/sibr.Rd | 12 man/sir.Rd | 94 - man/sir_exp.Rd | 26 man/sir_ratio.Rd | 16 man/sire.Rd | 12 man/sirspline.Rd | 43 man/splitLexisDT.Rd | 29 man/splitMulti.Rd | 76 - man/stdpop101.Rd | 4 man/stdpop18.Rd | 10 man/summary.aggre.Rd | 4 man/summary.survtab.Rd | 20 man/survmean.Rd | 44 man/survtab.Rd | 167 +-- man/survtab_ag.Rd | 199 +-- man/try2int.Rd | 4 tests/testthat/test_Surv.R | 4 tests/testthat/test_aggre.R | 110 +- tests/testthat/test_epi.R | 10 tests/testthat/test_expo.R | 38 tests/testthat/test_lexpand.R | 218 ++-- tests/testthat/test_prevtab.R | 16 tests/testthat/test_rate.R | 112 +- tests/testthat/test_relpois_mean_curve.R | 24 tests/testthat/test_sir.R | 232 ++-- tests/testthat/test_splitLexisDT.R | 70 - tests/testthat/test_splitMulti.R | 82 - tests/testthat/test_splitting_attributes.R | 36 tests/testthat/test_splitting_breaks.R | 36 tests/testthat/test_splitting_randomly_on_fixed_data.R | 16 tests/testthat/test_survmean.R | 174 +-- tests/testthat/test_survtab_adjusted.R | 60 - tests/testthat/test_survtab_bad_surv_ints.R | 34 tests/testthat/test_survtab_relative.R | 97 - tests/testthat/test_survtab_usage.R | 256 ++-- tests/testthat/test_utils.R | 282 ++--- tests/testthat/test_weighter.R | 90 - 121 files changed, 6271 insertions(+), 6294 deletions(-)
Title: Test Theory Analysis and Biclustering
Description: Implements comprehensive test data engineering methods as described in
Shojima (2022, ISBN:978-9811699856). Provides statistical techniques for
engineering and processing test data: Classical Test Theory (CTT) with
reliability coefficients for continuous ability assessment; Item Response
Theory (IRT) including Rasch, 2PL, and 3PL models with item/test information
functions; Latent Class Analysis (LCA) for nominal clustering; Latent Rank
Analysis (LRA) for ordinal clustering with automatic determination of cluster
numbers; Biclustering methods including infinite relational models for
simultaneous clustering of examinees and items without predefined cluster
numbers; and Bayesian Network Models (BNM) for visualizing inter-item
dependencies. Features local dependence analysis through LRA and biclustering,
parameter estimation, dimensionality assessment, and network structure
visualization for educational, psychological, and social science research.
Author: Koji Kosugi [aut, cre]
Maintainer: Koji Kosugi <kosugitti@gmail.com>
Diff between exametrika versions 1.1.0 dated 2024-11-22 and 1.2.0 dated 2025-01-31
exametrika-1.1.0/exametrika/R/BinaryFunctionFactory.R |only exametrika-1.1.0/exametrika/R/Ch00dataFormat.R |only exametrika-1.1.0/exametrika/R/Ch02TestItemAnalysis.R |only exametrika-1.1.0/exametrika/R/Ch03CTT.R |only exametrika-1.1.0/exametrika/R/Ch04AbilityEstimation.R |only exametrika-1.1.0/exametrika/R/Ch04IRTbaseFunctions.R |only exametrika-1.1.0/exametrika/R/Ch04ParameterEstimation.R |only exametrika-1.1.0/exametrika/R/Ch07InfiniteRelationalModel.R |only exametrika-1.1.0/exametrika/R/EMclus.R |only exametrika-1.1.0/exametrika/R/IRPindex.R |only exametrika-1.1.0/exametrika/R/ModelFitModule.R |only exametrika-1.1.0/exametrika/R/ch05LCA.R |only exametrika-1.1.0/exametrika/R/ch06LRA.R |only exametrika-1.1.0/exametrika/R/ch07Biclustering.R |only exametrika-1.1.0/exametrika/R/ch08BNM.R |only exametrika-1.1.0/exametrika/R/ch08BNM_GA.R |only exametrika-1.1.0/exametrika/R/ch08GA_utils.R |only exametrika-1.1.0/exametrika/R/ch09LDLRA.R |only exametrika-1.1.0/exametrika/R/ch09LDLRA_GA.R |only exametrika-1.1.0/exametrika/R/ch10LDB.R |only exametrika-1.1.0/exametrika/R/ch11BINET.R |only exametrika-1.1.0/exametrika/R/dataset_explain.R |only exametrika-1.1.0/exametrika/R/exametrikaPlot.R |only exametrika-1.1.0/exametrika/R/exametrikaPrint.R |only exametrika-1.1.0/exametrika/R/progressbar.R |only exametrika-1.1.0/exametrika/man/createBinaryFunction.Rd |only exametrika-1.1.0/exametrika/man/dataFormat.long.Rd |only exametrika-1.2.0/exametrika/DESCRIPTION | 9 exametrika-1.2.0/exametrika/MD5 | 223 +++++----- exametrika-1.2.0/exametrika/NAMESPACE | 47 ++ exametrika-1.2.0/exametrika/NEWS.md | 46 +- exametrika-1.2.0/exametrika/R/00_EMclus.R |only exametrika-1.2.0/exametrika/R/00_IRPindex.R |only exametrika-1.2.0/exametrika/R/00_ModelFitModule.R |only exametrika-1.2.0/exametrika/R/00_QitemFunctions.R |only exametrika-1.2.0/exametrika/R/00_dataset_explain.R |only exametrika-1.2.0/exametrika/R/00_exametrikaPlot.R |only exametrika-1.2.0/exametrika/R/00_exametrikaPrint.R |only exametrika-1.2.0/exametrika/R/00_typeErrorMessage.R |only exametrika-1.2.0/exametrika/R/01_dataFormat.R |only exametrika-1.2.0/exametrika/R/02B_TestStatistics.R |only exametrika-1.2.0/exametrika/R/02C_ItemStatistics.R |only exametrika-1.2.0/exametrika/R/02D_StudentAnalysis.R |only exametrika-1.2.0/exametrika/R/02_TestItemFunctions.R |only exametrika-1.2.0/exametrika/R/03_CTT.R |only exametrika-1.2.0/exametrika/R/04A_IRTbaseFunctions.R |only exametrika-1.2.0/exametrika/R/04B_AbilityEstimation.R |only exametrika-1.2.0/exametrika/R/04C_ParameterEstimation.R |only exametrika-1.2.0/exametrika/R/05_LCA.R |only exametrika-1.2.0/exametrika/R/06_LRA.R |only exametrika-1.2.0/exametrika/R/07B_InfiniteRelationalModel.R |only exametrika-1.2.0/exametrika/R/07_Biclustering.R |only exametrika-1.2.0/exametrika/R/08A_BNM.R |only exametrika-1.2.0/exametrika/R/08B_GA_utils.R |only exametrika-1.2.0/exametrika/R/08C_BNM_GA.R |only exametrika-1.2.0/exametrika/R/09B_LDLRA_GA.R |only exametrika-1.2.0/exametrika/R/09_LDLRA.R |only exametrika-1.2.0/exametrika/R/10_LDB.R |only exametrika-1.2.0/exametrika/R/11_BINET.R |only exametrika-1.2.0/exametrika/README.md | 8 exametrika-1.2.0/exametrika/data/J12S5000.rda |binary exametrika-1.2.0/exametrika/data/J15S3810.rda |only exametrika-1.2.0/exametrika/data/J15S500.rda |binary exametrika-1.2.0/exametrika/data/J20S400.rda |binary exametrika-1.2.0/exametrika/data/J35S5000.rda |only exametrika-1.2.0/exametrika/data/J35S515.rda |binary exametrika-1.2.0/exametrika/data/J5S10.rda |binary exametrika-1.2.0/exametrika/man/AlphaCoefficient.Rd | 10 exametrika-1.2.0/exametrika/man/AlphaIfDel.Rd | 2 exametrika-1.2.0/exametrika/man/BINET.Rd | 2 exametrika-1.2.0/exametrika/man/BNM.Rd | 2 exametrika-1.2.0/exametrika/man/Biclustering.Rd | 2 exametrika-1.2.0/exametrika/man/Biserial_Correlation.Rd | 2 exametrika-1.2.0/exametrika/man/BitRespPtn.Rd | 2 exametrika-1.2.0/exametrika/man/CCRR.Rd | 7 exametrika-1.2.0/exametrika/man/CTT.Rd | 12 exametrika-1.2.0/exametrika/man/Dimensionality.Rd | 12 exametrika-1.2.0/exametrika/man/FieldAnalysis.Rd | 12 exametrika-1.2.0/exametrika/man/IIF2PLM.Rd | 2 exametrika-1.2.0/exametrika/man/IIF3PLM.Rd | 2 exametrika-1.2.0/exametrika/man/IRM.Rd | 2 exametrika-1.2.0/exametrika/man/IRT.Rd | 2 exametrika-1.2.0/exametrika/man/ITBiserial.Rd | 11 exametrika-1.2.0/exametrika/man/InterItemAnalysis.Rd | 7 exametrika-1.2.0/exametrika/man/ItemEntropy.Rd | 8 exametrika-1.2.0/exametrika/man/ItemFit.Rd | 2 exametrika-1.2.0/exametrika/man/ItemInformationFunc.Rd | 2 exametrika-1.2.0/exametrika/man/ItemLift.Rd | 7 exametrika-1.2.0/exametrika/man/ItemOdds.Rd | 7 exametrika-1.2.0/exametrika/man/ItemReport.Rd |only exametrika-1.2.0/exametrika/man/ItemStatistics.Rd | 2 exametrika-1.2.0/exametrika/man/ItemThreshold.Rd | 7 exametrika-1.2.0/exametrika/man/ItemTotalCorr.Rd | 7 exametrika-1.2.0/exametrika/man/J12S5000.Rd | 8 exametrika-1.2.0/exametrika/man/J15S3810.Rd |only exametrika-1.2.0/exametrika/man/J15S500.Rd | 8 exametrika-1.2.0/exametrika/man/J20S400.Rd | 8 exametrika-1.2.0/exametrika/man/J35S5000.Rd |only exametrika-1.2.0/exametrika/man/J35S515.Rd | 8 exametrika-1.2.0/exametrika/man/J5S10.Rd | 8 exametrika-1.2.0/exametrika/man/JCRR.Rd | 7 exametrika-1.2.0/exametrika/man/JointSampleSize.Rd | 7 exametrika-1.2.0/exametrika/man/LCA.Rd | 2 exametrika-1.2.0/exametrika/man/LDB.Rd | 2 exametrika-1.2.0/exametrika/man/LDLRA.Rd | 2 exametrika-1.2.0/exametrika/man/LD_param_est.Rd | 2 exametrika-1.2.0/exametrika/man/LRA.Rd | 2 exametrika-1.2.0/exametrika/man/LogisticModel.Rd | 2 exametrika-1.2.0/exametrika/man/MutualInformation.Rd | 7 exametrika-1.2.0/exametrika/man/OmegaCoefficient.Rd | 10 exametrika-1.2.0/exametrika/man/PSD_item_params.Rd | 2 exametrika-1.2.0/exametrika/man/PhiCoefficient.Rd | 7 exametrika-1.2.0/exametrika/man/RaschModel.Rd | 2 exametrika-1.2.0/exametrika/man/ScoreReport.Rd |only exametrika-1.2.0/exametrika/man/StrLearningGA_BNM.Rd | 2 exametrika-1.2.0/exametrika/man/StrLearningPBIL_BNM.Rd | 2 exametrika-1.2.0/exametrika/man/StrLearningPBIL_LDLRA.Rd | 2 exametrika-1.2.0/exametrika/man/StudentAnalysis.Rd | 2 exametrika-1.2.0/exametrika/man/TestFit.Rd | 2 exametrika-1.2.0/exametrika/man/TestFitSaturated.Rd | 2 exametrika-1.2.0/exametrika/man/TestInformationFunc.Rd | 2 exametrika-1.2.0/exametrika/man/TestStatistics.Rd | 37 + exametrika-1.2.0/exametrika/man/TetrachoricCorrelationMatrix.Rd | 7 exametrika-1.2.0/exametrika/man/ThreePLM.Rd | 2 exametrika-1.2.0/exametrika/man/TwoPLM.Rd | 2 exametrika-1.2.0/exametrika/man/asymprior.Rd | 2 exametrika-1.2.0/exametrika/man/calcFitIndices.Rd | 2 exametrika-1.2.0/exametrika/man/crr.Rd | 7 exametrika-1.2.0/exametrika/man/dataFormat.Rd | 44 + exametrika-1.2.0/exametrika/man/figures |only exametrika-1.2.0/exametrika/man/generate_category_labels.Rd |only exametrika-1.2.0/exametrika/man/longdataFormat.Rd |only exametrika-1.2.0/exametrika/man/maxParents_penalty.Rd | 2 exametrika-1.2.0/exametrika/man/nrs.Rd | 7 exametrika-1.2.0/exametrika/man/objective_function_IRT.Rd | 2 exametrika-1.2.0/exametrika/man/passage.Rd | 7 exametrika-1.2.0/exametrika/man/percentile.Rd | 7 exametrika-1.2.0/exametrika/man/plot.exametrika.Rd | 2 exametrika-1.2.0/exametrika/man/print.exametrika.Rd | 20 exametrika-1.2.0/exametrika/man/response_type_error.Rd |only exametrika-1.2.0/exametrika/man/slopeprior.Rd | 2 exametrika-1.2.0/exametrika/man/softmax.Rd | 2 exametrika-1.2.0/exametrika/man/sscore.Rd | 7 exametrika-1.2.0/exametrika/man/stanine.Rd | 7 exametrika-1.2.0/exametrika/man/tetrachoric.Rd | 2 145 files changed, 398 insertions(+), 346 deletions(-)
Title: 'DT' Extension for CRUD (Create, Read, Update, Delete)
Applications in 'shiny'
Description: The core of this package is a function eDT() which enhances DT::datatable() such that it can be used to interactively modify data in 'shiny'. By the use of generic 'dplyr' methods it supports many types of data storage, with relational databases ('dbplyr') being the main use case.
Author: Jasper Schelfhout [aut, cre],
Maxim Nazarov [rev],
Daan Seynaeve [rev],
Lennart Tuijnder [rev]
Maintainer: Jasper Schelfhout <jasper.schelfhout@openanalytics.eu>
Diff between editbl versions 1.0.5 dated 2024-05-21 and 1.1.0 dated 2025-01-31
editbl-1.0.5/editbl/man/createButtonsHTML.Rd |only editbl-1.1.0/editbl/DESCRIPTION | 12 editbl-1.1.0/editbl/MD5 | 49 editbl-1.1.0/editbl/NAMESPACE | 4 editbl-1.1.0/editbl/R/eDT.R | 553 +++++++--- editbl-1.1.0/editbl/R/utils.R | 20 editbl-1.1.0/editbl/README.md | 64 - editbl-1.1.0/editbl/build/vignette.rds |binary editbl-1.1.0/editbl/inst/NEWS | 4 editbl-1.1.0/editbl/inst/doc/howto_relational_db.html | 6 editbl-1.1.0/editbl/inst/doc/howto_relational_db_dm.html | 6 editbl-1.1.0/editbl/inst/doc/howto_row_level_access.R |only editbl-1.1.0/editbl/inst/doc/howto_row_level_access.html |only editbl-1.1.0/editbl/inst/doc/howto_row_level_access.rmd |only editbl-1.1.0/editbl/inst/doc/howto_switch_from_DT.html | 4 editbl-1.1.0/editbl/man/addButtons.Rd | 27 editbl-1.1.0/editbl/man/canXXXRowTemplate.Rd |only editbl-1.1.0/editbl/man/createButtons.Rd | 32 editbl-1.1.0/editbl/man/createDeleteButtonHTML.Rd |only editbl-1.1.0/editbl/man/createDeleteButtonHTML_shiny.Rd |only editbl-1.1.0/editbl/man/createEditButtonHTML.Rd |only editbl-1.1.0/editbl/man/createEditButtonHTML_shiny.Rd |only editbl-1.1.0/editbl/man/eDT.Rd | 38 editbl-1.1.0/editbl/man/eDTOutput.Rd | 3 editbl-1.1.0/editbl/man/evalCanDeleteRow.Rd |only editbl-1.1.0/editbl/man/evalCanEditRow.Rd |only editbl-1.1.0/editbl/man/initData.Rd | 16 editbl-1.1.0/editbl/man/overwriteDefaults.Rd |only editbl-1.1.0/editbl/tests/testthat/test-eDT.R | 41 editbl-1.1.0/editbl/tests/testthat/test-utils.R | 7 editbl-1.1.0/editbl/vignettes/howto_row_level_access.rmd |only editbl-1.1.0/editbl/vignettes/screenshots/howto_row_level_access_1.png |only editbl-1.1.0/editbl/vignettes/screenshots/howto_row_level_access_2.png |only 33 files changed, 669 insertions(+), 217 deletions(-)
Title: Spatial Ecology Miscellaneous Methods
Description: Collection of R functions and data sets for the support of spatial ecology analyses with a focus on pre, core and post modelling analyses of species distribution, niche quantification and community assembly. Written by current and former members and collaborators of the ecospat group of Antoine Guisan, Department of Ecology and Evolution (DEE) and Institute of Earth Surface Dynamics (IDYST), University of Lausanne, Switzerland. Read Di Cola et al. (2016) <doi:10.1111/ecog.02671> for details.
Author: Olivier Broennimann [cre, aut, ctb],
Valeria Di Cola [aut, ctb],
Blaise Petitpierre [ctb],
Frank Breiner [ctb],
Daniel Scherrer [ctb],
Manuela D`Amen [ctb],
Christophe Randin [ctb],
Robin Engler [ctb],
Wim Hordijk [ctb],
Heidi Mod [ctb],
Julien Potti [...truncated...]
Maintainer: Olivier Broennimann <olivier.broennimann@unil.ch>
Diff between ecospat versions 4.1.1 dated 2024-07-04 and 4.1.2 dated 2025-01-31
DESCRIPTION | 19 +++++++++---------- MD5 | 8 ++++---- NEWS | 7 +++++++ R/ecospat.CCV.R | 2 +- inst/doc/vignette_ecospat_package.pdf |binary 5 files changed, 21 insertions(+), 15 deletions(-)
Title: Covariance Measure Tests for Conditional Independence
Description: Covariance measure tests for conditional independence testing
against conditional covariance and nonlinear conditional mean alternatives.
The package implements versions of the generalised covariance measure test
(Shah and Peters, 2020, <doi:10.1214/19-aos1857>) and projected covariance
measure test (Lundborg et al., 2023, <doi:10.1214/24-AOS2447>). The
tram-GCM test, for censored responses, is implemented including the Cox
model and survival forests (Kook et al., 2024,
<doi:10.1080/01621459.2024.2395588>). Application examples to variable
significance testing and modality selection can be found in Kook and
Lundborg (2024, <doi:10.1093/bib/bbae475>).
Author: Lucas Kook [aut, cre] ,
Anton Rask Lundborg [ctb]
Maintainer: Lucas Kook <lucasheinrich.kook@gmail.com>
Diff between comets versions 0.1-0 dated 2024-12-06 and 0.1-1 dated 2025-01-31
DESCRIPTION | 29 +++++++----- MD5 | 16 +++--- NAMESPACE | 2 R/gcm.R | 69 +++++++++++++++++----------- R/regressions.R | 127 ++++++++++++++++++++++++++++++++++++++++++++++++++--- R/wgcm.R | 18 ++++--- man/gcm.Rd | 6 ++ man/regressions.Rd | 66 +++++++++++++++++++++++++-- man/wgcm.Rd | 11 ++++ 9 files changed, 277 insertions(+), 67 deletions(-)
Title: Model-Based Causal Feature Selection for General Response Types
Description: Extends invariant causal prediction (Peters et al., 2016,
<doi:10.1111/rssb.12167>) to generalized linear and transformation models
(Hothorn et al., 2018, <doi:10.1111/sjos.12291>).
The methodology is described in Kook et al. (2023,
<doi:10.1080/01621459.2024.2395588>).
Author: Lucas Kook [aut, cre] ,
Sorawit Saengkyongam [ctb],
Anton Rask Lundborg [ctb],
Torsten Hothorn [ctb],
Jonas Peters [ctb]
Maintainer: Lucas Kook <lucasheinrich.kook@gmail.com>
Diff between tramicp versions 0.0-2 dated 2024-03-14 and 0.1-0 dated 2025-01-31
DESCRIPTION | 12 +++--- MD5 | 8 ++-- R/tests.R | 4 +- R/tramicp.R | 102 +++++++++++++++++++++++++++++++----------------------- build/partial.rdb |binary 5 files changed, 73 insertions(+), 53 deletions(-)
Title: Accesses Weather Data from the Iowa Environment Mesonet
Description: Allows to get weather data from Automated Surface Observing
System (ASOS) stations (airports) in the whole world thanks to the
Iowa Environment Mesonet website.
Author: Maelle Salmon [aut, cre] ,
Brooke Anderson [rev] ,
CHAI Project [fnd] ,
rOpenSci [fnd] ,
Daryl Herzmann [ctb],
Jonathan Elchison [aut]
Maintainer: Maelle Salmon <maelle.salmon@yahoo.se>
Diff between riem versions 0.3.2 dated 2024-07-26 and 1.0.0 dated 2025-01-31
riem-0.3.2/riem/tests/fixtures |only riem-0.3.2/riem/tests/testthat/fixtures/measures/mesonet.agron.iastate.edu |only riem-0.3.2/riem/tests/testthat/fixtures/warnings/mesonet.agron.iastate.edu |only riem-1.0.0/riem/DESCRIPTION | 15 riem-1.0.0/riem/MD5 | 37 riem-1.0.0/riem/NEWS.md | 10 riem-1.0.0/riem/R/measures.R | 91 riem-1.0.0/riem/man/riem_measures.Rd | 33 riem-1.0.0/riem/tests/testthat/_snaps/measures.md | 50 riem-1.0.0/riem/tests/testthat/fixtures/measures-all-reports |only riem-1.0.0/riem/tests/testthat/fixtures/measures-hfmetar |only riem-1.0.0/riem/tests/testthat/fixtures/measures-hfmetar-routine |only riem-1.0.0/riem/tests/testthat/fixtures/measures-hfmetar-specials |only riem-1.0.0/riem/tests/testthat/fixtures/measures-multiple-data |only riem-1.0.0/riem/tests/testthat/fixtures/measures-routine |only riem-1.0.0/riem/tests/testthat/fixtures/measures-specials |only riem-1.0.0/riem/tests/testthat/fixtures/measures/api |only riem-1.0.0/riem/tests/testthat/fixtures/measures2 |only riem-1.0.0/riem/tests/testthat/fixtures/networks/mesonet.agron.iastate.edu/api/1/networks.json.json | 1440 +++++----- riem-1.0.0/riem/tests/testthat/fixtures/stations/mesonet.agron.iastate.edu/api/1/network/IN__ASOS.json.json | 516 ++- riem-1.0.0/riem/tests/testthat/fixtures/stations/mesonet.agron.iastate.edu/api/1/networks.json.json | 1440 +++++----- riem-1.0.0/riem/tests/testthat/fixtures/warnings/api |only riem-1.0.0/riem/tests/testthat/helper-riem.R | 3 riem-1.0.0/riem/tests/testthat/test-measures.R | 309 +- 24 files changed, 2287 insertions(+), 1657 deletions(-)
Title: Fast Symbolic Multivariate Polynomials
Description: Fast manipulation of symbolic multivariate polynomials
using the 'Map' class of the Standard Template Library. The package
uses print and coercion methods from the 'mpoly' package but
offers speed improvements. It is comparable in speed to the 'spray'
package for sparse arrays, but retains the symbolic benefits of
'mpoly'. To cite the package in publications, use Hankin 2022
<doi:10.48550/ARXIV.2210.15991>. Uses 'disordR' discipline.
Author: Robin K. S. Hankin [aut, cre]
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>
Diff between mvp versions 1.0-14 dated 2023-03-19 and 1.0-18 dated 2025-01-31
mvp-1.0-14/mvp/inst/doc/mvp.pdf |only mvp-1.0-14/mvp/man/lose.Rd |only mvp-1.0-14/mvp/vignettes/poly.bib |only mvp-1.0-18/mvp/DESCRIPTION | 22 +++-- mvp-1.0-18/mvp/MD5 | 64 +++++++++-------- mvp-1.0-18/mvp/NAMESPACE | 6 - mvp-1.0-18/mvp/NEWS.md |only mvp-1.0-18/mvp/R/skimpy.R | 99 ++++++++++++++++++-------- mvp-1.0-18/mvp/R/skimpy_ops.R | 10 ++ mvp-1.0-18/mvp/README.md | 2 mvp-1.0-18/mvp/build/partial.rdb |binary mvp-1.0-18/mvp/build/vignette.rds |binary mvp-1.0-18/mvp/data |only mvp-1.0-18/mvp/inst/doc/mvp.R | 70 ++++++++++-------- mvp-1.0-18/mvp/inst/doc/mvp.Rmd | 116 +++++++++++++++---------------- mvp-1.0-18/mvp/inst/doc/mvp.html |only mvp-1.0-18/mvp/inst/mvp_stickermaker.R |only mvp-1.0-18/mvp/inst/symb.Rmd |only mvp-1.0-18/mvp/man/Ops.mvp.Rd | 10 ++ mvp-1.0-18/mvp/man/all.equal.Rd |only mvp-1.0-18/mvp/man/allvars.Rd | 5 + mvp-1.0-18/mvp/man/as.function.Rd | 2 mvp-1.0-18/mvp/man/coeffs.Rd | 11 ++ mvp-1.0-18/mvp/man/deriv.Rd | 31 +++++--- mvp-1.0-18/mvp/man/drop.Rd |only mvp-1.0-18/mvp/man/horner.Rd | 2 mvp-1.0-18/mvp/man/letters.Rd |only mvp-1.0-18/mvp/man/mvp.Rd | 11 ++ mvp-1.0-18/mvp/man/ooom.Rd | 2 mvp-1.0-18/mvp/man/rmvp.Rd | 22 ++++- mvp-1.0-18/mvp/man/series.Rd | 14 +-- mvp-1.0-18/mvp/man/subs.Rd | 14 +-- mvp-1.0-18/mvp/man/summary.Rd | 2 mvp-1.0-18/mvp/src/skimpy.cpp | 28 +++---- mvp-1.0-18/mvp/tests/testthat/test_aaa.R | 6 + mvp-1.0-18/mvp/tests/testthat/test_aac.R | 2 mvp-1.0-18/mvp/tests/testthat/test_aag.R | 26 ++++-- mvp-1.0-18/mvp/vignettes/mvp.Rmd | 116 +++++++++++++++---------------- mvp-1.0-18/mvp/vignettes/mvp.bib |only 39 files changed, 407 insertions(+), 286 deletions(-)
Title: 'GeoNetwork' API R Interface
Description: Provides an R interface to the 'GeoNetwork' API (<https://geonetwork-opensource.org/#api>) allowing to upload and publish metadata in a 'GeoNetwork' web-application and expose it to OGC CSW.
Author: Emmanuel Blondel [aut, cre]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between geonapi versions 0.7-2 dated 2024-03-21 and 0.8 dated 2025-01-31
DESCRIPTION | 12 +++--- MD5 | 47 ++++++++++++------------- NEWS.md | 12 ++++-- R/GNAbstractManager.R | 4 +- R/GNLegacyAPIManager.R | 26 +++++++++----- R/GNManager.R | 4 +- R/GNOpenAPIManager.R | 30 ++++++++++------ R/GNPriv.R | 8 ++-- R/GNPrivConfiguration.R | 6 +-- R/GNRESTRequest.R | 4 +- R/GNUtils.R | 4 +- R/GNVersion.R | 4 +- R/geonapi.R | 3 - README.md | 6 +-- man/GNAbstractManager.Rd | 4 +- man/GNLegacyAPIManager.Rd | 14 +++---- man/GNManager.Rd | 4 +- man/GNOpenAPIManager.Rd | 22 +++++------ man/GNPriv.Rd |only man/GNPrivConfiguration.Rd | 74 ++-------------------------------------- man/GNRESTRequest.Rd | 4 +- man/GNUtils.Rd | 4 +- man/GNVersion.Rd | 4 +- man/geonapi.Rd | 9 ++++ tests/testthat/test_GNManager.R | 2 - 25 files changed, 138 insertions(+), 173 deletions(-)
Title: Vaccine Extension Package for ADaM in 'R' Asset Library
Description: Programming vaccine specific Clinical Data Interchange
Standards Consortium (CDISC) compliant Analysis Data Model (ADaM)
datasets in 'R'. Flat model is followed as per
Center for Biologics Evaluation and Research (CBER) guidelines for
creating vaccine specific domains. ADaM datasets are a mandatory part
of any New Drug or Biologics License Application submitted to the
United States Food and Drug Administration (FDA). Analysis derivations
are implemented in accordance with the "Analysis Data Model
Implementation Guide" (CDISC Analysis Data Model Team (2021),
<https://www.cdisc.org/standards/foundational/adam/adamig-v1-3-release-package>).
The package is an extension package of the 'admiral' package.
Author: Sukalpo Saha [aut, cre],
Arjun Rubalingam [aut],
Ben Straub [aut],
Vikram S [aut],
Dhivya Kanagaraj [aut],
Federico Baratin [aut],
Yamini Purna Bollu [aut],
Ilse Augustyns [aut],
Kalyani Bodicherla [aut],
Hilde Delanghe [aut],
Lee Armishaw [aut],
Nee [...truncated...]
Maintainer: Sukalpo Saha <sukalpo.saha@pfizer.com>
Diff between admiralvaccine versions 0.3.0 dated 2024-08-29 and 0.4.0 dated 2025-01-31
DESCRIPTION | 9 MD5 | 142 NAMESPACE | 352 - NEWS.md | 148 R/admiralvaccine.R | 70 R/data.R | 78 R/derive_diam_to_sev_records.R | 404 +- R/derive_fever_records.R | 266 - R/derive_var_aval_adis.R | 240 - R/derive_vars_crit.R | 307 - R/derive_vars_event_flag.R | 342 - R/derive_vars_max_flag.R | 328 - R/derive_vars_merged_vaccine.R | 234 - R/derive_vars_params.R | 276 - R/derive_vars_vaxdt.R | 242 - R/global.R | 228 - R/post_process_reacto.R | 104 README.md | 220 - build/vignette.rds |binary inst/WORDLIST | 152 inst/doc/adce.R | 344 - inst/doc/adce.Rmd | 498 +- inst/doc/adce.html | 2810 +++++++------- inst/doc/adface.R | 708 +-- inst/doc/adface.Rmd | 1172 ++--- inst/doc/adface.html | 4542 +++++++++++------------ inst/doc/adis.R | 876 ++-- inst/doc/adis.Rmd | 1232 +++--- inst/doc/adis.html | 4271 ++++++++++----------- inst/doc/admiralvaccine.R | 78 inst/doc/admiralvaccine.Rmd | 204 - inst/doc/admiralvaccine.html | 836 ++-- inst/doc/adsl.R | 290 - inst/doc/adsl.Rmd | 602 +-- inst/doc/adsl.html | 1586 ++++---- inst/templates/ad_adce.R | 326 - inst/templates/ad_adface.R | 582 +- inst/templates/ad_adis.R | 742 +-- inst/templates/ad_adsl.R | 358 - man/admiralvaccine-package.Rd | 124 man/admiralvaccine_adce.Rd | 52 man/admiralvaccine_adface.Rd | 52 man/admiralvaccine_adis.Rd | 52 man/admiralvaccine_adsl.Rd | 52 man/derive_diam_to_sev_records.Rd | 296 - man/derive_fever_records.Rd | 158 man/derive_var_aval_adis.Rd | 204 - man/derive_vars_crit.Rd | 214 - man/derive_vars_event_flag.Rd | 234 - man/derive_vars_max_flag.Rd | 170 man/derive_vars_merged_vaccine.Rd | 182 man/derive_vars_params.Rd | 198 - man/derive_vars_vaxdt.Rd | 168 man/max_flag.Rd | 104 man/post_process_reacto.Rd | 104 man/roxygen/meta.R | 28 tests/testthat.R | 8 tests/testthat/test-derive_diam_to_sev_records.R | 784 +-- tests/testthat/test-derive_fever_records.R | 174 tests/testthat/test-derive_var_aval_adis.R | 756 +-- tests/testthat/test-derive_vars_crit.R | 441 +- tests/testthat/test-derive_vars_event_flag.R | 452 +- tests/testthat/test-derive_vars_max_flag.R | 326 - tests/testthat/test-derive_vars_merged_vaccine.R | 198 - tests/testthat/test-derive_vars_params.R | 406 +- tests/testthat/test-derive_vars_vaxdt.R | 224 - tests/testthat/test-post_process_reacto.R | 96 vignettes/adce.Rmd | 498 +- vignettes/adface.Rmd | 1172 ++--- vignettes/adis.Rmd | 1232 +++--- vignettes/admiralvaccine.Rmd | 204 - vignettes/adsl.Rmd | 602 +-- 72 files changed, 18109 insertions(+), 18055 deletions(-)
More information about admiralvaccine at CRAN
Permanent link
Title: Create Overlapping Stacked Plots
Description: Easily create overlapping grammar of graphics plots for scientific data visualization.
This style of plotting is particularly common in climatology and oceanography research communities.
Author: Sebastian Kopf [aut, cre, cph]
,
Tristan Caro [aut] ,
Jamie McFarlin [aut] ,
Jon Raberg [aut]
Maintainer: Sebastian Kopf <sebastian.kopf@colorado.edu>
Diff between ggstackplot versions 0.4 dated 2025-01-14 and 0.4.1 dated 2025-01-31
ggstackplot-0.4.1/ggstackplot/DESCRIPTION | 13 ggstackplot-0.4.1/ggstackplot/MD5 | 42 +-- ggstackplot-0.4.1/ggstackplot/NEWS.md | 8 ggstackplot-0.4.1/ggstackplot/R/ggstackplot.R | 33 +- ggstackplot-0.4.1/ggstackplot/R/helpers.R | 22 + ggstackplot-0.4.1/ggstackplot/README.md | 137 ++++++++-- ggstackplot-0.4.1/ggstackplot/build/vignette.rds |binary ggstackplot-0.4.1/ggstackplot/inst/doc/ggstackplot.R |only ggstackplot-0.4.1/ggstackplot/inst/doc/ggstackplot.Rmd |only ggstackplot-0.4.1/ggstackplot/inst/doc/ggstackplot.html |only ggstackplot-0.4.1/ggstackplot/man/figures/README-geodata-horizontal-1.png |only ggstackplot-0.4.1/ggstackplot/man/figures/README-geodata-horizontal-2-1.png |only ggstackplot-0.4.1/ggstackplot/man/ggstackplot-package.Rd | 11 ggstackplot-0.4.1/ggstackplot/man/ggstackplot.Rd | 9 ggstackplot-0.4.1/ggstackplot/tests/testthat/Rplots.pdf |only ggstackplot-0.4.1/ggstackplot/tests/testthat/_snaps/ggstackplot/horizontally-stacked-plot.svg | 64 ++-- ggstackplot-0.4.1/ggstackplot/tests/testthat/_snaps/ggstackplot/hstack-w-axis-defs-and-labs-in-template.svg | 44 +-- ggstackplot-0.4.1/ggstackplot/tests/testthat/_snaps/ggstackplot/hstack-w-axis-defs-in-template.svg | 44 +-- ggstackplot-0.4.1/ggstackplot/tests/testthat/_snaps/ggstackplot/vstack-w-axis-defs-in-template.svg | 54 +-- ggstackplot-0.4.1/ggstackplot/tests/testthat/test-ggstackplot.R | 2 ggstackplot-0.4.1/ggstackplot/vignettes/ggstackplot.Rmd |only ggstackplot-0.4/ggstackplot/inst/doc/features.R |only ggstackplot-0.4/ggstackplot/inst/doc/features.Rmd |only ggstackplot-0.4/ggstackplot/inst/doc/features.html |only ggstackplot-0.4/ggstackplot/man/figures/README-example-1.png |only ggstackplot-0.4/ggstackplot/man/figures/README-example2-1.png |only ggstackplot-0.4/ggstackplot/vignettes/features.Rmd |only ggstackplot-0.4/ggstackplot/vignettes/unused |only 28 files changed, 300 insertions(+), 183 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-12-16 0.0.9
Title: Analysis of Bivariate Survival Data Based on Copulas
Description: Simulating bivariate survival data from copula models.
Estimation of the association parameter in copula models.
Two different ways to estimate the association parameter in copula models are implemented.
A goodness-of-fit test for a given copula model is implemented.
See Emura, Lin and Wang (2010) <doi:10.1016/j.csda.2010.03.013> for details.
Author: Takeshi Emura [aut, cre]
Maintainer: Takeshi Emura <takeshiemura@gmail.com>
Diff between Copula.surv versions 1.7 dated 2024-10-26 and 1.8 dated 2025-01-31
DESCRIPTION | 8 ++++---- MD5 | 4 +++- R/Weib.reg.Frank.R |only man/Weib.reg.Frank.Rd |only 4 files changed, 7 insertions(+), 5 deletions(-)
Title: Tail Classifier
Description: The function TailClassifier() suggests one of the following types of tail for your discrete data: 1) Power decaying tail; 2) Sub-exponential decaying tail; and 3) Near-exponential decaying tail. The function also provides an estimate of the parameter for the classified-distribution as a reference.
Author: Jialin Zhang [aut, cph, cre]
Maintainer: Jialin Zhang (JZ) <jzhang@math.msstate.edu>
Diff between TailClassifier versions 0.1.1 dated 2023-10-30 and 0.1.2 dated 2025-01-31
DESCRIPTION | 13 +++++++----- MD5 | 6 ++--- R/TailClassifier.r | 52 ++++++++++++++++++++++++++++++++++++++------------ man/TailClassifier.Rd | 13 ++++++++++-- 4 files changed, 62 insertions(+), 22 deletions(-)
More information about TailClassifier at CRAN
Permanent link
Title: Estimated Marginal Means, aka Least-Squares Means
Description: Obtain estimated marginal means (EMMs) for many linear, generalized
linear, and mixed models. Compute contrasts or linear functions of EMMs,
trends, and comparisons of slopes. Plots and other displays.
Least-squares means are discussed, and the term "estimated marginal means"
is suggested, in Searle, Speed, and Milliken (1980) Population marginal means
in the linear model: An alternative to least squares means, The American
Statistician 34(4), 216-221 <doi:10.1080/00031305.1980.10483031>.
Author: Russell V. Lenth [aut, cre, cph],
Balazs Banfai [ctb],
Ben Bolker [ctb],
Paul Buerkner [ctb],
Iago Gine-Vazquez [ctb],
Maxime Herve [ctb],
Maarten Jung [ctb],
Jonathon Love [ctb],
Fernando Miguez [ctb],
Julia Piaskowski [ctb],
Hannes Riebl [ctb],
Hen [...truncated...]
Maintainer: Russell V. Lenth <russell-lenth@uiowa.edu>
Diff between emmeans versions 1.10.6 dated 2024-12-12 and 1.10.7 dated 2025-01-31
DESCRIPTION | 8 - MD5 | 112 +++++++++--------- NAMESPACE | 1 NEWS.md | 20 +++ R/emmGrid-methods.R | 150 ++++++++++-------------- R/emmeans-package.R | 4 R/emmeans.R | 48 +++++++ R/rbind.R | 4 R/ref-grid.R | 225 +++++++++++++++++++++++++++---------- inst/doc/AQuickStart.Rmd | 6 inst/doc/AQuickStart.html | 14 +- inst/doc/FAQs.Rmd | 15 ++ inst/doc/FAQs.html | 23 +++ inst/doc/basics.R | 24 +-- inst/doc/basics.Rmd | 2 inst/doc/basics.html | 26 ++-- inst/doc/comparisons.R | 2 inst/doc/comparisons.Rmd | 4 inst/doc/comparisons.html | 22 +-- inst/doc/confidence-intervals.R | 4 inst/doc/confidence-intervals.Rmd | 6 inst/doc/confidence-intervals.html | 16 +- inst/doc/interactions.html | 26 ++-- inst/doc/messy-data.R | 10 - inst/doc/messy-data.Rmd | 2 inst/doc/messy-data.html | 18 +- inst/doc/models.Rmd | 2 inst/doc/models.html | 6 inst/doc/predictions.R | 4 inst/doc/predictions.html | 6 inst/doc/re-engineering-clds.html | 4 inst/doc/sophisticated.R | 28 ++-- inst/doc/sophisticated.html | 12 - inst/doc/transformations.R | 34 ++--- inst/doc/transformations.Rmd | 4 inst/doc/transformations.html | 22 ++- inst/doc/utilities.R | 8 - inst/doc/utilities.html | 4 inst/doc/vignette-topics.Rmd | 8 - inst/doc/vignette-topics.html | 12 - inst/doc/xplanations.R | 2 inst/doc/xplanations.html | 14 +- inst/doc/xtending.R | 2 inst/doc/xtending.Rmd | 2 inst/doc/xtending.html | 10 - man/emmeans.Rd | 16 ++ man/ref_grid.Rd | 48 ++++--- vignettes/AQuickStart.Rmd | 6 vignettes/FAQs.Rmd | 15 ++ vignettes/basics.Rmd | 2 vignettes/comparisons.Rmd | 4 vignettes/confidence-intervals.Rmd | 6 vignettes/messy-data.Rmd | 2 vignettes/models.Rmd | 2 vignettes/transformations.Rmd | 4 vignettes/vignette-topics.Rmd | 8 - vignettes/xtending.Rmd | 2 57 files changed, 659 insertions(+), 432 deletions(-)