Title: Assessing Package Risk Metrics
Description: A reliable and validated tool that captures detailed risk metrics
such as R 'CMD' check, test coverage, traceability matrix, documentation, dependencies,
reverse dependencies, suggested dependency analysis, repository data,
and enhanced reporting for R packages that are local or stored
on remote repositories such as GitHub, CRAN, and Bioconductor.
Author: Edward Gillian [cre, aut] ,
Hugo Bottois [aut] ,
Paulin Charliquart [aut],
Andre Couturier [aut],
Sanofi [cph, fnd]
Maintainer: Edward Gillian <edward.gillian-ext@sanofi.com>
Diff between risk.assessr versions 2.0.1 dated 2025-08-22 and 3.0.0 dated 2025-11-28
risk.assessr-2.0.1/risk.assessr/R/create_risk_profile.R |only risk.assessr-2.0.1/risk.assessr/R/create_weights_profile.R |only risk.assessr-2.0.1/risk.assessr/R/update_pscore_results.R |only risk.assessr-2.0.1/risk.assessr/R/update_results_doc_scores.R |only risk.assessr-2.0.1/risk.assessr/inst/doc/create-your-weights-profile.R |only risk.assessr-2.0.1/risk.assessr/inst/doc/create-your-weights-profile.Rmd |only risk.assessr-2.0.1/risk.assessr/inst/doc/create-your-weights-profile.html |only risk.assessr-2.0.1/risk.assessr/inst/test-data/haven-2.5.4.tar.gz |only risk.assessr-2.0.1/risk.assessr/man/add_default_risk_weights.Rd |only risk.assessr-2.0.1/risk.assessr/man/assess_dep_for_sigmoid.Rd |only risk.assessr-2.0.1/risk.assessr/man/calc_dependencies.Rd |only risk.assessr-2.0.1/risk.assessr/man/calc_overall_risk_score.Rd |only risk.assessr-2.0.1/risk.assessr/man/calc_reverse_dependencies.Rd |only risk.assessr-2.0.1/risk.assessr/man/calc_risk_profile.Rd |only risk.assessr-2.0.1/risk.assessr/man/check_risk_weights.Rd |only risk.assessr-2.0.1/risk.assessr/man/convert_abbreviation_to_number.Rd |only risk.assessr-2.0.1/risk.assessr/man/create_risk_profile.Rd |only risk.assessr-2.0.1/risk.assessr/man/create_weights_profile.Rd |only risk.assessr-2.0.1/risk.assessr/man/extract_aria_label.Rd |only risk.assessr-2.0.1/risk.assessr/man/figures/01-Version-Control.png |only risk.assessr-2.0.1/risk.assessr/man/figures/02-create-project-as-subdirectory.png |only risk.assessr-2.0.1/risk.assessr/man/get_package_download.Rd |only risk.assessr-2.0.1/risk.assessr/man/get_pkg_creator_info.Rd |only risk.assessr-2.0.1/risk.assessr/man/get_regular_function_body.Rd |only risk.assessr-2.0.1/risk.assessr/man/recalc_risk_scores.Rd |only risk.assessr-2.0.1/risk.assessr/man/score_dependencies.Rd |only risk.assessr-2.0.1/risk.assessr/man/score_reverse_dependencies.Rd |only risk.assessr-2.0.1/risk.assessr/man/standardize_risk_weights.Rd |only risk.assessr-2.0.1/risk.assessr/man/update_pscore_results.Rd |only risk.assessr-2.0.1/risk.assessr/man/update_results_doc_scores.Rd |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_dep_for_sigmoid.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_description_file_elements.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_examples.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_export_help.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_exports.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_news.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_news_current.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_size_codebase.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-assess_vignettes.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-calc_dependencies.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-calc_reverse_dependencies.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-create_risk_profile.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-create_weights_profile.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-doc_riskmetric.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-get_pkg_creator_info.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-get_pkg_desc.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-get_pkg_license.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-parse_dcf_authors_roles.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-recalc_risk_scores.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-score_dependencies.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-update_pscore_results.R |only risk.assessr-2.0.1/risk.assessr/tests/testthat/test-update_results_doc_scores.R |only risk.assessr-2.0.1/risk.assessr/vignettes/create-your-weights-profile.Rmd |only risk.assessr-3.0.0/risk.assessr/DESCRIPTION | 27 risk.assessr-3.0.0/risk.assessr/MD5 | 351 ++- risk.assessr-3.0.0/risk.assessr/NAMESPACE | 59 risk.assessr-3.0.0/risk.assessr/NEWS.md | 56 risk.assessr-3.0.0/risk.assessr/R/assess_pkg.R | 179 + risk.assessr-3.0.0/risk.assessr/R/assess_pkg_r_package.R | 68 risk.assessr-3.0.0/risk.assessr/R/badges.R |only risk.assessr-3.0.0/risk.assessr/R/capture_cran_warning.R |only risk.assessr-3.0.0/risk.assessr/R/check_suggested_exp_funcs.R | 354 --- risk.assessr-3.0.0/risk.assessr/R/core_metrics.R | 72 risk.assessr-3.0.0/risk.assessr/R/create_empty_results.R | 4 risk.assessr-3.0.0/risk.assessr/R/create_traceability_matrix.R | 433 +++- risk.assessr-3.0.0/risk.assessr/R/dependencies.R | 389 ++- risk.assessr-3.0.0/risk.assessr/R/dependency_tree.R |only risk.assessr-3.0.0/risk.assessr/R/documentation_metrics.R | 124 - risk.assessr-3.0.0/risk.assessr/R/extract_thresholds.R |only risk.assessr-3.0.0/risk.assessr/R/generate_html_report.R | 738 +++++-- risk.assessr-3.0.0/risk.assessr/R/generate_traceability_matrix.R |only risk.assessr-3.0.0/risk.assessr/R/get_bioconductor_data.R | 262 +- risk.assessr-3.0.0/risk.assessr/R/get_download.R | 317 ++- risk.assessr-3.0.0/risk.assessr/R/get_exports.R | 797 +++++-- risk.assessr-3.0.0/risk.assessr/R/get_func_descriptions.R | 1 risk.assessr-3.0.0/risk.assessr/R/get_github_data.R | 379 +++ risk.assessr-3.0.0/risk.assessr/R/get_package_host_info.R | 418 ++- risk.assessr-3.0.0/risk.assessr/R/get_pubmed_data.R |only risk.assessr-3.0.0/risk.assessr/R/get_risk_analysis.R |only risk.assessr-3.0.0/risk.assessr/R/get_suggested_exp_funcs.R | 6 risk.assessr-3.0.0/risk.assessr/R/globals.R | 23 risk.assessr-3.0.0/risk.assessr/R/install_package_local.R | 3 risk.assessr-3.0.0/risk.assessr/R/modify_description_file.R | 26 risk.assessr-3.0.0/risk.assessr/R/risk_assess_pkg.R | 18 risk.assessr-3.0.0/risk.assessr/R/unittest_methods.R |only risk.assessr-3.0.0/risk.assessr/R/utils.R | 215 -- risk.assessr-3.0.0/risk.assessr/README.md | 621 ++--- risk.assessr-3.0.0/risk.assessr/build/vignette.rds |binary risk.assessr-3.0.0/risk.assessr/inst/config |only risk.assessr-3.0.0/risk.assessr/inst/doc/How-to-use-risk.assessr.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/How-to-use-risk.assessr.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/How-to-use-risk.assessr.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/Popularity_metric.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/Popularity_metric.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/Popularity_metric.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/Pubmed_data.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/Pubmed_data.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/Pubmed_data.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/Traceability_matrix.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/Traceability_matrix.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/Traceability_matrix.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/define_custom_risk_rules.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/define_custom_risk_rules.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/define_custom_risk_rules.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/dependency_tree.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/dependency_tree.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/dependency_tree.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/examples.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/examples.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/generate_html_report.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/generate_html_report.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/generate_html_report.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/get-available-version.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/get-available-version.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/get-available-version.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/get-package-host.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/get-package-host.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/get-package-host.html |only risk.assessr-3.0.0/risk.assessr/inst/doc/risk.assessr_metric.R |only risk.assessr-3.0.0/risk.assessr/inst/doc/risk.assessr_metric.Rmd |only risk.assessr-3.0.0/risk.assessr/inst/doc/risk.assessr_metric.html |only risk.assessr-3.0.0/risk.assessr/inst/examples |only risk.assessr-3.0.0/risk.assessr/inst/report_templates/risk_report_template.Rmd | 667 +++++- risk.assessr-3.0.0/risk.assessr/inst/test-data/package_test_case.csv | 7 risk.assessr-3.0.0/risk.assessr/inst/test-data/test.package.0010_0.1.0.tar.gz |binary risk.assessr-3.0.0/risk.assessr/inst/test-data/test.package.0011_0.1.0.tar.gz |only risk.assessr-3.0.0/risk.assessr/inst/test-data/test.package.0012_0.1.0.tar.gz |only risk.assessr-3.0.0/risk.assessr/inst/test-data/test.package.0013_0.1.0.tar.gz |only risk.assessr-3.0.0/risk.assessr/man/as_iso_date.Rd |only risk.assessr-3.0.0/risk.assessr/man/assess_pkg_r_package.Rd | 15 risk.assessr-3.0.0/risk.assessr/man/average_issue_close_time.Rd |only risk.assessr-3.0.0/risk.assessr/man/bioconductor_reverse_deps.Rd |only risk.assessr-3.0.0/risk.assessr/man/build_dependency_tree.Rd |only risk.assessr-3.0.0/risk.assessr/man/capture_cran_warning.Rd |only risk.assessr-3.0.0/risk.assessr/man/check_and_fetch_cran_package.Rd | 15 risk.assessr-3.0.0/risk.assessr/man/check_forbidden_notes.Rd |only risk.assessr-3.0.0/risk.assessr/man/check_ggproto.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/check_pkg_tests_and_snaps.Rd |only risk.assessr-3.0.0/risk.assessr/man/classify_function_body.Rd |only risk.assessr-3.0.0/risk.assessr/man/clean_license.Rd |only risk.assessr-3.0.0/risk.assessr/man/clean_up_dependencies.Rd |only risk.assessr-3.0.0/risk.assessr/man/compute_risk.Rd |only risk.assessr-3.0.0/risk.assessr/man/convert_number_to_abbreviation.Rd |only risk.assessr-3.0.0/risk.assessr/man/convert_number_to_percent.Rd |only risk.assessr-3.0.0/risk.assessr/man/count_commits_last_months.Rd |only risk.assessr-3.0.0/risk.assessr/man/cran_packages.Rd |only risk.assessr-3.0.0/risk.assessr/man/cran_revdep.Rd |only risk.assessr-3.0.0/risk.assessr/man/create_traceability_matrix.Rd | 80 risk.assessr-3.0.0/risk.assessr/man/dependsOnPkgs.Rd |only risk.assessr-3.0.0/risk.assessr/man/detect_version_conflicts.Rd |only risk.assessr-3.0.0/risk.assessr/man/download_and_parse_dependencies.Rd |only risk.assessr-3.0.0/risk.assessr/man/expand_dependency_type_spec.Rd |only risk.assessr-3.0.0/risk.assessr/man/extract_dependency_package_names.Rd |only risk.assessr-3.0.0/risk.assessr/man/extract_exported_function_info.Rd |only risk.assessr-3.0.0/risk.assessr/man/extract_ggproto_methods.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/extract_maintainer_info.Rd |only risk.assessr-3.0.0/risk.assessr/man/extract_package_version.Rd |only risk.assessr-3.0.0/risk.assessr/man/extract_risk_inputs.Rd |only risk.assessr-3.0.0/risk.assessr/man/extract_thresholds_by_id.Rd |only risk.assessr-3.0.0/risk.assessr/man/extract_thresholds_by_key.Rd |only risk.assessr-3.0.0/risk.assessr/man/fetch_all_dependencies.Rd |only risk.assessr-3.0.0/risk.assessr/man/fetch_bioconductor_package_info.Rd | 4 risk.assessr-3.0.0/risk.assessr/man/filter_symbol_functions.Rd | 6 risk.assessr-3.0.0/risk.assessr/man/fine_grained_tms.Rd |only risk.assessr-3.0.0/risk.assessr/man/function_is_ggproto.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/generate_fg_trace_matrix_section.Rd |only risk.assessr-3.0.0/risk.assessr/man/generate_html_report.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/generate_pop_metrics_section.Rd |only risk.assessr-3.0.0/risk.assessr/man/generate_trace_matrix_section.Rd | 8 risk.assessr-3.0.0/risk.assessr/man/generate_traceability_matrix.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_all_s4_methods.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_bioconductor_package_url.Rd | 17 risk.assessr-3.0.0/risk.assessr/man/get_commits_since.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_cran_package_url.Rd | 26 risk.assessr-3.0.0/risk.assessr/man/get_cran_total_downloads.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_dependencies.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_exports.Rd | 25 risk.assessr-3.0.0/risk.assessr/man/get_github_data.Rd | 22 risk.assessr-3.0.0/risk.assessr/man/get_host_package.Rd | 7 risk.assessr-3.0.0/risk.assessr/man/get_internal_package_url.Rd | 23 risk.assessr-3.0.0/risk.assessr/man/get_license_thresholds.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_max_thresholds.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_package_download_bioconductor.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_package_download_cran.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_pubmed_by_year.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_pubmed_count.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_r6_methods_details.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_reverse_dependencies.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_risk_analysis.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_risk_definition.Rd |only risk.assessr-3.0.0/risk.assessr/man/get_s3_method.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/get_toplevel_assignments.Rd | 14 risk.assessr-3.0.0/risk.assessr/man/get_versions.Rd | 28 risk.assessr-3.0.0/risk.assessr/man/handle_null.Rd |only risk.assessr-3.0.0/risk.assessr/man/install_package_local.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/is_base.Rd |only risk.assessr-3.0.0/risk.assessr/man/list_badges.Rd |only risk.assessr-3.0.0/risk.assessr/man/map_functions_to_docs.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/map_functions_to_scripts.Rd | 8 risk.assessr-3.0.0/risk.assessr/man/modify_description_file.Rd | 1 risk.assessr-3.0.0/risk.assessr/man/normalize_data.Rd |only risk.assessr-3.0.0/risk.assessr/man/parse_bioconductor_releases.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/parse_dcf_dependencies_version.Rd |only risk.assessr-3.0.0/risk.assessr/man/parse_html_version.Rd | 4 risk.assessr-3.0.0/risk.assessr/man/parse_package_info.Rd | 4 risk.assessr-3.0.0/risk.assessr/man/preprocess_func_full_name.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/print_tree.Rd |only risk.assessr-3.0.0/risk.assessr/man/risk.assessr-package.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/risk_assess_pkg.Rd | 2 risk.assessr-3.0.0/risk.assessr/man/run_rcmdcheck.Rd | 7 risk.assessr-3.0.0/risk.assessr/man/safe_value.Rd |only risk.assessr-3.0.0/risk.assessr/tests/testthat.R | 2 risk.assessr-3.0.0/risk.assessr/tests/testthat/_snaps |only risk.assessr-3.0.0/risk.assessr/tests/testthat/setup.R | 26 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-assess_pkg.R | 815 +++++-- risk.assessr-3.0.0/risk.assessr/tests/testthat/test-assess_pkg_r_package.R | 109 - risk.assessr-3.0.0/risk.assessr/tests/testthat/test-badges.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-bioconductor_reverse_deps.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-capture_cran_warning.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-check_forbidden_notes.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-check_suggested_exp_funcs.R | 438 ---- risk.assessr-3.0.0/risk.assessr/tests/testthat/test-clean_up_dependencies.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-contains_r_folder.R | 16 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-contains_vignette_folder.R | 4 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-cran_packages.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-cran_revdep.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-create_empty_results.R | 2 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-create_traceability_matrix.R | 522 ++++ risk.assessr-3.0.0/risk.assessr/tests/testthat/test-dependency_tree.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-dependsOnPkgs.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-documentation_metrics.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-expand_dependency_type_spec.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-extract_dependency_package_names.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-extract_thresholds.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-generate_html_report.R | 273 +- risk.assessr-3.0.0/risk.assessr/tests/testthat/test-generate_traceability_matrix.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_bioconductor_data.R | 76 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_download.R | 399 +++ risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_exports.R | 1046 +++++++--- risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_github_data.R | 400 +++ risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_package_host_info.R | 876 +++++--- risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_pubmed_data.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_risk_analysis.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-get_toplevel_assignments.R | 1 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-install_package_local.R | 5 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-map_functions_to_scripts.R | 1 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-modify_description_file.R | 57 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-parse_dcf_dependencies.R | 51 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-reverse_dependencies.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-risk_assess_pkg.R | 168 - risk.assessr-3.0.0/risk.assessr/tests/testthat/test-run_coverage.R | 19 risk.assessr-3.0.0/risk.assessr/tests/testthat/test-run_rcmdcheck.R | 166 + risk.assessr-3.0.0/risk.assessr/tests/testthat/test-set_up_pkg.R | 171 + risk.assessr-3.0.0/risk.assessr/tests/testthat/test-unittest_methods.R |only risk.assessr-3.0.0/risk.assessr/tests/testthat/test-utils.R | 140 - risk.assessr-3.0.0/risk.assessr/vignettes/How-to-use-risk.assessr.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/Popularity_metric.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/Pubmed_data.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/Traceability_matrix.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/assets |only risk.assessr-3.0.0/risk.assessr/vignettes/define_custom_risk_rules.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/dependency_tree.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/examples.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/generate_html_report.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/get-available-version.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/get-package-host.Rmd |only risk.assessr-3.0.0/risk.assessr/vignettes/risk.assessr_metric.Rmd |only 267 files changed, 8712 insertions(+), 4021 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-05-23 2.0.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-11-23 5.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-06-14 0.3-1
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2023-04-09 0.2.1
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2024-05-07 1.2.0
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2024-01-08 1.0.2
2022-09-10 1.0.1
2021-08-23 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-06-13 1.0
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2024-01-22 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-04-16 1.0.0
2024-03-26 0.9.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-04-23 0.0.12
2019-07-04 0.0.11
2014-11-09 0.0-7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-03-25 2.1-12
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-10-11 1.8.0
2020-06-16 1.6.0
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2015-11-21 1.4
2014-09-17 1.2
2014-03-28 1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-05-27 0.1.8
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2024-01-31 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-08 1.0.0
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2024-04-04 0.2.0
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2025-01-14 0.4.1
2025-01-12 0.4.0
2023-07-04 0.3.0
2023-05-25 0.2.2
2023-05-19 0.2.1
2023-05-18 0.2.0
2022-05-10 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
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2022-03-14 1.1
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Previous versions (as known to CRANberries) which should be available via the Archive link are:
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Title: Simple Features for R
Description: Support for simple feature access, a standardized way to
encode and analyze spatial vector data. Binds to 'GDAL'
<doi:10.5281/zenodo.5884351> for reading and writing data, to 'GEOS'
<doi:10.5281/zenodo.11396894> for geometrical operations,
and to 'PROJ' <doi:10.5281/zenodo.5884394> for projection
conversions and datum transformations. Uses by default the 's2'
package for geometry operations on geodetic (long/lat degree)
coordinates.
Author: Edzer Pebesma [aut, cre] ,
Roger Bivand [ctb] ,
Etienne Racine [ctb],
Michael Sumner [ctb],
Ian Cook [ctb],
Tim Keitt [ctb],
Robin Lovelace [ctb],
Hadley Wickham [ctb],
Jeroen Ooms [ctb] ,
Kirill Mueller [ctb],
Thomas Lin Pedersen [ctb],
Dan Baston [c [...truncated...]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sf versions 1.0-22 dated 2025-11-10 and 1.0-23 dated 2025-11-28
DESCRIPTION | 6 +++--- MD5 | 28 ++++++++++++++-------------- NEWS.md | 6 ++++++ R/read.R | 4 ++-- R/sf.R | 18 +++++++++++------- inst/doc/sf1.html | 8 ++++---- inst/doc/sf2.html | 6 +++--- inst/doc/sf4.html | 2 +- inst/doc/sf7.html | 10 +++++----- inst/docker/gdal/Dockerfile | 13 ++++++++++++- man/st_read.Rd | 4 ++-- src/gdal_utils.cpp | 2 +- tests/sfc.Rout.save | 12 ++++-------- tests/stars.R | 20 ++++++++++++++++---- tests/stars.Rout.save | 31 ++++++++++++++++++++++--------- 15 files changed, 106 insertions(+), 64 deletions(-)
Title: Read Data Stored in 'DBC' (Compressed 'DBF') Files
Description: Functions for reading and decompressing the 'DBC' (compressed 'DBF') files. Please note that this is the file format used by the Brazilian Ministry of Health ('DATASUS') to publish healthcare datasets. It is not related to the 'FoxPro' or 'CANdb' 'DBC' file formats.
Author: Daniela Petruzalek [aut, cre, cph],
Mark Adler [cph, ctb],
Pablo Marcondes Fonseca [cph, ctb]
Maintainer: Daniela Petruzalek <daniela.petruzalek@gmail.com>
This is a re-admission after prior archival of version 1.0.7 dated 2024-05-08
Diff between read.dbc versions 1.0.7 dated 2024-05-08 and 1.2.0 dated 2025-11-28
DESCRIPTION | 21 +++++---- MD5 | 37 ++++++++++------ NAMESPACE | 2 NEWS.md | 17 +++++++ R/dbc2dbf.R | 22 +++++++-- R/dbf2dbc.R |only R/read.dbc.R | 23 +++++----- README.md | 2 inst/CHANGELOG.md | 19 ++++++++ man/dbc2dbf.Rd | 2 man/dbf2dbc.Rd |only man/read.dbc.Rd | 4 - src/blast.c | 119 ++++++++++++++++++++++++++++------------------------ src/blast.h | 7 +-- src/dbc2dbf.c | 102 ++++++++++++++++++++++++++++++++++---------- src/dbf2dbc.c |only src/implode.c |only src/implode.h |only src/read_dbc_init.c | 20 +++++++- tests |only 20 files changed, 274 insertions(+), 123 deletions(-)
Title: Subset- And Name-Aware Array Utility Functions
Description: Stacking arrays according to dimension names, subset-aware
splitting and mapping of functions, intersecting along arbitrary
dimensions, converting to and from data.frames, and many other helper
functions.
Author: Michael Schubert [aut, cre, cph]
Maintainer: Michael Schubert <mschu.dev@gmail.com>
Diff between narray versions 0.5.1 dated 2022-10-02 and 0.5.2 dated 2025-11-28
narray-0.5.1/narray/R/stack_old.r |only narray-0.5.2/narray/DESCRIPTION | 16 +- narray-0.5.2/narray/MD5 | 13 +- narray-0.5.2/narray/NEWS.md | 5 narray-0.5.2/narray/build/vignette.rds |binary narray-0.5.2/narray/inst/doc/narray.R | 6 - narray-0.5.2/narray/inst/doc/narray.html | 175 +++++++++++++++---------------- narray-0.5.2/narray/src/stack.cpp | 42 +++---- 8 files changed, 124 insertions(+), 133 deletions(-)
Title: Kaplan-Meier Plot with 'ggplot2'
Description: The function 'jskm()' creates publication quality Kaplan-Meier plot with at risk tables below. 'svyjskm()' provides plot for weighted Kaplan-Meier estimator.
Author: Jinseob Kim [aut, cre] ,
yoonkyoung Chun [aut],
Zarathu [cph, fnd],
sungho Choi [aut],
Mingu Jee [aut],
Wonbin Hahn [aut]
Maintainer: Jinseob Kim <jinseob2kim@gmail.com>
Diff between jskm versions 0.5.21 dated 2025-10-24 and 0.5.22 dated 2025-11-28
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS.md | 3 +++ R/jskm.R | 9 +++++++-- R/svyjskm.R | 19 ++++++++++++++----- inst/doc/jskm.html | 4 ++-- man/jskm.Rd | 3 +++ man/svyjskm.Rd | 3 +++ 8 files changed, 43 insertions(+), 20 deletions(-)
Title: Analyse Biological Invasion Costs with the 'InvaCost' Database
Description: Provides an up-to-date version of the 'InvaCost' database
(<doi:10.6084/m9.figshare.12668570>) in R, and
several functions to analyse the costs of invasive alien species
(<doi:10.1111/2041-210X.13929>).
Author: Boris Leroy [cre, aut],
Andrew Kramer [aut],
Anne-Charlotte Vaissiere [ctb],
Christophe Diagne [ctb]
Maintainer: Boris Leroy <leroy.boris@gmail.com>
Diff between invacost versions 1.1-6 dated 2024-02-11 and 1.1-7 dated 2025-11-28
DESCRIPTION | 28 +++++++++++++++++++++------ MD5 | 6 ++--- R/getInvaCostVersion.R | 50 +++++++++++++++++++++++++++++++------------------ build/partial.rdb |binary 4 files changed, 57 insertions(+), 27 deletions(-)
Title: Algorithms for Routing and Solving the Traffic Assignment
Problem
Description: Calculation of distances, shortest paths and isochrones on weighted graphs using several variants of Dijkstra algorithm.
Proposed algorithms are unidirectional Dijkstra (Dijkstra, E. W. (1959) <doi:10.1007/BF01386390>),
bidirectional Dijkstra (Goldberg, Andrew & Fonseca F. Werneck, Renato (2005) <https://www.cs.princeton.edu/courses/archive/spr06/cos423/Handouts/EPP%20shortest%20path%20algorithms.pdf>),
A* search (P. E. Hart, N. J. Nilsson et B. Raphael (1968) <doi:10.1109/TSSC.1968.300136>),
new bidirectional A* (Pijls & Post (2009) <https://repub.eur.nl/pub/16100/ei2009-10.pdf>),
Contraction hierarchies (R. Geisberger, P. Sanders, D. Schultes and D. Delling (2008) <doi:10.1007/978-3-540-68552-4_24>),
PHAST (D. Delling, A.Goldberg, A. Nowatzyk, R. Werneck (2011) <doi:10.1016/j.jpdc.2012.02.007>).
Algorithms for solving the traffic assignment problem are All-or-Nothing assignment,
Method of Successive Averages,
Frank-Wolfe algorithm (M. Fukus [...truncated...]
Author: Vincent Larmet [aut, cre]
Maintainer: Vincent Larmet <larmet.vincent@gmail.com>
Diff between cppRouting versions 3.1 dated 2022-12-01 and 3.2 dated 2025-11-28
DESCRIPTION | 17 - MD5 | 28 +- NEWS.md | 123 +++++---- R/RcppExports.R | 150 ++++++------ build/vignette.rds |binary inst/doc/cppRouting.R | 12 inst/doc/cppRouting.html | 586 ++++++++++++++++++++++++++++++++++------------- src/Makevars | 1 src/Makevars.win | 1 src/distance_mat.cpp | 2 src/distance_pair.cpp | 2 src/graph.h | 2 src/path_mat.cpp | 2 src/path_pair.cpp | 2 src/wrapper.cpp | 28 +- 15 files changed, 612 insertions(+), 344 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-07 2.3
2022-09-07 2.2
2022-04-06 2.1
2021-04-02 2.0
2021-02-04 1.7
2021-01-10 1.6
2020-12-16 1.5
2020-11-01 1.4.3
2020-09-01 1.4.2
2020-08-02 1.4.1
2020-06-26 1.4
2020-04-26 1.3.3
2020-03-16 1.3.2
2020-01-23 1.3.1
2019-12-09 1.3
2018-11-06 1.1
2018-04-08 1.0-9
2014-01-14 1.0-8
2011-12-27 1.0-7
2010-10-01 1.0-6
2010-09-21 1.0-5
2009-02-15 1.0-4
2007-07-18 1.0-3
2005-10-20 1.0-2
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2024-02-05 1.0.1
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2025-06-03 3.0
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2023-09-28 0.2.0
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2025-06-04 0.5
2023-07-06 0.4
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2024-04-01 0.1.7
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2019-05-09 0.1.3
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2023-10-27 1.7.5
2023-05-26 1.7.4
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2021-05-13 1.7.2
2021-02-18 1.7.1
2019-09-03 1.7.0
2019-06-20 1.5.0
2019-02-21 1.1.0
2018-10-30 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
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Previous versions (as known to CRANberries) which should be available via the Archive link are:
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2024-04-20 0.9.0.1
2019-05-05 0.9.0
2018-03-18 0.7.7
2017-10-20 0.7.6
2016-09-02 0.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-02-27 1.0.13
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2022-10-10 0.2.3
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2022-05-17 0.2.1
2021-12-15 0.1.1
2021-12-01 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-10-28 0.1.2
Title: Rearrangement Distances Between Unrooted Phylogenetic Trees
Description: Fast calculation of the Subtree Prune and Regraft (SPR),
Tree Bisection and Reconnection (TBR) and Replug distances between
unrooted trees, using the algorithms of Whidden and
Matsen (2017) <doi:10.48550/arXiv.1511.07529>.
Author: Martin R. Smith [aut, cre, cph] ,
Chris Whidden [cph]
Maintainer: Martin R. Smith <martin.smith@durham.ac.uk>
Diff between TBRDist versions 1.0.2 dated 2020-09-17 and 1.0.3 dated 2025-11-28
DESCRIPTION | 18 - MD5 | 20 +- NEWS.md | 4 build/vignette.rds |binary inst/CITATION | 10 - inst/doc/TBRDist.R | 2 inst/doc/TBRDist.html | 191 ++++++++++++-------- man/TreeRearrangementDistances.Rd | 348 +++++++++++++++++++------------------- man/dot-PrepareTrees.Rd | 64 +++--- man/internals.Rd | 86 ++++----- src/RcppExports.cpp | 5 11 files changed, 398 insertions(+), 350 deletions(-)
Title: Facilities for Simulating from ODE-Based Models
Description: Facilities for running simulations from ordinary
differential equation ('ODE') models, such as pharmacometrics and other
compartmental models. A compilation manager translates the ODE model
into C, compiles it, and dynamically loads the object code into R for
improved computational efficiency. An event table object facilitates
the specification of complex dosing regimens (optional) and sampling
schedules. NB: The use of this package requires both C and
Fortran compilers, for details on their use with R please see
Section 6.3, Appendix A, and Appendix D in the "R Administration and
Installation" manual. Also the code is mostly released under GPL. The
'VODE' and 'LSODA' are in the public domain. The information is available
in the inst/COPYRIGHTS.
Author: Matthew L. Fidler [aut, cre] ,
Wenping Wang [aut],
Alan Hindmarsh [ctb],
Arun Srinivasan [ctb],
Awad H. Al-Mohy [ctb],
Bill Denney [ctb] ,
Cleve Moler [ctb],
David Cooley [ctb],
Drew Schmidt [ctb],
Ernst Hairer [ctb],
Gabriel Staples [ctb],
Gerhard W [...truncated...]
Maintainer: Matthew L. Fidler <matthew.fidler@gmail.com>
Diff between rxode2 versions 4.1.1 dated 2025-10-08 and 5.0.0 dated 2025-11-28
rxode2-4.1.1/rxode2/tests/testthat/433.qs |only rxode2-4.1.1/rxode2/tests/testthat/etTrans-drop.qs |only rxode2-4.1.1/rxode2/tests/testthat/etTrans1.qs |only rxode2-4.1.1/rxode2/tests/testthat/keep-756.qs |only rxode2-4.1.1/rxode2/tests/testthat/lincmt-solve-focei-sol.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-data-setup.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-etTrans-1.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-etTrans-780.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-example-3-1.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-infusion-bolus.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-issue-393.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-issue-398.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-issue-430.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-issue-468.qs |only rxode2-4.1.1/rxode2/tests/testthat/test-nmtest.qs |only rxode2-5.0.0/rxode2/DESCRIPTION | 15 rxode2-5.0.0/rxode2/MD5 | 148 +-- rxode2-5.0.0/rxode2/NAMESPACE | 4 rxode2-5.0.0/rxode2/NEWS.md | 20 rxode2-5.0.0/rxode2/R/asModel.R | 9 rxode2-5.0.0/rxode2/R/mlogit.R | 13 rxode2-5.0.0/rxode2/R/piping.R | 6 rxode2-5.0.0/rxode2/R/rxUiGet.R | 2 rxode2-5.0.0/rxode2/R/rxode2.R | 58 - rxode2-5.0.0/rxode2/R/rxode2_md5.R | 2 rxode2-5.0.0/rxode2/R/rxsolve.R | 2 rxode2-5.0.0/rxode2/R/tran.R | 2 rxode2-5.0.0/rxode2/R/ui-assign-parts.R | 2 rxode2-5.0.0/rxode2/R/ui-getControl.R | 4 rxode2-5.0.0/rxode2/R/ui-rename.R | 4 rxode2-5.0.0/rxode2/R/ui.R | 18 rxode2-5.0.0/rxode2/build/linCmtTest.R | 4 rxode2-5.0.0/rxode2/build/partial.rdb |binary rxode2-5.0.0/rxode2/build/vignette.rds |binary rxode2-5.0.0/rxode2/inst/doc/rxode2-syntax.html | 26 rxode2-5.0.0/rxode2/inst/include/rxode2_model_shared.c | 66 + rxode2-5.0.0/rxode2/inst/include/rxode2parseStruct.h | 1 rxode2-5.0.0/rxode2/inst/include/rxode2parseVer.h | 4 rxode2-5.0.0/rxode2/inst/include/rxode2parse_control.h | 3 rxode2-5.0.0/rxode2/man/as.model.Rd | 4 rxode2-5.0.0/rxode2/man/mexpit.Rd | 9 rxode2-5.0.0/rxode2/man/rxLastCompile.Rd |only rxode2-5.0.0/rxode2/man/stat_amt.Rd | 6 rxode2-5.0.0/rxode2/man/stat_cens.Rd | 6 rxode2-5.0.0/rxode2/src/codegen2.h | 66 + rxode2-5.0.0/rxode2/src/etTran.cpp | 343 +++++-- rxode2-5.0.0/rxode2/src/genModelVars.c | 1 rxode2-5.0.0/rxode2/src/genModelVars.h | 6 rxode2-5.0.0/rxode2/src/init.c | 2 rxode2-5.0.0/rxode2/src/mlogit.c | 26 rxode2-5.0.0/rxode2/src/par_solve.h | 6 rxode2-5.0.0/rxode2/src/print_node.h | 2 rxode2-5.0.0/rxode2/src/qs.cpp | 10 rxode2-5.0.0/rxode2/src/rxData.cpp | 176 +-- rxode2-5.0.0/rxode2/tests/testthat/433.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/etTrans-drop.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/etTrans1.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/keep-756.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/lincmt-solve-focei-sol.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-alag.R | 6 rxode2-5.0.0/rxode2/tests/testthat/test-cbind-study-individual.R | 6 rxode2-5.0.0/rxode2/tests/testthat/test-convertId.R | 3 rxode2-5.0.0/rxode2/tests/testthat/test-data-setup.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-data-table.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-etTrans-1.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-etTrans-780.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-etTrans.R | 14 rxode2-5.0.0/rxode2/tests/testthat/test-example-3-1.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-example-3-1.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-infusion-bolus.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-infusion-bolus.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-issue-393.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-issue-398.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-issue-430.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-issue-468.qs2 |only rxode2-5.0.0/rxode2/tests/testthat/test-keep.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-lincmt-solve.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-mix.R | 112 ++ rxode2-5.0.0/rxode2/tests/testthat/test-mlogit.R | 14 rxode2-5.0.0/rxode2/tests/testthat/test-nmtest.R | 6 rxode2-5.0.0/rxode2/tests/testthat/test-nodup-keep.R | 2 rxode2-5.0.0/rxode2/tests/testthat/test-par-solve.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-rxIs.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-rxode-issue-393.R | 28 rxode2-5.0.0/rxode2/tests/testthat/test-rxode-issue-398.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-rxode-issue-430.R | 14 rxode2-5.0.0/rxode2/tests/testthat/test-rxode-issue-433.R | 4 rxode2-5.0.0/rxode2/tests/testthat/test-rxode-issue-468.R | 2 rxode2-5.0.0/rxode2/tests/testthat/test-ui-piping.R | 133 +- rxode2-5.0.0/rxode2/tests/testthat/test-zzzz-plot.R | 465 +++++++--- 90 files changed, 1304 insertions(+), 613 deletions(-)
Title: The Flexible Spatial Scan Statistic
Description: Provides functions for detecting spatial clusters using the flexible
spatial scan statistic developed by Tango and Takahashi (2005) <doi:10.1186/1476-072X-4-11>.
This package implements a wrapper for the 'C' routine used in the 'FleXScan' 3.1.2
<https://sites.google.com/site/flexscansoftware/home> developed by Takahashi,
Yokoyama, and Tango. For details, see Otani et al. (2021) <doi:10.18637/jss.v099.i13>.
Author: Takahiro Otani [aut, cre],
Kunihiko Takahashi [aut]
Maintainer: Takahiro Otani <t.otani@aichi-cc.jp>
This is a re-admission after prior archival of version 1.1.0 dated 2023-03-01
Diff between rflexscan versions 1.1.0 dated 2023-03-01 and 1.2.0 dated 2025-11-28
DESCRIPTION | 29 +++++++++++++++--------- MD5 | 30 ++++++++++++------------- NEWS.md | 7 +++++ R/RcppExports.R | 3 ++ R/flexscan.R | 48 +++++++++++++++++++++++++++++++++++------ inst/CITATION | 34 ++++++++++++++--------------- man/choropleth.Rd | 6 ++++- man/plot.rflexscan.Rd | 6 ++++- man/print.rflexscan.Rd | 4 +++ man/print.rflexscanCluster.Rd | 5 ++++ man/print.summary.rflexscan.Rd | 5 ++++ man/rflexscan-package.Rd | 9 +++++++ man/rflexscan.Rd | 5 +++- man/runFleXScan.Rd | 3 ++ man/summary.rflexscan.Rd | 5 ++++ src/flscan312.cpp | 38 ++++++++++++++++++++++++++++---- 16 files changed, 178 insertions(+), 59 deletions(-)
Title: GCC Estimation of the Multilevel Factor Model
Description: Provides methods for model selection, estimation, inference, and simulation for the
multilevel factor model, based on the principal component estimation and generalised
canonical correlation approach. Details can be found in "Generalised Canonical Correlation
Estimation of the Multilevel Factor Model." Lin and Shin (2025) <doi:10.2139/ssrn.4295429>.
Author: Rui Lin [aut, cre],
Yongcheol Shin [aut]
Maintainer: Rui Lin <ruilin1081@gmail.com>
Diff between GCCfactor versions 1.1.1 dated 2025-09-12 and 1.1.2 dated 2025-11-28
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NAMESPACE | 1 - R/utility_functions.R | 2 +- 4 files changed, 7 insertions(+), 8 deletions(-)
Title: Design and Analysis for Factorial Experiments
Description: Provides design-based and model-based estimators for the population average marginal component effects in general factorial experiments, including conjoint analysis. The package also implements a series of recommendations offered in de la Cuesta, Egami, and Imai (2022) <doi:10.1017/pan.2020.40>, and Egami and Imai (2019) <doi:10.1080/01621459.2018.1476246>.
Author: Naoki Egami [aut, cre],
Brandon de la Cuesta [aut],
Kosuke Imai [aut]
Maintainer: Naoki Egami <naoki.egami5@gmail.com>
This is a re-admission after prior archival of version 1.0.1 dated 2020-05-11
Diff between factorEx versions 1.0.1 dated 2020-05-11 and 1.1.0 dated 2025-11-28
factorEx-1.0.1/factorEx/R/factorEx-package.R |only factorEx-1.0.1/factorEx/man/factorEx-package.Rd |only factorEx-1.1.0/factorEx/DESCRIPTION | 25 ++++++++++++--- factorEx-1.1.0/factorEx/MD5 | 38 +++++++++++------------- factorEx-1.1.0/factorEx/R/AME_fit_basic.R | 2 - factorEx-1.1.0/factorEx/R/decompose_pAMCE.R | 1 factorEx-1.1.0/factorEx/R/design_pAMCE.R | 6 +-- factorEx-1.1.0/factorEx/R/diagnose_pAMCE.R | 2 + factorEx-1.1.0/factorEx/R/model_pAMCE.R | 26 +++++++--------- factorEx-1.1.0/factorEx/R/plot_pAMCE.R | 1 factorEx-1.1.0/factorEx/R/summary_pAMCE.R | 1 factorEx-1.1.0/factorEx/R/weights_pAMCE.R | 7 ++-- factorEx-1.1.0/factorEx/man/OnoBurden.Rd | 4 +- factorEx-1.1.0/factorEx/man/design_pAMCE.Rd | 6 +-- factorEx-1.1.0/factorEx/man/diagnose_pAMCE.Rd | 3 + factorEx-1.1.0/factorEx/man/model_pAMCE.Rd | 24 ++++++--------- factorEx-1.1.0/factorEx/man/plot.pAMCE.Rd | 3 + factorEx-1.1.0/factorEx/man/plot_decompose.Rd | 3 + factorEx-1.1.0/factorEx/man/plot_diagnose.Rd | 3 + factorEx-1.1.0/factorEx/man/summary.pAMCE.Rd | 3 + factorEx-1.1.0/factorEx/man/weights_pAMCE.Rd | 3 + 21 files changed, 97 insertions(+), 64 deletions(-)
Title: Ecological Limit Function Model Generation and Analysis Toolkit
Description: A toolset for generating Ecological Limit Function (ELF) models and evaluating potential species loss resulting from flow change, based on the 'elfgen' framework. ELFs describe the relation between aquatic species richness (fish or benthic macroinvertebrates) and stream size characteristics (streamflow or drainage area). Journal publications are available outlining framework methodology (Kleiner et al. (2020) <doi:10.1111/1752-1688.12876>) and application (Rapp et al. (2020) <doi:10.1111/1752-1688.12877>).
Author: Joseph Kleiner [aut] ,
Robert Burgholzer [ctb] ,
Connor Brogan [cre]
Maintainer: Connor Brogan <connor.brogan@deq.virginia.gov>
This is a re-admission after prior archival of version 2.3.3 dated 2022-08-23
Diff between elfgen versions 2.3.3 dated 2022-08-23 and 2.3.4 dated 2025-11-28
DESCRIPTION | 35 +++++-- MD5 | 33 +++--- NEWS.md |only R/bkpt-pwit.R | 3 R/bkpt-ymax.R | 3 R/elfchange.R | 3 R/elfdata.R | 192 +++++++++++++++++++++++++--------------- R/elfgen.R | 27 ++++- R/richness-change.R | 3 README.md | 6 - man/bkpt_pwit.Rd | 3 man/bkpt_ymax.Rd | 3 man/elfchange.Rd | 3 man/elfdata.Rd | 33 +++++- man/elfgen.Rd | 14 ++ man/richness_change.Rd | 3 tests/testthat/test-elfchange.R | 16 +-- tests/testthat/test-elfdata.R | 10 +- 18 files changed, 259 insertions(+), 131 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-01-23 0.1.5.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-09-13 1.0.1
2018-08-31 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-06-12 1.23.0
2023-08-30 1.22.6
2022-12-02 1.22.5
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-15 0.8.0
Title: Inferring Latent Diffusion Networks
Description: This is an R implementation of the netinf algorithm (Gomez Rodriguez, Leskovec, and Krause, 2010)<doi:10.1145/1835804.1835933>. Given a set of events that spread between a set of nodes the algorithm infers the most likely stable diffusion network that is underlying the diffusion process.
Author: Fridolin Linder [aut, cre],
Bruce Desmarais [ctb]
Maintainer: Fridolin Linder <fridolin.linder@gmail.com>
Diff between NetworkInference versions 1.2.4 dated 2019-02-28 and 1.2.5 dated 2025-11-28
NetworkInference-1.2.4/NetworkInference/vignettes/readme.html |only NetworkInference-1.2.5/NetworkInference/DESCRIPTION | 9 NetworkInference-1.2.5/NetworkInference/MD5 | 22 NetworkInference-1.2.5/NetworkInference/NEWS.md | 13 NetworkInference-1.2.5/NetworkInference/R/zzz.R | 2 NetworkInference-1.2.5/NetworkInference/build/partial.rdb |only NetworkInference-1.2.5/NetworkInference/build/vignette.rds |binary NetworkInference-1.2.5/NetworkInference/inst/CITATION | 82 - NetworkInference-1.2.5/NetworkInference/inst/doc/quickstart_vignette.R | 20 NetworkInference-1.2.5/NetworkInference/inst/doc/quickstart_vignette.html | 271 ++- NetworkInference-1.2.5/NetworkInference/inst/doc/tutorial_vignette.R | 86 - NetworkInference-1.2.5/NetworkInference/inst/doc/tutorial_vignette.html | 727 ++++++---- NetworkInference-1.2.5/NetworkInference/man/policies.Rd | 2 13 files changed, 737 insertions(+), 497 deletions(-)
More information about NetworkInference at CRAN
Permanent link
Title: Zero-Truncated Poisson Lognormal Distribution
Description: Functions for obtaining the density, random variates
and maximum likelihood estimates of the Zero-truncated Poisson lognormal
distribution and their mixture distribution.
Author: Masatoshi Katabuchi [aut, cre, cph]
Maintainer: Masatoshi Katabuchi <mattocci27@gmail.com>
Diff between ztpln versions 0.1.2 dated 2021-10-09 and 0.1.3 dated 2025-11-28
ztpln-0.1.2/ztpln/R/dztpln.r |only ztpln-0.1.2/ztpln/R/dztplnm.r |only ztpln-0.1.2/ztpln/R/ztpln.r |only ztpln-0.1.2/ztpln/R/ztplnMLE.r |only ztpln-0.1.2/ztpln/R/ztplnmMLE.r |only ztpln-0.1.2/ztpln/inst/doc/ztpln.rmd |only ztpln-0.1.2/ztpln/tests/testthat/test_ztpln.r |only ztpln-0.1.2/ztpln/vignettes/ztpln.rmd |only ztpln-0.1.3/ztpln/DESCRIPTION | 20 ztpln-0.1.3/ztpln/MD5 | 38 - ztpln-0.1.3/ztpln/R/dztpln.R |only ztpln-0.1.3/ztpln/R/dztplnm.R |only ztpln-0.1.3/ztpln/R/ztpln.R |only ztpln-0.1.3/ztpln/R/ztplnMLE.R |only ztpln-0.1.3/ztpln/R/ztplnmMLE.R |only ztpln-0.1.3/ztpln/build/vignette.rds |binary ztpln-0.1.3/ztpln/inst/doc/ztpln.R | 10 ztpln-0.1.3/ztpln/inst/doc/ztpln.Rmd |only ztpln-0.1.3/ztpln/inst/doc/ztpln.html | 562 +++++++++++++++++++------- ztpln-0.1.3/ztpln/man/dztpln.Rd | 2 ztpln-0.1.3/ztpln/man/dztplnm.Rd | 2 ztpln-0.1.3/ztpln/man/ztpln-package.Rd | 2 ztpln-0.1.3/ztpln/man/ztplnMLE.Rd | 2 ztpln-0.1.3/ztpln/man/ztplnmMLE.Rd | 2 ztpln-0.1.3/ztpln/src/Makevars | 2 ztpln-0.1.3/ztpln/src/Makevars.win | 2 ztpln-0.1.3/ztpln/tests/testthat/test_ztpln.R |only ztpln-0.1.3/ztpln/vignettes/ztpln.Rmd |only 28 files changed, 454 insertions(+), 190 deletions(-)
Title: Access Indonesian Data via Public APIs and Curated Datasets
Description: Provides functions to access data from public RESTful APIs including
'Nager.Date', 'World Bank API', and 'REST Countries API', retrieving real-time or historical
data related to Indonesia, such as holidays, economic indicators, and international
demographic and geopolitical indicators. The package also includes a curated collection of
open datasets focused on Indonesia, covering topics such as consumer prices, poverty
probability, food prices by region, tourism destinations, and minimum wage statistics.
The package supports reproducible research and teaching by integrating reliable
international APIs and structured datasets from public, academic, and government sources.
For more information on the APIs, see:
'Nager.Date' <https://date.nager.at/Api>,
'World Bank API' <https://datahelpdesk.worldbank.org/knowledgebase/articles/889392>,
and 'REST Countries API' <https://restcountries.com/>.
Author: Renzo Caceres Rossi [aut, cre]
Maintainer: Renzo Caceres Rossi <arenzocaceresrossi@gmail.com>
Diff between IndonesiAPIs versions 0.1.0 dated 2025-09-09 and 0.1.1 dated 2025-11-28
DESCRIPTION | 9 - MD5 | 101 +++++++++--------- NAMESPACE | 2 NEWS.md |only R/data-documentation.R | 2 R/get_country_info_idn.R | 56 +++++++++- R/get_indonesia_child_mortality.R | 50 +++++++-- R/get_indonesia_cpi.R | 50 +++++++-- R/get_indonesia_energy_use.R | 50 +++++++-- R/get_indonesia_gdp.R | 50 +++++++-- R/get_indonesia_holidays.R | 47 +++++++- R/get_indonesia_hospital_beds.R | 50 +++++++-- R/get_indonesia_life_expectancy.R | 50 +++++++-- R/get_indonesia_literacy_rate.R | 73 +++++++++---- R/get_indonesia_population.R | 77 ++++++++++---- R/get_indonesia_unemployment.R | 84 +++++++++++---- R/indonesiapis-package.R | 2 R/utils.R | 2 R/view_datasets_IndonesiAPIs.R | 2 README.md | 6 + build/vignette.rds |binary inst/CITATION | 7 - inst/doc/IndonesiAPIs_vignette.html | 5 man/get_country_info_idn.Rd | 3 man/get_indonesia_child_mortality.Rd | 5 man/get_indonesia_cpi.Rd | 5 man/get_indonesia_energy_use.Rd | 5 man/get_indonesia_gdp.Rd | 5 man/get_indonesia_holidays.Rd | 3 man/get_indonesia_hospital_beds.Rd | 5 man/get_indonesia_life_expectancy.Rd | 5 man/get_indonesia_literacy_rate.Rd | 23 ++-- man/get_indonesia_population.Rd | 27 ++--- man/get_indonesia_unemployment.Rd | 26 ++-- tests/testthat/test-Bali_tbl_df.R | 2 tests/testthat/test-DKIJakarta_tbl_df.R | 2 tests/testthat/test-SumateraUtara_tbl_df.R | 2 tests/testthat/test-bali_tourism_tbl_df.R | 2 tests/testthat/test-get_country_info_idn.R | 6 - tests/testthat/test-get_indonesia_child_mortality.R | 7 - tests/testthat/test-get_indonesia_cpi.R | 18 ++- tests/testthat/test-get_indonesia_energy_use.R | 33 ++---- tests/testthat/test-get_indonesia_gdp.R | 75 ++++++-------- tests/testthat/test-get_indonesia_holidays.R | 69 +++++++++--- tests/testthat/test-get_indonesia_hospital_beds.R | 72 +++++++++---- tests/testthat/test-get_indonesia_life_expectancy.R | 87 +++++----------- tests/testthat/test-get_indonesia_literacy_rate.R | 99 ++++++++---------- tests/testthat/test-get_indonesia_population.R | 102 +++++++------------ tests/testthat/test-get_indonesia_unemployment.R | 107 ++++++++------------ tests/testthat/test-indonesia_latlong_df.R | 2 tests/testthat/test-indonesia_minwage_tbl_df.R | 2 tests/testthat/test-view_datasets_IndonesiAPIs.R | 2 52 files changed, 985 insertions(+), 591 deletions(-)
Title: Spatial Data Analysis
Description: Methods for spatial data analysis with vector (points, lines, polygons) and raster (grid) data. Methods for vector data include geometric operations such as intersect and buffer. Raster methods include local, focal, global, zonal and geometric operations. The predict and interpolate methods facilitate the use of regression type (interpolation, machine learning) models for spatial prediction, including with satellite remote sensing data. Processing of very large files is supported. See the manual and tutorials on <https://rspatial.org/> to get started.
Author: Robert J. Hijmans [cre, aut] ,
Marcia Barbosa [ctb] ,
Roger Bivand [ctb] ,
Andrew Brown [ctb] ,
Michael Chirico [ctb] ,
Emanuele Cordano [ctb] ,
Krzysztof Dyba [ctb] ,
Edzer Pebesma [ctb] ,
Barry Rowlingson [ctb] ,
Michael D. Sumner [ctb]
Maintainer: Robert J. Hijmans <r.hijmans@gmail.com>
Diff between terra versions 1.8-80 dated 2025-11-05 and 1.8-86 dated 2025-11-28
DESCRIPTION | 12 ++-- MD5 | 97 +++++++++++++++++---------------- NAMESPACE | 2 NEWS.md | 30 ++++++++++ R/Agenerics.R | 1 R/SpatRasterDataset.R | 13 +++- R/chunk.R |only R/click.R | 6 +- R/extent.R | 10 +++ R/focal.R | 10 ++- R/generics.R | 81 +++++++++++++++++++--------- R/geom.R | 9 ++- R/messages.R | 6 +- R/plot.R | 1 R/plot_add.R | 10 +-- R/plot_raster.R | 3 + R/plot_vector.R | 33 +++++++---- R/spatvec.R | 28 +++++++++ R/vect.R | 44 +++++++++++++-- R/xyRowColCell.R | 34 +++++------ inst/tinytest/test_crds.R | 7 ++ inst/tinytest/test_extract.R | 2 inst/tinytest/test_vector-empty.R |only man/boundaries.Rd | 13 ++-- man/centroids.Rd | 12 +++- man/chunk.Rd |only man/ext.Rd | 1 man/extract.Rd | 6 +- man/extractRange.Rd | 2 man/fill.Rd | 25 +++++++- man/is.valid.Rd | 11 +++ man/legend.Rd | 3 - man/makeTiles.Rd | 2 man/plot.Rd | 2 man/resample.Rd | 2 man/stretch.Rd | 6 +- man/vect.Rd | 4 - src/Makevars.ucrt | 14 ++-- src/RcppModule.cpp | 2 src/distRaster.cpp | 100 ++++++++++++++++++++++++---------- src/distValueRaster.cpp | 8 +- src/gdal_multidimensional.cpp | 2 src/geos_methods.cpp | 21 ++++--- src/nearest.cpp | 8 +- src/raster_methods.cpp | 109 ++++++++++++++++++++++++++++++++------ src/read_gdal.cpp | 17 ++++- src/read_ogr.cpp | 5 + src/spatRaster.cpp | 40 +++++++------ src/spatRaster.h | 6 +- src/vecmath.h | 15 ++++- src/write_ogr.cpp | 37 ++++++++---- 51 files changed, 649 insertions(+), 263 deletions(-)
Title: Handling Taxonomic Lists
Description: Handling taxonomic lists through objects of class 'taxlist'.
This package provides functions to import species lists from 'Turboveg'
(<https://www.synbiosys.alterra.nl/turboveg/>) and the possibility to create
backups from resulting R-objects.
Also quick displays are implemented as summary-methods.
Author: Miguel Alvarez [aut, cre] ,
Zachary Foster [ctb] ,
Sam Levin [rev],
Margaret Siple [rev]
Maintainer: Miguel Alvarez <kamapu78@gmail.com>
Diff between taxlist versions 0.3.0 dated 2024-07-03 and 0.3.5 dated 2025-11-28
DESCRIPTION | 25 +++--- MD5 | 54 ++++++++------ NAMESPACE | 7 + NEWS.md | 26 +++++++ R/accepted_name.R | 5 - R/backup_object.R | 12 +-- R/id_generator.R | 10 +- R/imports.R | 1 R/indented_list.R | 6 + R/internal.R | 158 +++++++++++++++++++++++++++++++++++++++++++ R/merge_taxa.R | 5 - R/print_name.R | 2 R/reindex.R |only R/sort_taxa.R |only R/summary.R | 36 +++++++-- R/sysdata.rda |binary R/tax2traits.R | 49 ------------- R/taxlist2df.R | 7 + R/tv2taxlist.R | 2 build/partial.rdb |binary build/vignette.rds |binary data/Easplist.rda |binary inst/doc/taxlist-intro.R | 8 +- inst/doc/taxlist-intro.html | 71 ++++++++++--------- man/arrange_taxa.Rd |only man/figures/genera_bar-1.png |binary man/print_name.Rd | 3 man/reindex.Rd |only man/sort_taxa.Rd |only man/tv.home.Rd |only man/tv2taxlist.Rd | 2 31 files changed, 337 insertions(+), 152 deletions(-)
Title: Parametric Statistical Modelling and Inference for the
'spatstat' Family
Description: Functionality for parametric statistical modelling and inference for spatial data,
mainly spatial point patterns, in the 'spatstat' family of packages.
(Excludes analysis of spatial data on a linear network,
which is covered by the separate package 'spatstat.linnet'.)
Supports parametric modelling, formal statistical inference, and model validation.
Parametric models include Poisson point processes, Cox point processes, Neyman-Scott cluster processes, Gibbs point processes and determinantal point processes. Models can be fitted to data using maximum likelihood, maximum pseudolikelihood, maximum composite likelihood and the method of minimum contrast. Fitted models can be simulated and predicted. Formal inference includes hypothesis tests (quadrat counting tests, Cressie-Read tests, Clark-Evans test, Berman test, Diggle-Cressie-Loosmore-Ford test, scan test, studentised permutation test, segregation test, ANOVA tests of fitted models, adjusted composite likelihood ratio test, envelope t [...truncated...]
Author: Adrian Baddeley [aut, cre, cph] ,
Rolf Turner [aut, cph] ,
Ege Rubak [aut, cph] ,
Kasper Klitgaard Berthelsen [ctb],
Achmad Choiruddin [ctb, cph],
Jean-Francois Coeurjolly [ctb],
Ottmar Cronie [ctb],
Tilman Davies [ctb],
Julian Gilbey [ctb],
Yongtao [...truncated...]
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between spatstat.model versions 3.4-2 dated 2025-09-28 and 3.5-0 dated 2025-11-28
DESCRIPTION | 16 - MD5 | 91 ++++----- NAMESPACE | 17 + NEWS | 75 +++++++ R/aaaa.R | 2 R/augment.msr.R | 10 - R/bermantest.R | 2 R/diagnoseppm.R | 305 ++++++++++++++++---------------- R/dppm.R | 8 R/eem.R | 15 + R/evidence.R | 4 R/evidenceslrm.R | 12 - R/kppm.R | 2 R/measures.R | 49 ++++- R/mpl.R | 2 R/mppm.R | 78 ++++++-- R/parres.R | 233 ++++++++++++++++++------ R/predictmppm.R | 74 +++++++ R/qqplotppm.R | 11 - R/quadratmtest.R | 4 R/quadrattest.R | 2 R/resid4plot.R | 35 +-- R/residexactppm.R |only R/residuals.mppm.R | 5 R/rocmodel.R | 389 ++++++++++++++++++++++++++++++++++++++--- R/slrm.R | 276 ++++++++++++++++++++++------- R/subfits.R | 39 +++- R/summary.mppm.R | 11 - R/sysdata.rda |binary R/update.ppm.R | 8 build/partial.rdb |binary inst/doc/packagesizes.txt | 2 inst/info/packagesizes.txt | 2 man/auc.ppm.Rd | 4 man/diagnose.ppm.Rd | 21 +- man/fitted.slrm.Rd | 44 +++- man/lurking.Rd | 2 man/macros/defns.Rd | 3 man/mppm.Rd | 22 ++ man/parres.Rd | 29 ++- man/predict.slrm.Rd | 36 +++ man/qqplot.ppm.Rd | 18 - man/residualMeasure.Rd | 6 man/roc.ppm.Rd | 51 ++++- man/slrm.Rd | 90 ++++++++- man/spatstat.model-internal.Rd | 24 +- tests/testsR1.R | 7 47 files changed, 1611 insertions(+), 525 deletions(-)
More information about spatstat.model at CRAN
Permanent link
Title: Memory-Map Character Files
Description: Uses memory-mapping to enable the random access of elements of
a text file of characters separated by characters as if it were a simple
R(cpp) matrix.
Author: Florian Prive [aut, cre]
Maintainer: Florian Prive <florian.prive.21@gmail.com>
Diff between mmapcharr versions 0.3.0 dated 2019-02-26 and 0.3.1 dated 2025-11-28
mmapcharr-0.3.0/mmapcharr/man/mmapcharr.Rd |only mmapcharr-0.3.1/mmapcharr/DESCRIPTION | 13 mmapcharr-0.3.1/mmapcharr/MD5 | 44 +- mmapcharr-0.3.1/mmapcharr/NAMESPACE | 26 - mmapcharr-0.3.1/mmapcharr/R/RcppExports.R | 38 - mmapcharr-0.3.1/mmapcharr/R/extract.R | 166 ++++---- mmapcharr-0.3.1/mmapcharr/R/file-dim.R | 162 ++++---- mmapcharr-0.3.1/mmapcharr/R/mmapchar.R | 268 ++++++------- mmapcharr-0.3.1/mmapcharr/R/mmapcharr-package.r | 15 mmapcharr-0.3.1/mmapcharr/R/utils.R | 40 +- mmapcharr-0.3.1/mmapcharr/inst/testdata/geno3pops.lfmm | 300 +++++++-------- mmapcharr-0.3.1/mmapcharr/inst/testdata/test-windows.txt | 4 mmapcharr-0.3.1/mmapcharr/man/Extract.Rd | 70 +-- mmapcharr-0.3.1/mmapcharr/man/dim_file.Rd | 46 +- mmapcharr-0.3.1/mmapcharr/man/mmapchar-class.Rd | 62 +-- mmapcharr-0.3.1/mmapcharr/man/mmapchar-methods.Rd | 79 +-- mmapcharr-0.3.1/mmapcharr/man/mmapcharr-package.Rd |only mmapcharr-0.3.1/mmapcharr/man/nelem.Rd | 44 +- mmapcharr-0.3.1/mmapcharr/man/nline.Rd | 44 +- mmapcharr-0.3.1/mmapcharr/src/Makevars | 1 mmapcharr-0.3.1/mmapcharr/src/RcppExports.cpp | 5 mmapcharr-0.3.1/mmapcharr/tests/testthat.R | 8 mmapcharr-0.3.1/mmapcharr/tests/testthat/test-extract.R | 132 +++--- mmapcharr-0.3.1/mmapcharr/tests/testthat/test-file-dim.R | 84 ++-- 24 files changed, 825 insertions(+), 826 deletions(-)
Title: Bindings for 'Mapbox' Ear Cutting Triangulation Library
Description: Provides constrained triangulation of polygons. Ear cutting (or
ear clipping) applies constrained triangulation by successively 'cutting'
triangles from a polygon defined by path/s. Holes are supported by introducing
a bridge segment between polygon paths. This package wraps the 'header-only'
library 'earcut.hpp' <https://github.com/mapbox/earcut.hpp> which includes
a reference to the method used by Held, M. (2001) <doi:10.1007/s00453-001-0028-4>.
Author: Michael Sumner [aut, cre],
Andrew Smith [ctb] ,
Mapbox [cph] ,
Mark Padgham [ctb] ,
David Cooley [ctb]
Maintainer: Michael Sumner <mdsumner@gmail.com>
Diff between decido versions 0.3.0 dated 2020-05-19 and 0.4.0 dated 2025-11-28
decido-0.3.0/decido/tests/testthat/Rplots.pdf |only decido-0.4.0/decido/DESCRIPTION | 16 decido-0.4.0/decido/MD5 | 31 - decido-0.4.0/decido/NEWS.md | 10 decido-0.4.0/decido/R/decido-package.R | 7 decido-0.4.0/decido/README.md | 18 decido-0.4.0/decido/build/vignette.rds |binary decido-0.4.0/decido/inst/doc/decido.R | 36 - decido-0.4.0/decido/inst/doc/decido.Rmd | 22 decido-0.4.0/decido/inst/doc/decido.html | 547 ++++++++------------ decido-0.4.0/decido/inst/include/earcut.h | 2 decido-0.4.0/decido/man/decido-package.Rd | 14 decido-0.4.0/decido/man/figures/README-tricks-1.png |binary decido-0.4.0/decido/src/Makevars | 1 decido-0.4.0/decido/src/Makevars.win | 1 decido-0.4.0/decido/src/RcppExports.cpp | 5 decido-0.4.0/decido/vignettes/decido.Rmd | 22 17 files changed, 315 insertions(+), 417 deletions(-)