Title: Record 'HTTP' Calls to Disk
Description: Record test suite 'HTTP' requests and replays them during
future runs. A port of the Ruby gem of the same name
(<https://github.com/vcr/vcr/>). Works by recording real 'HTTP'
requests/responses on disk in 'cassettes', and then replaying
matching responses on subsequent requests.
Author: Scott Chamberlain [aut, cre] ,
Aaron Wolen [aut] ,
Maelle Salmon [aut] ,
Daniel Possenriede [aut] ,
Hadley Wickham [aut],
rOpenSci [fnd]
Maintainer: Scott Chamberlain <myrmecocystus@gmail.com>
Diff between vcr versions 2.0.0 dated 2025-07-23 and 2.1.0 dated 2025-12-05
DESCRIPTION | 6 +++--- MD5 | 20 ++++++++++---------- NEWS.md | 7 ++++++- build/vignette.rds |binary inst/doc/debugging.html | 24 ++++++++++++------------ inst/doc/knitr-test.html | 4 ++-- inst/doc/vcr.html | 24 ++++++++++++------------ tests/testthat/_snaps/check_cassette_names.md | 2 +- tests/testthat/_snaps/lightswitch.md | 2 +- tests/testthat/test-ause_cassette_re_record.R | 4 ++-- tests/testthat/test-check_cassette_names.R | 3 ++- 11 files changed, 51 insertions(+), 45 deletions(-)
Title: Tests for Geophysical Eigenvalues
Description: The eigenvalues of observed symmetric matrices are often of intense scientific interest. This package offers single sample tests for the eigenvalues of the population mean or the eigenvalue-multiplicity of the population mean. For k-samples, this package offers tests for equal eigenvalues between samples. Included is support for matrices with constraints common to geophysical tensors (constant trace, sum of squared eigenvalues, or both) and eigenvectors are usually considered nuisance parameters. Pivotal bootstrap methods enable these tests to have good performance for small samples (n=15 for 3x3 matrices). These methods were developed and studied by Hingee, Scealy and Wood (2026, "Nonparametric bootstrap inference for the eigenvalues of geophysical tensors", accepted by the Journal of American Statistical Association). Also available is a 2-sample test using a Gaussian orthogonal ensemble approximation and an eigenvalue-multiplicity test that assumes orthogonally-invariant covariance.
Author: Kassel Liam Hingee [aut, cre] ,
Art B. Owen [cph] ,
Board of Trustees Leland Stanford Junior University [cph]
Maintainer: Kassel Liam Hingee <kassel.hingee@anu.edu.au>
Diff between TFORGE versions 0.1.14 dated 2025-12-04 and 0.1.15 dated 2025-12-05
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 3 +++ build/partial.rdb |binary tests/testthat/test-multiplicity.R | 17 ++++++++++++++++- 5 files changed, 26 insertions(+), 8 deletions(-)
Title: Benchmark for Publication Bias Correction Methods
Description: Implements a unified interface for benchmarking meta-analytic
publication bias correction methods through simulation studies (see
Bartoš et al., 2025, <doi:10.48550/arXiv.2510.19489>). It provides
1) predefined data-generating mechanisms from the literature, 2) functions
for running meta-analytic methods on simulated data, 3) pre-simulated
datasets and pre-computed results for reproducible benchmarks, 4) tools for
visualizing and comparing method performance.
Author: Frantisek Bartos [aut, cre] ,
Samuel Pawel [aut] ,
Bjoern S. Siepe [aut]
Maintainer: Frantisek Bartos <f.bartos96@gmail.com>
Diff between PublicationBiasBenchmark versions 0.1.2 dated 2025-11-26 and 0.1.3 dated 2025-12-05
DESCRIPTION | 6 +- MD5 | 28 +++++----- NAMESPACE | 30 +++++++++++ NEWS.md | 9 +++ R/dgm.R | 12 ++++ R/download.R | 2 R/measures.R | 130 +++++++++++++++++++++++++++++++++++++++++++++++++++ R/measures_compute.R | 42 +++++----------- R/method-RoBMA.R | 4 + R/method.R | 12 ++++ R/utilities.R | 16 +++--- build/partial.rdb |binary inst/REFERENCES.bib | 9 +++ man/measure.Rd |only man/measure_mcse.Rd |only man/method.RoBMA.Rd | 4 + 16 files changed, 248 insertions(+), 56 deletions(-)
More information about PublicationBiasBenchmark at CRAN
Permanent link
Title: Presentation-Ready Data Summary and Analytic Result Tables
Description: Creates presentation-ready tables summarizing data sets,
regression models, and more. The code to create the tables is concise
and highly customizable. Data frames can be summarized with any
function, e.g. mean(), median(), even user-written functions.
Regression models are summarized and include the reference rows for
categorical variables. Common regression models, such as logistic
regression and Cox proportional hazards regression, are automatically
identified and the tables are pre-filled with appropriate column
headers.
Author: Daniel D. Sjoberg [aut, cre] ,
Joseph Larmarange [aut] ,
Michael Curry [aut] ,
Emily de la Rua [aut] ,
Jessica Lavery [aut] ,
Karissa Whiting [aut] ,
Emily C. Zabor [aut] ,
Xing Bai [ctb],
Malcolm Barrett [ctb] ,
Esther Drill [ctb] ,
Jessica Flynn [c [...truncated...]
Maintainer: Daniel D. Sjoberg <danield.sjoberg@gmail.com>
Diff between gtsummary versions 2.4.0 dated 2025-08-28 and 2.5.0 dated 2025-12-05
DESCRIPTION | 10 MD5 | 348 ++--- NAMESPACE | 6 NEWS.md | 32 R/add_ci.R | 4 R/add_ci.tbl_svysummary.R | 4 R/add_overall.R | 12 R/assign_summary_type.R | 6 R/brdg_summary.R | 4 R/deprecated.R | 6 R/gather_ard.R | 2 R/gtsummary-package.R | 1 R/head.R |only R/import-standalone-check_pkg_installed.R | 95 - R/import-standalone-cli_call_env.R | 4 R/modify_abbreviation.R | 3 R/modify_footnote.R | 1 R/modify_source_note.R | 2 R/sort_hierarchical.R | 57 R/sysdata.rda |binary R/tbl_ard_hierarchical.R | 10 R/tbl_ard_strata.R |only R/tbl_hierarchical.R | 10 R/tbl_merge.R | 58 R/tbl_strata.R | 4 R/tbl_strata_nested_stack.R | 18 R/tbl_summary.R | 24 R/tbl_wide_summary.R | 2 R/utils-add_p_tests.R | 40 R/utils-as.R | 1 build/vignette.rds |binary inst/WORDLIST | 4 inst/doc/gtsummary_definition.Rmd | 6 inst/doc/gtsummary_definition.html | 1129 +++++++++---------- man/add_ci.Rd | 2 man/add_ci.tbl_svysummary.Rd | 2 man/add_difference.tbl_summary.Rd | 2 man/add_difference.tbl_svysummary.Rd | 2 man/add_difference_row.tbl_summary.Rd | 2 man/add_glance.Rd | 2 man/add_global_p.Rd | 2 man/add_n.tbl_survfit.Rd | 2 man/add_n_regression.Rd | 2 man/add_n_summary.Rd | 2 man/add_nevent.tbl_survfit.Rd | 2 man/add_nevent_regression.Rd | 2 man/add_p.tbl_continuous.Rd | 2 man/add_p.tbl_summary.Rd | 2 man/add_p.tbl_survfit.Rd | 2 man/add_p.tbl_svysummary.Rd | 2 man/add_q.Rd | 2 man/add_significance_stars.Rd | 2 man/add_variable_group_header.Rd | 2 man/add_vif.Rd | 2 man/as_flex_table.Rd | 2 man/as_hux_table.Rd | 2 man/as_kable_extra.Rd | 2 man/combine_terms.Rd | 2 man/custom_tidiers.Rd | 2 man/filter_hierarchical.Rd | 2 man/gather_ard.Rd | 2 man/glance_fun_s3.Rd | 2 man/global_pvalue_fun.Rd | 2 man/head.gtsummary.Rd |only man/inline_text.tbl_regression.Rd | 2 man/inline_text.tbl_survfit.Rd | 2 man/inline_text.tbl_uvregression.Rd | 2 man/modify.Rd | 2 man/modify_abbreviation.Rd | 7 man/modify_bold_italic.Rd | 2 man/modify_column_merge.Rd | 2 man/modify_footnote2.Rd | 5 man/modify_missing_symbol.Rd | 2 man/modify_source_note.Rd | 6 man/plot.Rd | 2 man/proportion_summary.Rd | 2 man/sort_hierarchical.Rd | 16 man/tbl_ard_hierarchical.Rd | 2 man/tbl_ard_strata.Rd |only man/tbl_butcher.Rd | 2 man/tbl_continuous.Rd | 2 man/tbl_hierarchical.Rd | 3 man/tbl_merge.Rd | 14 man/tbl_regression.Rd | 2 man/tbl_split_by.Rd | 2 man/tbl_stack.Rd | 2 man/tbl_strata.Rd | 13 man/tbl_summary.Rd | 5 man/tbl_survfit.Rd | 2 man/tbl_svysummary.Rd | 2 man/tbl_uvregression.Rd | 2 man/tbl_wide_summary.Rd | 4 tests/testthat/_snaps/add_p.tbl_summary.md | 134 -- tests/testthat/_snaps/filter_hierarchical.md | 44 tests/testthat/_snaps/gather_ard.md |only tests/testthat/_snaps/sort_hierarchical.md | 82 - tests/testthat/_snaps/tbl_ard_strata.md |only tests/testthat/_snaps/tbl_hierarchical.md | 195 +-- tests/testthat/_snaps/tbl_merge.md | 3 tests/testthat/_snaps/tbl_summary.md | 39 tests/testthat/test-add_ci.tbl_summary.R | 2 tests/testthat/test-add_ci.tbl_svysummary.R | 5 tests/testthat/test-add_difference.tbl_summary.R | 16 tests/testthat/test-add_difference.tbl_svysummary.R | 6 tests/testthat/test-add_difference_row.tbl_summary.R | 8 tests/testthat/test-add_glance.R | 5 tests/testthat/test-add_global_p.tbl_regression.R | 3 tests/testthat/test-add_global_p.tbl_uvregression.R | 2 tests/testthat/test-add_n.tbl_regression.R | 2 tests/testthat/test-add_n.tbl_svysummary.R | 2 tests/testthat/test-add_n.tbl_uvregression.R | 2 tests/testthat/test-add_nevent.tbl_regression.R | 2 tests/testthat/test-add_nevent.tbl_uvregression.R | 2 tests/testthat/test-add_overall.tbl_custom_summary.R | 2 tests/testthat/test-add_overall.tbl_hierarchical.R | 2 tests/testthat/test-add_overall.tbl_svysummary.R | 2 tests/testthat/test-add_p.tbl_continuous.R | 2 tests/testthat/test-add_p.tbl_summary.R | 28 tests/testthat/test-add_p.tbl_survfit.R | 2 tests/testthat/test-add_p.tbl_svysummary.R | 6 tests/testthat/test-add_significance_stars.R | 2 tests/testthat/test-add_stat.R | 2 tests/testthat/test-add_stat_label.tbl_ard_summary.R | 2 tests/testthat/test-add_stat_label.tbl_svysummary.R | 2 tests/testthat/test-add_variable_group_header.R | 2 tests/testthat/test-add_vif.R | 2 tests/testthat/test-as_flex_table.R | 7 tests/testthat/test-as_gt.R | 2 tests/testthat/test-as_hux_table.R | 8 tests/testthat/test-as_kable.R | 6 tests/testthat/test-as_kable_extra.R | 4 tests/testthat/test-as_tibble.R | 2 tests/testthat/test-combine_terms.R | 8 tests/testthat/test-custom_tidiers.R | 10 tests/testthat/test-filter_hierarchical.R | 18 tests/testthat/test-gather_ard.R | 9 tests/testthat/test-head.R |only tests/testthat/test-inline_text.R | 6 tests/testthat/test-label_style.R | 2 tests/testthat/test-modify_abbreviation.R | 2 tests/testthat/test-modify_bold_italic.R | 2 tests/testthat/test-modify_caption.R | 7 tests/testthat/test-modify_column_alignment.R | 2 tests/testthat/test-modify_column_hide.R | 2 tests/testthat/test-modify_column_merge.R | 2 tests/testthat/test-modify_fmt_fun.R | 2 tests/testthat/test-modify_footnote.R | 6 tests/testthat/test-modify_header.R | 6 tests/testthat/test-modify_missing_symbol.R | 2 tests/testthat/test-modify_spanning_header.R | 7 tests/testthat/test-modify_table_body.R | 2 tests/testthat/test-modify_table_styling.R | 2 tests/testthat/test-plot.tbl_regression.R | 2 tests/testthat/test-plot.tbl_uvregression.R | 2 tests/testthat/test-remove_row_type.R | 2 tests/testthat/test-select_helpers.R | 2 tests/testthat/test-separate_p_footnotes.R | 4 tests/testthat/test-show_header_names.R | 2 tests/testthat/test-sort_filter_p.R | 2 tests/testthat/test-sort_hierarchical.R | 16 tests/testthat/test-tbl_ard_hierarchical.R | 23 tests/testthat/test-tbl_ard_strata.R |only tests/testthat/test-tbl_ard_summary.R | 2 tests/testthat/test-tbl_butcher.R | 2 tests/testthat/test-tbl_hierarchical.R | 22 tests/testthat/test-tbl_likert.R | 2 tests/testthat/test-tbl_merge.R | 25 tests/testthat/test-tbl_regression.R | 2 tests/testthat/test-tbl_regression_methods.R | 18 tests/testthat/test-tbl_stack.R | 2 tests/testthat/test-tbl_strata.R | 5 tests/testthat/test-tbl_strata_nested_stack.R | 38 tests/testthat/test-tbl_summary.R | 45 tests/testthat/test-tbl_survfit.R | 2 tests/testthat/test-tbl_svysummary.R | 2 tests/testthat/test-tbl_uvregression.R | 2 tests/testthat/test-theme_elements_gtsummary.R | 290 ++++ tests/testthat/test-theme_gtsummary.R | 4 vignettes/gtsummary_definition.Rmd | 6 179 files changed, 1962 insertions(+), 1368 deletions(-)
Title: Genome-Wide Robust Analysis for Biobank Data (GRAB)
Description: Provides a comprehensive suite of genome-wide association study (GWAS) methods
specifically designed for biobank-scale data, including but not limited to, robust approaches
for time-to-event traits (Li et al., 2025 <doi:10.1038/s43588-025-00864-z>) and ordinal
categorical traits (Bi et al., 2021 <doi:10.1016/j.ajhg.2021.03.019>). The package also offers
general frameworks for GWAS of any trait type (Bi et al., 2020 <doi:10.1016/j.ajhg.2020.06.003>),
while accounting for sample relatedness (Xu et al., 2025 <doi:10.1038/s41467-025-56669-1>) or
population structure (Ma et al., 2025 <doi:10.1186/s13059-025-03827-9>). By accurately
approximating score statistic distributions using saddlepoint approximation (SPA), these
methods can effectively control type I error rates for rare variants and in the presence of
unbalanced phenotype distributions. Additionally, the package includes functions for simulating
genotype and phenotype data to support research and method [...truncated...]
Author: Wenjian Bi [aut],
Wei Zhou [aut],
Rounak Dey [aut],
Zhangchen Zhao [aut],
Seunggeun Lee [aut],
Woody Miao [cre]
Maintainer: Woody Miao <miaolin@pku.edu.cn>
Diff between GRAB versions 0.2.3 dated 2025-08-19 and 0.2.4 dated 2025-12-05
GRAB-0.2.3/GRAB/R/CCT.R |only GRAB-0.2.3/GRAB/R/DenseGRM.R |only GRAB-0.2.3/GRAB/R/PairwiseIBD.R |only GRAB-0.2.3/GRAB/R/SparseGRM.R |only GRAB-0.2.3/GRAB/R/control.R |only GRAB-0.2.3/GRAB/R/formula.R |only GRAB-0.2.3/GRAB/man/Batcheffect.Test.Rd |only GRAB-0.2.3/GRAB/man/checkIfSampleIDsExist.Rd |only GRAB-0.2.3/GRAB/man/getDenseGRM.Rd |only GRAB-0.2.3/GRAB/man/getSampleIDsFromBGEN.Rd |only GRAB-0.2.3/GRAB/man/getVersionFromBGEN.Rd |only GRAB-0.2.3/GRAB/man/handleFormula.Rd |only GRAB-0.2.3/GRAB/man/makeGroup.Rd |only GRAB-0.2.3/GRAB/man/setDenseGRM.Rd |only GRAB-0.2.4/GRAB/DESCRIPTION | 28 GRAB-0.2.4/GRAB/MD5 | 114 - GRAB-0.2.4/GRAB/NAMESPACE | 16 GRAB-0.2.4/GRAB/R/GRAB_Marker.R | 505 +++---- GRAB-0.2.4/GRAB/R/GRAB_Null_Model.R | 528 +++----- GRAB-0.2.4/GRAB/R/GRAB_Region.R | 1070 ++++++++-------- GRAB-0.2.4/GRAB/R/GRAB_Simu.R | 1358 ++++++++++++-------- GRAB-0.2.4/GRAB/R/GRM_IBD.R |only GRAB-0.2.4/GRAB/R/Geno.R | 565 +++++--- GRAB-0.2.4/GRAB/R/POLMM.R | 766 +++++++---- GRAB-0.2.4/GRAB/R/RcppExports.R | 32 GRAB-0.2.4/GRAB/R/SAGELD.R | 527 ++++---- GRAB-0.2.4/GRAB/R/SPACox.R | 266 ++-- GRAB-0.2.4/GRAB/R/SPAGRM.R | 1511 ++++++++++------------- GRAB-0.2.4/GRAB/R/SPAmix.R | 333 +++-- GRAB-0.2.4/GRAB/R/Util.R | 572 ++++---- GRAB-0.2.4/GRAB/R/WtCoxG.R | 785 ++++++----- GRAB-0.2.4/GRAB/R/zzz.R | 10 GRAB-0.2.4/GRAB/README.md | 6 GRAB-0.2.4/GRAB/build |only GRAB-0.2.4/GRAB/man/CCT.Rd | 48 GRAB-0.2.4/GRAB/man/GRAB.Marker.Rd | 183 -- GRAB-0.2.4/GRAB/man/GRAB.NullModel.Rd | 217 --- GRAB-0.2.4/GRAB/man/GRAB.POLMM.Rd | 159 +- GRAB-0.2.4/GRAB/man/GRAB.POLMM.Region.Rd |only GRAB-0.2.4/GRAB/man/GRAB.ReadGeno.Rd | 103 - GRAB-0.2.4/GRAB/man/GRAB.Region.Rd | 158 -- GRAB-0.2.4/GRAB/man/GRAB.SAGELD.Rd | 5 GRAB-0.2.4/GRAB/man/GRAB.SPACox.Rd | 78 - GRAB-0.2.4/GRAB/man/GRAB.SPAGRM.Rd | 55 GRAB-0.2.4/GRAB/man/GRAB.SPAmix.Rd | 97 - GRAB-0.2.4/GRAB/man/GRAB.SimuGMat.Rd | 51 GRAB-0.2.4/GRAB/man/GRAB.SimuGMatFromGenoFile.Rd | 56 GRAB-0.2.4/GRAB/man/GRAB.SimuPheno.Rd | 37 GRAB-0.2.4/GRAB/man/GRAB.SimubVec.Rd | 32 GRAB-0.2.4/GRAB/man/GRAB.WtCoxG.Rd | 102 - GRAB-0.2.4/GRAB/man/GRAB.getGenoInfo.Rd | 34 GRAB-0.2.4/GRAB/man/GRAB.makePlink.Rd | 58 GRAB-0.2.4/GRAB/man/SAGELD.NullModel.Rd | 71 - GRAB-0.2.4/GRAB/man/SPAGRM.NullModel.Rd | 30 GRAB-0.2.4/GRAB/man/TestforBatchEffect.Rd | 24 GRAB-0.2.4/GRAB/man/fitNullModel.POLMM.Rd |only GRAB-0.2.4/GRAB/man/fitNullModel.SPACox.Rd |only GRAB-0.2.4/GRAB/man/fitNullModel.SPAmix.Rd |only GRAB-0.2.4/GRAB/man/fitNullModel.WtCoxG.Rd |only GRAB-0.2.4/GRAB/man/getPairwiseIBD.Rd |only GRAB-0.2.4/GRAB/man/getSparseGRM.Rd | 53 GRAB-0.2.4/GRAB/man/getTempFilesFullGRM.Rd | 39 GRAB-0.2.4/GRAB/src/Main.cpp | 401 +----- GRAB-0.2.4/GRAB/src/POLMM.cpp | 3 GRAB-0.2.4/GRAB/src/RcppExports.cpp | 85 - GRAB-0.2.4/GRAB/src/SAGELD.h | 2 GRAB-0.2.4/GRAB/src/SPAGRM.h | 2 GRAB-0.2.4/GRAB/src/WtCoxG.cpp | 624 ++++----- GRAB-0.2.4/GRAB/src/WtCoxG.h | 208 +-- 69 files changed, 6154 insertions(+), 5853 deletions(-)
Title: Data Utilities for Congressional Research
Description: Provides easy-to-understand and consistent interfaces for
accessing data on the U.S. Congress. The functions in 'filibustr'
streamline the process for importing data on Congress into R, removing
the need to download and work from CSV files and the like. Data
sources include 'Voteview' (<https://voteview.com/>), the U.S. Senate
website (<https://www.senate.gov/>), and more.
Author: Max Feinleib [aut, cre, cph]
Maintainer: Max Feinleib <mhfeinleib@gmail.com>
This is a re-admission after prior archival of version 0.5.0 dated 2025-10-26
Diff between filibustr versions 0.5.0 dated 2025-10-26 and 0.5.1 dated 2025-12-05
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- NEWS.md | 3 +++ R/read_html_table.R | 4 ++-- build/partial.rdb |binary build/vignette.rds |binary man/read_html_table.Rd | 4 ++-- tests/testthat/test-utils_data_cleaning.R | 4 ++-- 8 files changed, 19 insertions(+), 16 deletions(-)
Title: Excess Mortality
Description: Implementation of method for estimating excess mortality and other health related outcomes from weekly or daily count data described in Acosta and Irizarry (2021) "A Flexible Statistical Framework for Estimating Excess Mortality".
Author: Rafael A. Irizarry [aut, cre],
Rolando Acosta [aut],
Monica Robles-Fontan [aut],
Ferenci Tamas [ctb]
Maintainer: Rafael A. Irizarry <rafael_irizarry@dfci.harvard.edu>
Diff between excessmort versions 0.8.1 dated 2025-04-07 and 0.8.2 dated 2025-12-05
DESCRIPTION | 6 +++--- MD5 | 14 +++++++------- R/compute_expected.R | 24 ++++++++++++++++++------ R/excess_plot.R | 2 +- R/expected_diagnostic.R | 26 +++++++++++++------------- R/expected_plot.R | 2 +- build/vignette.rds |binary inst/doc/excessmort.html | 23 ++++++++++++----------- 8 files changed, 55 insertions(+), 42 deletions(-)
Title: Search Download and Handle Data from Copernicus Climate Data
Service
Description: Subset and download data from EU Copernicus Climate Data Service:
<https://cds.climate.copernicus.eu/>. Import information about the Earth's
past, present and future climate from Copernicus into R without the need of
external software.
Author: Pepijn de Vries [aut, cre]
Maintainer: Pepijn de Vries <pepijn.devries@outlook.com>
Diff between CopernicusClimate versions 0.0.3 dated 2025-10-23 and 0.0.4 dated 2025-12-05
DESCRIPTION | 13 ++-- MD5 | 32 ++++++------ NEWS.md | 7 ++ R/cite.R | 2 R/jobs.R | 2 R/retrieve.R | 23 +++++++- R/token.R | 6 +- inst/doc/download.R | 2 inst/doc/download.Rmd | 4 - inst/doc/download.html | 104 ++++++++++++++++++++++++--------------- man/CopernicusClimate-package.Rd | 2 man/cds_account_metrics.Rd | 4 - man/cds_delete_job.Rd | 2 man/cds_get_token.Rd | 2 tests/testthat/test-download.R | 21 +++++++ tests/testthat/test-exceptions.R | 2 vignettes/download.Rmd | 4 - 17 files changed, 149 insertions(+), 83 deletions(-)
More information about CopernicusClimate at CRAN
Permanent link
Title: NHDPlus Tools
Description: Tools for traversing and working with National Hydrography Dataset Plus (NHDPlus) data. All methods implemented in 'nhdplusTools' are available in the NHDPlus documentation available from the US Environmental Protection Agency <https://www.epa.gov/waterdata/basic-information>.
Author: David Blodgett [aut, cre] ,
Mike Johnson [aut] ,
Marc Weber [ctb] ,
Josh Erickson [ctb],
Lauren Koenig [ctb]
Maintainer: David Blodgett <dblodgett@usgs.gov>
Diff between nhdplusTools versions 1.4.0 dated 2025-11-19 and 1.4.1 dated 2025-12-05
DESCRIPTION | 6 MD5 | 12 NEWS.md | 761 +++++++++++++++--------------- R/downloading_tools.R | 824 ++++++++++++++++----------------- R/oafeat_tools.R | 42 + inst/CITATION | 26 - tests/testthat/test_03_get_functions.R | 6 7 files changed, 855 insertions(+), 822 deletions(-)
Title: Linear Mixed Models with Sparse Matrix Methods and Smoothing
Description: Provides tools for fitting linear mixed models using sparse matrix
methods and variance component estimation. Applications include spline-based
modeling of spatial and temporal trends using penalized splines (Boer, 2023)
<doi:10.1177/1471082X231178591>.
Author: Martin Boer [aut] ,
Bart-Jan van Rossum [aut, cre]
Maintainer: Bart-Jan van Rossum <bart-jan.vanrossum@wur.nl>
Diff between LMMsolver versions 1.0.11 dated 2025-08-20 and 1.0.12 dated 2025-12-05
LMMsolver-1.0.11/LMMsolver/man/predictTest.Rd |only LMMsolver-1.0.12/LMMsolver/DESCRIPTION | 21 LMMsolver-1.0.12/LMMsolver/MD5 | 112 +-- LMMsolver-1.0.12/LMMsolver/NAMESPACE | 1 LMMsolver-1.0.12/LMMsolver/NEWS.md | 11 LMMsolver-1.0.12/LMMsolver/R/LMMsolve-class.R | 97 +- LMMsolver-1.0.12/LMMsolver/R/LMMsolve.R | 14 LMMsolver-1.0.12/LMMsolver/R/RcppExports.R | 4 LMMsolver-1.0.12/LMMsolver/R/constructRinv.R | 6 LMMsolver-1.0.12/LMMsolver/R/data.R | 34 LMMsolver-1.0.12/LMMsolver/R/diagnosticsMME.R | 6 LMMsolver-1.0.12/LMMsolver/R/displayMME.R | 6 LMMsolver-1.0.12/LMMsolver/R/effDim.R |only LMMsolver-1.0.12/LMMsolver/R/obtainSmoothTrend.R | 6 LMMsolver-1.0.12/LMMsolver/R/predictFunctions.R | 222 +++--- LMMsolver-1.0.12/LMMsolver/R/spl1D.R | 6 LMMsolver-1.0.12/LMMsolver/R/splinesFunctions.R | 3 LMMsolver-1.0.12/LMMsolver/README.md | 51 - LMMsolver-1.0.12/LMMsolver/build/partial.rdb |binary LMMsolver-1.0.12/LMMsolver/build/vignette.rds |binary LMMsolver-1.0.12/LMMsolver/data/barley.uniformity.trial.rda |only LMMsolver-1.0.12/LMMsolver/data/oats.data.rda |only LMMsolver-1.0.12/LMMsolver/inst/doc/Solving_Linear_Mixed_Models.R | 34 LMMsolver-1.0.12/LMMsolver/inst/doc/Solving_Linear_Mixed_Models.Rmd | 88 +- LMMsolver-1.0.12/LMMsolver/inst/doc/Solving_Linear_Mixed_Models.html | 350 +++++----- LMMsolver-1.0.12/LMMsolver/inst/tinytest/effDim0 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/pred7 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/pred8 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/pred9 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/spl2DFull2 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/spl2DFull3 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/spl3DFull2 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/spl3DFull3 |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_LMMsolve.R | 20 LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_MME_functions.R |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_conditionalFactor.R | 16 LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_effDim.R |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_gam.R | 9 LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_internal_functions.R |only LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_mLogLik.R | 6 LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_multinomial.R | 6 LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_obtainSmoothTrend.R | 29 LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_predict.R | 54 + LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_spl1D.R | 50 - LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_spl2D.R | 19 LMMsolver-1.0.12/LMMsolver/inst/tinytest/test_spl3D.R | 19 LMMsolver-1.0.12/LMMsolver/inst/tinytest/testdata.rda |binary LMMsolver-1.0.12/LMMsolver/man/LMMsolve.Rd | 10 LMMsolver-1.0.12/LMMsolver/man/barley.uniformity.trial.Rd |only LMMsolver-1.0.12/LMMsolver/man/coef.LMMsolve.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/deviance.LMMsolve.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/diagnosticsMME.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/displayMME.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/effDim.Rd |only LMMsolver-1.0.12/LMMsolver/man/fitted.LMMsolve.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/logLik.LMMsolve.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/oats.data.Rd |only LMMsolver-1.0.12/LMMsolver/man/obtainSmoothTrend.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/residuals.LMMsolve.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/spl1D.Rd | 6 LMMsolver-1.0.12/LMMsolver/man/summary.LMMsolve.Rd | 6 LMMsolver-1.0.12/LMMsolver/src/ADcholesky.cpp | 38 - LMMsolver-1.0.12/LMMsolver/src/RcppExports.cpp | 12 LMMsolver-1.0.12/LMMsolver/src/SparseMatrix.cpp | 13 LMMsolver-1.0.12/LMMsolver/vignettes/Solving_Linear_Mixed_Models.Rmd | 88 +- LMMsolver-1.0.12/LMMsolver/vignettes/bibliography.bib | 34 66 files changed, 915 insertions(+), 640 deletions(-)
Title: Tools for Analysing Forensic Genetic DNA Data
Description: Computationally efficient tools for comparing all pairs of profiles
in a DNA database. The expectation and covariance of the summary statistic
is implemented for fast computing. Routines for estimating proportions of
close related individuals are available. The use of wildcards (also called F-
designation) is implemented. Dedicated functions ease plotting the results.
See Tvedebrink et al. (2012) <doi:10.1016/j.fsigen.2011.08.001>.
Compute the distribution of the numbers of alleles in DNA mixtures.
See Tvedebrink (2013) <doi:10.1016/j.fsigss.2013.10.142>.
Author: Torben Tvedebrink [aut],
James Curran [aut],
Mikkel Meyer Andersen [aut, cre]
Maintainer: Mikkel Meyer Andersen <mikl@math.aau.dk>
Diff between DNAtools versions 0.2-4 dated 2022-03-17 and 0.2-5 dated 2025-12-05
DESCRIPTION | 17 +- MD5 | 36 ++--- NEWS | 4 R/DNAtools-package.R | 3 R/dbcompare.R | 4 README.md | 158 ++++++++++++------------ build/vignette.rds |binary inst/CITATION | 36 +++-- inst/doc/db_vignette.R | 6 inst/doc/db_vignette.html | 223 ++++++++++++++++++----------------- inst/doc/dna_vignette.R | 8 - inst/doc/dna_vignette.html | 157 ++++++++++++------------ inst/doc/noa_vignette.R | 28 ++-- inst/doc/noa_vignette.html | 266 +++++++++++++++++++++--------------------- man/DNAtools-package.Rd | 7 + src/Makevars | 1 src/Makevars.win | 1 src/compare_threaded.cpp | 10 + tests/testthat/test-compare.R | 8 + 19 files changed, 506 insertions(+), 467 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-04-19 0.1.0
Title: Shared Memory Multithreading
Description: This project extends 'R' with a mechanism for efficient parallel data access by utilizing 'C++' shared memory. Large data objects can be accessed and manipulated directly from 'R' without redundant copying, providing both speed and memory efficiency.
Author: Julian Maerte [aut, ctr] ,
Romain Francois [ctb],
Michael Thrun [aut, ths, rev, cph, cre]
Maintainer: Michael Thrun <m.thrun@gmx.net>
Diff between memshare versions 1.0.3 dated 2025-11-08 and 1.1.0 dated 2025-12-05
DESCRIPTION | 11 - MD5 | 40 +++-- R/memApply.R | 15 +- R/memLapply.R | 11 + README.md | 329 ++++++++++++++++++++++++------------------------- build/partial.rdb |binary build/vignette.rds |binary inst/CITATION |only inst/doc/memshare.Rmd | 2 inst/doc/memshare.html | 4 src/altrep.cpp | 5 src/metadata.cpp | 2 src/register.cpp | 1 src/register.h | 1 src/retrieve.cpp | 8 - src/shared_memory.cpp | 13 + src/shared_memory.h | 11 + tests |only vignettes/memshare.Rmd | 2 19 files changed, 248 insertions(+), 207 deletions(-)
Title: Geospatial Tools for Visibility Analysis
Description: Provides tools for visibility analysis in geospatial data. It
offers functionality to perform isovist calculations, using arbitrary
geometries as both viewpoints and occluders.
Author: Claudiu Forgaci [aut, cre, cph] ,
Francesco Nattino [aut] ,
Netherlands eScience Center [fnd]
Maintainer: Claudiu Forgaci <c.forgaci@tudelft.nl>
Diff between visor versions 0.1.0 dated 2025-04-07 and 0.1.1 dated 2025-12-05
DESCRIPTION | 18 ++++++++++-------- MD5 | 14 +++++++------- NEWS.md | 10 +++++++++- R/isovist.R | 16 +++++++++++++--- README.md | 4 +++- build/vignette.rds |binary man/figures/logo.png |binary tests/testthat/test-isovist.R | 11 +++++++++++ 8 files changed, 53 insertions(+), 20 deletions(-)
Title: Triangulate and Simplify 3D Terrain Meshes
Description: Provides triangulations of regular height fields, based on the methods described in "Fast Polygonal Approximation of Terrains and Height Fields" Michael Garland and Paul S. Heckbert (1995) <https://www.mgarland.org/files/papers/scape.pdf> using code from the 'hmm' library written by Michael Fogleman <https://github.com/fogleman/hmm>.
Author: Tyler Morgan-Wall [aut, cph, cre] ,
Michael Fogleman [ctb, cph]
Maintainer: Tyler Morgan-Wall <tylermw@gmail.com>
Diff between terrainmeshr versions 0.1.0 dated 2020-04-29 and 1.0.1 dated 2025-12-05
terrainmeshr-0.1.0/terrainmeshr/R/RcppExports.R |only terrainmeshr-0.1.0/terrainmeshr/src/RcppExports.cpp |only terrainmeshr-1.0.1/terrainmeshr/DESCRIPTION | 22 -- terrainmeshr-1.0.1/terrainmeshr/MD5 | 31 ++- terrainmeshr-1.0.1/terrainmeshr/NAMESPACE | 2 terrainmeshr-1.0.1/terrainmeshr/R/terrainmeshr-package.R | 1 terrainmeshr-1.0.1/terrainmeshr/R/terrainmeshrRcpp.R | 1 terrainmeshr-1.0.1/terrainmeshr/R/triangulate_matrix.R | 52 +++-- terrainmeshr-1.0.1/terrainmeshr/README.md |only terrainmeshr-1.0.1/terrainmeshr/man/figures |only terrainmeshr-1.0.1/terrainmeshr/src/heightmap.cpp | 1 terrainmeshr-1.0.1/terrainmeshr/src/heightmap.h | 3 terrainmeshr-1.0.1/terrainmeshr/src/triangular_mesh.cpp | 150 +++++++++++---- 13 files changed, 178 insertions(+), 85 deletions(-)
Title: Judd, McClelland, & Ryan Formatting for ANOVA Output
Description: Produces ANOVA tables in the format used by Judd, McClelland,
and Ryan (2017, ISBN: 978-1138819832) in their introductory textbook,
Data Analysis. This includes proportional reduction in error and
formatting to improve ease the transition between the book and R.
Author: Adam Blake [cre, aut] ,
Jeff Chrabaszcz [aut],
Ji Son [aut] ,
Jim Stigler [aut]
Maintainer: Adam Blake <adam@coursekata.org>
Diff between supernova versions 3.0.0 dated 2024-02-07 and 3.0.1 dated 2025-12-05
DESCRIPTION | 23 +-- MD5 | 45 +++---- NEWS.md | 17 ++ R/generate_models.R | 21 +++ R/pairwise.R | 32 ++--- R/supernova.R | 18 +- R/utils-formula.R | 61 +++++++++- R/utils.R | 5 README.md | 8 - inst/WORDLIST | 3 man/anova_tbl.Rd | 2 man/find_bars.Rd |only man/level_pairs.Rd | 5 man/new_pairwise_tbl.Rd | 2 man/no_bars.Rd |only man/normalize_term.Rd |only man/row_blank.Rd | 2 man/row_error.Rd | 6 man/row_term.Rd | 6 man/supernova.Rd | 4 tests/testthat/_snaps/pairwise/bonferroni-one-variable.svg | 2 tests/testthat/_snaps/pairwise/multiple-plots-term-factor-am.svg | 2 tests/testthat/_snaps/pairwise/multiple-plots-term-factor-cyl.svg | 2 tests/testthat/_snaps/pairwise/t-test-one-variable.svg | 2 tests/testthat/_snaps/pairwise/tukey-one-variable.svg | 2 25 files changed, 183 insertions(+), 87 deletions(-)
Title: Syntax Highlighter
Description: Syntax highlighter for R code based on the results of the R
parser. Rendering in HTML and latex markup. Custom Sweave driver
performing syntax highlighting of R code chunks.
Author: Hadley Wickham [cre],
Romain Francois [aut],
Andre Simon [ctb]
Maintainer: Hadley Wickham <hadley@rstudio.com>
Diff between highlight versions 0.5.1 dated 2023-01-18 and 0.5.2 dated 2025-12-05
highlight-0.5.1/highlight/NEWS |only highlight-0.5.2/highlight/DESCRIPTION | 8 highlight-0.5.2/highlight/MD5 | 59 highlight-0.5.2/highlight/NEWS.md | 105 + highlight-0.5.2/highlight/R/00_sizes.R | 15 highlight-0.5.2/highlight/R/SweaveLatexDriver.R | 1019 ++++++++-------- highlight-0.5.2/highlight/R/css.R | 249 +-- highlight-0.5.2/highlight/R/detectives.R | 91 - highlight-0.5.2/highlight/R/external_highlight.R | 295 ++-- highlight-0.5.2/highlight/R/highlight.R | 285 ++-- highlight-0.5.2/highlight/R/renderer.R | 772 ++++++------ highlight-0.5.2/highlight/R/utils.R | 50 highlight-0.5.2/highlight/R/zzz.R | 15 highlight-0.5.2/highlight/README.md | 4 highlight-0.5.2/highlight/man/HighlightWeaveLatex.Rd | 20 highlight-0.5.2/highlight/man/Hweave.Rd | 14 highlight-0.5.2/highlight/man/boxes_latex.Rd | 6 highlight-0.5.2/highlight/man/css.parser.Rd | 30 highlight-0.5.2/highlight/man/external_highlight.Rd | 8 highlight-0.5.2/highlight/man/header_html.Rd | 12 highlight-0.5.2/highlight/man/header_latex.Rd | 3 highlight-0.5.2/highlight/man/highlight-package.Rd | 40 highlight-0.5.2/highlight/man/highlight.Rd | 30 highlight-0.5.2/highlight/man/renderer.Rd | 40 highlight-0.5.2/highlight/man/renderer_html.Rd | 22 highlight-0.5.2/highlight/man/renderer_latex.Rd | 16 highlight-0.5.2/highlight/man/simple_detective.Rd | 4 highlight-0.5.2/highlight/man/styler.Rd | 16 highlight-0.5.2/highlight/man/styler_assistant_latex.Rd | 8 highlight-0.5.2/highlight/src/Makevars | 1 highlight-0.5.2/highlight/src/Makevars.win | 1 31 files changed, 1817 insertions(+), 1421 deletions(-)
Title: Design and Analysis of Hierarchical Composite Endpoints
Description: Simulate and analyze hierarchical composite endpoints. Includes implementation for the kidney hierarchical composite endpoint as defined in Heerspink HL et al (2023) “Development and validation of a new hierarchical composite end point for clinical trials of kidney disease progression” (Journal of the American Society of Nephrology 34 (2): 2025–2038, <doi:10.1681/ASN.0000000000000243>). Win odds, also called Wilcoxon-Mann-Whitney or success odds, is the main analysis method. Other win statistics (win probability, win ratio, net benefit) are also implemented in the univariate case, provided there is no censoring. The win probability analysis is based on the Brunner-Munzel test and uses the DeLong-DeLong-Clarke-Pearson variance estimator, as described by Brunner and Konietschke (2025) in “An unbiased rank-based estimator of the Mann–Whitney variance including the case of ties” (Statistical Papers 66 (1): 20, <doi:10.1007/s00362-024-01635-0>). Includes implementation of a new [...truncated...]
Author: Samvel B. Gasparyan [aut, cre]
Maintainer: Samvel B. Gasparyan <gasparyan.co@gmail.com>
Diff between hce versions 0.8.5 dated 2025-08-22 and 0.8.8 dated 2025-12-05
DESCRIPTION | 10 - MD5 | 80 +++++++------- NAMESPACE | 1 NEWS.md | 42 +++++++ R/as_hce.R | 2 R/as_hce.data.frame.R | 2 R/as_hce.default.R | 4 R/calcWINS_data_frame.R | 135 ++++++++++++++++++------ R/calcWINS_formula.R | 8 + R/calcWINS_hce.R | 8 + R/data.R | 22 ++++ R/simHCE.R | 5 R/simKHCE.R | 144 +++++++++++++++++++------- R/simTTE.R |only R/summaryWO.R | 2 R/summaryWO_adhce.R | 40 ++++++- R/summaryWO_formula.R | 7 + R/summaryWO_hce.R | 6 - inst/doc/Introduction.R | 10 + inst/doc/Introduction.Rmd | 16 ++ inst/doc/Introduction.html | 105 ++++++++++++------- inst/doc/Wins.html | 19 +-- inst/doc/hce.R | 49 +++++++- inst/doc/hce.Rmd | 92 +++++++++++++--- inst/doc/hce.html | 246 +++++++++++++++++++++++++++++++-------------- inst/doc/maraca.html | 4 man/KHCE.Rd | 22 ++++ man/as_hce.Rd | 2 man/as_hce.default.Rd | 1 man/calcWINS.data.frame.Rd | 50 ++++++--- man/calcWINS.formula.Rd | 10 + man/calcWINS.hce.Rd | 10 + man/simHCE.Rd | 4 man/simKHCE.Rd | 36 +++++- man/simTTE.Rd |only man/summaryWO.Rd | 2 man/summaryWO.adhce.Rd | 21 +++ man/summaryWO.formula.Rd | 5 man/summaryWO.hce.Rd | 6 - vignettes/Introduction.Rmd | 16 ++ vignettes/REFERENCES.bib | 4 vignettes/hce.Rmd | 92 +++++++++++++--- 42 files changed, 1006 insertions(+), 334 deletions(-)
Title: Authoring Books and Technical Documents with R Markdown
Description: Output formats and utilities for authoring books and technical documents with R Markdown.
Author: Yihui Xie [aut, cre] ,
Christophe Dervieux [ctb] ,
JJ Allaire [ctb],
Albert Kim [ctb],
Alessandro Samuel-Rosa [ctb],
Andrzej Oles [ctb],
Atsushi Yasumoto [ctb] ,
Aust Frederik [ctb] ,
Bastiaan Quast [ctb],
Ben Marwick [ctb],
Chester Ismay [ctb],
Clif [...truncated...]
Maintainer: Yihui Xie <xie@yihui.name>
Diff between bookdown versions 0.45 dated 2025-10-03 and 0.46 dated 2025-12-05
DESCRIPTION | 10 ++--- MD5 | 8 ++-- R/publish.R | 85 ++++++++++++++++++++++++---------------------- man/publish_book.Rd | 36 ++++--------------- tests/testit/test-utils.R | 29 +-------------- 5 files changed, 66 insertions(+), 102 deletions(-)
Title: Functions for Time Series Analysis
Description: Nonparametric estimators and tests for time series analysis. The functions use bootstrap techniques and robust nonparametric difference-based estimators to test for the presence of possibly non-monotonic trends and for synchronicity of trends in multiple time series.
Author: Vyacheslav Lyubchich [aut, cre] ,
Yulia R. Gel [aut],
Alexander Brenning [ctb],
Calvin Chu [ctb],
Xin Huang [ctb],
Umar Islambekov [ctb],
Palina Niamkova [ctb],
Dorcas Ofori-Boateng [ctb],
Ethan D. Schaeffer [ctb],
Srishti Vishwakarma [aut],
Xingyu W [...truncated...]
Maintainer: Vyacheslav Lyubchich <lyubchich@umces.edu>
Diff between funtimes versions 9.1 dated 2023-03-21 and 10.0 dated 2025-12-05
funtimes-10.0/funtimes/DESCRIPTION | 17 - funtimes-10.0/funtimes/MD5 | 79 ++---- funtimes-10.0/funtimes/NAMESPACE | 13 - funtimes-10.0/funtimes/R/AuePolyReg_test.R | 2 funtimes-10.0/funtimes/R/GombayCPA_test.R | 2 funtimes-10.0/funtimes/R/VAR.R | 22 + funtimes-10.0/funtimes/R/VARselect.R | 22 + funtimes-10.0/funtimes/R/causality_pred.R | 109 ++++---- funtimes-10.0/funtimes/R/cumsumCPA_test.R | 2 funtimes-10.0/funtimes/R/fun_causality.R | 13 + funtimes-10.0/funtimes/R/fun_cusum.R | 16 + funtimes-10.0/funtimes/R/fun_trend.R |only funtimes-10.0/funtimes/R/fun_trust.R | 17 + funtimes-10.0/funtimes/R/funtimes.R | 1 funtimes-10.0/funtimes/R/notrend_test.R | 4 funtimes-10.0/funtimes/R/r_crit.R |only funtimes-10.0/funtimes/R/tails_i.R | 2 funtimes-10.0/funtimes/R/tails_q.R | 2 funtimes-10.0/funtimes/R/toMlm.R | 29 +- funtimes-10.0/funtimes/build/partial.rdb |binary funtimes-10.0/funtimes/build/vignette.rds |binary funtimes-10.0/funtimes/inst/doc/beales.R | 8 funtimes-10.0/funtimes/inst/doc/beales.html | 111 ++++---- funtimes-10.0/funtimes/inst/doc/trendtests.R | 10 funtimes-10.0/funtimes/inst/doc/trendtests.html | 228 ++++++++--------- funtimes-10.0/funtimes/inst/doc/tsclusters.R | 16 - funtimes-10.0/funtimes/inst/doc/tsclusters.html | 281 +++++++++++----------- funtimes-10.0/funtimes/man/AuePolyReg_test.Rd | 2 funtimes-10.0/funtimes/man/GombayCPA_test.Rd | 2 funtimes-10.0/funtimes/man/causality_pred.Rd | 5 funtimes-10.0/funtimes/man/cumsumCPA_test.Rd | 2 funtimes-10.0/funtimes/man/funtimes-defunct.Rd | 74 ----- funtimes-10.0/funtimes/man/r_crit.Rd |only funtimes-10.0/funtimes/man/tails_i.Rd | 2 funtimes-10.0/funtimes/man/tails_q.Rd | 2 funtimes-9.1/funtimes/R/i.tails.R |only funtimes-9.1/funtimes/R/mcusum.test.R |only funtimes-9.1/funtimes/R/notrend.test.R |only funtimes-9.1/funtimes/R/q.tails.R |only funtimes-9.1/funtimes/R/sync.cluster.R |only funtimes-9.1/funtimes/R/sync.test.R |only funtimes-9.1/funtimes/R/wavk.test.R |only funtimes-9.1/funtimes/man/i.tails-defunct.Rd |only funtimes-9.1/funtimes/man/mcusum.test-defunct.Rd |only funtimes-9.1/funtimes/man/notrend.test-defunct.Rd |only funtimes-9.1/funtimes/man/q.tails-defunct.Rd |only funtimes-9.1/funtimes/man/sync.cluster-defunct.Rd |only funtimes-9.1/funtimes/man/sync.test-defunct.Rd |only funtimes-9.1/funtimes/man/wavk.test-defunct.Rd |only 49 files changed, 546 insertions(+), 549 deletions(-)