Title: Bayesian Geostatistics Using Predictive Stacking
Description: Fits Bayesian hierarchical spatial and spatial-temporal process
models for point-referenced Gaussian, Poisson, binomial, and binary data
using stacking of predictive densities. It involves sampling from
analytically available posterior distributions conditional upon candidate
values of the spatial process parameters and, subsequently assimilate
inference from these individual posterior distributions using Bayesian
predictive stacking. Our algorithm is highly parallelizable and hence, much
faster than traditional Markov chain Monte Carlo algorithms while delivering
competitive predictive performance. See Zhang, Tang, and Banerjee (2025)
<doi:10.48550/arXiv.2304.12414>, and, Pan, Zhang, Bradley, and Banerjee
(2025) <doi:10.48550/arXiv.2406.04655> for details.
Author: Soumyakanti Pan [aut, cre] ,
Sudipto Banerjee [aut]
Maintainer: Soumyakanti Pan <span18@ucla.edu>
Diff between spStack versions 1.0.1 dated 2024-10-08 and 1.1.0 dated 2025-07-11
DESCRIPTION | 37 - MD5 | 103 ++-- NAMESPACE | 7 NEWS.md | 8 R/predict.R |only R/recoverGLMscale.R |only R/sim_stvcPoisson.R |only R/spGLMexact.R | 28 - R/spGLMstack.R | 30 - R/spLMexact.R | 12 R/spLMstack.R | 23 R/spStack-package.R | 6 R/stackedSampler.R | 93 ++- R/stacking_weights.R | 1 R/stvcGLMexact.R |only R/stvcGLMstack.R |only R/utils.R | 175 ++++++- README.md | 14 build/partial.rdb |binary build/vignette.rds |binary data/sim_stvcPoisson.rda |only inst/doc/posterior-predictive.R |only inst/doc/posterior-predictive.Rmd |only inst/doc/posterior-predictive.html |only inst/doc/spStack.R | 238 ++-------- inst/doc/spStack.Rmd | 413 ++++------------- inst/doc/spStack.html | 879 +++++++++---------------------------- inst/doc/spatial-temporal.R |only inst/doc/spatial-temporal.Rmd |only inst/doc/spatial-temporal.html |only inst/doc/spatial.R |only inst/doc/spatial.Rmd |only inst/doc/spatial.html |only inst/doc/technical_overview.R |only inst/doc/technical_overview.Rmd |only inst/doc/technical_overview.html |only man/candidateModels.Rd |only man/figures/logo.png |binary man/get_stacking_weights.Rd | 1 man/posteriorPredict.Rd |only man/recoverGLMscale.Rd |only man/sim_stvcPoisson.Rd |only man/spGLMstack.Rd | 1 man/spLMstack.Rd | 1 man/spStack-package.Rd | 7 man/stackedSampler.Rd | 18 man/stvcGLMexact.Rd |only man/stvcGLMstack.Rd |only src/MatrixAlgos.cpp | 277 +++++++++++ src/MatrixAlgos.h | 17 src/init.cpp | 9 src/predict_spGLM.cpp |only src/predict_spLM.cpp |only src/predict_stvcGLM.cpp |only src/recoverScale_spGLM.cpp |only src/recoverScale_stvcGLM.cpp |only src/spGLMexact.cpp | 10 src/spGLMexactLOO.cpp | 8 src/spLMexactLOO.cpp | 261 +++++++--- src/spStack.h | 37 + src/stvcGLMexact.cpp |only src/stvcGLMexactLOO.cpp |only src/util.cpp | 391 ++++++++++++++++ src/util.h | 30 + vignettes/posterior-predictive.Rmd |only vignettes/refs.bib | 25 - vignettes/spStack.Rmd | 413 ++++------------- vignettes/spatial-temporal.Rmd |only vignettes/spatial.Rmd |only vignettes/technical_overview.Rmd |only 70 files changed, 1861 insertions(+), 1712 deletions(-)
Title: Lightweight Extension of the Base R Graphics System
Description: Lightweight extension of the base R graphics system, with support
for automatic legends, facets, themes, and various other enhancements.
Author: Grant McDermott [aut, cre] ,
Vincent Arel-Bundock [aut] ,
Achim Zeileis [aut] ,
Etienne Bacher [ctb]
Maintainer: Grant McDermott <gmcd@amazon.com>
Diff between tinyplot versions 0.4.1 dated 2025-06-02 and 0.4.2 dated 2025-07-11
DESCRIPTION | 12 ++-- MD5 | 39 +++++++------- NEWS.md | 31 +++++++++++ R/environment.R |only R/hooks.R |only R/tinyplot.R | 21 +++++-- R/tinyplot_add.R | 15 ----- R/tinytheme.R | 3 - R/tpar.R | 16 +++-- R/type_abline.R | 138 ++++++++++++++++++++++++++++++++++++++++++-------- R/type_barplot.R | 15 ++++- R/type_hline.R | 53 ++++++++++++++----- R/type_spineplot.R | 30 ++++++++-- R/type_text.R | 39 +++++++++++--- R/type_vline.R | 52 ++++++++++++++---- R/zzz.R | 18 ++---- man/set_hooks.Rd |only man/tinyplot_add.Rd | 14 ----- man/type_abline.Rd | 72 +++++++++++++++++++++++--- man/type_barplot.Rd | 9 ++- man/type_spineplot.Rd | 12 +++- man/type_text.Rd | 29 +++++++++- 22 files changed, 460 insertions(+), 158 deletions(-)
Title: Regularized Bayesian Estimator for Two-Level Latent Variable
Models
Description: Implements a regularized Bayesian estimator that optimizes the estimation
of between-group coefficients for multilevel latent variable models by minimizing
mean squared error (MSE) and balancing variance and bias. The package provides more reliable
estimates in scenarios with limited data, offering a robust solution for accurate
parameter estimation in two-level latent variable models. It is designed for
researchers in psychology, education, and related fields who face challenges in
estimating between-group effects under small sample sizes and low intraclass
correlation coefficients. Dashuk et al. (2024) <doi:10.13140/RG.2.2.18148.39048>
derived the optimal regularized Bayesian estimator;
Dashuk et al. (2024) <doi:10.13140/RG.2.2.34350.01604> extended it to
the multivariate case; and Luedtke et al. (2008) <doi:10.1037/a0012869>
formalized the two-level latent variable framework.
Author: Valerii Dashuk [aut, cre],
Binayak Timilsina [aut],
Martin Hecht [aut],
Steffen Zitzmann [aut]
Maintainer: Valerii Dashuk <vadashuk@gmail.com>
Diff between MultiLevelOptimalBayes versions 0.0.1.6 dated 2025-05-29 and 0.0.2.0 dated 2025-07-11
DESCRIPTION | 6 +-- MD5 | 14 ++++----- R/mlob.R | 45 ++++++++++++++++------------- README.md | 34 ++++++++++----------- inst/doc/MultiLevelOptimalBayes-Intro.Rmd | 18 +++++------ inst/doc/MultiLevelOptimalBayes-Intro.html | 24 +++++++-------- man/mlob.Rd | 2 + vignettes/MultiLevelOptimalBayes-Intro.Rmd | 18 +++++------ 8 files changed, 85 insertions(+), 76 deletions(-)
More information about MultiLevelOptimalBayes at CRAN
Permanent link
Title: Integrative Pathway Enrichment Analysis of Multivariate Omics
Data
Description: Framework for analysing multiple omics datasets in the context of molecular pathways, biological processes and other types of gene sets. The package uses p-value merging to combine gene- or protein-level signals, followed by ranked hypergeometric tests to determine enriched pathways and processes. Genes can be integrated using directional constraints that reflect how the input datasets are expected interact with one another. This approach allows researchers to interpret a series of omics datasets in the context of known biology and gene function, and discover associations that are only apparent when several datasets are combined. The recent version of the package is part of the following publication: Directional integration and pathway enrichment analysis for multi-omics data. Slobodyanyuk M^, Bahcheli AT^, Klein ZP, Bayati M, Strug LJ, Reimand J. Nature Communications (2024) <doi:10.1038/s41467-024-49986-4>.
Author: Juri Reimand [aut, cre],
Jonathan Barenboim [ctb],
Mykhaylo Slobodyanyuk [aut]
Maintainer: Juri Reimand <juri.reimand@utoronto.ca>
Diff between ActivePathways versions 2.0.5 dated 2024-07-28 and 2.0.6 dated 2025-07-11
DESCRIPTION | 8 - MD5 | 18 +-- NAMESPACE | 2 NEWS.md | 5 R/merge_results.r |only inst/doc/ActivePathways-vignette.R | 31 +++++ inst/doc/ActivePathways-vignette.Rmd | 55 ++++++++- inst/doc/ActivePathways-vignette.html | 202 +++++++++++++++++++++++----------- man/merge_gmt.Rd |only man/merge_results.Rd |only tests/testthat/test_merge_results.r |only vignettes/ActivePathways-vignette.Rmd | 55 ++++++++- 12 files changed, 295 insertions(+), 81 deletions(-)
More information about ActivePathways at CRAN
Permanent link
Title: Parametric Time-Dependent Receiver Operating Characteristic
Description: Producing the time-dependent receiver operating characteristic (ROC) curve through parametric approaches. Tools for
generating random data, fitting, predicting and check goodness of fit are prepared. The methods are
developed from the theoretical framework of proportional hazard model and copula functions.
Using this package, users can now simulate parametric time-dependent ROC and run experiment
to understand the behavior of the curve under different scenario.
Author: Faiz Azhar [aut, cre, cph] ,
Adina Najwa Kamarudin [cph, ths] ,
Universiti Teknologi Malaysia, UTM [cph],
Universiti Malaya, UM [cph]
Maintainer: Faiz Azhar <faiz.azhar241@gmail.com>
Diff between parTimeROC versions 0.1.1 dated 2025-04-11 and 0.2.0 dated 2025-07-11
DESCRIPTION | 21 ++++++++++++--------- MD5 | 4 ++-- NEWS.md | 2 ++ 3 files changed, 16 insertions(+), 11 deletions(-)
Title: ISO 3166-1 Country Codes
Description: ISO 3166-1 country codes and ISO 4217 currency codes provided
by the International Organization for Standardization.
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between isocountry versions 0.4.0 dated 2025-06-06 and 0.5.0 dated 2025-07-11
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- NEWS.md | 5 +++++ R/data.R | 16 +++++++++++++--- README.md | 7 ++++--- data/isocountry.rda |binary data/isocurrency.rda |binary man/isocountry.Rd | 14 ++++++++++++-- man/isocurrency.Rd | 2 +- 9 files changed, 46 insertions(+), 20 deletions(-)
Title: Tools for Wikidata and Wikipedia
Description: A set of wrappers intended to check, read and download information from the Wikimedia sources. It is specifically created to work with names of celebrities, in which case their information and statistics can be downloaded. Additionally, it also builds links and snippets to use in combination with the function gallery() in netCoin package.
Author: Modesto Escobar [aut, cph, cre] ,
Angel Zazo [aut],
Carlos Prieto [aut] ,
David Barrios [aut],
Cristina Calvo [aut]
Maintainer: Modesto Escobar <modesto@usal.es>
Diff between wikiTools versions 1.2.8 dated 2025-03-31 and 1.2.14 dated 2025-07-11
DESCRIPTION | 20 +++++--- MD5 | 48 ++++++++++---------- NAMESPACE | 3 + R/w_Exhibit.R |only R/wikiTools.R | 44 ++++++++++++++++++ R/wiki_utils.R | 30 ++++++------ README.md | 4 - build/vignette.rds |binary inst/doc/wiki_utils.html | 30 ++++++------ man/extractWiki.Rd | 2 man/filext.Rd | 58 ++++++++++++------------ man/getFiles.Rd | 102 +++++++++++++++++++++---------------------- man/getWikiFiles.Rd | 88 ++++++++++++++++++------------------- man/httrGetJSON.Rd | 62 +++++++++++++------------- man/nametoWikiFrame.Rd | 74 +++++++++++++++---------------- man/nametoWikiHtml.Rd | 70 ++++++++++++++--------------- man/nametoWikiURL.Rd | 74 +++++++++++++++---------------- man/pop_up.Rd |only man/preName.Rd | 60 ++++++++++++------------- man/searchWiki.Rd | 96 ++++++++++++++++++++-------------------- man/selectLang.Rd |only man/urltoFrame.Rd | 70 ++++++++++++++--------------- man/urltoHtml.Rd | 86 ++++++++++++++++++------------------ man/validUrl.Rd | 56 +++++++++++------------ man/w_Exhibit.Rd |only man/w_SearchByAuthority.Rd | 6 +- man/w_SearchByIdentifiers.Rd | 6 +- 27 files changed, 573 insertions(+), 516 deletions(-)
Title: Find Differences Between R Objects
Description: Compare complex R objects and reveal the key differences.
Designed particularly for use in testing packages where being able to
quickly isolate key differences makes understanding test failures much
easier.
Author: Hadley Wickham [aut, cre],
Posit Software, PBC [cph, fnd]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between waldo versions 0.6.1 dated 2024-11-07 and 0.6.2 dated 2025-07-11
DESCRIPTION | 6 MD5 | 36 ++--- NEWS.md | 8 + R/compare-class.R | 6 R/compare-data-frame.R | 16 +- R/compare-opts.R | 24 +-- R/compare-value.R | 86 ++++++++---- R/compare.R | 219 ++++++++++++++++++++++--------- R/diff.R | 104 +++++++++----- R/ses.R | 13 + R/utils.R | 13 - tests/testthat/_snaps/compare.md | 72 ++++++---- tests/testthat/f2.R | 4 tests/testthat/test-compare-data-frame.R | 5 tests/testthat/test-compare-value.R | 30 +++- tests/testthat/test-compare.R | 189 +++++++++++++++++--------- tests/testthat/test-proxy.R | 2 tests/testthat/test-ses.R | 3 tests/testthat/test-utils.R | 10 + 19 files changed, 573 insertions(+), 273 deletions(-)
Title: Estimated Marginal Means, aka Least-Squares Means
Description: Obtain estimated marginal means (EMMs) for many linear, generalized
linear, and mixed models. Compute contrasts or linear functions of EMMs,
trends, and comparisons of slopes. Plots and other displays.
Least-squares means are discussed, and the term "estimated marginal means"
is suggested, in Searle, Speed, and Milliken (1980) Population marginal means
in the linear model: An alternative to least squares means, The American
Statistician 34(4), 216-221 <doi:10.1080/00031305.1980.10483031>.
Author: Russell V. Lenth [aut, cre, cph],
Balazs Banfai [ctb],
Ben Bolker [ctb],
Paul Buerkner [ctb],
Iago Gine-Vazquez [ctb],
Maxime Herve [ctb],
Maarten Jung [ctb],
Jonathon Love [ctb],
Fernando Miguez [ctb],
Julia Piaskowski [ctb],
Hannes Riebl [ctb],
Hen [...truncated...]
Maintainer: Russell V. Lenth <russell-lenth@uiowa.edu>
Diff between emmeans versions 1.11.1 dated 2025-05-04 and 1.11.2 dated 2025-07-11
DESCRIPTION | 8 +++---- MD5 | 40 ++++++++++++++++++------------------- NEWS.md | 7 ++++++ R/ordinal-support.R | 4 +-- R/ref-grid.R | 16 +++++--------- inst/doc/AQuickStart.html | 4 +-- inst/doc/FAQs.html | 4 +-- inst/doc/basics.html | 6 ++--- inst/doc/comparisons.html | 10 ++++----- inst/doc/confidence-intervals.html | 14 ++++++------ inst/doc/interactions.html | 18 ++++++++-------- inst/doc/messy-data.html | 4 +-- inst/doc/models.html | 4 +-- inst/doc/predictions.html | 4 +-- inst/doc/re-engineering-clds.html | 4 +-- inst/doc/sophisticated.html | 4 +-- inst/doc/transformations.html | 6 ++--- inst/doc/utilities.html | 4 +-- inst/doc/vignette-topics.html | 4 +-- inst/doc/xplanations.html | 4 +-- inst/doc/xtending.html | 8 +++---- 21 files changed, 90 insertions(+), 87 deletions(-)
Title: Multilevel Hidden Markov Models Using Bayesian Estimation
Description: An implementation of the multilevel (also known as mixed or random
effects) hidden Markov model using Bayesian estimation in R. The multilevel
hidden Markov model (HMM) is a generalization of the well-known hidden
Markov model, for the latter see Rabiner (1989) <doi:10.1109/5.18626>. The
multilevel HMM is tailored to accommodate (intense) longitudinal data of
multiple individuals simultaneously, see e.g., de Haan-Rietdijk et al.
<doi:10.1080/00273171.2017.1370364>. Using a multilevel framework, we allow
for heterogeneity in the model parameters (transition probability matrix and
conditional distribution), while estimating one overall HMM. The model can
be fitted on multivariate data with either a categorical, normal, or Poisson
distribution, and include individual level covariates (allowing for e.g.,
group comparisons on model parameters). Parameters are estimated using
Bayesian estimation utilizing the forward-backward recursion within a hybrid
Metropolis within Gibbs samp [...truncated...]
Author: Emmeke Aarts [aut, cre],
Sebastian Mildiner Moraga [aut]
Maintainer: Emmeke Aarts <e.aarts@uu.nl>
Diff between mHMMbayes versions 1.1.0 dated 2024-04-01 and 1.1.1 dated 2025-07-11
mHMMbayes-1.1.0/mHMMbayes/inst/doc/estimation-mhmm.R |only mHMMbayes-1.1.0/mHMMbayes/inst/doc/estimation-mhmm.Rmd |only mHMMbayes-1.1.0/mHMMbayes/inst/doc/estimation-mhmm.pdf |only mHMMbayes-1.1.0/mHMMbayes/vignettes/estimation-mhmm.Rmd |only mHMMbayes-1.1.1/mHMMbayes/DESCRIPTION | 8 mHMMbayes-1.1.1/mHMMbayes/MD5 | 40 - mHMMbayes-1.1.1/mHMMbayes/NEWS.md | 8 mHMMbayes-1.1.1/mHMMbayes/R/mHMM.R | 310 ++++++----- mHMMbayes-1.1.1/mHMMbayes/R/obtain_emiss.R | 14 mHMMbayes-1.1.1/mHMMbayes/R/obtain_gamma.R | 3 mHMMbayes-1.1.1/mHMMbayes/R/plot.mHMM.R | 6 mHMMbayes-1.1.1/mHMMbayes/R/sim_mHMM.R | 19 mHMMbayes-1.1.1/mHMMbayes/R/summary.mHMM.R | 14 mHMMbayes-1.1.1/mHMMbayes/R/vit_mHMM.R | 4 mHMMbayes-1.1.1/mHMMbayes/README.md | 84 ++ mHMMbayes-1.1.1/mHMMbayes/build/partial.rdb |binary mHMMbayes-1.1.1/mHMMbayes/build/vignette.rds |binary mHMMbayes-1.1.1/mHMMbayes/inst/doc/estimation-mhmm-html.R |only mHMMbayes-1.1.1/mHMMbayes/inst/doc/estimation-mhmm-html.Rmd |only mHMMbayes-1.1.1/mHMMbayes/inst/doc/estimation-mhmm-html.html |only mHMMbayes-1.1.1/mHMMbayes/inst/doc/tutorial-mhmm.R | 114 ++-- mHMMbayes-1.1.1/mHMMbayes/inst/doc/tutorial-mhmm.Rmd | 10 mHMMbayes-1.1.1/mHMMbayes/inst/doc/tutorial-mhmm.html | 38 - mHMMbayes-1.1.1/mHMMbayes/vignettes/estimation-mhmm-html.Rmd |only mHMMbayes-1.1.1/mHMMbayes/vignettes/tutorial-mhmm.Rmd | 10 25 files changed, 419 insertions(+), 263 deletions(-)
Title: Design and Analysis of Hierarchical Composite Endpoints
Description: Simulate and analyze hierarchical composite endpoints. Includes implementation for the kidney hierarchical composite endpoint as defined in Heerspink HL et al (2023) “Development and validation of a new hierarchical composite end point for clinical trials of kidney disease progression” (Journal of the American Society of Nephrology 34 (2): 2025–2038, <doi:10.1681/ASN.0000000000000243>). Win odds, also called Wilcoxon-Mann-Whitney or success odds, is the main analysis method. Other win statistics (win probability, win ratio, net benefit) are also implemented in the univariate case, provided there is no censoring. The win probability analysis is based on the Brunner-Munzel test and uses the DeLong-DeLong-Clarke-Pearson variance estimator, as described by Brunner and Konietschke (2025) in “An unbiased rank-based estimator of the Mann–Whitney variance including the case of ties” (Statistical Papers 66 (1): 20, <doi:10.1007/s00362-024-01635-0>). Stratification and covariate adju [...truncated...]
Author: Samvel B. Gasparyan [aut, cre]
Maintainer: Samvel B. Gasparyan <gasparyan.co@gmail.com>
Diff between hce versions 0.7.2 dated 2025-05-14 and 0.8.0 dated 2025-07-11
hce-0.7.2/hce/R/simADHCE.R |only hce-0.7.2/hce/man/simADHCE.Rd |only hce-0.8.0/hce/DESCRIPTION | 10 +++--- hce-0.8.0/hce/MD5 | 48 +++++++++++++++--------------- hce-0.8.0/hce/NAMESPACE | 2 - hce-0.8.0/hce/NEWS.md | 7 ++++ hce-0.8.0/hce/R/as_hce.data.frame.R | 41 +++++++++++++++++++++++-- hce-0.8.0/hce/R/simHCE.R | 43 +++++++++++++++++++++----- hce-0.8.0/hce/R/simKHCE.R |only hce-0.8.0/hce/R/simORD.R | 2 - hce-0.8.0/hce/R/summaryWO_data_frame.R | 2 - hce-0.8.0/hce/R/summaryWO_formula.R | 5 +-- hce-0.8.0/hce/R/summaryWO_hce.R | 2 - hce-0.8.0/hce/data/KHCE.rda |binary hce-0.8.0/hce/inst/doc/Introduction.Rmd | 4 +- hce-0.8.0/hce/inst/doc/Introduction.html | 39 ++++++++++++------------ hce-0.8.0/hce/inst/doc/Wins.html | 4 +- hce-0.8.0/hce/inst/doc/hce.html | 4 +- hce-0.8.0/hce/inst/doc/maraca.html | 4 +- hce-0.8.0/hce/man/simHCE.Rd | 7 +++- hce-0.8.0/hce/man/simKHCE.Rd |only hce-0.8.0/hce/man/simORD.Rd | 2 - hce-0.8.0/hce/man/summaryWO.data.frame.Rd | 2 - hce-0.8.0/hce/man/summaryWO.formula.Rd | 3 + hce-0.8.0/hce/man/summaryWO.hce.Rd | 2 - hce-0.8.0/hce/vignettes/Introduction.Rmd | 4 +- hce-0.8.0/hce/vignettes/REFERENCES.bib | 2 - 27 files changed, 157 insertions(+), 82 deletions(-)
Title: Implement Download Buttons in 'rmarkdown'
Description: Implement download buttons in HTML output from 'rmarkdown' without the need for 'runtime:shiny'.
Author: Felipe Mattioni Maturana [aut, cre] ,
John Coene [ctb]
Maintainer: Felipe Mattioni Maturana <felipe.mattioni@med.uni-tuebingen.de>
Diff between downloadthis versions 0.4.1 dated 2024-10-14 and 0.5.0 dated 2025-07-11
downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-brands-400.eot |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-brands-400.svg |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-brands-400.woff |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-regular-400.eot |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-regular-400.svg |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-regular-400.woff |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-solid-900.eot |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-solid-900.svg |only downloadthis-0.4.1/downloadthis/inst/assets/webfonts/fa-solid-900.woff |only downloadthis-0.5.0/downloadthis/DESCRIPTION | 14 +-- downloadthis-0.5.0/downloadthis/MD5 | 45 ++++------ downloadthis-0.5.0/downloadthis/NEWS.md | 5 + downloadthis-0.5.0/downloadthis/R/utils.R | 8 - downloadthis-0.5.0/downloadthis/build/vignette.rds |binary downloadthis-0.5.0/downloadthis/inst/assets/css/all.min.css | 8 - downloadthis-0.5.0/downloadthis/inst/assets/css/v4-shims.min.css | 4 downloadthis-0.5.0/downloadthis/inst/assets/js/script.js | 2 downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-brands-400.ttf |binary downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-brands-400.woff2 |binary downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-regular-400.ttf |binary downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-regular-400.woff2 |binary downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-solid-900.ttf |binary downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-solid-900.woff2 |binary downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-v4compatibility.ttf |binary downloadthis-0.5.0/downloadthis/inst/assets/webfonts/fa-v4compatibility.woff2 |binary downloadthis-0.5.0/downloadthis/inst/doc/button_types.html | 8 - downloadthis-0.5.0/downloadthis/inst/doc/customization.html | 2 downloadthis-0.5.0/downloadthis/inst/doc/downloadthis.html | 14 +-- 28 files changed, 53 insertions(+), 57 deletions(-)
Title: Profiling a Log-Likelihood to Calculate Confidence Intervals
Description: Provides tools for profiling a user-supplied log-likelihood
function to calculate confidence intervals for model parameters. Speed of
computation can be improved by adjusting the step sizes in the profiling
and/or starting the profiling from limits based on the approximate large
sample normal distribution for the maximum likelihood estimator of a
parameter. The accuracy of the limits can be set by the user. A plot method
visualises the log-likelihood and confidence interval. Cases where the
profile log-likelihood flattens above the value at which a confidence limit
is defined can be handled, leading to a limit at plus or minus infinity.
Disjoint confidence intervals will not be found.
Author: Paul J. Northrop [aut, cre, cph]
Maintainer: Paul J. Northrop <p.northrop@ucl.ac.uk>
Diff between profileCI versions 1.0.0 dated 2025-06-04 and 1.1.0 dated 2025-07-11
DESCRIPTION | 15 MD5 | 37 + NAMESPACE | 1 NEWS.md |only R/profileCI-internal.R | 584 ++++++++++++++++++++----------- R/profileCI-logLikFn.R | 34 + R/profileCI-methods.R | 6 R/profileCI-package.R | 8 R/profileCI.R | 79 +++- README.md | 20 - man/figures/README-unnamed-chunk-5-1.png |binary man/logLikFn.Rd | 15 man/profileCI-internal.Rd | 21 + man/profileCI-package.Rd | 6 man/profileCI.Rd | 46 ++ tests/testthat.R | 24 - tests/testthat/setup.R | 2 tests/testthat/test-profileCI-bounds.R |only tests/testthat/test-profileCI-flat.R |only tests/testthat/test-profileCI-methods.R | 4 tests/testthat/test-profileCI.R | 1 21 files changed, 646 insertions(+), 257 deletions(-)
Title: 'Praat Picture' Style Plots of Acoustic Data
Description: Quickly and easily generate plots of acoustic data aligned with transcriptions similar to those made in 'Praat' using either derived signals generated directly in R with 'wrassp' or imported derived signals from 'Praat'. Provides easy and fast out-of-the-box solutions but also a high extent of flexibility. Also provides options for embedding audio in figures and animating figures.
Author: Rasmus Puggaard-Rode [aut, cre, cph]
Maintainer: Rasmus Puggaard-Rode <r.puggaard@phonetik.uni-muenchen.de>
Diff between praatpicture versions 1.4.3 dated 2025-05-13 and 1.5.0 dated 2025-07-11
praatpicture-1.4.3/praatpicture/R/praat_pitchRawAC.R |only praatpicture-1.4.3/praatpicture/R/zzz.R |only praatpicture-1.4.3/praatpicture/man/praat_pitchRawAC.Rd |only praatpicture-1.5.0/praatpicture/DESCRIPTION | 16 praatpicture-1.5.0/praatpicture/MD5 | 59 praatpicture-1.5.0/praatpicture/NAMESPACE | 3 praatpicture-1.5.0/praatpicture/NEWS.md | 284 - praatpicture-1.5.0/praatpicture/R/conv2sc.R | 88 praatpicture-1.5.0/praatpicture/R/draw_arrow.R | 58 praatpicture-1.5.0/praatpicture/R/draw_rectangle.R | 56 praatpicture-1.5.0/praatpicture/R/formantplot.R | 485 +- praatpicture-1.5.0/praatpicture/R/intensity_overlay.R |only praatpicture-1.5.0/praatpicture/R/intensityplot.R | 287 - praatpicture-1.5.0/praatpicture/R/make_TextGrid.R | 154 praatpicture-1.5.0/praatpicture/R/make_annot.R | 68 praatpicture-1.5.0/praatpicture/R/pitch_overlay.R |only praatpicture-1.5.0/praatpicture/R/pitchplot.R | 446 +- praatpicture-1.5.0/praatpicture/R/praatpicture.R | 1783 +++++----- praatpicture-1.5.0/praatpicture/R/shiny_praatpicture.R | 30 praatpicture-1.5.0/praatpicture/R/specplot.R | 994 ++--- praatpicture-1.5.0/praatpicture/R/talking_praatpicture.R | 174 praatpicture-1.5.0/praatpicture/R/tg_createTier.R | 208 - praatpicture-1.5.0/praatpicture/R/waveplot.R | 413 +- praatpicture-1.5.0/praatpicture/inst/shiny/shiny_praatpicture/server.R | 1624 ++++----- praatpicture-1.5.0/praatpicture/inst/shiny/shiny_praatpicture/ui.R | 744 ++-- praatpicture-1.5.0/praatpicture/man/formantplot.Rd | 9 praatpicture-1.5.0/praatpicture/man/intensity_overlay.Rd |only praatpicture-1.5.0/praatpicture/man/intensityplot.Rd | 9 praatpicture-1.5.0/praatpicture/man/make_annot.Rd | 62 praatpicture-1.5.0/praatpicture/man/pitch_overlay.Rd |only praatpicture-1.5.0/praatpicture/man/pitchplot.Rd | 7 praatpicture-1.5.0/praatpicture/man/praatpicture.Rd | 15 praatpicture-1.5.0/praatpicture/man/shiny_praatpicture.Rd | 38 praatpicture-1.5.0/praatpicture/man/waveplot.Rd | 104 34 files changed, 4190 insertions(+), 4028 deletions(-)
More information about CompositionalHDDA at CRAN
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Title: Checking and Simplifying Validation Rule Sets
Description: Rule sets with validation rules may contain redundancies or contradictions.
Functions for finding redundancies and problematic rules are provided,
given a set a rules formulated with 'validate'.
Author: Edwin de Jonge [aut, cre] ,
Mark van der Loo [aut],
Jacco Daalmans [ctb]
Maintainer: Edwin de Jonge <edwindjonge@gmail.com>
Diff between validatetools versions 0.5.2 dated 2023-09-30 and 0.6.1 dated 2025-07-11
DESCRIPTION | 13 +- MD5 | 91 +++++++++--------- NAMESPACE | 2 NEWS.md | 17 +++ R/categorical.R | 4 R/conditional.R | 4 R/contradicted.R | 29 ++++- R/detect_boundary.R | 25 ++--- R/detect_contradicting_if_rules.R |only R/detect_fixed_variables.R | 13 +- R/dnf.R | 34 ++++++ R/feasible.R | 99 +++++++++++++++----- R/implied_by.R | 26 ++++- R/linear.R | 4 R/mip_lpsolve.R | 3 R/mip_rule.R | 1 R/redundancy.R | 41 ++++++-- R/simplify_conditional.R | 41 +++++++- R/simplify_rules.R | 15 +-- R/soft-rule.R | 6 + R/substitute_values.R | 7 - R/utils.R | 6 - R/validatetools-package.R | 29 +++-- man/detect_boundary_cat.Rd | 11 +- man/detect_boundary_num.Rd | 14 +- man/detect_contradicting_if_rules.Rd |only man/detect_fixed_variables.Rd | 7 - man/detect_infeasible_rules.Rd | 23 +++- man/detect_redundancy.Rd | 18 ++- man/expect_values.Rd | 1 man/is_categorical.Rd | 4 man/is_conditional.Rd | 4 man/is_contradicted_by.Rd | 21 +++- man/is_implied_by.Rd | 16 ++- man/is_infeasible.Rd | 27 ++++- man/is_linear.Rd | 2 man/make_feasible.Rd | 33 ++++-- man/remove_redundancy.Rd | 16 +-- man/simplify_conditional.Rd | 15 ++- man/simplify_fixed_variables.Rd | 6 - man/simplify_rules.Rd | 16 ++- man/substitute_values.Rd | 3 man/translate_mip_lp.Rd | 1 man/validatetools.Rd | 49 +++++++-- tests/testthat/detect_contradicting_if_rules.txt |only tests/testthat/test-cat_domain.R |only tests/testthat/test-detect_contradicting_if_rules.R |only tests/testthat/test-feasible.R | 2 tests/testthat/test-simplify_conditional.R | 15 +++ 49 files changed, 568 insertions(+), 246 deletions(-)
Title: Response Item Networks
Description: Contains various tools to perform and visualize Response Item Networks ('ResIN's'). 'ResIN' binarizes ordered-categorical and qualitative response choices from (survey) data, calculates pairwise associations and maps the location of each item response as a node in a force-directed network. Please refer to <https://www.resinmethod.net/> for more details.
Author: Philip Warncke [cre, aut],
Dino Carpentras [aut],
Adrian Lueders [aut]
Maintainer: Philip Warncke <pwarncke@live.unc.edu>
Diff between ResIN versions 2.1.0 dated 2025-06-13 and 2.2.0 dated 2025-07-11
DESCRIPTION | 6 - MD5 | 30 ++--- R/Boostrap_example.R | 2 R/ResIN.R | 27 ++-- R/ResIN_boots_extract.R | 68 ++++-------- R/ResIN_boots_prepare.R | 8 - R/globals.R | 1 data/Bootstrap_example.rda |binary inst/doc/ResIN-VIGNETTE.R | 29 ++--- inst/doc/ResIN-VIGNETTE.Rmd | 51 ++++----- inst/doc/ResIN-VIGNETTE.html | 235 +++++++++++++++++++++---------------------- man/Bootstrap_example.Rd | 2 man/ResIN.Rd | 3 man/ResIN_boots_extract.Rd | 2 man/ResIN_boots_prepare.Rd | 4 vignettes/ResIN-VIGNETTE.Rmd | 51 ++++----- 16 files changed, 252 insertions(+), 267 deletions(-)
More information about MeasurementDiagnostics at CRAN
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Title: IUCN Redlisting Tools
Description: Includes algorithms to facilitate the assessment of extinction risk of species according to the IUCN (International Union for Conservation of Nature, see <https://iucn.org/> for more information) red list criteria.
Author: Pedro Cardoso [aut] ,
Vasco V. Branco [cre, aut]
Maintainer: Vasco V. Branco <vasco.branco@helsinki.fi>
Diff between red versions 1.6.2 dated 2025-05-10 and 1.6.3 dated 2025-07-11
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/main.R | 29 +++++++++++++++-------------- man/aoo.Rd | 6 ++++-- 4 files changed, 26 insertions(+), 23 deletions(-)
Title: Retrieve, Harmonise and Map Open Data Regarding the Italian
School System
Description: Compiles and displays the available data sets regarding the Italian school system, with a focus on the infrastructural aspects.
Input datasets are downloaded from the web, with the aim of updating everything to real time.
The functions are divided in four main modules, namely
'Get', to scrape raw data from the web
'Util', various utilities needed to process raw data
'Group', to aggregate data at the municipality or province level
'Map', to visualize the output datasets.
Author: Leonardo Cefalo [aut, cre] ,
Alessio Pollice [ctb, ths] ,
Paolo Maranzano [ctb]
Maintainer: Leonardo Cefalo <leonardo.cefalo@uniba.it>
Diff between SchoolDataIT versions 0.2.6 dated 2025-05-14 and 0.2.7 dated 2025-07-11
DESCRIPTION | 8 - MD5 | 20 +-- NEWS.md | 5 R/Get_AdmUnNames.R | 5 R/Get_BroadBand.R | 306 ++++++++++++++++++++++------------------------ R/Get_School2mun.R | 158 ++++++++++++----------- R/Group_BroadBand.R | 2 R/Set_DB.R | 3 R/Util_BroadBand2mun.R |only README.md | 9 - man/Get_BroadBand.Rd | 42 ++++-- man/Util_BroadBand2mun.Rd |only 12 files changed, 292 insertions(+), 266 deletions(-)
Title: Framework for Easy Statistical Modeling, Visualization, and
Reporting
Description: A meta-package that installs and loads a set of packages from
'easystats' ecosystem in a single step. This collection of packages provide
a unifying and consistent framework for statistical modeling, visualization,
and reporting. Additionally, it provides articles targeted at instructors for
teaching 'easystats', and a dashboard targeted at new R users for easily
conducting statistical analysis by accessing summary results, model fit indices,
and visualizations with minimal programming.
Author: Daniel Luedecke [aut, cre] ,
Dominique Makowski [aut] ,
Mattan S. Ben-Shachar [aut] ,
Indrajeet Patil [aut] ,
Brenton M. Wiernik [aut] ,
Etienne Bacher [aut] ,
Remi Theriault [aut]
Maintainer: Daniel Luedecke <d.luedecke@uke.de>
Diff between easystats versions 0.7.4 dated 2025-02-06 and 0.7.5 dated 2025-07-11
DESCRIPTION | 36 ++++++++++++++++++--------------- MD5 | 39 +++++++++++++++++++----------------- NAMESPACE | 11 ++++++++++ NEWS.md | 9 ++++++++ R/easystats_citations.R |only R/easystats_update.R | 7 ++++-- R/install_easystats.R | 29 ++++++++++++++++++++------ R/install_suggested.R | 17 ++++++--------- README.md | 27 +++++++++++++++++++++++- build/vignette.rds |binary inst/WORDLIST | 2 + inst/doc/overview_of_vignettes.Rmd | 5 +++- inst/doc/overview_of_vignettes.html | 9 ++++++-- inst/templates/easydashboard.Rmd | 10 --------- man/easystats_citations.Rd |only man/easystats_update.Rd | 6 ++++- man/figures/README-6-1.png |binary man/figures/depnetwork-1.png |binary man/install_latest.Rd | 14 ++++++++---- man/install_suggested.Rd | 13 ++++++------ man/reexports.Rd |only vignettes/overview_of_vignettes.Rmd | 5 +++- 22 files changed, 159 insertions(+), 80 deletions(-)
Title: Statistics for Long-Memory Processes (Book Jan Beran), and
Related Functionality
Description: Datasets and Functionality from
'Jan Beran' (1994). Statistics for Long-Memory Processes; Chapman & Hall.
Estimation of Hurst (and more) parameters for fractional Gaussian noise,
'fARIMA' and 'FEXP' models.
Author: Jan Beran [aut] ,
Martin Maechler [cre, aut] ,
Brandon Whitcher [ctb]
Maintainer: Martin Maechler <maechler@stat.math.ethz.ch>
Diff between longmemo versions 1.1-3 dated 2024-07-30 and 1.1-4 dated 2025-07-11
ChangeLog | 17 +++++ DESCRIPTION | 10 +-- MD5 | 22 ++++--- R/WhittleEst.R | 54 ++++++++++-------- build/vignette.rds |binary inst/doc/BspecFGN.pdf |binary inst/doc/Done |only man/CetaARIMA.Rd | 7 +- man/specARIMA.Rd | 9 ++- man/specFGN.Rd | 8 ++ tests/ceta-ex.R | 50 +++++++++++++---- tests/ceta-ex.Rout.save | 138 +++++++++++++++++++----------------------------- tests/ceta-ex.Rout_noLD |only 13 files changed, 175 insertions(+), 140 deletions(-)
Title: Conditional Method Agreement Trees (COAT)
Description: Agreement of continuously scaled measurements made by two techniques, devices or methods is usually
evaluated by the well-established Bland-Altman analysis or plot. Conditional method agreement trees (COAT),
proposed by Karapetyan, Zeileis, Henriksen, and Hapfelmeier (2025) <doi:10.1093/jrsssc/qlae077>,
embed the Bland-Altman analysis in the framework of recursive partitioning to explore heterogeneous method
agreement in dependence of covariates. COAT can also be used to perform a Bland-Altman test for differences
in method agreement.
Author: Alexander Hapfelmeier [aut, cre] ,
Siranush Karapetyan [aut] ,
Achim Zeileis [aut]
Maintainer: Alexander Hapfelmeier <Alexander.Hapfelmeier@mri.tum.de>
Diff between coat versions 0.2.1 dated 2025-06-27 and 0.2.2 dated 2025-07-11
DESCRIPTION | 10 +++++----- MD5 | 16 ++++++++-------- NEWS.md | 46 +++++++++++++++++++++++++--------------------- R/batest.R | 5 +++++ R/coat.R | 16 ++++++++-------- build/partial.rdb |binary inst/CITATION | 30 ++++++++++++++++-------------- man/batest.Rd | 6 ++++++ man/coat.Rd | 8 ++++---- 9 files changed, 77 insertions(+), 60 deletions(-)
Title: 'HJ-Biplot' using Different Ways of Penalization Plotting with
'ggplot2'
Description: The 'HJ-Biplot' is a multivariate method that represents high-dimensional data in a low-dimensional subspace, capturing most of the information’s variability in just a few dimensions. This package implements three new regularized versions of the HJ-Biplot: Ridge, LASSO, and Elastic Net. These versions introduce restrictions that shrink or zero-out variable weights to improve interpretability based on regularization theory. All methods provide graphical representations using 'ggplot2'.
Author: Mitzi Isabel Cubilla-Montilla [aut, cre],
Carlos Alfredo Torres-Cubilla [aut],
Maria Purificacion Galindo Villardon [aut],
Ana Belen Nieto-Librero [aut]
Maintainer: Mitzi Isabel Cubilla-Montilla <mitzi@usal.es>
Diff between SparseBiplots versions 4.0.2 dated 2025-05-26 and 4.1.1 dated 2025-07-11
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/Plot_Biplot.R | 25 +++++++++++++++++++------ README.md | 3 +++ man/Plot_Biplot.Rd | 7 +++++++ 5 files changed, 36 insertions(+), 13 deletions(-)
Title: A System of Soil Classification for Making and Interpreting Soil
Surveys
Description: Taxonomic dictionaries, formative element lists, and functions related to the maintenance, development and application of U.S. Soil Taxonomy.
Data and functionality are based on official U.S. Department of Agriculture sources including the latest edition of the Keys to Soil Taxonomy. Descriptions and metadata are obtained from the National Soil Information System or Soil Survey Geographic databases. Other sources are referenced in the data documentation.
Provides tools for understanding and interacting with concepts in the U.S. Soil Taxonomic System. Most of the current utilities are for working with taxonomic concepts at the "higher" taxonomic levels: Order, Suborder, Great Group, and Subgroup.
Author: Andrew Brown [aut, cre],
Dylan Beaudette [aut]
Maintainer: Andrew Brown <andrew.g.brown@usda.gov>
Diff between SoilTaxonomy versions 0.2.7 dated 2025-04-05 and 0.2.8 dated 2025-07-11
DESCRIPTION | 9 +++---- MD5 | 42 ++++++++++++++++++------------------ NEWS.md | 4 +++ R/family-classes.R | 6 ----- R/taxonTree.R | 5 +--- README.md | 37 ++++++++++++++++--------------- build/vignette.rds |binary data/ST.rda |binary data/ST_SMR_13th.rda |binary data/ST_criteria_13th.rda |binary data/ST_family_classes.rda |binary data/ST_features.rda |binary data/ST_formative_elements.rda |binary data/ST_higher_taxa_codes_12th.rda |binary data/ST_higher_taxa_codes_13th.rda |binary data/ST_unique_list.rda |binary inst/CITATION | 7 ++---- inst/doc/family-level_taxonomy.html | 34 ++++++++++++++--------------- man/ST_family_classes.Rd | 2 - man/SoilTaxonomy-package.Rd | 1 man/taxonTree.Rd | 4 +-- tests/testthat/test-parseFamily.R | 8 ++++-- 22 files changed, 78 insertions(+), 81 deletions(-)
Title: Interface Between 'GRASS' Geographical Information System and
'R'
Description: An interface between the 'GRASS' geographical information system ('GIS') and 'R', based on starting 'R' from within the 'GRASS' 'GIS' environment, or running a free-standing 'R' session in a temporary 'GRASS' location; the package provides facilities for using all 'GRASS' commands from the 'R' command line. The original interface package for 'GRASS 5' (2000-2010) is described in Bivand (2000) <doi:10.1016/S0098-3004(00)00057-1> and Bivand (2001) <https://www.r-project.org/conferences/DSC-2001/Proceedings/Bivand.pdf>. This was succeeded by 'spgrass6' for 'GRASS 6' (2006-2016) and 'rgrass7' for 'GRASS 7' (2015-present). The 'rgrass' package modernizes the interface for 'GRASS 8' while still permitting the use of 'GRASS 7'.
Author: Roger Bivand [aut] ,
Sebastian Jeworutzki [ctb] ,
Rainer Krug [ctb] ,
Robin Lovelace [ctb] ,
Markus Neteler [ctb] ,
Steven Pawley [cre, aut] ,
Floris Vanderhaeghe [ctb]
Maintainer: Steven Pawley <dr.stevenpawley@gmail.com>
Diff between rgrass versions 0.5-2 dated 2025-02-14 and 0.5-3 dated 2025-07-11
rgrass-0.5-2/rgrass/R/AAA.R |only rgrass-0.5-2/rgrass/inst/etc |only rgrass-0.5-2/rgrass/inst/pre_git_ChangeLog |only rgrass-0.5-3/rgrass/DESCRIPTION | 25 +++++----- rgrass-0.5-3/rgrass/MD5 | 29 +++++------ rgrass-0.5-3/rgrass/NEWS.md | 4 + rgrass-0.5-3/rgrass/R/initGRASS.R | 49 +++++++++++++------- rgrass-0.5-3/rgrass/R/zzz.R |only rgrass-0.5-3/rgrass/build/vignette.rds |binary rgrass-0.5-3/rgrass/inst/doc/coerce.html | 19 +++---- rgrass-0.5-3/rgrass/tests/testthat/helper.R | 45 +++++++++--------- rgrass-0.5-3/rgrass/tests/testthat/test-execGRASS.R | 2 rgrass-0.5-3/rgrass/tests/testthat/test-gmeta.R | 1 rgrass-0.5-3/rgrass/tests/testthat/test-initGRASS.R | 3 + rgrass-0.5-3/rgrass/tests/testthat/test-options.R | 12 ++++ rgrass-0.5-3/rgrass/tests/testthat/test-read_RAST.R | 4 + rgrass-0.5-3/rgrass/tests/testthat/test-read_VECT.R | 3 + 17 files changed, 122 insertions(+), 74 deletions(-)
Title: NASA 'EarthData' Access Utilities
Description: Providing easy, portable access to NASA 'EarthData' products
through the use of bearer tokens. Much of NASA's public data catalogs hosted
and maintained by its 12 Distributed Active Archive Centers ('DAACs') are
now made available on the Amazon Web Services 'S3' storage. However,
accessing this data through the standard 'S3' API is restricted to only to
compute resources running inside 'us-west-2' Data Center in Portland, Oregon,
which allows NASA to avoid being charged data egress rates. This package
provides public access to the data from any networked device by using the
'EarthData' login application programming interface (API),
<https://www.earthdata.nasa.gov/data/earthdata-login>,
providing convenient authentication and access to cloud-hosted NASA 'EarthData'
products. This makes access to a wide range of earth observation data from
any location straight forward and compatible with R packages that are
widely used with cloud native earth observation data (such as 'terra',
's [...truncated...]
Author: Carl Boettiger [aut, cre, cph] ,
Luis Lopez [aut] ,
Yuvi Panda [aut],
Bri Lind [aut] ,
Andy Teucher [ctb] ,
Openscapes [fnd]
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between earthdatalogin versions 0.0.2 dated 2023-12-15 and 0.0.3 dated 2025-07-11
earthdatalogin-0.0.2/earthdatalogin/inst/examples/search.R |only earthdatalogin-0.0.2/earthdatalogin/inst/vignette-sources/img |only earthdatalogin-0.0.2/earthdatalogin/tests/testthat/test-edl_download-alternatives.R |only earthdatalogin-0.0.3/earthdatalogin/DESCRIPTION | 28 + earthdatalogin-0.0.3/earthdatalogin/MD5 | 71 ++-- earthdatalogin-0.0.3/earthdatalogin/NAMESPACE | 7 earthdatalogin-0.0.3/earthdatalogin/NEWS.md | 20 + earthdatalogin-0.0.3/earthdatalogin/R/default_auth.R | 21 - earthdatalogin-0.0.3/earthdatalogin/R/edl_download.R | 30 -- earthdatalogin-0.0.3/earthdatalogin/R/edl_s3_token.R | 128 +++++++- earthdatalogin-0.0.3/earthdatalogin/R/edl_search.R |only earthdatalogin-0.0.3/earthdatalogin/R/edl_set_token.R | 12 earthdatalogin-0.0.3/earthdatalogin/R/list-nasa-stacs.R |only earthdatalogin-0.0.3/earthdatalogin/R/stac-collections_fetch.R |only earthdatalogin-0.0.3/earthdatalogin/README.md | 24 - earthdatalogin-0.0.3/earthdatalogin/build/vignette.rds |binary earthdatalogin-0.0.3/earthdatalogin/inst/WORDLIST | 17 - earthdatalogin-0.0.3/earthdatalogin/inst/doc/data-formats.html | 6 earthdatalogin-0.0.3/earthdatalogin/inst/doc/gdalcubes-stac-cog.Rmd | 129 +++++++- earthdatalogin-0.0.3/earthdatalogin/inst/doc/gdalcubes-stac-cog.html | 149 +++++++--- earthdatalogin-0.0.3/earthdatalogin/inst/doc/legacy-formats.html | 8 earthdatalogin-0.0.3/earthdatalogin/inst/doc/non-egressed.R | 76 ++--- earthdatalogin-0.0.3/earthdatalogin/inst/doc/non-egressed.Rmd | 2 earthdatalogin-0.0.3/earthdatalogin/inst/doc/non-egressed.html | 6 earthdatalogin-0.0.3/earthdatalogin/inst/vignette-sources/gdalcubes-stac-cog-explore.Rmd |only earthdatalogin-0.0.3/earthdatalogin/inst/vignette-sources/gdalcubes-stac-cog.Rmd | 103 +++++- earthdatalogin-0.0.3/earthdatalogin/inst/vignette-sources/legacy-formats.Rmd | 6 earthdatalogin-0.0.3/earthdatalogin/man/collections_fetch.Rd |only earthdatalogin-0.0.3/earthdatalogin/man/edl_download.Rd | 2 earthdatalogin-0.0.3/earthdatalogin/man/edl_extract_urls.Rd |only earthdatalogin-0.0.3/earthdatalogin/man/edl_s3_token.Rd | 44 ++ earthdatalogin-0.0.3/earthdatalogin/man/edl_search.Rd |only earthdatalogin-0.0.3/earthdatalogin/man/get_nasa_stac_url.Rd |only earthdatalogin-0.0.3/earthdatalogin/man/list_nasa_stacs.Rd |only earthdatalogin-0.0.3/earthdatalogin/tests/testthat/test-edl_download.R | 4 earthdatalogin-0.0.3/earthdatalogin/tests/testthat/test-edl_netrc.R | 29 + earthdatalogin-0.0.3/earthdatalogin/tests/testthat/test-edl_s3.R | 4 earthdatalogin-0.0.3/earthdatalogin/tests/testthat/test-edl_search.R |only earthdatalogin-0.0.3/earthdatalogin/tests/testthat/test-list-nasa-stacs.R |only earthdatalogin-0.0.3/earthdatalogin/tests/testthat/test-stac-collections_fetch.R |only earthdatalogin-0.0.3/earthdatalogin/vignettes/gdalcubes-stac-cog.Rmd | 129 +++++++- earthdatalogin-0.0.3/earthdatalogin/vignettes/img/unnamed-chunk-51-1.png |only earthdatalogin-0.0.3/earthdatalogin/vignettes/img/unnamed-chunk-7-1.png |only earthdatalogin-0.0.3/earthdatalogin/vignettes/img/unnamed-chunk-8-1.png |only earthdatalogin-0.0.3/earthdatalogin/vignettes/img/unnamed-chunk-9-1.png |only earthdatalogin-0.0.3/earthdatalogin/vignettes/non-egressed.Rmd | 2 46 files changed, 778 insertions(+), 279 deletions(-)
More information about earthdatalogin at CRAN
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Title: Acceptance Sampling Plans Design
Description: Provides tools for designing and analyzing Acceptance Sampling plans.
Supports both Attributes Sampling (Binomial and Poisson distributions) and
Variables Sampling (Normal and Beta distributions), enabling quality control
for fractional and compositional data. Uses nonlinear programming for sampling
plan optimization, minimizing sample size while controlling producer's and
consumer's risks. Operating Characteristic curves are available for plan visualization.
Author: Ha Truong [aut, cre, cph],
Victor Miranda [ths, rev],
Roger Kissling [ths, rev]
Maintainer: Ha Truong <truongvietha87@gmail.com>
Diff between AccSamplingDesign versions 0.0.4 dated 2025-06-26 and 0.0.5 dated 2025-07-11
AccSamplingDesign-0.0.4/AccSamplingDesign/man/OCdata-accessors.Rd |only AccSamplingDesign-0.0.5/AccSamplingDesign/DESCRIPTION | 6 AccSamplingDesign-0.0.5/AccSamplingDesign/MD5 | 25 AccSamplingDesign-0.0.5/AccSamplingDesign/NAMESPACE | 24 AccSamplingDesign-0.0.5/AccSamplingDesign/R/OCdata.R | 311 ++-------- AccSamplingDesign-0.0.5/AccSamplingDesign/R/manualPlan.R |only AccSamplingDesign-0.0.5/AccSamplingDesign/R/optVarPlan.R | 8 AccSamplingDesign-0.0.5/AccSamplingDesign/R/summary.R | 75 +- AccSamplingDesign-0.0.5/AccSamplingDesign/README.md | 23 AccSamplingDesign-0.0.5/AccSamplingDesign/inst/doc/introduction.R | 36 - AccSamplingDesign-0.0.5/AccSamplingDesign/inst/doc/introduction.Rmd | 36 - AccSamplingDesign-0.0.5/AccSamplingDesign/inst/doc/introduction.html | 252 +++----- AccSamplingDesign-0.0.5/AccSamplingDesign/man/OCdata.Rd | 125 ---- AccSamplingDesign-0.0.5/AccSamplingDesign/man/manualPlan.Rd |only AccSamplingDesign-0.0.5/AccSamplingDesign/vignettes/introduction.Rmd | 36 - 15 files changed, 374 insertions(+), 583 deletions(-)
More information about AccSamplingDesign at CRAN
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