Title: Automated Selection and Visualisation of Statistical Hypothesis
Tests
Description: Automatically selects and visualises appropriate statistical
hypothesis tests between a response and a feature variable in a data frame.
The choice of test depends on the class, distribution, and sample size of the
input variables, as well as the user-defined 'conf.level'. Well suited for
web-based or server-side R applications.
Implemented tests: t.test(), wilcox.test(), aov(),
oneway.test(), kruskal.test(), lm(), fisher.test(), chisq.test().
Tests for normality: shapiro.test(), ad.test(). Tests for equal
variances: bartlett.test(). Post-hoc tests: TukeyHSD(),
pairwise.wilcox.test().
Author: Sabine Schilling [cre, aut, cph] ,
Peter Kauf [ctb]
Maintainer: Sabine Schilling <sabineschilling@gmx.ch>
Diff between visStatistics versions 0.1.2 dated 2025-05-12 and 0.1.3 dated 2025-05-12
DESCRIPTION | 9 +- MD5 | 16 ++-- R/test_and_visuals.R | 2 inst/doc/visStatistics.Rmd | 62 ++++++++++++----- inst/doc/visStatistics.html | 112 ++++++++++++++++++++----------- man/figures/README-unnamed-chunk-2-1.png |binary man/figures/README-unnamed-chunk-4-1.png |binary man/figures/README-unnamed-chunk-5-1.png |binary vignettes/visStatistics.Rmd | 62 ++++++++++++----- 9 files changed, 181 insertions(+), 82 deletions(-)
Title: Diagnostic Tools for Hierarchical (Multilevel) Linear Models
Description: A suite of diagnostic tools for hierarchical
(multilevel) linear models. The tools include
not only leverage and traditional deletion diagnostics (Cook's
distance, covratio, covtrace, and MDFFITS) but also
convenience functions and graphics for residual analysis. Models
can be fit using either lmer in the 'lme4' package or lme in the 'nlme' package.
Author: Adam Loy [cre, aut],
Jaylin Lowe [aut],
Jack Moran [aut]
Maintainer: Adam Loy <loyad01@gmail.com>
Diff between HLMdiag versions 0.5.0 dated 2021-05-02 and 0.5.1 dated 2025-05-12
HLMdiag-0.5.0/HLMdiag/NEWS |only HLMdiag-0.5.0/HLMdiag/man/hlm_influence.lmerMod.Rd |only HLMdiag-0.5.0/HLMdiag/man/hlm_resid.lmerMod.Rd |only HLMdiag-0.5.1/HLMdiag/DESCRIPTION | 8 HLMdiag-0.5.1/HLMdiag/MD5 | 64 HLMdiag-0.5.1/HLMdiag/NAMESPACE | 1 HLMdiag-0.5.1/HLMdiag/NEWS.md |only HLMdiag-0.5.1/HLMdiag/R/case_delete.R | 2 HLMdiag-0.5.1/HLMdiag/R/diagnostic_functions.R | 127 - HLMdiag-0.5.1/HLMdiag/R/help.R | 3 HLMdiag-0.5.1/HLMdiag/R/hlm_augment.R | 34 HLMdiag-0.5.1/HLMdiag/R/hlm_influence.R | 32 HLMdiag-0.5.1/HLMdiag/R/hlm_resid.R | 37 HLMdiag-0.5.1/HLMdiag/R/influence_functions.R | 272 +-- HLMdiag-0.5.1/HLMdiag/R/radon.R | 2 HLMdiag-0.5.1/HLMdiag/R/rotate_ranefs.R | 14 HLMdiag-0.5.1/HLMdiag/README.md | 90 - HLMdiag-0.5.1/HLMdiag/build/vignette.rds |binary HLMdiag-0.5.1/HLMdiag/inst/CITATION | 29 HLMdiag-0.5.1/HLMdiag/inst/doc/hlm_resid.html | 1222 +++++++++----- HLMdiag-0.5.1/HLMdiag/inst/doc/influence_diagnostics.Rmd | 2 HLMdiag-0.5.1/HLMdiag/inst/doc/influence_diagnostics.html | 1033 ++++++++--- HLMdiag-0.5.1/HLMdiag/inst/doc/jss_update.html | 751 +++++--- HLMdiag-0.5.1/HLMdiag/man/HLMdiag.Rd | 19 HLMdiag-0.5.1/HLMdiag/man/cooks.distance.Rd | 12 HLMdiag-0.5.1/HLMdiag/man/covratio.Rd | 18 HLMdiag-0.5.1/HLMdiag/man/hlm_augment.Rd | 14 HLMdiag-0.5.1/HLMdiag/man/hlm_influence.Rd |only HLMdiag-0.5.1/HLMdiag/man/hlm_resid.Rd |only HLMdiag-0.5.1/HLMdiag/man/leverage.mer.Rd | 10 HLMdiag-0.5.1/HLMdiag/man/radon.Rd | 3 HLMdiag-0.5.1/HLMdiag/man/rvc.mer.Rd | 10 HLMdiag-0.5.1/HLMdiag/man/wages.Rd | 2 HLMdiag-0.5.1/HLMdiag/src/Makevars | 5 HLMdiag-0.5.1/HLMdiag/src/Makevars.win | 4 HLMdiag-0.5.1/HLMdiag/vignettes/influence_diagnostics.Rmd | 2 36 files changed, 2483 insertions(+), 1339 deletions(-)
Title: Simulate Expression Data from 'igraph' Networks
Description: Functions to develop simulated continuous data (e.g., gene expression) from a sigma covariance matrix derived from a graph structure in 'igraph' objects. Intended to extend 'mvtnorm' to take 'igraph' structures rather than sigma matrices as input. This allows the use of simulated data that correctly accounts for pathway relationships and correlations. This allows the use of simulated data that correctly accounts for pathway relationships and correlations. Here we present a versatile statistical framework to simulate correlated gene expression data from biological pathways, by sampling from a multivariate normal distribution derived from a graph structure. This package allows the simulation of biological pathways from a graph structure based on a statistical model of gene expression. For example methods to infer biological pathways and gene regulatory networks from gene expression data can be tested on simulated datasets using this framework. This also allows for pathway structures to [...truncated...]
Author: S. Thomas Kelly [aut, cre],
Michael A. Black [aut, ths],
Robrecht Cannoodt [ctb],
Jason Cory Brunson [ctb]
Maintainer: S. Thomas Kelly <tomkellygenetics@gmail.com>
Diff between graphsim versions 1.0.3 dated 2022-09-12 and 1.0.4 dated 2025-05-12
graphsim-1.0.3/graphsim/inst/resources/css/highlight/github.css |only graphsim-1.0.4/graphsim/DESCRIPTION | 10 +- graphsim-1.0.4/graphsim/MD5 | 15 +-- graphsim-1.0.4/graphsim/NAMESPACE | 1 graphsim-1.0.4/graphsim/NEWS.md | 9 + graphsim-1.0.4/graphsim/R/plot_directed.R | 26 +++-- graphsim-1.0.4/graphsim/build/partial.rdb |binary graphsim-1.0.4/graphsim/inst/CITATION | 46 ++++------ graphsim-1.0.4/graphsim/man/plot_directed.Rd | 9 + 9 files changed, 61 insertions(+), 55 deletions(-)
Title: Constrained Generalized Additive Model
Description: A constrained generalized additive model is fitted by the cgam routine. Given a set of predictors, each of which may have a shape or order restrictions, the maximum likelihood estimator for the constrained generalized additive model is found using an iteratively re-weighted cone projection algorithm. The ShapeSelect routine chooses a subset of predictor variables and describes the component relationships with the response. For each predictor, the user needs only specify a set of possible shape or order restrictions. A model selection method chooses the shapes and orderings of the relationships as well as the variables. The cone information criterion (CIC) is used to select the best combination of variables and shapes. A genetic algorithm may be used when the set of possible models is large. In addition, the cgam routine implements a two-dimensional isotonic regression using warped-plane splines without additivity assumptions. It can also fit a convex or concave regression surface with [...truncated...]
Author: Mary Meyer [aut],
Xiyue Liao [aut, cre]
Maintainer: Xiyue Liao <xliao@sdsu.edu>
Diff between cgam versions 1.26 dated 2025-04-28 and 1.27 dated 2025-05-12
ChangeLog | 6 - DESCRIPTION | 10 - MD5 | 19 +-- NAMESPACE | 10 + R/cgam.R | 236 +++++++++++++++++++---------------------------- R/cgamm.R | 31 +++++- R/globals.R | 4 R/testpar.R | 41 ++++---- man/cgam.Rd | 6 - man/plotpersp.Rd | 81 ++++++---------- man/plotpersp_control.Rd |only 11 files changed, 215 insertions(+), 229 deletions(-)
Title: Utilities for the Forest Research Institute of the State
Baden-Wuerttemberg
Description: Miscellaneous utilities, tools and helper
functions for finding and searching files on disk, searching for and
removing R objects from the workspace.
Does not import or depend on any third party package, but on core R
only (i.e. it may depend on packages with priority 'base').
Author: Andreas Dominik Cullmann [aut, cre]
Maintainer: Andreas Dominik Cullmann <fvafrcu@mailbox.org>
Diff between fritools versions 4.4.0 dated 2024-12-16 and 4.5.0 dated 2025-05-12
DESCRIPTION | 6 MD5 | 188 +++++++++++---------- NAMESPACE | 5 NEWS.md | 8 R/char2factor.R | 2 R/escape_non_ascii.R |only R/file_string.R |only R/is_convertible2numeric.R |only R/is_scalar.R |only R/is_true.R |only R/test_helpers.R | 4 build/vignette.rds |binary inst/NEWS.rd | 10 + inst/doc/Not_an_Introduction_to_fritools.pdf |binary inst/source/R/batch.R | 23 +- inst/source/R/boolean.R | 5 inst/source/R/char2factor.R |only inst/source/R/clipboard_path.R | 2 inst/source/R/convert_umlauts_to_ascii.R | 16 - inst/source/R/convert_umlauts_to_tex.R | 14 - inst/source/R/csv.R | 8 inst/source/R/delete_trailing_blank_lines.R | 2 inst/source/R/delete_trailing_whitespace.R | 2 inst/source/R/develop_test.R | 10 - inst/source/R/file_copy.R | 2 inst/source/R/file_string.R |only inst/source/R/find_files.R | 14 + inst/source/R/fritools-package.R | 2 inst/source/R/get_german_umlauts.R |only inst/source/R/get_lines_between_tags.R |only inst/source/R/get_session_string.R |only inst/source/R/grep_file.R |only inst/source/R/installed.R | 2 inst/source/R/is_cran.R | 2 inst/source/R/is_r_cmd_check.R | 2 inst/source/R/memory_hogs.R | 7 inst/source/R/paths.R | 2 inst/source/R/pause.R |only inst/source/R/r.R | 2 inst/source/R/relative_difference.R | 31 ++- inst/source/R/rename_package.R |only inst/source/R/rownames2col.R |only inst/source/R/runsed.R |only inst/source/R/sloboba.R |only inst/source/R/split_code_file.R | 9 - inst/source/R/string2words.R |only inst/source/R/test_helpers.R | 19 +- inst/source/R/vim.R | 2 inst/source/R/weighted_variance.R | 1 inst/source/R/wipe_clean.R | 4 inst/source/R/wipe_tempdir.R | 9 - inst/tinytest/test_escape_non_ascii.R |only inst/tinytest/test_is_scalar.R |only inst/tinytest/test_is_scalar_convertible2numeric.R |only inst/tinytest/test_is_true.R |only inst/tinytest/test_runsed.R | 4 man/char2factor.Rd | 17 - man/clipboard_path.Rd | 1 man/delete_trailing_blank_lines.Rd | 1 man/delete_trailing_whitespace.Rd | 1 man/develop_test.Rd | 1 man/escape_non_ascii.Rd |only man/file_copy.Rd | 1 man/file_modified_last.Rd | 1 man/file_save.Rd | 1 man/file_string.Rd |only man/find_files.Rd | 1 man/get_lines_between_tags.Rd | 1 man/get_mtime.Rd | 1 man/get_run_r_tests.Rd | 3 man/get_unique_string.Rd | 1 man/golden_ratio.Rd | 1 man/grep_file.Rd | 1 man/is_batch.Rd | 3 man/is_cran.Rd | 3 man/is_difftime_less.Rd | 1 man/is_false.Rd | 3 man/is_files_current.Rd | 1 man/is_force.Rd | 3 man/is_installed.Rd | 3 man/is_not_false.Rd | 3 man/is_null_or_true.Rd | 3 man/is_of_length_zero.Rd | 3 man/is_path.Rd | 1 man/is_r_cmd_check.Rd | 3 man/is_r_package_installed.Rd | 3 man/is_running_on_fvafrcu_machines.Rd | 3 man/is_running_on_gitlab_com.Rd | 3 man/is_scalar.Rd |only man/is_scalar_convertible2numeric.Rd |only man/is_success.Rd | 3 man/is_true.Rd |only man/is_valid_primary_key.Rd | 1 man/is_version_sufficient.Rd | 3 man/is_windows.Rd | 3 man/paths.Rd | 1 man/pause.Rd | 1 man/r_cmd_install.Rd | 1 man/rownames2col.Rd | 1 man/runsed.Rd | 1 man/search_files.Rd | 1 man/split_code_file.Rd | 1 man/str2num.Rd | 1 man/string2words.Rd | 1 man/strip_off_attributes.Rd | 1 man/tapply.Rd | 1 man/throw.Rd | 1 man/touch.Rd | 1 108 files changed, 307 insertions(+), 207 deletions(-)
Title: Fast Utilities for Year Month Day Objects
Description: A collection of utility functions for working with
Year Month Day objects. Includes functions for fast parsing of numeric
and character input based on algorithms described in Hinnant, H. (2021)
<https://howardhinnant.github.io/date_algorithms.html> as well as a branchless
calculation of leap years by Jerichaux (2025) <https://stackoverflow.com/a/79564914>.
Author: Tim Taylor [aut, cre] ,
Howard Hinnant [aut] ,
jerichaux [aut]
Maintainer: Tim Taylor <tim.taylor@hiddenelephants.co.uk>
Diff between fastymd versions 0.1.2 dated 2025-04-25 and 0.1.3 dated 2025-05-12
fastymd-0.1.2/fastymd/src/leapyear.c |only fastymd-0.1.2/fastymd/src/leapyear.h |only fastymd-0.1.3/fastymd/DESCRIPTION | 10 +++--- fastymd-0.1.3/fastymd/MD5 | 12 +++---- fastymd-0.1.3/fastymd/NEWS.md | 4 ++ fastymd-0.1.3/fastymd/inst/doc/fastymd.html | 44 +++++++++++++-------------- fastymd-0.1.3/fastymd/man/fastymd-package.Rd | 2 - fastymd-0.1.3/fastymd/src/api.c | 17 ++++++---- 8 files changed, 48 insertions(+), 41 deletions(-)
Title: Meteorological Data Processing
Description: Set of tools aimed at processing meteorological data, converting hourly recorded data to daily, monthly and annual data.
Author: Wagner Martins dos Santos [aut, cre] ,
Hoi Leong Lee [aut],
Edimir Xavier Leal Ferraz [aut] ,
Abelardo Antonio de Assuncao Montenegro [aut],
Lady Daiane Costa de Sousa Martins [aut] ,
Alan Cezar Bezerra [aut],
Ênio Farias de Franca e Silva [aut],
Thi [...truncated...]
Maintainer: Wagner Martins dos Santos <wagnnerms97@gmail.com>
Diff between DataMetProcess versions 1.0.4 dated 2025-04-05 and 1.0.5 dated 2025-05-12
DESCRIPTION | 18 +++++----- MD5 | 12 +++--- inst/CITATION |only inst/DataMetProcess_Shiny/App.R | 5 ++ inst/DataMetProcess_Shiny/materials/gas.png |only inst/DataMetProcess_Shiny/materials/load_materials.R | 5 +- inst/DataMetProcess_Shiny/partitions/ui_partitions/ui_about.R | 7 +++ inst/doc/DataMetProcess-vignette.html | 2 - 8 files changed, 30 insertions(+), 19 deletions(-)
More information about DataMetProcess at CRAN
Permanent link
Title: An 'SVG' Graphics Device
Description: A graphics device for R that produces 'Scalable Vector
Graphics'. 'svglite' is a fork of the older 'RSvgDevice' package.
Author: Hadley Wickham [aut],
Lionel Henry [aut],
Thomas Lin Pedersen [cre, aut] ,
T Jake Luciani [aut],
Matthieu Decorde [aut],
Vaudor Lise [aut],
Tony Plate [ctb] ,
David Gohel [ctb] ,
Yixuan Qiu [ctb] ,
Hakon Malmedal [ctb] ,
Posit Software, PBC [cph, fnd [...truncated...]
Maintainer: Thomas Lin Pedersen <thomas.pedersen@posit.co>
Diff between svglite versions 2.2.0 dated 2025-05-07 and 2.2.1 dated 2025-05-12
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 4 ++++ inst/doc/fonts.html | 25 +++++++++++++++---------- inst/doc/scaling.html | 4 ++-- src/SvgStream.h | 1 + 6 files changed, 30 insertions(+), 20 deletions(-)
Title: Spatially Aware Cell-Cell Interaction Analysis
Description: Provides tools for analyzing spatial cell-cell interactions based on ligand-receptor pairs, including functions for local, regional, and global analysis using spatial transcriptomics data. Integrates with databases like 'CellChat' <http://www.cellchat.org/>, 'CellPhoneDB' <https://www.cellphonedb.org/>, 'Cellinker' <https://www.rna-society.org/cellinker/index.html>, 'ICELLNET' <https://github.com/soumelis-lab/ICELLNET>, and 'ConnectomeDB' <https://humanconnectome.org/software/connectomedb/> to identify ligand-receptor pairs, visualize interactions through heatmaps, chord diagrams, and infer interactions on different spatial scales.
Author: Li-Ting Ku [aut, cre]
Maintainer: Li-Ting Ku <lku@mdanderson.org>
Diff between SpaCCI versions 1.0.3 dated 2025-01-18 and 1.0.4 dated 2025-05-12
DESCRIPTION | 10 ++--- MD5 | 14 ++++--- R/DB_dataframe.R |only R/database.R | 89 +++++++++++++++++++++++++++++++++++++++++++++- R/run_SpaCCI.R | 2 - data/DB_dataframe.rda |only man/DB_dataframe.Rd |only man/LR_database.Rd | 2 - man/run_SpaCCI.Rd | 2 - man/self_identified_LR.Rd |only 10 files changed, 105 insertions(+), 14 deletions(-)
Title: Helper Functions for 'mlr3'
Description: Frequently used helper functions and assertions used in
'mlr3' and its companion packages. Comes with helper functions for
functional programming, for printing, to work with 'data.table', as
well as some generally useful 'R6' classes. This package also
supersedes the package 'BBmisc'.
Author: Marc Becker [cre, aut] ,
Michel Lang [aut] ,
Patrick Schratz [aut]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3misc versions 0.16.0 dated 2024-11-28 and 0.17.0 dated 2025-05-12
DESCRIPTION | 51 ++++++++++++------------ MD5 | 71 ++++++++++++++++++---------------- NAMESPACE | 4 + NEWS.md | 10 ++++ R/Callback.R | 9 ++-- R/Dictionary.R | 4 - R/assert_ro_binding.R | 2 R/calculate_hash.R | 4 - R/cat_cli.R |only R/check_operators.R |only R/crate.R | 2 R/dictionary_sugar.R | 7 +-- R/did_you_mean.R | 2 R/get_private.R | 6 +- R/printf.R | 45 ++++++++++++++++++--- R/purrr_map.R | 7 +++ R/set_class.R | 2 R/set_params.R | 2 R/strip_srcrefs.R | 4 - man/as_callback.Rd | 4 - man/assert_ro_binding.Rd | 2 man/calculate_hash.Rd | 2 man/cat_cli.Rd |only man/check_operators.Rd |only man/compat-map.Rd | 4 + man/crate.Rd | 2 man/dictionary_sugar_get.Rd | 2 man/dictionary_sugar_inc_get.Rd | 4 - man/get_private-set.Rd | 4 - man/get_private.Rd | 2 man/hash_input.Rd | 2 man/mlr_callbacks.Rd | 2 man/printf.Rd | 27 +++++++++++- man/set_params.Rd | 2 man/strip_srcrefs.Rd | 4 - tests/testthat/test_Callback.R | 8 ++- tests/testthat/test_check_operators.R |only tests/testthat/test_map.R | 9 ++++ tests/testthat/test_printf.R | 22 ++++++++++ 39 files changed, 226 insertions(+), 108 deletions(-)
Title: Dynamic Model Averaging with Grid Search
Description: Perform dynamic model averaging with grid search as in Dangl and Halling (2012) <doi:10.1016/j.jfineco.2012.04.003> using parallel computing.
Author: Leopoldo Catania [aut, cre] ,
Nima Nonejad [ctb]
Maintainer: Leopoldo Catania <leopoldo.catania@econ.au.dk>
Diff between eDMA versions 1.5-3 dated 2018-08-27 and 1.5-4 dated 2025-05-12
ChangeLog | 22 ++++++----- DESCRIPTION | 16 ++++++-- MD5 | 18 ++++----- R/RcppExports.R | 38 +++++++++---------- README.md | 50 +++++++++++--------------- build/partial.rdb |binary man/USData.Rd | 64 ++++++++++++++++----------------- man/USRecessions.Rd | 42 ++++++++++----------- man/eDMA-package.Rd | 100 ++++++++++++++++++++++++++-------------------------- src/RcppExports.cpp | 5 ++ 10 files changed, 184 insertions(+), 171 deletions(-)
Title: Accessing Statistics Canada Data Table and Vectors
Description: Searches for, accesses, and retrieves Statistics Canada data
tables, as well as individual vectors, as tidy data frames.
This package enriches the tables with metadata, deals
with encoding issues, allows for bilingual English or French language data retrieval, and bundles
convenience functions to make it easier to work with retrieved table data. For more efficient data
access the package allows for caching data in a local database and database level filtering, data
manipulation and summarizing.
Author: Jens von Bergmann [aut, cre],
Dmitry Shkolnik [aut]
Maintainer: Jens von Bergmann <jens@mountainmath.ca>
Diff between cansim versions 0.4.1 dated 2025-03-15 and 0.4.2 dated 2025-05-12
DESCRIPTION | 8 MD5 | 61 ++- NAMESPACE | 3 NEWS.md | 16 R/cansim.R | 13 R/cansim_helpers.R | 39 ++ R/cansim_metadata.R | 223 +++++++++++++ R/cansim_parquet.R | 7 R/cansim_sql.R | 4 R/cansim_vectors.R | 413 +++++++++++++++---------- README.md | 20 - build/vignette.rds |binary inst/doc/cansim.R | 10 inst/doc/cansim.Rmd | 4 inst/doc/cansim.html | 6 inst/doc/partial_table_data_download.R |only inst/doc/partial_table_data_download.Rmd |only inst/doc/partial_table_data_download.html |only inst/doc/working_with_large_tables.R | 2 inst/doc/working_with_large_tables.Rmd | 10 inst/doc/working_with_large_tables.html | 68 ++-- man/add_cansim_vectors_to_template.Rd |only man/csv2sqlite.Rd | 2 man/get_cansim_data_for_table_coord_periods.Rd | 22 - man/get_cansim_series_info_cube_coord.Rd |only man/get_cansim_sqlite.Rd | 2 man/get_cansim_table_last_release_date.Rd | 2 man/get_cansim_table_template.Rd |only man/get_cansim_vector.Rd | 8 man/get_cansim_vector_for_latest_periods.Rd | 10 man/get_cansim_vector_info.Rd | 2 tests/testthat/test-data_consistency.R | 4 vignettes/cansim.Rmd | 4 vignettes/partial_table_data_download.Rmd |only vignettes/working_with_large_tables.Rmd | 10 35 files changed, 675 insertions(+), 298 deletions(-)
Title: Thematic Maps
Description: Thematic maps are geographical maps in which spatial data
distributions are visualized. This package offers a flexible,
layer-based, and easy to use approach to create thematic maps, such as
choropleths and bubble maps.
Author: Martijn Tennekes [aut, cre],
Jakub Nowosad [ctb],
Joel Gombin [ctb],
Sebastian Jeworutzki [ctb],
Kent Russell [ctb],
Richard Zijdeman [ctb],
John Clouse [ctb],
Robin Lovelace [ctb],
Jannes Muenchow [ctb],
Olivier Roy [ctb],
Edzer Pebesma [ctb],
Hugh [...truncated...]
Maintainer: Martijn Tennekes <mtennekes@gmail.com>
Diff between tmap versions 4.0 dated 2025-01-27 and 4.1 dated 2025-05-12
tmap-4.0/tmap/R/onLoad.R |only tmap-4.1/tmap/DESCRIPTION | 42 +- tmap-4.1/tmap/MD5 | 224 +++++++------ tmap-4.1/tmap/NAMESPACE | 29 + tmap-4.1/tmap/NEWS.md | 12 tmap-4.1/tmap/R/check_fix.R | 12 tmap-4.1/tmap/R/messages.R | 84 ++++- tmap-4.1/tmap/R/misc_comp.R |only tmap-4.1/tmap/R/misc_crs.R | 18 - tmap-4.1/tmap/R/misc_datetime.R |only tmap-4.1/tmap/R/misc_options.R | 3 tmap-4.1/tmap/R/misc_other.R | 21 - tmap-4.1/tmap/R/misc_stars.R | 4 tmap-4.1/tmap/R/misc_symbols.R | 21 - tmap-4.1/tmap/R/misc_text.R | 33 + tmap-4.1/tmap/R/print.R | 1 tmap-4.1/tmap/R/process_breaks.R | 20 - tmap-4.1/tmap/R/process_meta.R | 154 +++++---- tmap-4.1/tmap/R/qtm.R | 22 - tmap-4.1/tmap/R/spatial_stars.R | 5 tmap-4.1/tmap/R/step1_helper_facets.R | 168 +++++----- tmap-4.1/tmap/R/step1_helper_meta.R | 79 ---- tmap-4.1/tmap/R/step1_rearrange.R | 47 -- tmap-4.1/tmap/R/step2_data.R | 2 tmap-4.1/tmap/R/step2_helper_data.R | 90 +---- tmap-4.1/tmap/R/step2_helper_facets.R | 10 tmap-4.1/tmap/R/step3_trans.R | 85 +++-- tmap-4.1/tmap/R/step4_helper_legends.R | 3 tmap-4.1/tmap/R/step4_plot.R | 413 ++++++++++++++++--------- tmap-4.1/tmap/R/tm_add_legend.R | 10 tmap-4.1/tmap/R/tm_animate.R |only tmap-4.1/tmap/R/tm_chart.R | 65 ++- tmap-4.1/tmap/R/tm_comp_group.R |only tmap-4.1/tmap/R/tm_components.R | 72 ++-- tmap-4.1/tmap/R/tm_facets.R | 54 +-- tmap-4.1/tmap/R/tm_inset.R |only tmap-4.1/tmap/R/tm_layers_aux.R | 14 tmap-4.1/tmap/R/tm_layers_lines.R | 2 tmap-4.1/tmap/R/tm_layers_polygons.R | 17 - tmap-4.1/tmap/R/tm_layers_raster.R | 2 tmap-4.1/tmap/R/tm_layers_rgb.R | 1 tmap-4.1/tmap/R/tm_layers_symbols.R | 4 tmap-4.1/tmap/R/tm_layers_text.R | 4 tmap-4.1/tmap/R/tm_layout.R | 13 tmap-4.1/tmap/R/tm_legend.R | 10 tmap-4.1/tmap/R/tm_options.R | 12 tmap-4.1/tmap/R/tm_scale_.R | 1 tmap-4.1/tmap/R/tm_shape.R | 4 tmap-4.1/tmap/R/tm_vars.R | 14 tmap-4.1/tmap/R/tmapChart.R | 2 tmap-4.1/tmap/R/tmapGridAux.R | 119 +++++-- tmap-4.1/tmap/R/tmapGridComp.R | 237 +++++++------- tmap-4.1/tmap/R/tmapGridComp_funs.R | 194 +++++++++-- tmap-4.1/tmap/R/tmapGridComp_leg_landscape.R | 10 tmap-4.1/tmap/R/tmapGridComp_leg_portrait.R | 22 - tmap-4.1/tmap/R/tmapGridInit.R | 63 +++ tmap-4.1/tmap/R/tmapGridProviders.R |only tmap-4.1/tmap/R/tmapGridRun.R | 26 + tmap-4.1/tmap/R/tmapGridShape.R | 36 -- tmap-4.1/tmap/R/tmapGridSymbols.R | 2 tmap-4.1/tmap/R/tmapGridWrap.R | 63 ++- tmap-4.1/tmap/R/tmapLeafletAux.R | 10 tmap-4.1/tmap/R/tmapLeafletComp.R | 53 ++- tmap-4.1/tmap/R/tmapLeafletComp_funs.R | 66 +++ tmap-4.1/tmap/R/tmapLeafletComp_leg_portrait.R | 5 tmap-4.1/tmap/R/tmapLeafletProviders.R |only tmap-4.1/tmap/R/tmapLeafletRun.R | 10 tmap-4.1/tmap/R/tmapLeaflet_layers.R | 6 tmap-4.1/tmap/R/tmapOnLoad.R |only tmap-4.1/tmap/R/tmapScaleContinuous.R | 50 ++- tmap-4.1/tmap/R/tmapScaleDiscrete.R | 2 tmap-4.1/tmap/R/tmapScaleIntervals.R | 273 +++++++++++----- tmap-4.1/tmap/R/tmapScaleRGB.R | 2 tmap-4.1/tmap/R/tmapScaleRank.R | 194 +---------- tmap-4.1/tmap/R/tmapScale_.R | 6 tmap-4.1/tmap/R/tmapScale_defaults.R | 49 ++ tmap-4.1/tmap/R/tmapScale_misc.R | 2 tmap-4.1/tmap/R/tmapShape_misc.R | 8 tmap-4.1/tmap/R/tmapTrans.R | 5 tmap-4.1/tmap/R/tmap_animation.R | 128 ++++--- tmap-4.1/tmap/R/tmap_arrange.R | 3 tmap-4.1/tmap/R/tmap_icons.R | 30 + tmap-4.1/tmap/R/tmap_mode.R | 94 ++++- tmap-4.1/tmap/R/tmap_options.R | 114 +++--- tmap-4.1/tmap/R/tmap_options_defaults.R | 227 +++++++------ tmap-4.1/tmap/R/tmap_providers.R |only tmap-4.1/tmap/R/tmap_save.R | 51 +-- tmap-4.1/tmap/build/partial.rdb |binary tmap-4.1/tmap/man/figures/logo.png |binary tmap-4.1/tmap/man/qtm.Rd | 22 - tmap-4.1/tmap/man/tm_add_legend.Rd | 22 + tmap-4.1/tmap/man/tm_animate.Rd |only tmap-4.1/tmap/man/tm_basemap.Rd | 12 tmap-4.1/tmap/man/tm_chart.Rd | 44 -- tmap-4.1/tmap/man/tm_comp_group.Rd |only tmap-4.1/tmap/man/tm_compass.Rd | 18 - tmap-4.1/tmap/man/tm_credits.Rd | 18 - tmap-4.1/tmap/man/tm_crs.Rd | 2 tmap-4.1/tmap/man/tm_extra_innner_margin.Rd | 3 tmap-4.1/tmap/man/tm_facets.Rd | 13 tmap-4.1/tmap/man/tm_inset.Rd |only tmap-4.1/tmap/man/tm_layout.Rd | 316 ++++++++++--------- tmap-4.1/tmap/man/tm_legend.Rd | 21 - tmap-4.1/tmap/man/tm_logo.Rd | 24 - tmap-4.1/tmap/man/tm_minimap.Rd | 8 tmap-4.1/tmap/man/tm_mouse_coordinates.Rd | 8 tmap-4.1/tmap/man/tm_options.Rd | 310 ++++++++++-------- tmap-4.1/tmap/man/tm_plot.Rd | 4 tmap-4.1/tmap/man/tm_polygons.Rd | 8 tmap-4.1/tmap/man/tm_scale_bar.Rd | 15 tmap-4.1/tmap/man/tm_scale_intervals.Rd | 2 tmap-4.1/tmap/man/tm_scalebar.Rd | 25 + tmap-4.1/tmap/man/tm_seq.Rd | 2 tmap-4.1/tmap/man/tm_shape.Rd | 4 tmap-4.1/tmap/man/tm_title.Rd | 24 - tmap-4.1/tmap/man/tm_vars.Rd | 10 tmap-4.1/tmap/man/tmap_internal.Rd | 28 - tmap-4.1/tmap/man/tmap_mode.Rd | 12 tmap-4.1/tmap/man/tmap_options.Rd | 312 ++++++++++-------- tmap-4.1/tmap/man/tmap_providers.Rd |only 120 files changed, 3199 insertions(+), 2151 deletions(-)
Title: Educational Platform Trials Simulator
Description: Simulating multi-arm cluster-randomized, multi-site, and simple randomized trials. Includes functions for conducting multilevel analyses using both Bayesian and Frequentist methods. Supports futility and superiority analyses through Bayesian approaches, along with visualization tools to aid interpretation and presentation of results.
Author: Mohammad Sayari [aut, cre],
Akansha Singh [aut],
Germaine Uwimpuhwe [aut],
Jochen Einbeck [aut]
Maintainer: Mohammad Sayari <md.sayari13@gmail.com>
Diff between epts versions 1.1.4 dated 2025-05-01 and 1.2.1 dated 2025-05-12
DESCRIPTION | 8 - MD5 | 62 +++++------ NAMESPACE | 2 R/crt4armSimData.R | 4 R/crtAddIntervention.R | 241 ++++++++++++++++++++------------------------- R/crtDataSimulation.R | 104 +++++++++++++++---- R/futilityAnalysis.R | 35 +++++- R/mst4armSimData.R | 4 R/mstAddIntervention.R | 204 ++++++++++++++++---------------------- R/mstDataSimulation.R | 121 ++++++++++++++++------ R/multiArmAnalysis.R | 37 ++++-- R/plotPosteriorProbs.R | 23 +++- R/srt4armSimData.R | 4 R/srtAddIntervention.R | 121 +++++++++------------- R/srtDataSimulation.R | 137 ++++++++++++++++++------- R/superiorityAnalysis.R | 63 ++++++++--- data/crt4armSimData.rda |binary data/mst4armSimData.rda |binary data/srt4armSimData.rda |binary man/crt4armSimData.Rd | 4 man/crtAddIntervention.Rd | 14 +- man/crtDataSimulation.Rd | 43 +++++--- man/futilityAnalysis.Rd | 16 ++ man/mst4armSimData.Rd | 4 man/mstAddIntervention.Rd | 10 + man/mstDataSimulation.Rd | 43 +++++--- man/multiArmAnalysis.Rd | 19 ++- man/plotPosteriorProbs.Rd | 10 + man/srt4armSimData.Rd | 4 man/srtAddIntervention.Rd | 15 +- man/srtDataSimulation.Rd | 49 +++++---- man/superiorityAnalysis.Rd | 31 +++-- 32 files changed, 853 insertions(+), 579 deletions(-)
Title: Tools for Cleaning Rectangular Data
Description: A dependency-free collection of simple functions for cleaning
rectangular data. This package allows to detect, count and replace
values or discard rows/columns using a predicate function. In
addition, it provides tools to check conditions and return informative
error messages.
Author: Nicolas Frerebeau [aut, cre] ,
Brice Lebrun [art] ,
Universite Bordeaux Montaigne [fnd] ,
CNRS [fnd]
Maintainer: Nicolas Frerebeau <nicolas.frerebeau@u-bordeaux-montaigne.fr>
Diff between arkhe versions 1.10.0 dated 2025-02-25 and 1.11.0 dated 2025-05-12
DESCRIPTION | 19 +-- MD5 | 59 ++++++----- NAMESPACE | 3 NEWS.md | 8 + R/AllGenerics.R | 116 +++++++++++++++++++-- R/arkhe-package.R | 33 +----- R/clean.R | 19 +++ R/describe.R | 113 ++++++++++++--------- R/statistics.R | 153 ++++++++++++++++++++++++++--- README.md | 7 - inst/examples/ex-bootstrap.R |only inst/examples/ex-jackknife.R |only inst/examples/ex-resample.R | 20 --- inst/examples/ex-statistics.R | 1 inst/po/es |only inst/po/fr/LC_MESSAGES/R-arkhe.mo |binary inst/tinytest/_snaps/bootstrap_summary.rds |binary inst/tinytest/test_assert.R | 2 inst/tinytest/test_statistics.R | 37 +++++++ man/append_column.Rd | 4 man/arkhe-package.Rd | 35 +++--- man/bootstrap.Rd | 47 ++++++-- man/confidence_binomial.Rd | 4 man/confidence_bootstrap.Rd |only man/confidence_mean.Rd | 2 man/confidence_multinomial.Rd | 4 man/interval_credible.Rd | 1 man/interval_hdr.Rd | 1 man/jackknife.Rd | 16 --- man/resample_multinomial.Rd |only man/resample_uniform.Rd |only po/R-arkhe.pot | 64 ++++++------ po/R-es.po |only po/R-fr.po | 110 ++++++++++---------- 34 files changed, 599 insertions(+), 279 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-09-22 0.1.0
Title: Automated Selection and Visualisation of Statistical Hypothesis
Tests
Description: Automatically selects and visualises appropriate statistical
hypothesis tests between a response and a feature variable in a data frame.
The choice of test depends on the class, distribution, and sample size of the
input variables, as well as the user-defined 'conf.level'. Well suited for
web-based or server-side R applications.
Implemented tests: t.test(), wilcox.test(), aov(),
oneway.test(), kruskal.test(), lm(), fisher.test(), chisq.test().
Tests for normality: shapiro.test(), ad.test(). Tests for equal
variances: bartlett.test(). Post-hoc tests: TukeyHSD(),
pairwise.wilcox.test().
Author: Sabine Schilling [cre, aut, cph] ,
Peter Kauf [ctb]
Maintainer: Sabine Schilling <sabineschilling@gmx.ch>
Diff between visStatistics versions 0.1.1 dated 2021-02-12 and 0.1.2 dated 2025-05-12
visStatistics-0.1.1/visStatistics/R/detach_package.R |only visStatistics-0.1.2/visStatistics/DESCRIPTION | 57 visStatistics-0.1.2/visStatistics/MD5 | 83 visStatistics-0.1.2/visStatistics/NEWS.md |only visStatistics-0.1.2/visStatistics/R/counts_to_cases.R | 25 visStatistics-0.1.2/visStatistics/R/get_samples_fact_inputfile.R | 132 visStatistics-0.1.2/visStatistics/R/openGraphCairo.R | 115 visStatistics-0.1.2/visStatistics/R/saveGraphVisstat.R | 105 visStatistics-0.1.2/visStatistics/R/test_and_visuals.R | 1840 ++++------ visStatistics-0.1.2/visStatistics/R/vis_anova_assumptions.R |only visStatistics-0.1.2/visStatistics/R/visstat.R | 911 ++-- visStatistics-0.1.2/visStatistics/README.md | 245 + visStatistics-0.1.2/visStatistics/build |only visStatistics-0.1.2/visStatistics/inst |only visStatistics-0.1.2/visStatistics/man/counts_to_cases.Rd | 16 visStatistics-0.1.2/visStatistics/man/figures |only visStatistics-0.1.2/visStatistics/man/get_samples_fact_inputfile.Rd | 23 visStatistics-0.1.2/visStatistics/man/openGraphCairo.Rd | 30 visStatistics-0.1.2/visStatistics/man/saveGraphVisstat.Rd | 25 visStatistics-0.1.2/visStatistics/man/vis_anova_assumptions.Rd | 35 visStatistics-0.1.2/visStatistics/man/visstat.Rd | 235 - visStatistics-0.1.2/visStatistics/tests/examples/examples_openGraphCairo_saveGraphVisstat.R | 57 visStatistics-0.1.2/visStatistics/tests/examples/examples_visstat.R | 245 - visStatistics-0.1.2/visStatistics/tests/examples/examples_visstat_plots.R | 161 visStatistics-0.1.2/visStatistics/vignettes |only 25 files changed, 2411 insertions(+), 1929 deletions(-)
Title: Spatially and Temporally Varying Coefficient Models Using
Generalized Additive Models
Description: A framework for specifying spatially, temporally and spatially-and-temporally varying coefficient models using Generalized Additive Models with smooths. The smooths are parameterised with location, time and predictor variables. The framework supports the investigation of the presence and nature of any space-time dependencies in the data by evaluating multiple model forms (specifications) using a Generalized Cross-Validation score. The workflow sequence is to: i) Prepare the data by lengthening it to have a single location and time variables for each observation. ii) Evaluate all possible spatial and/or temporal models in which each predictor is specified in different ways. iii) Evaluate each model and pick the best one. iv) Create the final model. v) Calculate the varying coefficient estimates to quantify how the relationships between the target and predictor variables vary over space, time or space-time. vi) Create maps, time series plots etc. For more details see: Comber et al (2023) [...truncated...]
Author: Lex Comber [aut, cre],
Paul Harris [ctb],
Chris Brunsdon [ctb]
Maintainer: Lex Comber <a.comber@leeds.ac.uk>
Diff between stgam versions 0.0.1.2 dated 2024-07-31 and 1.0.0 dated 2025-05-12
stgam-0.0.1.2/stgam/R/calculate_vc.R |only stgam-0.0.1.2/stgam/R/do_bma.R |only stgam-0.0.1.2/stgam/R/gam_model_probs.R |only stgam-0.0.1.2/stgam/R/plot_1d_smooth.R |only stgam-0.0.1.2/stgam/R/plot_2d_smooth.R |only stgam-0.0.1.2/stgam/data/productivity.rda |only stgam-0.0.1.2/stgam/data/us_data.rda |only stgam-0.0.1.2/stgam/inst/doc/space-time-gam-intro.R |only stgam-0.0.1.2/stgam/inst/doc/space-time-gam-intro.Rmd |only stgam-0.0.1.2/stgam/inst/doc/space-time-gam-intro.html |only stgam-0.0.1.2/stgam/inst/doc/space-time-gam-model-probs-BMA.R |only stgam-0.0.1.2/stgam/inst/doc/space-time-gam-model-probs-BMA.Rmd |only stgam-0.0.1.2/stgam/inst/doc/space-time-gam-model-probs-BMA.html |only stgam-0.0.1.2/stgam/man/do_bma.Rd |only stgam-0.0.1.2/stgam/man/gam_model_probs.Rd |only stgam-0.0.1.2/stgam/man/plot_1d_smooth.Rd |only stgam-0.0.1.2/stgam/man/plot_2d_smooth.Rd |only stgam-0.0.1.2/stgam/man/productivity.Rd |only stgam-0.0.1.2/stgam/man/us_data.Rd |only stgam-0.0.1.2/stgam/vignettes/space-time-gam-intro.Rmd |only stgam-0.0.1.2/stgam/vignettes/space-time-gam-model-probs-BMA.Rmd |only stgam-1.0.0/stgam/DESCRIPTION | 19 stgam-1.0.0/stgam/MD5 | 59 +- stgam-1.0.0/stgam/NAMESPACE | 27 - stgam-1.0.0/stgam/NEWS.md | 10 stgam-1.0.0/stgam/R/calculate_vcs.R |only stgam-1.0.0/stgam/R/data.R | 57 +- stgam-1.0.0/stgam/R/evaluate_models.R | 226 +++++----- stgam-1.0.0/stgam/R/gam_model_rank.R |only stgam-1.0.0/stgam/R/stgam-package.R | 1 stgam-1.0.0/stgam/README.md | 91 ++-- stgam-1.0.0/stgam/build/partial.rdb |binary stgam-1.0.0/stgam/build/vignette.rds |binary stgam-1.0.0/stgam/data/hp_data.rda |only stgam-1.0.0/stgam/data/lb.rda |only stgam-1.0.0/stgam/inst/doc/space-time-gam-intro_rev.R |only stgam-1.0.0/stgam/inst/doc/space-time-gam-intro_rev.Rmd |only stgam-1.0.0/stgam/inst/doc/space-time-gam-intro_rev.html |only stgam-1.0.0/stgam/man/calculate_vcs.Rd | 41 - stgam-1.0.0/stgam/man/evaluate_models.Rd | 68 +-- stgam-1.0.0/stgam/man/gam_model_rank.Rd |only stgam-1.0.0/stgam/man/hp_data.Rd |only stgam-1.0.0/stgam/man/lb.Rd |only stgam-1.0.0/stgam/man/stgam-package.Rd | 2 stgam-1.0.0/stgam/vignettes/space-time-gam-intro_rev.Rmd |only stgam-1.0.0/stgam/vignettes/stvc_mods.RData |only stgam-1.0.0/stgam/vignettes/vignette.bib | 114 ++++- 47 files changed, 416 insertions(+), 299 deletions(-)
Title: Automatic Machine Learning with 'tidymodels'
Description: The goal of this package will be to provide a simple interface for automatic machine learning that fits the 'tidymodels' framework. The intention is to work for regression and classification problems with a simple verb framework.
Author: Steven Sanderson [aut, cre, cph]
Maintainer: Steven Sanderson <spsanderson@gmail.com>
Diff between tidyAML versions 0.0.5 dated 2024-03-12 and 0.0.6 dated 2025-05-12
DESCRIPTION | 14 - MD5 | 136 ++++++----- NAMESPACE | 3 NEWS.md | 13 + R/00_global_variables.R | 46 +-- R/as-workflow-sets.R | 190 ++++++++-------- R/extract-fitted-wflw.R | 138 +++++------ R/extract-mod-spec.R | 148 ++++++------ R/extract-regression-residuals.R | 208 ++++++++--------- R/extract-tunable-params.R |only R/extract-wflw-pred.R | 144 ++++++------ R/extract-wflw.R | 138 +++++------ R/internals-full-make-wflw.R | 204 ++++++++--------- R/internals-make-fitted-wflw.R | 216 +++++++++--------- R/internals-make-preds-wflw.R | 324 ++++++++++++++-------------- R/internals-make-spec-tbl.R | 168 +++++++------- R/internals-make-wflw-gee-lin-reg.R | 270 +++++++++++------------ R/internals-make-wflw.R | 196 ++++++++-------- R/internals-set-tune-modspec-args.R | 274 +++++++++++------------ R/make-classification-fast.R | 232 ++++++++++---------- R/make-model-spec.R | 218 +++++++++--------- R/make-regression-fast.R | 214 +++++++++--------- R/match-args.R | 100 ++++---- R/plot-regression-predictions.R | 254 ++++++++++----------- R/plot-regression-residuals.R | 220 +++++++++---------- R/pluck-model.R | 122 +++++----- R/utils-check-dupe-rows.R |only R/utils-class-to-parsnip.R | 148 ++++++------ R/utils-create-splits.R | 116 +++++----- R/utils-lib-loads.R | 260 +++++++++++----------- R/utils-make-base-tbl.R | 276 +++++++++++------------ R/utils-pipe.R | 28 +- R/utils-quantile-normalize.R |only R/utils-reg-to-parsnip.R | 148 ++++++------ R/utils-tidy-eval.R | 216 +++++++++--------- R/zzz.R | 38 +-- README.md | 186 ++++++++-------- build/vignette.rds |binary inst/doc/getting-started.R | 6 inst/doc/getting-started.Rmd | 270 +++++++++++------------ inst/doc/getting-started.html | 44 +-- man/check_duplicate_rows.Rd |only man/core_packages.Rd | 78 +++--- man/create_splits.Rd | 4 man/create_workflow_set.Rd | 132 +++++------ man/extract_model_spec.Rd | 97 ++++---- man/extract_regression_residuals.Rd | 107 ++++----- man/extract_tunable_params.Rd |only man/extract_wflw.Rd | 99 ++++---- man/extract_wflw_fit.Rd | 99 ++++---- man/extract_wflw_pred.Rd | 99 ++++---- man/fast_classification.Rd | 154 ++++++------- man/fast_classification_parsnip_spec_tbl.Rd | 108 ++++----- man/fast_regression_parsnip_spec_tbl.Rd | 4 man/full_internal_make_wflw.Rd | 124 +++++----- man/get_model.Rd | 103 ++++---- man/install_deps.Rd | 78 +++--- man/internal_make_fitted_wflw.Rd | 114 ++++----- man/internal_make_spec_tbl.Rd | 86 +++---- man/internal_make_wflw.Rd | 104 ++++---- man/internal_make_wflw_gee_lin_reg.Rd | 116 +++++----- man/internal_make_wflw_predictions.Rd | 140 ++++++------ man/internal_set_args_to_tune.Rd | 98 ++++---- man/load_deps.Rd | 82 +++---- man/make_classification_base_tbl.Rd | 70 +++--- man/make_regression_base_tbl.Rd | 70 +++--- man/match_args.Rd | 106 ++++----- man/pipe.Rd | 30 +- man/plot_regression_predictions.Rd | 102 ++++---- man/plot_regression_residuals.Rd | 92 +++---- man/quantile_normalize.Rd |only vignettes/getting-started.Rmd | 270 +++++++++++------------ 72 files changed, 4369 insertions(+), 4323 deletions(-)
Title: Wrapper Functions for 'Freesurfer'
Description: Wrapper functions that interface with 'Freesurfer'
<https://surfer.nmr.mgh.harvard.edu/>, a powerful and
commonly-used 'neuroimaging'
software, using system commands. The goal is to be able to interface with
'Freesurfer' completely in R, where you pass R objects of class 'nifti',
implemented by package 'oro.nifti', and the function executes an 'Freesurfer'
command and returns an R object of class 'nifti' or necessary output.
Author: John Muschelli [aut, cre] ,
Athanasia Mo Mowinckel [ctb]
Maintainer: John Muschelli <muschellij2@gmail.com>
Diff between freesurfer versions 1.6.10 dated 2024-05-14 and 1.8.1 dated 2025-05-12
DESCRIPTION | 14 ++-- MD5 | 91 +++++++++++++------------- NAMESPACE | 3 NEWS.md | 35 +++++----- R/aparcstats2table.R | 116 ++++++++++++++++++---------------- R/checkmnc.R | 2 R/fs_cmd.R | 39 +++++------ R/mnc2nii.R | 31 ++++----- R/mri_convert.R | 28 ++++---- R/mri_deface.R | 33 +++++---- R/mri_info.R | 24 ++----- R/mri_surf2surf.R | 95 +++++++++++++-------------- R/mri_synthstrip.R |only R/mri_watershed.R | 31 ++++----- R/mris_convert.R | 49 ++++++-------- R/mris_euler_number.R | 32 ++++----- R/nii2mnc.R | 31 +++++---- R/nu_correct.R | 31 ++++----- R/read_aseg_stats.R | 8 +- R/read_fs_table.R | 2 R/readmgz.R | 22 ++---- R/readmnc.R | 11 +-- R/run_check_fs_cmd.R | 15 ++-- R/surf_convert.R | 20 +++-- build/vignette.rds |binary inst/doc/exploring_included_data.R | 112 ++++++++++++++++---------------- inst/doc/exploring_included_data.html | 19 ++--- man/aparcstats2table.Rd | 13 ++- man/checkmnc-methods.Rd | 2 man/fs_cmd.Rd | 6 - man/mnc2nii.Rd | 8 +- man/mri_convert.Rd | 8 +- man/mri_deface.Rd | 4 - man/mri_info.Rd | 4 - man/mri_surf2surf.Rd | 19 +++-- man/mri_synthstrip.Rd |only man/mri_synthstrip.help.Rd |only man/mri_watershed.Rd | 6 - man/mris_convert.Rd | 17 +++- man/mris_euler_number.Rd | 10 +- man/nii2mnc.Rd | 8 +- man/nu_correct.Rd | 6 - man/read_aseg_stats.Rd | 5 + man/read_fs_table.Rd | 2 man/readmgz.Rd | 12 ++- man/readmnc.Rd | 6 - man/run_check_fs_cmd.Rd | 4 - man/surf_convert.Rd | 4 - 48 files changed, 552 insertions(+), 486 deletions(-)
Title: High Performance Tables Using 'Cheetah Grid'
Description: An R interface to 'Cheetah Grid', a high-performance JavaScript table widget.
'cheetahR' allows users to render millions of rows in just a few milliseconds,
making it an excellent alternative to other R table widgets. The package wraps
the 'Cheetah Grid' JavaScript functions and makes them readily available for R users.
The underlying grid implementation is based on 'Cheetah Grid'
<https://github.com/future-architect/cheetah-grid>.
Author: Olajoke Oladipo [aut, cre],
David Granjon [aut],
cynkra GmbH [fnd]
Maintainer: Olajoke Oladipo <olajoke@cynkra.com>
Diff between cheetahR versions 0.1.0 dated 2025-04-18 and 0.2.0 dated 2025-05-12
DESCRIPTION | 9 MD5 | 41 NAMESPACE | 3 NEWS.md |only R/add_cell_message.R |only R/cheetah.R | 24 R/cheetah_utils.R | 143 R/js_ifelse.R |only R/utils.R | 58 inst/doc/cheetahR.R | 352 inst/doc/cheetahR.html |32704 +++++++++++++++++++++++++++- inst/doc/cheetahR.qmd | 441 inst/htmlwidgets/cheetah.js |32193 +++++++++++++++++++++++++++ man/add_cell_message.Rd |only man/cheetah.Rd | 13 man/column_def.Rd | 76 man/column_group.Rd |only man/js_ifelse.Rd |only tests/testthat/_snaps |only tests/testthat/test-cheetah.R | 4 tests/testthat/test-js_ifelse.R |only tests/testthat/test-test-add_cell_message.R |only tests/testthat/test-utils.R | 54 vignettes/cheetahR.qmd | 441 vignettes/figures |only 25 files changed, 66495 insertions(+), 61 deletions(-)
Title: Spatial Data Science Complementary Features
Description: Wrapping and supplementing commonly used functions in the R ecosystem related to spatial data science,
while serving as a basis for other packages maintained by Wenbo Lv.
Author: Wenbo Lv [aut, cre, cph]
Maintainer: Wenbo Lv <lyu.geosocial@gmail.com>
Diff between sdsfun versions 0.7.0 dated 2025-01-13 and 0.8.0 dated 2025-05-12
DESCRIPTION | 13 ++-- MD5 | 64 ++++++++++++---------- NAMESPACE | 1 NEWS.md | 6 ++ R/RcppExports.R | 28 +++++++++ R/cor_test.R |only R/moran_test.R | 15 ----- R/ssh_test.R | 6 -- R/stratification.R | 12 ++-- R/vector_toolkits.R | 130 +++++++++++++++++++++++----------------------- README.md | 17 ++++-- man/cor_test.Rd |only man/discretize_vector.Rd | 4 + man/moran_test.Rd | 16 +---- man/ssh_test.Rd | 7 -- src/Correlation.cpp |only src/Correlation.h |only src/CorrelationExp.cpp |only src/Disc.cpp | 61 ++++++++++++++++++++- src/DummyVar.cpp | 9 +-- src/DummyVar.h | 3 - src/Entropy.cpp |only src/Entropy.h |only src/ExtropyExp.cpp |only src/GeoDetector.cpp | 26 +++++---- src/GlobalMoranI_Test.cpp | 2 src/HClustGeo.cpp | 6 -- src/JenksBreaks.cpp | 11 ++- src/JenksBreaks.h | 7 ++ src/PrintSPtest.cpp | 4 + src/RcppExports.cpp | 107 +++++++++++++++++++++++++++++++++++++ src/SDSUtils.cpp | 5 + src/SDSUtils.h | 4 + src/SPADE_PSD.cpp | 6 +- src/SpatialVariance.cpp | 7 +- src/SpatialVariance.h | 3 - src/Tbl2Mat.cpp | 5 + 37 files changed, 399 insertions(+), 186 deletions(-)
Title: Matrix Completion via Iterative Soft-Thresholded SVD
Description: Iterative methods for matrix completion that use nuclear-norm regularization. There are two main approaches.The one approach uses iterative soft-thresholded svds to impute the missing values. The second approach uses alternating least squares. Both have an 'EM' flavor, in that at each iteration the matrix is completed with the current estimate. For large matrices there is a special sparse-matrix class named "Incomplete" that efficiently handles all computations. The package includes procedures for centering and scaling rows, columns or both, and for computing low-rank SVDs on large sparse centered matrices (i.e. principal components).
Author: Trevor Hastie [aut, cre],
Rahul Mazumder [aut],
Balasubramanian Narasimhan [ctb]
Maintainer: Trevor Hastie <hastie@stanford.edu>
Diff between softImpute versions 1.4-2 dated 2025-05-06 and 1.4-3 dated 2025-05-12
DESCRIPTION | 8 ++++---- MD5 | 26 ++++++++++++++------------ R/Ssimpute.svd.R | 6 +++--- R/biScale.R | 11 +++++++---- R/simpute.svd.R | 4 ++-- R/softImpute-package.R | 5 +++-- R/softImpute.R | 10 ++++++---- inst/CITATION |only inst/bibtex |only inst/doc/softImpute.html | 2 +- man/Ssimpute.svd.Rd | 2 +- man/biScale.Rd | 5 +++++ man/simpute.svd.Rd | 2 +- man/softImpute-package.Rd | 4 +++- man/softImpute.Rd | 4 +++- 15 files changed, 53 insertions(+), 36 deletions(-)
Title: A Method to Download Department of Education College Scorecard
Data
Description: A method to download Department of Education College
Scorecard data using the public API
<https://collegescorecard.ed.gov/data/data-documentation/>. It is based on
the 'dplyr' model of piped commands to select and filter data in a
single chained function call. An API key from the U.S. Department of
Education is required.
Author: Benjamin Skinner [aut, cre]
Maintainer: Benjamin Skinner <ben@btskinner.io>
Diff between rscorecard versions 0.31.0 dated 2025-04-09 and 0.32.0 dated 2025-05-12
DESCRIPTION | 9 +++++---- MD5 | 6 +++--- NEWS.md | 4 ++++ R/sysdata.rda |binary 4 files changed, 12 insertions(+), 7 deletions(-)
Title: Report Functions to Create HTML and PDF Files
Description: Create and combine HTML and PDF reports from within R.
Possibility to design tables and listings for reporting and also include R plots.
Author: Richard Hooijmaijers [aut, cre],
Richard Hooijmaijers [cph]
Maintainer: Richard Hooijmaijers <richardhooijmaijers@gmail.com>
Diff between R3port versions 0.2.5 dated 2023-09-22 and 0.3.0 dated 2025-05-12
R3port-0.2.5/R3port/tests/testthat.r |only R3port-0.2.5/R3port/tests/testthat/test.doc.r |only R3port-0.2.5/R3port/tests/testthat/test.freq.r |only R3port-0.2.5/R3port/tests/testthat/test.means.r |only R3port-0.3.0/R3port/DESCRIPTION | 10 R3port-0.3.0/R3port/MD5 | 155 +- R3port-0.3.0/R3port/NAMESPACE | 42 R3port-0.3.0/R3port/NEWS.md | 55 R3port-0.3.0/R3port/R/R3port-package.r | 14 R3port-0.3.0/R3port/R/html_combine.r | 2 R3port-0.3.0/R3port/R/html_doc.r | 4 R3port-0.3.0/R3port/R/html_list.r | 8 R3port-0.3.0/R3port/R/html_plot.r | 4 R3port-0.3.0/R3port/R/html_table.r | 4 R3port-0.3.0/R3port/R/html_table_design.r | 2 R3port-0.3.0/R3port/R/ltx_combine.r | 2 R3port-0.3.0/R3port/R/ltx_doc.r | 6 R3port-0.3.0/R3port/R/ltx_list.r | 12 R3port-0.3.0/R3port/R/ltx_plot.r | 255 ++-- R3port-0.3.0/R3port/R/ltx_table.r | 9 R3port-0.3.0/R3port/R/ltx_table_design.r | 4 R3port-0.3.0/R3port/README.md | 30 R3port-0.3.0/R3port/build/vignette.rds |binary R3port-0.3.0/R3port/inst/doc/R3port-vignette.R | 208 +-- R3port-0.3.0/R3port/inst/doc/R3port-vignette.Rmd | 474 +++---- R3port-0.3.0/R3port/inst/doc/R3port-vignette.html | 1340 +++++++++++----------- R3port-0.3.0/R3port/man/R3port.Rd | 84 - R3port-0.3.0/R3port/man/figures |only R3port-0.3.0/R3port/man/freq.Rd | 112 - R3port-0.3.0/R3port/man/html_combine.Rd | 114 - R3port-0.3.0/R3port/man/html_doc.Rd | 110 - R3port-0.3.0/R3port/man/html_list.Rd | 162 +- R3port-0.3.0/R3port/man/html_plot.Rd | 152 +- R3port-0.3.0/R3port/man/html_table.Rd | 192 +-- R3port-0.3.0/R3port/man/html_table_design.Rd | 112 - R3port-0.3.0/R3port/man/ltx_combine.Rd | 106 - R3port-0.3.0/R3port/man/ltx_doc.Rd | 122 +- R3port-0.3.0/R3port/man/ltx_list.Rd | 198 +-- R3port-0.3.0/R3port/man/ltx_plot.Rd | 211 +-- R3port-0.3.0/R3port/man/ltx_table.Rd | 224 +-- R3port-0.3.0/R3port/man/ltx_table_design.Rd | 148 +- R3port-0.3.0/R3port/man/means.Rd | 96 - R3port-0.3.0/R3port/man/table_prep.Rd | 82 - R3port-0.3.0/R3port/tests/testthat.R |only R3port-0.3.0/R3port/tests/testthat/test_freq.R |only R3port-0.3.0/R3port/tests/testthat/test_htmlfun.R |only R3port-0.3.0/R3port/tests/testthat/test_ltxfun.R |only R3port-0.3.0/R3port/tests/testthat/test_means.R |only R3port-0.3.0/R3port/vignettes/R3port-vignette.Rmd | 474 +++---- R3port-0.3.0/R3port/vignettes/comb1.html | 392 +++--- R3port-0.3.0/R3port/vignettes/comb1.tex | 542 ++++---- R3port-0.3.0/R3port/vignettes/combt1.tex | 536 ++++---- R3port-0.3.0/R3port/vignettes/combt2.tex | 542 ++++---- R3port-0.3.0/R3port/vignettes/combt3.tex | 540 ++++---- R3port-0.3.0/R3port/vignettes/combt4.tex | 528 ++++---- R3port-0.3.0/R3port/vignettes/combt5.tex | 526 ++++---- R3port-0.3.0/R3port/vignettes/out1.html | 76 - R3port-0.3.0/R3port/vignettes/out1.tex | 102 - R3port-0.3.0/R3port/vignettes/out2.html | 192 +-- R3port-0.3.0/R3port/vignettes/out2.html.rawhtml | 176 +- R3port-0.3.0/R3port/vignettes/out2.tex | 230 +-- R3port-0.3.0/R3port/vignettes/out2.tex.rawtex | 200 +-- R3port-0.3.0/R3port/vignettes/out3.html | 114 - R3port-0.3.0/R3port/vignettes/out3.html.rawhtml | 98 - R3port-0.3.0/R3port/vignettes/out3.tex | 114 - R3port-0.3.0/R3port/vignettes/out3.tex.rawtex | 84 - R3port-0.3.0/R3port/vignettes/out4.tex | 98 - R3port-0.3.0/R3port/vignettes/out4.tex.rawtex | 66 - R3port-0.3.0/R3port/vignettes/out5.tex | 104 - R3port-0.3.0/R3port/vignettes/out5.tex.rawtex | 72 - R3port-0.3.0/R3port/vignettes/out6.html | 24 R3port-0.3.0/R3port/vignettes/out6.html.rawhtml | 8 R3port-0.3.0/R3port/vignettes/out6.tex | 46 R3port-0.3.0/R3port/vignettes/out6.tex.rawtex | 16 R3port-0.3.0/R3port/vignettes/out7.html | 26 R3port-0.3.0/R3port/vignettes/out7.html.rawhtml | 10 R3port-0.3.0/R3port/vignettes/out7.tex | 58 R3port-0.3.0/R3port/vignettes/out7.tex.rawtex | 28 R3port-0.3.0/R3port/vignettes/out8.html | 24 R3port-0.3.0/R3port/vignettes/out8.html.rawhtml | 8 R3port-0.3.0/R3port/vignettes/out8.tex | 46 R3port-0.3.0/R3port/vignettes/out8.tex.rawtex | 16 82 files changed, 5499 insertions(+), 5482 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-10-16 0.1.0
Title: Datasets for the R/qtl Book
Description: Datasets for the book, A Guide to QTL Mapping with R/qtl.
Broman and Sen (2009) <doi:10.1007/978-0-387-92125-9>.
Author: Karl W Broman [aut, cre]
Maintainer: Karl W Broman <broman@wisc.edu>
Diff between qtlbook versions 0.18-8 dated 2019-06-28 and 0.20 dated 2025-05-12
qtlbook-0.18-8/qtlbook/Changelog |only qtlbook-0.20/qtlbook/DESCRIPTION | 16 ++++++---- qtlbook-0.20/qtlbook/MD5 | 44 +++++++++++++++--------------- qtlbook-0.20/qtlbook/NEWS.md |only qtlbook-0.20/qtlbook/README.md | 7 ++-- qtlbook-0.20/qtlbook/data/ch3a.RData |binary qtlbook-0.20/qtlbook/data/ch3b.RData |binary qtlbook-0.20/qtlbook/data/ch3c.RData |binary qtlbook-0.20/qtlbook/data/gutlength.RData |binary qtlbook-0.20/qtlbook/data/iron.RData |binary qtlbook-0.20/qtlbook/data/myocard.RData |binary qtlbook-0.20/qtlbook/data/nf1.RData |binary qtlbook-0.20/qtlbook/data/ovar.RData |binary qtlbook-0.20/qtlbook/data/trout.RData |binary qtlbook-0.20/qtlbook/inst/CITATION | 6 ++-- qtlbook-0.20/qtlbook/man/ch3a.Rd | 6 ++-- qtlbook-0.20/qtlbook/man/ch3b.Rd | 6 ++-- qtlbook-0.20/qtlbook/man/ch3c.Rd | 6 ++-- qtlbook-0.20/qtlbook/man/gutlength.Rd | 8 +++-- qtlbook-0.20/qtlbook/man/iron.Rd | 6 ++-- qtlbook-0.20/qtlbook/man/myocard.Rd | 6 ++-- qtlbook-0.20/qtlbook/man/nf1.Rd | 6 ++-- qtlbook-0.20/qtlbook/man/ovar.Rd | 6 ++-- qtlbook-0.20/qtlbook/man/trout.Rd | 6 ++-- 24 files changed, 75 insertions(+), 54 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-03-13 1.0
Title: Analyze and Visualize Data from 'Microsoft Viva Insights'
Description: Provides a versatile range of functions, including exploratory data analysis, time-series analysis, organizational network analysis, and data validation, whilst at the same time implements a set of best practices in analyzing and visualizing data specific to 'Microsoft Viva Insights'.
Author: Martin Chan [aut, cre],
Carlos Morales [aut]
Maintainer: Martin Chan <martin.chan@microsoft.com>
Diff between vivainsights versions 0.6.0 dated 2025-02-20 and 0.6.1 dated 2025-05-12
DESCRIPTION | 8 - MD5 | 22 ++-- NAMESPACE | 2 NEWS.md | 155 +++++++++++++++--------------- R/create_itsa.R |only R/globals.R | 9 + R/identify_habit.R | 7 + R/identify_usage_segments.R |only README.md | 24 +++- man/create_itsa.Rd |only man/identify_habit.Rd | 194 +++++++++++++++++++------------------- man/identify_usage_segments.Rd |only man/plot_ts_us.Rd |only man/prep_query.Rd | 108 ++++++++++----------- tests/testthat/test_create_itsa.R |only 15 files changed, 287 insertions(+), 242 deletions(-)
Title: Maxwell Control Charts
Description: Computes Control limits, coefficients of control limits, various performance metrics and depicts control charts for monitoring Maxwell-distributed quality characteristics.
Author: Zahid Khan [aut],
Zsolt T. Kosztyan [aut, cre]
Maintainer: Zsolt T. Kosztyan <kosztyan.zsolt@gtk.uni-pannon.hu>
Diff between mxcc versions 0.0.1 dated 2024-10-29 and 0.0.2 dated 2025-05-12
DESCRIPTION | 6 +++--- MD5 | 34 ++++++++++++++++++++-------------- NAMESPACE | 11 +++++++++++ R/mxarl.R | 39 ++++++++++++++++++--------------------- R/mxk.R | 7 +++++-- R/mxm.R | 4 ++-- R/mxpw.R | 27 +++++++++++++-------------- R/mxrpc.R | 29 ++++++----------------------- R/mxspc.R | 34 ++++------------------------------ R/plot.R |only R/print.R |only R/summary.R |only man/mxarl.Rd | 6 +++--- man/mxk.Rd | 6 ++++-- man/mxm.Rd | 8 ++++---- man/mxpw.Rd | 4 ++-- man/mxrpc.Rd | 30 ++++++++++++++++++++++-------- man/mxspc.Rd | 30 +++++++++++++++++------------- man/plot.Rd |only man/print.Rd |only man/summary.Rd |only 21 files changed, 134 insertions(+), 141 deletions(-)
Title: Kinship Analysis with Linked Markers
Description: A 'shiny' application for forensic kinship testing, based on
the 'pedsuite' R packages. 'KLINK' is closely aligned with the (non-R)
software 'Familias' and 'FamLink', but offers several unique features,
including visualisations and automated report generation. The
calculation of likelihood ratios supports pairs of linked markers, and
all common mutation models.
Author: Magnus Dehli Vigeland [aut, cre]
Maintainer: Magnus Dehli Vigeland <m.d.vigeland@medisin.uio.no>
Diff between KLINK versions 1.0.2 dated 2024-09-03 and 1.1.0 dated 2025-05-12
KLINK-1.0.2/KLINK/R/lumping.R |only KLINK-1.1.0/KLINK/DESCRIPTION | 20 - KLINK-1.1.0/KLINK/MD5 | 71 +++-- KLINK-1.1.0/KLINK/NAMESPACE | 15 - KLINK-1.1.0/KLINK/NEWS.md | 50 +++- KLINK-1.1.0/KLINK/R/KLINK-package.R | 16 - KLINK-1.1.0/KLINK/R/addTotals.R |only KLINK-1.1.0/KLINK/R/data.R | 51 +++- KLINK-1.1.0/KLINK/R/getLinkedPairs.R | 19 - KLINK-1.1.0/KLINK/R/karyo.R | 7 KLINK-1.1.0/KLINK/R/launchApp.R | 8 KLINK-1.1.0/KLINK/R/linkedLR.R | 225 +++++++++++------- KLINK-1.1.0/KLINK/R/loadFamFile.R | 91 +++++-- KLINK-1.1.0/KLINK/R/loadMap.R |only KLINK-1.1.0/KLINK/R/markerSummary.R | 40 +-- KLINK-1.1.0/KLINK/R/parseXML.R | 4 KLINK-1.1.0/KLINK/R/prettyTable.R | 241 ++++++++++--------- KLINK-1.1.0/KLINK/R/tooltips.R |only KLINK-1.1.0/KLINK/R/utils.R | 49 +++ KLINK-1.1.0/KLINK/R/writeMasked.R | 10 KLINK-1.1.0/KLINK/R/writeResult.R | 149 ++++++----- KLINK-1.1.0/KLINK/R/zzz.R | 3 KLINK-1.1.0/KLINK/data/LINKAGEMAP.rda |binary KLINK-1.1.0/KLINK/data/halfsib.rda |only KLINK-1.1.0/KLINK/data/paternity.rda |binary KLINK-1.1.0/KLINK/data/sibship.rda |only KLINK-1.1.0/KLINK/inst/extdata/halfsib.fam |only KLINK-1.1.0/KLINK/inst/extdata/sibship.fam |only KLINK-1.1.0/KLINK/inst/shiny/R |only KLINK-1.1.0/KLINK/inst/shiny/app.R | 350 ++++++++++++++++++---------- KLINK-1.1.0/KLINK/inst/shiny/www/custom.css | 6 KLINK-1.1.0/KLINK/man/LINKAGEMAP.Rd | 4 KLINK-1.1.0/KLINK/man/getLinkedPairs.Rd | 10 KLINK-1.1.0/KLINK/man/getTotals.Rd |only KLINK-1.1.0/KLINK/man/halfsib.Rd |only KLINK-1.1.0/KLINK/man/linkedLR.Rd | 37 +- KLINK-1.1.0/KLINK/man/loadFamFile.Rd | 6 KLINK-1.1.0/KLINK/man/loadMap.Rd |only KLINK-1.1.0/KLINK/man/map50.Rd |only KLINK-1.1.0/KLINK/man/parseXML.Rd | 6 KLINK-1.1.0/KLINK/man/paternity.Rd | 6 KLINK-1.1.0/KLINK/man/sibship.Rd |only KLINK-1.1.0/KLINK/man/writeResult.Rd | 7 43 files changed, 977 insertions(+), 524 deletions(-)
Title: Probabilities for Pedigrees Given DNA Data
Description: An interface to the core 'Familias' functions which are
programmed in C++. The implementation is described in Egeland, Mostad and Olaisen
(1997) <doi:10.1016/S1355-0306(97)72202-0> and Simonsson and Mostad
(2016) <doi:10.1016/j.fsigen.2016.04.005>.
Author: Petter Mostad [aut],
Thore Egeland [aut, cre],
Ivar Simonsson [aut]
Maintainer: Thore Egeland <Thore.Egeland@nmbu.no>
Diff between Familias versions 2.6.2 dated 2025-01-08 and 2.6.3 dated 2025-05-12
DESCRIPTION | 6 +++--- MD5 | 5 +++-- NEWS.md |only src/FamInterface.cpp | 6 +++--- 4 files changed, 9 insertions(+), 8 deletions(-)
Title: Extension of `data.frame`
Description: Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and fast character-separated-value read/write. Offers a natural and flexible syntax, for faster development.
Author: Tyson Barrett [aut, cre] ,
Matt Dowle [aut],
Arun Srinivasan [aut],
Jan Gorecki [aut],
Michael Chirico [aut] ,
Toby Hocking [aut] ,
Benjamin Schwendinger [aut] ,
Ivan Krylov [aut] ,
Pasha Stetsenko [ctb],
Tom Short [ctb],
Steve Lianoglou [ctb],
Eduar [...truncated...]
Maintainer: Tyson Barrett <t.barrett88@gmail.com>
Diff between data.table versions 1.17.0 dated 2025-02-22 and 1.17.2 dated 2025-05-12
DESCRIPTION | 18 MD5 | 66 - NEWS.md | 27 R/AllS4.R | 3 R/as.data.table.R | 16 R/fwrite.R | 9 build/vignette.rds |binary inst/cc | 2 inst/doc/datatable-benchmarking.html | 230 ++---- inst/doc/datatable-faq.html | 431 +++++------- inst/doc/datatable-importing.html | 232 ++---- inst/doc/datatable-intro.html | 280 +++---- inst/doc/datatable-joins.html | 240 ++---- inst/doc/datatable-keys-fast-subset.html | 266 +++---- inst/doc/datatable-programming.html | 229 ++---- inst/doc/datatable-reference-semantics.html | 234 ++---- inst/doc/datatable-reshape.html | 228 ++---- inst/doc/datatable-sd-usage.html | 234 ++---- inst/doc/datatable-secondary-indices-and-auto-indexing.html | 258 +++---- inst/tests/S4.Rraw.bz2 |binary inst/tests/tests.Rraw.bz2 |binary man/as.data.table.Rd | 2 man/fread.Rd | 2 man/fwrite.Rd | 2 src/assign.c | 4 src/data.table.h | 11 src/dogroups.c | 2 src/forder.c | 4 src/fread.c | 20 src/freadR.c | 2 src/fwrite.c | 41 - src/init.c | 4 src/rbindlist.c | 2 src/subset.c | 2 34 files changed, 1423 insertions(+), 1678 deletions(-)
Title: Comprehensive Science Mapping Analysis
Description: Tool for quantitative research in scientometrics and bibliometrics.
It implements the comprehensive workflow for science mapping analysis proposed in Aria M. and
Cuccurullo C. (2017) <doi:10.1016/j.joi.2017.08.007>.
'bibliometrix' provides various routines for importing bibliographic data from 'SCOPUS',
'Clarivate Analytics Web of Science' (<https://www.webofknowledge.com/>), 'Digital Science Dimensions'
(<https://www.dimensions.ai/>), 'OpenAlex' (<https://openalex.org/>), 'Cochrane Library' (<https://www.cochranelibrary.com/>), 'Lens' (<https://lens.org>),
and 'PubMed' (<https://pubmed.ncbi.nlm.nih.gov/>) databases, performing bibliometric analysis
and building networks for co-citation, coupling, scientific collaboration and co-word analysis.
Author: Massimo Aria [cre, aut, cph] ,
Corrado Cuccurullo [aut]
Maintainer: Massimo Aria <aria@unina.it>
Diff between bibliometrix versions 4.3.3 dated 2025-03-18 and 4.3.5 dated 2025-05-12
DESCRIPTION | 12 MD5 | 239 NEWS | 4 R/Hindex.R | 126 R/apiOA2df.R | 226 R/authorProdOverTime.R | 165 R/bib2df.R | 303 - R/biblioAnalysis.R | 397 - R/biblioNetwork.R | 145 R/biblioshiny.R | 32 R/bibtag.R | 6 R/bradford.R | 104 R/citations.R | 157 R/cocMatrix.R | 233 R/cochrane2df.R | 97 R/collabByRegionPlot.R | 119 R/conceptualStructure.R | 932 +-- R/convert2df.R | 284 - R/countries.R | 8 R/couplingMap.R | 585 +- R/csvLens2df.R | 115 R/csvOA2df.R | 162 R/csvScopus2df.R | 162 R/customTheme.R | 6 R/dimensions2df.R | 298 - R/dominance.R | 63 R/duplicatedMatching.R | 78 R/fieldByYear.R | 158 R/histNetwork.R | 489 - R/histPlot.R | 429 - R/idByAuthor.R | 70 R/importFiles.R | 17 R/isi2df.R | 121 R/isibib2df.R | 7 R/keywordAssoc.R | 52 R/keywordGrowth.R | 107 R/localCitations.R | 62 R/lotka.R | 95 R/mergeDbSources.R | 107 R/metaTagExtraction.R | 749 +- R/missingData.R | 73 R/net2Pajek.R | 93 R/net2VOSviewer.R | 54 R/networkPlot.R | 495 - R/networkStat.R | 295 - R/normalizeCItationScore.R | 178 R/normalizeSimilarity.R | 89 R/plot.bibliodendrogram.R | 9 R/plot.bibliometrix.R | 453 - R/plotThematicEvolution.R | 157 R/pubmed2df.R | 108 R/readFiles.R | 12 R/removeStrangeChar.R | 17 R/retrievalByAuthorID.R | 225 R/rpys.R | 332 - R/scopus2df.R | 8 R/sourceGrowth.R | 67 R/splitCommunities.R | 71 R/stopwords.R | 10 R/summary.bibliometrix.R | 415 - R/summary.bibliometrix_netstat.R | 271 R/tableTag.R | 58 R/termExtraction.R | 287 - R/thematicEvolution.R | 261 R/thematicMap.R | 14 R/threeFieldsPlot.R | 253 R/timeslice.R | 46 R/toUpper.R | 4 R/trim.R | 6 R/trim.leading.R | 7 R/trimES.R | 6 R/zzz.R | 350 - build/partial.rdb |binary inst/biblioshiny/libraries.R | 147 inst/biblioshiny/server.R | 141 inst/biblioshiny/ui.R | 9896 +++++++++++++++++++++--------------- inst/biblioshiny/utils.R | 4243 ++++++++------- inst/biblioshiny/www/tall_logo.jpg |only man/Hindex.Rd | 6 man/KeywordGrowth.Rd | 6 man/authorProdOverTime.Rd | 2 man/biblioNetwork.Rd | 16 man/biblioshiny.Rd | 13 man/bradford.Rd | 7 man/citations.Rd | 2 man/cocMatrix.Rd | 4 man/collabByRegionPlot.Rd | 23 man/conceptualStructure.Rd | 22 man/convert2df.Rd | 13 man/countries.Rd | 2 man/couplingMap.Rd | 25 man/dominance.Rd | 2 man/duplicatedMatching.Rd | 17 man/fieldByYear.Rd | 8 man/histNetwork.Rd | 1 man/histPlot.Rd | 4 man/keywordAssoc.Rd | 2 man/localCitations.Rd | 6 man/lotka.Rd | 13 man/mergeDbSources.Rd | 5 man/metaTagExtraction.Rd | 8 man/missingData.Rd | 8 man/net2Pajek.Rd | 10 man/net2VOSviewer.Rd | 6 man/networkPlot.Rd | 18 man/networkStat.Rd | 4 man/normalizeCitationScore.Rd | 7 man/normalizeSimilarity.Rd | 28 man/plot.bibliometrix.Rd | 2 man/plotThematicEvolution.Rd | 10 man/readFiles.Rd | 2 man/retrievalByAuthorID.Rd | 12 man/rpys.Rd | 10 man/sourceGrowth.Rd | 7 man/splitCommunities.Rd | 12 man/stopwords.Rd | 2 man/summary.bibliometrix_netstat.Rd | 8 man/termExtraction.Rd | 29 man/thematicEvolution.Rd | 11 man/threeFieldsPlot.Rd | 8 man/timeslice.Rd | 2 121 files changed, 14957 insertions(+), 12118 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-02-22 0.3.3
2023-06-23 0.3.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-03-18 0.1.2
2024-02-26 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-01-13 0.1.6.2
2024-12-18 0.1.6.1
2024-12-14 0.1.6
2024-11-11 0.1.5
2024-07-02 0.1.4.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-03-27 0.3.1
2022-03-25 0.3.0
2021-10-15 0.2.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-05-21 1.0.8
2018-01-23 1.0.7
2017-08-20 1.0.5
2017-08-09 1.0.2
2017-08-08 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-04-12 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-10-15 3.0-2
2018-05-24 2.0.0
2018-02-17 1.3.5
2017-08-10 1.3.4
2017-08-09 1.3.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-02-07 2.6.2
2021-04-07 2.6.1
2020-04-12 2.6.0
2020-03-28 2.5.0
2020-03-26 2.4.0
Title: Graphical Visualizations for Multi-Objective Optimization
Description: Visualization of multi-dimensional data arising in multi-objective optimization, including plots of the empirical attainment function (EAF), M. López-Ibáñez, L. Paquete, and T. Stützle (2010) <doi:10.1007/978-3-642-02538-9_9>, and symmetric Vorob'ev expectation and deviation, M. Binois, D. Ginsbourger, O. Roustant (2015) <doi:10.1016/j.ejor.2014.07.032>, among others.
Author: Manuel Lopez-Ibanez [aut, cre] ,
Carlos Fonseca [ctb],
Luis Paquete [ctb],
Mickael Binois [ctb]
Maintainer: Manuel Lopez-Ibanez <manuel.lopez-ibanez@manchester.ac.uk>
Diff between mooplot versions 0.1.0 dated 2025-03-21 and 0.1.1 dated 2025-05-12
DESCRIPTION | 12 ++++++------ MD5 | 20 ++++++++++---------- NEWS.md | 7 +++++++ R/eafdiffplot.R | 26 ++++++++++++++------------ R/symdevplot.R | 28 ++++++++++++++-------------- R/utils.R | 8 +++++++- README.md | 6 +++++- build/partial.rdb |binary man/symdevplot.Rd | 20 ++++++++++---------- tests/testthat/test-eafdiffplot.R | 20 ++++++++++++-------- tests/testthat/test-symdevplot.R | 10 +++++----- 11 files changed, 90 insertions(+), 67 deletions(-)
Title: Time Series Clustering Utilities
Description: A set of measures of dissimilarity between time series to perform time series clustering. Metrics based on raw data, on generating models and on the forecast behavior are implemented. Some additional utilities related to time series clustering are also provided, such as clustering algorithms and cluster evaluation metrics.
Author: Pablo Montero Manso [cre],
Jose Vilar Fernandez [aut]
Maintainer: Pablo Montero Manso <pmontm@gmail.com>
Diff between TSclust versions 1.3.1 dated 2020-07-22 and 1.3.2 dated 2025-05-12
ChangeLog | 1 DESCRIPTION | 14 ++++----- MD5 | 69 +++++++++++++++++++++++----------------------- NAMESPACE | 2 - R/diss.R | 4 +- R/distpred.R | 6 ++-- build |only inst/CITATION | 8 ++--- man/SAX.Rd | 2 - man/TSclust-package.Rd | 2 - man/cluster.evaluation.Rd | 2 - man/diss.ACF.Rd | 2 - man/diss.AR.LPC.CEPS.Rd | 4 +- man/diss.AR.MAH.Rd | 2 - man/diss.AR.PIC.Rd | 4 +- man/diss.CDM.Rd | 2 - man/diss.CID.Rd | 2 - man/diss.COR.Rd | 2 - man/diss.CORT.Rd | 2 - man/diss.DTWARP.Rd | 2 - man/diss.DWT.Rd | 2 - man/diss.FRECHET.Rd | 2 - man/diss.INT.PER.Rd | 2 - man/diss.NCD.Rd | 2 - man/diss.PDC.Rd | 2 - man/diss.PER.Rd | 2 - man/diss.PRED.Rd | 2 - man/diss.Rd | 4 +- man/diss.SPEC.GLK.Rd | 2 - man/diss.SPEC.ISD.Rd | 2 - man/diss.SPEC.LLR.Rd | 2 - man/electricity.Rd | 2 - man/interest.rates.Rd | 2 - man/paired.tseries.Rd | 2 - man/pvalues.clust.Rd | 2 - man/synthetic.tseries.Rd | 2 - 36 files changed, 84 insertions(+), 82 deletions(-)
Title: Spherical Geometry Operators Using the S2 Geometry Library
Description: Provides R bindings for Google's s2 library for geometric calculations on
the sphere. High-performance constructors and exporters provide high compatibility
with existing spatial packages, transformers construct new geometries from existing
geometries, predicates provide a means to select geometries based on spatial
relationships, and accessors extract information about geometries.
Author: Dewey Dunnington [aut] ,
Edzer Pebesma [aut, cre] ,
Ege Rubak [aut],
Jeroen Ooms [ctb] ,
Google, Inc. [cph]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between s2 versions 1.1.7 dated 2024-07-17 and 1.1.8 dated 2025-05-12
s2-1.1.7/s2/src/Makevars.ucrt |only s2-1.1.7/s2/src/absl |only s2-1.1.7/s2/src/s2/base/mutex.h |only s2-1.1.7/s2/src/s2/base/stringprintf.cc |only s2-1.1.7/s2/src/s2/base/stringprintf.h |only s2-1.1.7/s2/src/s2/base/strtoint.cc |only s2-1.1.7/s2/src/s2/base/strtoint.h |only s2-1.1.7/s2/src/s2/s2closest_edge_query_testing.h |only s2-1.1.7/s2/src/s2/s2shapeutil_range_iterator.cc |only s2-1.1.7/s2/src/s2/s2shapeutil_range_iterator.h |only s2-1.1.7/s2/src/s2/s2testing.cc |only s2-1.1.7/s2/src/s2/s2testing.h |only s2-1.1.7/s2/src/s2/strings |only s2-1.1.7/s2/src/s2/util/bits/bits.cc |only s2-1.1.7/s2/src/s2/util/gtl/btree.h |only s2-1.1.7/s2/src/s2/util/gtl/btree_container.h |only s2-1.1.7/s2/src/s2/util/gtl/btree_map.h |only s2-1.1.7/s2/src/s2/util/gtl/btree_set.h |only s2-1.1.7/s2/src/s2/util/gtl/layout.h |only s2-1.1.7/s2/src/s2/util/math/vector3_hash.h |only s2-1.1.7/s2/tools/version.c |only s2-1.1.8/s2/DESCRIPTION | 17 s2-1.1.8/s2/MD5 | 1466 ++++++---- s2-1.1.8/s2/NEWS.md | 16 s2-1.1.8/s2/R/s2-options.R | 1 s2-1.1.8/s2/R/s2-transformers.R | 4 s2-1.1.8/s2/README.md | 54 s2-1.1.8/s2/build/partial.rdb |binary s2-1.1.8/s2/cleanup | 6 s2-1.1.8/s2/cleanup.win |only s2-1.1.8/s2/configure | 119 s2-1.1.8/s2/configure.win | 21 s2-1.1.8/s2/src/Makevars.in | 172 - 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s2-1.1.8/s2/src/s2/s2builder_graph.h | 127 s2-1.1.8/s2/src/s2/s2builder_layer.h | 4 s2-1.1.8/s2/src/s2/s2builderutil_closed_set_normalizer.cc | 19 s2-1.1.8/s2/src/s2/s2builderutil_closed_set_normalizer.h | 10 s2-1.1.8/s2/src/s2/s2builderutil_find_polygon_degeneracies.cc | 19 s2-1.1.8/s2/src/s2/s2builderutil_find_polygon_degeneracies.h | 1 s2-1.1.8/s2/src/s2/s2builderutil_get_snapped_winding_delta.cc |only s2-1.1.8/s2/src/s2/s2builderutil_get_snapped_winding_delta.h |only s2-1.1.8/s2/src/s2/s2builderutil_graph_shape.h | 2 s2-1.1.8/s2/src/s2/s2builderutil_lax_polygon_layer.cc | 20 s2-1.1.8/s2/src/s2/s2builderutil_lax_polygon_layer.h | 13 s2-1.1.8/s2/src/s2/s2builderutil_lax_polyline_layer.cc |only s2-1.1.8/s2/src/s2/s2builderutil_lax_polyline_layer.h |only s2-1.1.8/s2/src/s2/s2builderutil_s2point_vector_layer.cc | 11 s2-1.1.8/s2/src/s2/s2builderutil_s2point_vector_layer.h | 7 s2-1.1.8/s2/src/s2/s2builderutil_s2polygon_layer.cc | 16 s2-1.1.8/s2/src/s2/s2builderutil_s2polygon_layer.h | 5 s2-1.1.8/s2/src/s2/s2builderutil_s2polyline_layer.cc | 9 s2-1.1.8/s2/src/s2/s2builderutil_s2polyline_layer.h | 16 s2-1.1.8/s2/src/s2/s2builderutil_s2polyline_vector_layer.cc | 10 s2-1.1.8/s2/src/s2/s2builderutil_s2polyline_vector_layer.h | 31 s2-1.1.8/s2/src/s2/s2builderutil_snap_functions.cc | 17 s2-1.1.8/s2/src/s2/s2builderutil_snap_functions.h | 10 s2-1.1.8/s2/src/s2/s2builderutil_testing.cc | 77 s2-1.1.8/s2/src/s2/s2builderutil_testing.h | 47 s2-1.1.8/s2/src/s2/s2cap.cc | 23 s2-1.1.8/s2/src/s2/s2cap.h | 21 s2-1.1.8/s2/src/s2/s2cell.cc | 26 s2-1.1.8/s2/src/s2/s2cell.h | 89 s2-1.1.8/s2/src/s2/s2cell_id.cc | 114 s2-1.1.8/s2/src/s2/s2cell_id.h | 108 s2-1.1.8/s2/src/s2/s2cell_index.cc | 29 s2-1.1.8/s2/src/s2/s2cell_index.h | 41 s2-1.1.8/s2/src/s2/s2cell_iterator.h |only s2-1.1.8/s2/src/s2/s2cell_iterator_join.h |only s2-1.1.8/s2/src/s2/s2cell_iterator_testing.h |only s2-1.1.8/s2/src/s2/s2cell_range_iterator.h |only s2-1.1.8/s2/src/s2/s2cell_union.cc | 142 s2-1.1.8/s2/src/s2/s2cell_union.h | 120 s2-1.1.8/s2/src/s2/s2centroids.cc | 5 s2-1.1.8/s2/src/s2/s2closest_cell_query.cc | 10 s2-1.1.8/s2/src/s2/s2closest_cell_query.h | 5 s2-1.1.8/s2/src/s2/s2closest_cell_query_base.h | 35 s2-1.1.8/s2/src/s2/s2closest_edge_query.cc | 10 s2-1.1.8/s2/src/s2/s2closest_edge_query.h | 70 s2-1.1.8/s2/src/s2/s2closest_edge_query_base.h | 39 s2-1.1.8/s2/src/s2/s2closest_point_query.cc | 4 s2-1.1.8/s2/src/s2/s2closest_point_query.h | 3 s2-1.1.8/s2/src/s2/s2closest_point_query_base.h | 25 s2-1.1.8/s2/src/s2/s2coder.h |only s2-1.1.8/s2/src/s2/s2coder_testing.h |only s2-1.1.8/s2/src/s2/s2contains_point_query.h | 38 s2-1.1.8/s2/src/s2/s2contains_vertex_query.cc | 16 s2-1.1.8/s2/src/s2/s2convex_hull_query.cc | 52 s2-1.1.8/s2/src/s2/s2convex_hull_query.h | 1 s2-1.1.8/s2/src/s2/s2coords.cc | 2 s2-1.1.8/s2/src/s2/s2coords.h | 10 s2-1.1.8/s2/src/s2/s2coords_internal.h | 3 s2-1.1.8/s2/src/s2/s2crossing_edge_query.cc | 21 s2-1.1.8/s2/src/s2/s2crossing_edge_query.h | 6 s2-1.1.8/s2/src/s2/s2debug.cc | 7 s2-1.1.8/s2/src/s2/s2debug.h | 3 s2-1.1.8/s2/src/s2/s2distance_target.h | 8 s2-1.1.8/s2/src/s2/s2earth.cc | 7 s2-1.1.8/s2/src/s2/s2earth.h | 248 - 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s2-1.1.8/s2/src/s2/util/math/vector.h | 303 +- s2-1.1.8/s2/src/s2/util/units/physical-units.h | 78 s2-1.1.8/s2/src/s2/value_lexicon.h | 3 s2-1.1.8/s2/src/s2geography/build.cc | 6 s2-1.1.8/s2/src/s2geography/index.h | 8 s2-1.1.8/s2/tests/testthat/test-plot.R | 6 s2-1.1.8/s2/tests/testthat/test-s2-accessors.R | 2 s2-1.1.8/s2/tests/testthat/test-s2-cell.R | 2 s2-1.1.8/s2/tests/testthat/test-s2-transformers.R | 7 s2-1.1.8/s2/tests/testthat/test-vctrs.R | 6 s2-1.1.8/s2/tools/build_absl.sh |only s2-1.1.8/s2/tools/docker |only s2-1.1.8/s2/tools/pkgconfig |only s2-1.1.8/s2/tools/test_absl.cc |only s2-1.1.8/s2/tools/test_openssl.c |only s2-1.1.8/s2/tools/vendor |only s2-1.1.8/s2/tools/winlibs.R | 29 296 files changed, 12993 insertions(+), 7843 deletions(-)
Title: Tests Based on Ordinal Patterns
Description: Ordinal patterns describe the dynamics of a time series by looking at the ranks of subsequent observations. By comparing ordinal patterns of two times series, Schnurr (2014) <doi:10.1007/s00362-013-0536-8> defines a robust and non-parametric dependence measure: the ordinal pattern coefficient. Functions to calculate this and a method to detect a change in the pattern coefficient proposed in Schnurr and Dehling (2017) <doi:10.1080/01621459.2016.1164706> are provided. Furthermore, the package contains a function for calculating the ordinal pattern frequencies. Generalized ordinal patterns as proposed by Schnurr and Fischer (2022) <doi:10.1016/j.csda.2022.107472> are also considered.
Author: Alexander Duerre [aut],
Svenja Fischer [ctb],
Alexander Schnurr [aut],
Angelika Silbernagel [aut, cre]
Maintainer: Angelika Silbernagel <silbernagel@hsu-hh.de>
Diff between ordinalpattern versions 0.2.6 dated 2024-11-11 and 0.2.7 dated 2025-05-12
DESCRIPTION | 12 ++++++------ MD5 | 2 +- 2 files changed, 7 insertions(+), 7 deletions(-)
More information about ordinalpattern at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-08-25 0.2.3
2021-10-27 0.2.2
2020-05-15 0.2.1
2019-07-25 0.2.0
2018-11-14 0.1.0
Title: Accurate Generalized Linear Model
Description: Provides functions to fit Accurate Generalized Linear Model (AGLM) models, visualize them, and predict for new data. AGLM is defined as a regularized GLM which applies a sort of feature transformations using a discretization of numerical features and specific coding methodologies of dummy variables. For more information on AGLM, see Suguru Fujita, Toyoto Tanaka, Kenji Kondo and Hirokazu Iwasawa (2020) <https://www.institutdesactuaires.com/global/gene/link.php?doc_id=16273&fg=1>.
Author: Kenji Kondo [aut, cre, cph],
Kazuhisa Takahashi [ctb],
Hikari Banno [ctb]
Maintainer: Kenji Kondo <kkondo.odnokk@gmail.com>
Diff between aglm versions 0.4.0 dated 2021-06-09 and 0.4.1 dated 2025-05-12
aglm-0.4.0/aglm/build/aglm.pdf |only aglm-0.4.1/aglm/DESCRIPTION | 8 ++++---- aglm-0.4.1/aglm/MD5 | 26 +++++++++++++------------- aglm-0.4.1/aglm/NAMESPACE | 1 + aglm-0.4.1/aglm/NEWS.md | 4 ++++ aglm-0.4.1/aglm/R/accurate-glm.R | 22 +++++++++++----------- aglm-0.4.1/aglm/R/aglm-package.R | 4 ++-- aglm-0.4.1/aglm/R/coef-aglm.R | 4 ++-- aglm-0.4.1/aglm/R/predict-aglm.R | 10 +++++----- aglm-0.4.1/aglm/README.md | 11 +++++++---- aglm-0.4.1/aglm/build/stage23.rdb |only aglm-0.4.1/aglm/man/AccurateGLM-class.Rd | 22 +++++++++++----------- aglm-0.4.1/aglm/man/aglm-package.Rd | 16 ++++++++++++---- aglm-0.4.1/aglm/man/coef.AccurateGLM.Rd | 4 ++-- aglm-0.4.1/aglm/man/predict.AccurateGLM.Rd | 10 +++++----- 15 files changed, 79 insertions(+), 63 deletions(-)
Title: Version-Control for CRAN, GitHub, and GitLab Packages
Description: Make R scripts reproducible, by ensuring that
every time a given script is run, the same version of the used packages are
loaded (instead of whichever version the user running the script happens to
have installed). This is achieved by using the command
groundhog.library() instead of the base command library(), and including a
date in the call. The date is used to call on the same version of the
package every time (the most recent version available at that date).
Load packages from CRAN, GitHub, or Gitlab.
Author: Uri Simonsohn [aut, cre] ,
Hugo Gruson [ctb, aut]
Maintainer: Uri Simonsohn <urisohn@gmail.com>
Diff between groundhog versions 3.2.2 dated 2025-01-19 and 3.2.3 dated 2025-05-12
DESCRIPTION | 11 ++++---- MD5 | 10 +++---- R/groundhog.library.R | 2 - R/install.binaries.R | 26 +++++++++++++------- R/utils.R | 65 ++++++++++++++++++++++++++++++++++++++++++++++++-- R/zzz.R | 9 ++---- 6 files changed, 95 insertions(+), 28 deletions(-)