Title: Boundary Adaptive Local Polynomial Conditional Density Estimator
Description: Tools for estimation and inference of conditional densities, derivatives and functions. This is the companion software for Cattaneo, Chandak, Jansson and Ma (2024) <doi:10.3150/23-BEJ1711>.
Author: Matias D. Cattaneo [aut],
Michael Jansson [aut],
Xinwei Ma [aut],
Rajita Chandak [aut, cre]
Maintainer: Rajita Chandak <rajita.chandak@epfl.ch>
Diff between lpcde versions 0.1.5 dated 2024-11-14 and 0.1.6 dated 2025-02-25
lpcde-0.1.5/lpcde/LICENSE |only lpcde-0.1.6/lpcde/DESCRIPTION | 30 lpcde-0.1.6/lpcde/MD5 | 57 - lpcde-0.1.6/lpcde/NEWS.md | 10 lpcde-0.1.6/lpcde/R/lpbwcde.R | 237 ++-- lpcde-0.1.6/lpcde/R/lpbwcde_fns.R | 1212 +++++++++++------------ lpcde-0.1.6/lpcde/R/lpbwcde_methods.R | 136 +- lpcde-0.1.6/lpcde/R/lpcde-package.R | 1 lpcde-0.1.6/lpcde/R/lpcde.R | 257 ++-- lpcde-0.1.6/lpcde/R/lpcde_fns.R | 998 +++++++++--------- lpcde-0.1.6/lpcde/R/lpcde_methods.R | 578 ++++++---- lpcde-0.1.6/lpcde/R/matrices.R | 140 +- lpcde-0.1.6/lpcde/R/utils.R | 328 +++--- lpcde-0.1.6/lpcde/README.md | 70 + lpcde-0.1.6/lpcde/build/partial.rdb |binary lpcde-0.1.6/lpcde/inst/REFERENCES.bib | 2 lpcde-0.1.6/lpcde/man/coef.lpcde.Rd | 10 lpcde-0.1.6/lpcde/man/confint.lpcde.Rd | 10 lpcde-0.1.6/lpcde/man/lpbwcde.Rd | 12 lpcde-0.1.6/lpcde/man/lpcde.Rd | 14 lpcde-0.1.6/lpcde/man/print.lpbwcde.Rd | 13 lpcde-0.1.6/lpcde/man/print.lpcde.Rd | 10 lpcde-0.1.6/lpcde/man/summary.lpbwcde.Rd | 13 lpcde-0.1.6/lpcde/man/summary.lpcde.Rd | 10 lpcde-0.1.6/lpcde/man/vcov.lpcde.Rd | 10 lpcde-0.1.6/lpcde/tests/test.R | 42 lpcde-0.1.6/lpcde/tests/testthat/test-lpbwcde.R | 39 lpcde-0.1.6/lpcde/tests/testthat/test-lpcde.R | 95 - lpcde-0.1.6/lpcde/tests/testthat/test-matrices.R | 9 lpcde-0.1.6/lpcde/tests/testthat/test-utils.R | 2 30 files changed, 2286 insertions(+), 2059 deletions(-)
Title: Transformation Models
Description: Formula-based user-interfaces to specific transformation models
implemented in package 'mlt' (<DOI:10.32614/CRAN.package.mlt>, <DOI:10.32614/CRAN.package.mlt.docreg>).
Available models include Cox models, some parametric
survival models (Weibull, etc.), models for ordered categorical variables,
normal and non-normal (Box-Cox type) linear models, and continuous outcome logistic regression
(Lohse et al., 2017, <DOI:10.12688/f1000research.12934.1>). The underlying theory
is described in Hothorn et al. (2018) <DOI:10.1111/sjos.12291>. An extension to
transformation models for clustered data is provided (Barbanti and Hothorn, 2022,
<DOI:10.1093/biostatistics/kxac048>). Multivariate conditional transformation models
(Klein et al, 2022, <DOI:10.1111/sjos.12501>) and shift-scale transformation models (Siegfried et al, 2023,
<DOI:10.1080/00031305.2023.2203177>) can be fitted as well. The package contains an implementation of
a doubly robust score test, [...truncated...]
Author: Torsten Hothorn [aut, cre] ,
Luisa Barbanti [aut] ,
Sandra Siegfried [aut] ,
Lucas Kook [aut] ,
Brian Ripley [ctb],
Bill Venables [ctb],
Douglas M. Bates [ctb],
Nadja Klein [ctb]
Maintainer: Torsten Hothorn <Torsten.Hothorn@R-project.org>
Diff between tram versions 1.2-0 dated 2024-11-19 and 1.2-1 dated 2025-02-25
tram-1.2-0/tram/demo/mnc.R |only tram-1.2-1/tram/DESCRIPTION | 20 tram-1.2-1/tram/MD5 | 60 + tram-1.2-1/tram/NAMESPACE | 5 tram-1.2-1/tram/R/Compris.R | 2 tram-1.2-1/tram/R/internal.R | 3 tram-1.2-1/tram/R/methods.R | 20 tram-1.2-1/tram/R/robust-score-test.R |only tram-1.2-1/tram/demo/00Index | 2 tram-1.2-1/tram/demo/NAMI.R |only tram-1.2-1/tram/demo/SCI_ePolr.R | 11 tram-1.2-1/tram/demo/mtram.R | 951 ------------------------------- tram-1.2-1/tram/demo/npn.R | 17 tram-1.2-1/tram/demo/stram.R | 10 tram-1.2-1/tram/demo/survtram.R | 10 tram-1.2-1/tram/demo/tram.R | 403 ------------- tram-1.2-1/tram/demo/undernutrition.R | 22 tram-1.2-1/tram/inst/NEWS.Rd | 10 tram-1.2-1/tram/inst/doc/mtram.R | 144 ---- tram-1.2-1/tram/inst/doc/mtram.Rnw | 476 +++++++++++---- tram-1.2-1/tram/inst/doc/mtram.pdf |binary tram-1.2-1/tram/inst/doc/tram.R | 42 - tram-1.2-1/tram/inst/doc/tram.Rnw | 49 - tram-1.2-1/tram/inst/doc/tram.pdf |binary tram-1.2-1/tram/man/Compris.Rd | 4 tram-1.2-1/tram/man/robust_score_test.Rd |only tram-1.2-1/tram/man/tram-methods.Rd | 5 tram-1.2-1/tram/tests/bugfixes.R | 10 tram-1.2-1/tram/tests/stram-Ex.R | 3 tram-1.2-1/tram/tests/stram-Ex.Rout.save | 14 tram-1.2-1/tram/vignettes/mlt.bib | 169 +++++ tram-1.2-1/tram/vignettes/mtram.Rnw | 476 +++++++++++---- tram-1.2-1/tram/vignettes/tram.Rnw | 49 - 33 files changed, 1077 insertions(+), 1910 deletions(-)
More information about scalablebayesm at CRAN
Permanent link
Title: Spatial and Spatio-Temporal Models using 'INLA'
Description: Prepare objects to implement models over spatial and
spacetime domains with the 'INLA' package (<https://www.r-inla.org>).
These objects contain data to for the 'cgeneric' interface in
'INLA', enabling fast parallel computations.
We implemented the spatial barrier model, see Bakka et. al. (2019)
<doi:10.1016/j.spasta.2019.01.002>, and some of the spatio-temporal
models proposed in Lindgren et. al. (2023)
<https://www.idescat.cat/sort/sort481/48.1.1.Lindgren-etal.pdf>.
Details are provided in the available vignettes and from the URL bellow.
Author: Elias Teixeira Krainski [cre, aut, cph]
,
Finn Lindgren [aut] ,
Haavard Rue [aut]
Maintainer: Elias Teixeira Krainski <eliaskrainski@gmail.com>
Diff between INLAspacetime versions 0.1.10 dated 2024-10-16 and 0.1.11 dated 2025-02-25
INLAspacetime-0.1.10/INLAspacetime/inst/doc/transparent_barriers.pdf |only INLAspacetime-0.1.10/INLAspacetime/src/ar2cov.c |only INLAspacetime-0.1.10/INLAspacetime/src/ar2cov.h |only INLAspacetime-0.1.10/INLAspacetime/src/cgeneric_defs.h |only INLAspacetime-0.1.10/INLAspacetime/vignettes/transparent_barriers.html |only INLAspacetime-0.1.10/INLAspacetime/vignettes/web/Piemonte_borders.csv |only INLAspacetime-0.1.10/INLAspacetime/vignettes/web/Piemonte_data_byday.csv |only INLAspacetime-0.1.10/INLAspacetime/vignettes/web/barrierExample.R |only INLAspacetime-0.1.10/INLAspacetime/vignettes/web/barrierExample.html |only INLAspacetime-0.1.10/INLAspacetime/vignettes/web/coordinates.csv |only INLAspacetime-0.1.10/INLAspacetime/vignettes/web/piemonte.R |only INLAspacetime-0.1.10/INLAspacetime/vignettes/web/piemonte.html |only INLAspacetime-0.1.11/INLAspacetime/DESCRIPTION | 6 INLAspacetime-0.1.11/INLAspacetime/MD5 | 40 +-- INLAspacetime-0.1.11/INLAspacetime/NAMESPACE | 1 INLAspacetime-0.1.11/INLAspacetime/R/barrierModel.define.R | 33 +- INLAspacetime-0.1.11/INLAspacetime/R/cgeneric_sspde.R |only INLAspacetime-0.1.11/INLAspacetime/R/stModel.define.R | 50 ++- INLAspacetime-0.1.11/INLAspacetime/README.md | 128 +++++++--- INLAspacetime-0.1.11/INLAspacetime/build/partial.rdb |binary INLAspacetime-0.1.11/INLAspacetime/build/vignette.rds |binary INLAspacetime-0.1.11/INLAspacetime/inst/doc/transparent_barriers.html |only INLAspacetime-0.1.11/INLAspacetime/man/cgeneric_sspde.Rd |only INLAspacetime-0.1.11/INLAspacetime/man/stModel.define.Rd | 16 - INLAspacetime-0.1.11/INLAspacetime/src/INLAspacetime.c |only INLAspacetime-0.1.11/INLAspacetime/src/INLAspacetime.h |only INLAspacetime-0.1.11/INLAspacetime/src/cgeneric_ar2ss.c | 2 INLAspacetime-0.1.11/INLAspacetime/src/cgeneric_barrier.c | 33 +- INLAspacetime-0.1.11/INLAspacetime/src/cgeneric_sspde.c |only INLAspacetime-0.1.11/INLAspacetime/src/cgeneric_sstspde.c | 106 ++------ 30 files changed, 214 insertions(+), 201 deletions(-)
Title: Bayesian Vector Heterogeneous Autoregressive Modeling
Description: Tools to model and forecast multivariate time series
including Bayesian Vector heterogeneous autoregressive (VHAR) model
by Kim & Baek (2023) (<doi:10.1080/00949655.2023.2281644>).
'bvhar' can model Vector Autoregressive (VAR), VHAR, Bayesian VAR (BVAR), and Bayesian VHAR (BVHAR) models.
Author: Young Geun Kim [aut, cre, cph]
,
Changryong Baek [ctb]
Maintainer: Young Geun Kim <ygeunkimstat@gmail.com>
Diff between bvhar versions 2.2.0 dated 2025-02-06 and 2.2.1 dated 2025-02-25
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NEWS.md | 2 ++ inst/doc/shrinkage.R | 3 ++- inst/doc/shrinkage.Rmd | 3 ++- inst/doc/stochastic-volatility.R | 3 ++- inst/doc/stochastic-volatility.Rmd | 3 ++- vignettes/shrinkage.Rmd | 3 ++- vignettes/stochastic-volatility.Rmd | 3 ++- 9 files changed, 25 insertions(+), 17 deletions(-)
Title: Dyadic Mixed Model for Pedigree Data
Description: Mixed model analysis for quantitative genetics
with multi-trait responses and pedigree-based partitioning
of individual variation into a range of environmental and
genetic variance components for individual and
maternal effects. Method documented in dmmOverview.pdf; dmm is an
implementation of dispersion mean model described by
Searle et al. (1992) "Variance Components", Wiley, NY.
'DMM' can do 'MINQUE', 'bias-corrected-ML', and 'REML' variance component estimates.
Author: Neville Jackson [aut, cre]
Maintainer: Neville Jackson <nanddjackson@bigpond.com>
Diff between dmm versions 2.1-10 dated 2024-06-03 and 3.1-1 dated 2025-02-25
dmm-2.1-10/dmm/inst/doc/solvedme.pdf |only dmm-3.1-1/dmm/DESCRIPTION | 21 +++--- dmm-3.1-1/dmm/MD5 | 97 +++++++++++++++------------- dmm-3.1-1/dmm/R/blockvec.R |only dmm-3.1-1/dmm/R/colstack.R |only dmm-3.1-1/dmm/R/csummary.dmm.R | 10 +- dmm-3.1-1/dmm/R/csummary_specific.R | 12 +-- dmm-3.1-1/dmm/R/dae.nonspecific.I.R | 4 - dmm-3.1-1/dmm/R/dae.nonspecific.R | 4 - dmm-3.1-1/dmm/R/dae.nonspecific.S.R | 4 - dmm-3.1-1/dmm/R/dae.specific.I.R | 6 - dmm-3.1-1/dmm/R/dae.specific.R | 6 - dmm-3.1-1/dmm/R/dae.specific.S.R | 6 - dmm-3.1-1/dmm/R/diagstack.R |only dmm-3.1-1/dmm/R/dmesolve.R | 92 ++++++++++++++++++++------ dmm-3.1-1/dmm/R/dmm.R | 2 dmm-3.1-1/dmm/R/dmm.default.R | 8 +- dmm-3.1-1/dmm/R/dmm_array.R | 4 - dmm-3.1-1/dmm/R/dmm_blockarray.R | 4 - dmm-3.1-1/dmm/R/dyad.am.expect.R | 22 +++--- dmm-3.1-1/dmm/R/fgls.iter.siga.R |only dmm-3.1-1/dmm/R/fgls.update.R |only dmm-3.1-1/dmm/R/ginvipk.R |only dmm-3.1-1/dmm/R/gls.iter.b.R | 84 ++++++++++++++++++++---- dmm-3.1-1/dmm/R/gprint.dmm.R | 30 ++++---- dmm-3.1-1/dmm/R/gsummary.dmm.R | 10 +- dmm-3.1-1/dmm/R/gsummary_specific.R | 12 +-- dmm-3.1-1/dmm/R/kmat.R |only dmm-3.1-1/dmm/R/make.csummarytables.R | 4 - dmm-3.1-1/dmm/R/make.gsummarytables.R | 4 - dmm-3.1-1/dmm/R/plot.dmm.R | 14 ++-- dmm-3.1-1/dmm/R/print.csummary.dmm.R | 6 - dmm-3.1-1/dmm/R/print.csumspecific.dmm.R | 6 - dmm-3.1-1/dmm/R/print.dmm.R | 18 ++--- dmm-3.1-1/dmm/R/print.gsummary.dmm.R | 14 ++-- dmm-3.1-1/dmm/R/print.gsumspecific.dmm.R | 6 - dmm-3.1-1/dmm/R/print.summary.dmm.R | 6 - dmm-3.1-1/dmm/R/rowstack.R |only dmm-3.1-1/dmm/R/siga.posdef.R | 2 dmm-3.1-1/dmm/R/summary.dmm.R | 8 +- dmm-3.1-1/dmm/inst/doc/bugs.txt | 5 + dmm-3.1-1/dmm/inst/doc/dmmClassSpecific.pdf |binary dmm-3.1-1/dmm/inst/doc/dmmOverview.pdf |binary dmm-3.1-1/dmm/inst/doc/dmmSolveDME.pdf |only dmm-3.1-1/dmm/inst/doc/dyadicerrorcov.pdf |only dmm-3.1-1/dmm/inst/doc/mods.txt | 8 +- dmm-3.1-1/dmm/man/csummary.dmm.Rd | 10 +- dmm-3.1-1/dmm/man/dmm-internal.Rd | 53 ++++++++++----- dmm-3.1-1/dmm/man/dmm-package.Rd | 13 ++- dmm-3.1-1/dmm/man/dmm.Rd | 56 +++++++++------- dmm-3.1-1/dmm/man/gprint.dmm.Rd | 6 - dmm-3.1-1/dmm/man/gsummary.dmm.Rd | 14 ++-- dmm-3.1-1/dmm/man/plot.dmm.Rd | 8 +- dmm-3.1-1/dmm/man/print.dmm.Rd | 6 - dmm-3.1-1/dmm/man/summary.dmm.Rd | 10 +- 55 files changed, 439 insertions(+), 276 deletions(-)
Title: Fast and Efficient Processing of PAM Data
Description: Processing Chlorophyll Fluorescence & P700 Absorbance data generated by WALZ hardware. Four models are provided for the regression of Pi curves, which can be compared with each other in order to select the most suitable model for the data set. Control plots ensure the successful verification of each regression. Bundled output of alpha, ETRmax, Ik etc. enables fast and reliable further processing of the data.
Author: Julien Boehm [cre, aut] ,
Philipp Schrag [aut]
Maintainer: Julien Boehm <julien.boehm@uni-rostock.de>
Diff between pam versions 1.0.1 dated 2025-01-15 and 1.0.2 dated 2025-02-25
DESCRIPTION | 10 ++-- MD5 | 28 ++++++------ R/combo_plot_control.R | 4 - R/compare_regression_models.R | 21 ++++----- R/eilers_peeters.R | 38 ++++++++++------- R/platt.R | 32 ++++++++------ R/validation.R | 4 + R/vollenweider.R | 24 +++++++--- R/walsby.R | 12 ++++- build/partial.rdb |binary tests/testthat/Rplots.pdf |binary tests/testthat/results/test_combo_plot_control.jpg |binary tests/testthat/test-compare_regression_models_etr_I.R | 16 +++---- tests/testthat/test-compare_regression_models_etr_II.R | 12 ++--- tests/testthat/test-compare_regression_models_total.R | 16 +++---- 15 files changed, 126 insertions(+), 91 deletions(-)
Title: Composite-Based Structural Equation Modeling
Description: Estimate, assess, test, and study linear, nonlinear, hierarchical
and multigroup structural equation models using composite-based approaches
and procedures, including estimation techniques such as partial least squares
path modeling (PLS-PM) and its derivatives (PLSc, ordPLSc, robustPLSc),
generalized structured component analysis (GSCA), generalized structured
component analysis with uniqueness terms (GSCAm), generalized canonical
correlation analysis (GCCA), principal component analysis (PCA),
factor score regression (FSR) using sum score, regression or
Bartlett scores (including bias correction using Croon’s approach),
as well as several tests and typical postestimation procedures
(e.g., verify admissibility of the estimates, assess the model fit,
test the model fit etc.).
Author: Manuel E. Rademaker [aut] ,
Florian Schuberth [aut, cre] ,
Tamara Schamberger [ctb] ,
Michael Klesel [ctb] ,
Huu Phuc Nguyen [ctb] ,
Theo K. Dijkstra [ctb],
Joerg Henseler [ctb]
Maintainer: Florian Schuberth <f.schuberth@utwente.nl>
Diff between cSEM versions 0.5.0 dated 2022-11-24 and 0.6.0 dated 2025-02-25
cSEM-0.5.0/cSEM/build/cSEM.pdf |only cSEM-0.5.0/cSEM/inst/REFERENCES.bib.sav.tmp |only cSEM-0.6.0/cSEM/DESCRIPTION | 38 cSEM-0.6.0/cSEM/MD5 | 127 +-- cSEM-0.6.0/cSEM/NAMESPACE | 5 cSEM-0.6.0/cSEM/R/00_csem.R | 16 cSEM-0.6.0/cSEM/R/csem_model.R | 4 cSEM-0.6.0/cSEM/R/csem_resample.R | 6 cSEM-0.6.0/cSEM/R/exportToExcel.R | 10 cSEM-0.6.0/cSEM/R/helper_assess.R | 172 +++- cSEM-0.6.0/cSEM/R/helper_csem.R | 2 cSEM-0.6.0/cSEM/R/helper_estimators_weights.R | 14 cSEM-0.6.0/cSEM/R/helper_foreman.R | 11 cSEM-0.6.0/cSEM/R/helper_plot.cSEMResults.R |only cSEM-0.6.0/cSEM/R/helper_predict.R | 3 cSEM-0.6.0/cSEM/R/helper_savePlot.R |only cSEM-0.6.0/cSEM/R/helper_summarize.R | 93 +- cSEM-0.6.0/cSEM/R/plot.cSEMResult.R |only cSEM-0.6.0/cSEM/R/postestimate_assess.R | 32 cSEM-0.6.0/cSEM/R/postestimate_predict.R | 4 cSEM-0.6.0/cSEM/R/postestimate_savePlot.R |only cSEM-0.6.0/cSEM/R/postestimate_summarize.R | 30 cSEM-0.6.0/cSEM/R/postestimate_test_OMF.R | 2 cSEM-0.6.0/cSEM/R/zz_arguments.R | 66 + cSEM-0.6.0/cSEM/README.md | 328 ++++---- cSEM-0.6.0/cSEM/build/partial.rdb |binary cSEM-0.6.0/cSEM/build/stage23.rdb |only cSEM-0.6.0/cSEM/build/vignette.rds |binary cSEM-0.6.0/cSEM/inst/CITATION | 12 cSEM-0.6.0/cSEM/inst/REFERENCES.bib | 23 cSEM-0.6.0/cSEM/inst/doc/Notation.Rmd | 6 cSEM-0.6.0/cSEM/inst/doc/Notation.html | 29 cSEM-0.6.0/cSEM/inst/doc/Terminology.Rmd | 34 cSEM-0.6.0/cSEM/inst/doc/Terminology.html | 43 - cSEM-0.6.0/cSEM/inst/doc/Using-assess.R | 32 cSEM-0.6.0/cSEM/inst/doc/Using-assess.Rmd | 24 cSEM-0.6.0/cSEM/inst/doc/Using-assess.html | 74 - cSEM-0.6.0/cSEM/inst/doc/cSEM.R | 258 +++--- cSEM-0.6.0/cSEM/inst/doc/cSEM.Rmd | 97 +- cSEM-0.6.0/cSEM/inst/doc/cSEM.html | 586 +++++++-------- cSEM-0.6.0/cSEM/inst/examples/example_plot.cSEMResults.R |only cSEM-0.6.0/cSEM/man/assess.Rd | 32 cSEM-0.6.0/cSEM/man/buildDotCode.Rd |only cSEM-0.6.0/cSEM/man/cSEM-package.Rd | 7 cSEM-0.6.0/cSEM/man/calculateAVE.Rd | 2 cSEM-0.6.0/cSEM/man/calculateDf.Rd | 2 cSEM-0.6.0/cSEM/man/calculateEffects.Rd | 2 cSEM-0.6.0/cSEM/man/calculateFLCriterion.Rd | 2 cSEM-0.6.0/cSEM/man/calculateMAE.Rd | 2 cSEM-0.6.0/cSEM/man/calculateRelativeGoF.Rd |only cSEM-0.6.0/cSEM/man/calculatef2.Rd | 2 cSEM-0.6.0/cSEM/man/check_connection.Rd |only cSEM-0.6.0/cSEM/man/cleanNode.Rd |only cSEM-0.6.0/cSEM/man/csem.Rd | 16 cSEM-0.6.0/cSEM/man/csem_arguments.Rd | 20 cSEM-0.6.0/cSEM/man/exportToExcel.Rd | 10 cSEM-0.6.0/cSEM/man/figures/api.png |binary cSEM-0.6.0/cSEM/man/firstOrderMeasurementEdges.Rd |only cSEM-0.6.0/cSEM/man/fit_measures.Rd | 4 cSEM-0.6.0/cSEM/man/get_significance_stars.Rd |only cSEM-0.6.0/cSEM/man/plot.cSEMResults_2ndorder.Rd |only cSEM-0.6.0/cSEM/man/plot.cSEMResults_default.Rd |only cSEM-0.6.0/cSEM/man/plot.cSEMResults_multi.Rd |only cSEM-0.6.0/cSEM/man/reliability.Rd | 6 cSEM-0.6.0/cSEM/man/resampleData.Rd | 2 cSEM-0.6.0/cSEM/man/resamplecSEMResults.Rd | 4 cSEM-0.6.0/cSEM/man/savePlot.Rd |only cSEM-0.6.0/cSEM/man/save_single_plot.Rd |only cSEM-0.6.0/cSEM/man/secondOrderMeasurementEdges.Rd |only cSEM-0.6.0/cSEM/tests/spelling.R |only cSEM-0.6.0/cSEM/tests/testthat/test-csem.r | 34 cSEM-0.6.0/cSEM/vignettes/Notation.Rmd | 6 cSEM-0.6.0/cSEM/vignettes/Terminology.Rmd | 34 cSEM-0.6.0/cSEM/vignettes/Using-assess.Rmd | 24 cSEM-0.6.0/cSEM/vignettes/cSEM.Rmd | 97 +- 75 files changed, 1381 insertions(+), 1108 deletions(-)
Title: Automatic Knowledge Classification
Description: A tidy framework for automatic knowledge classification and visualization. Currently, the core functionality of the framework is mainly supported by modularity-based clustering (community detection) in keyword co-occurrence network, and focuses on co-word analysis of bibliometric research. However, the designed functions in 'akc' are general, and could be extended to solve other tasks in text mining as well.
Author: Tian-Yuan Huang [aut, cre]
Maintainer: Tian-Yuan Huang <huang.tian-yuan@qq.com>
Diff between akc versions 0.9.9 dated 2023-01-06 and 0.9.9.1 dated 2025-02-25
DESCRIPTION | 8 MD5 | 26 +- NAMESPACE | 12 + R/global_variable.R | 2 R/keyword_merge.R | 2 build/vignette.rds |binary inst/CITATION | 5 inst/doc/Benchmarking.R | 94 ++++----- inst/doc/Benchmarking.html | 271 ++++++++++++++------------- inst/doc/akc_vignette.R | 4 inst/doc/akc_vignette.html | 392 ++++++++++++++++++++-------------------- inst/doc/tutorial_raw_text.R | 2 inst/doc/tutorial_raw_text.html | 274 +++++++++++++-------------- man/keyword_merge.Rd | 2 14 files changed, 558 insertions(+), 536 deletions(-)
Title: Watch the File System for Changes
Description: R binding for 'libfswatch', a file system monitoring library. Watch
files, or directories recursively, for changes in the background. Log
activity, or run an R function every time a change event occurs.
Author: Charlie Gao [aut, cre] ,
Posit Software, PBC [cph]
Maintainer: Charlie Gao <charlie.gao@shikokuchuo.net>
Diff between watcher versions 0.1.1 dated 2025-02-10 and 0.1.2 dated 2025-02-25
watcher-0.1.1/watcher/src/fswatch-1.19.0.tar.gz |only watcher-0.1.2/watcher/DESCRIPTION | 11 +--- watcher-0.1.2/watcher/MD5 | 22 ++++---- watcher-0.1.2/watcher/NEWS.md | 5 + watcher-0.1.2/watcher/R/watch.R | 59 +++++++++++++--------- watcher-0.1.2/watcher/R/watcher-package.R | 4 - watcher-0.1.2/watcher/README.md | 20 ++++--- watcher-0.1.2/watcher/configure | 9 ++- watcher-0.1.2/watcher/configure.win | 8 ++ watcher-0.1.2/watcher/man/watcher-package.Rd | 4 - watcher-0.1.2/watcher/man/watcher.Rd | 35 ++++++++----- watcher-0.1.2/watcher/src/fswatch-5c443d2.tar.gz |only watcher-0.1.2/watcher/tests/testthat/test-watch.R | 15 ++--- 13 files changed, 116 insertions(+), 76 deletions(-)
Title: Expiry Estimation Procedures
Description: The Australian Regulatory Guidelines for Prescription
Medicines (ARGPM), guidance on "Stability testing for prescription
medicines", recommends to predict the shelf life of chemically derived
medicines from stability data by taking the worst case situation at batch
release into account. Consequently, if a change over time is observed,
a release limit needs to be specified. Finding a release limit and the
associated shelf life is supported, as well as the standard approach
that is recommended by guidance Q1E "Evaluation of stability data"
from the International Council for Harmonisation (ICH).
Author: Pius Dahinden [aut, cre],
Tillotts Pharma AG [cph, fnd]
Maintainer: Pius Dahinden <pius.dahinden@tillotts.com>
Diff between expirest versions 0.1.6 dated 2024-03-25 and 0.1.7 dated 2025-02-25
expirest-0.1.6/expirest/README.md |only expirest-0.1.6/expirest/man/check_ancova.Rd |only expirest-0.1.6/expirest/man/compile_wisle_summary.Rd |only expirest-0.1.6/expirest/man/extract_from_ll_wcsl.Rd |only expirest-0.1.6/expirest/man/extract_wc_x.Rd |only expirest-0.1.6/expirest/man/find_poi.Rd |only expirest-0.1.6/expirest/man/get_arrow.Rd |only expirest-0.1.6/expirest/man/get_distance.Rd |only expirest-0.1.6/expirest/man/get_hlines.Rd |only expirest-0.1.6/expirest/man/get_icpt.Rd |only expirest-0.1.6/expirest/man/get_icpt_list.Rd |only expirest-0.1.6/expirest/man/get_intvl_limit.Rd |only expirest-0.1.6/expirest/man/get_model_list.Rd |only expirest-0.1.6/expirest/man/get_n_list_levels.Rd |only expirest-0.1.6/expirest/man/get_n_whole_part.Rd |only expirest-0.1.6/expirest/man/get_osle_poi_list.Rd |only expirest-0.1.6/expirest/man/get_poi_list.Rd |only expirest-0.1.6/expirest/man/get_predictions.Rd |only expirest-0.1.6/expirest/man/get_relevant_limits.Rd |only expirest-0.1.6/expirest/man/get_segments.Rd |only expirest-0.1.6/expirest/man/get_text_annotation.Rd |only expirest-0.1.6/expirest/man/get_variable_list.Rd |only expirest-0.1.6/expirest/man/get_vlines.Rd |only expirest-0.1.6/expirest/man/get_wc_icpt.Rd |only expirest-0.1.6/expirest/man/get_wcs_limit.Rd |only expirest-0.1.6/expirest/man/get_wisle_poi_list.Rd |only expirest-0.1.6/expirest/man/get_xformed_variables.Rd |only expirest-0.1.6/expirest/man/print_val.Rd |only expirest-0.1.6/expirest/man/set_limits.Rd |only expirest-0.1.6/expirest/man/try_get_model.Rd |only expirest-0.1.7/expirest/DESCRIPTION | 8 - expirest-0.1.7/expirest/MD5 | 63 ++-------- expirest-0.1.7/expirest/NEWS.md | 17 ++ expirest-0.1.7/expirest/R/error_handling.R | 1 expirest-0.1.7/expirest/R/expirest_osle.R | 16 +- expirest-0.1.7/expirest/R/expirest_wisle.R | 5 expirest-0.1.7/expirest/R/sysdata.rda |only expirest-0.1.7/expirest/R/utility.R | 60 +++++++++ expirest-0.1.7/expirest/man/expirest_osle.Rd | 16 +- expirest-0.1.7/expirest/man/expirest_wisle.Rd | 16 +- expirest-0.1.7/expirest/man/figures/README-example-1-1.png |binary expirest-0.1.7/expirest/man/figures/README-example-2-1-1.png |binary expirest-0.1.7/expirest/man/figures/README-example-2-2-1.png |binary expirest-0.1.7/expirest/man/figures/README-example-2-3-1.png |binary expirest-0.1.7/expirest/man/figures/README-example-3-1-1.png |binary expirest-0.1.7/expirest/tests/testthat/test-check_ancova.R | 12 + expirest-0.1.7/expirest/tests/testthat/test-plot_expirest_osle.R | 2 expirest-0.1.7/expirest/tests/testthat/test-plot_expirest_wisle.R | 7 - 48 files changed, 141 insertions(+), 82 deletions(-)
Title: Analysis of Check-All-that-Apply (CATA) Data
Description: Package contains functions for analyzing check-all-that-apply (CATA) data from consumer and sensory tests. Cochran's Q test, McNemar's test, and Penalty-Lift analysis are provided; for details, see Meyners, Castura & Carr (2013) <doi:10.1016/j.foodqual.2013.06.010>. Cluster analysis can be performed using b-cluster analysis, then evaluated using various measures; for details, see Castura, Meyners, Varela & Næs (2022) <doi:10.1016/j.foodqual.2022.104564>. Methods are adapted to cluster consumers based on their product-related hedonic responses; for details, see Castura, Meyners, Pohjanheimo, Varela & Næs (2023) <doi:10.1111/joss.12860>. Permutation tests based on the L1-norm methods are provided; for details, see Chaya, Castura & Greenacre (2025) <doi:10.48550/arXiv.2502.15945>.
Author: J.C. Castura [aut, cre, ctb]
Maintainer: J.C. Castura <jcastura@compusense.com>
Diff between cata versions 0.1.0.26 dated 2025-02-17 and 0.1.0.27 dated 2025-02-25
cata-0.1.0.26/cata/R/cata-internal.R |only cata-0.1.0.27/cata/DESCRIPTION | 10 ++-- cata-0.1.0.27/cata/MD5 | 53 +++++++++++------------ cata-0.1.0.27/cata/R/cata.R | 28 ++++++++---- cata-0.1.0.27/cata/R/evalClusterQuality.R | 4 + cata-0.1.0.27/cata/R/ocov.R | 16 ++++-- cata-0.1.0.27/cata/R/plift.R | 1 cata-0.1.0.27/cata/data/squashes.rda |only cata-0.1.0.27/cata/man/ARI.Rd | 3 + cata-0.1.0.27/cata/man/barray.Rd | 3 + cata-0.1.0.27/cata/man/bcluster.Rd | 3 + cata-0.1.0.27/cata/man/bcluster.h.Rd | 3 + cata-0.1.0.27/cata/man/bcluster.n.Rd | 3 + cata-0.1.0.27/cata/man/bread.Rd | 27 +++++++---- cata-0.1.0.27/cata/man/cochranQ.Rd | 3 + cata-0.1.0.27/cata/man/code.topk.Rd | 3 + cata-0.1.0.27/cata/man/evaluateClusterQuality.Rd | 3 + cata-0.1.0.27/cata/man/getb.Rd | 3 + cata-0.1.0.27/cata/man/inspect.Rd | 3 + cata-0.1.0.27/cata/man/mad.dist.Rd | 8 ++- cata-0.1.0.27/cata/man/madperm.Rd | 8 ++- cata-0.1.0.27/cata/man/mcnemarQ.Rd | 6 ++ cata-0.1.0.27/cata/man/plift.Rd | 3 + cata-0.1.0.27/cata/man/rv.coef.Rd | 4 + cata-0.1.0.27/cata/man/salton.Rd | 3 + cata-0.1.0.27/cata/man/selectionPlot.Rd | 3 + cata-0.1.0.27/cata/man/squashes.Rd |only cata-0.1.0.27/cata/man/toWideMatrix.Rd | 3 + cata-0.1.0.27/cata/man/topc.Rd | 3 + 29 files changed, 150 insertions(+), 60 deletions(-)
Title: C++ Interface to PostgreSQL
Description: Fully DBI-compliant C++-backed interface to PostgreSQL
<https://www.postgresql.org/>, an open-source relational database.
Author: Hadley Wickham [aut],
Jeroen Ooms [aut],
Kirill Mueller [aut, cre] ,
RStudio [cph],
R Consortium [fnd],
Tomoaki Nishiyama [ctb]
Maintainer: Kirill Mueller <kirill@cynkra.com>
Diff between RPostgres versions 1.4.7 dated 2024-05-27 and 1.4.8 dated 2025-02-25
DESCRIPTION | 10 MD5 | 55 ++--- NAMESPACE | 2 NEWS.md | 11 + R/PqConnection.R | 33 +++ R/cpp11.R | 4 build/vignette.rds |binary inst/doc/work-queue.R | 342 ++++++++++++++++---------------- inst/doc/work-queue.Rmd | 2 inst/doc/work-queue.html | 5 man/Postgres.Rd | 2 man/RPostgres-package.Rd | 4 man/postgres-query.Rd | 6 man/postgres-tables.Rd | 10 man/postgres-transactions.Rd | 2 man/postgresHasDefault.Rd | 2 man/postgresImportLargeObject.Rd |only man/postgresIsTransacting.Rd | 2 man/postgresWaitForNotify.Rd | 2 man/quote.Rd | 2 src/DbConnection.cpp | 6 src/DbConnection.h | 3 src/Makevars.win | 22 +- src/connection.cpp | 4 src/cpp11.cpp | 60 +++-- src/pch.h | 1 tests/testthat/data |only tests/testthat/test-ImportLargeObject.R |only tools/winlibs.R | 6 vignettes/work-queue.Rmd | 2 30 files changed, 343 insertions(+), 257 deletions(-)