Title: Extra Twitter Bootstrap Components for Shiny
Description: Adds easy access to additional Twitter Bootstrap components to Shiny.
Author: Eric Bailey [aut],
Federico Marini [cre, ctb] ,
Jesse Koops [ctb]
Maintainer: Federico Marini <marinif@uni-mainz.de>
Diff between shinyBS versions 0.61.1 dated 2022-04-17 and 0.63.0 dated 2025-12-17
DESCRIPTION | 38 + MD5 | 137 +++--- NAMESPACE | 48 +- R/Alerts.R | 162 +++---- R/Buttons.R | 228 +++++----- R/Collapses.R | 142 +++--- R/Modals.R | 186 ++++---- R/Tooltips_and_Popovers.R | 330 +++++++-------- R/addPopover.R | 50 +- R/addTooltip.R | 48 +- R/bsAlert.R | 41 + R/bsButton.R | 110 ++--- R/bsCollapse.R | 86 ++-- R/bsCollapsePanel.R | 84 ++-- R/bsExample.R | 80 +-- R/bsModal.R | 105 ++--- R/bsPopover.R | 50 +- R/bsTooltip.R | 48 +- R/bsTypeahead.R |only R/closeAlert.R | 34 - R/createAlert.R | 60 +- R/misc.R | 84 +--- R/popify.R | 72 +-- R/removePopover.R | 34 - R/removeTooltip.R | 34 - R/tagManipulators.R |only R/tipify.R | 70 +-- R/toggleModal.R | 36 - R/updateButton.R | 72 +-- R/updateCollapse.R | 52 +- R/updateTypeahead.R |only inst/examples/Alerts/server.R | 44 +- inst/examples/Alerts/ui.R | 26 - inst/examples/Buttons/server.R | 98 ++-- inst/examples/Buttons/ui.R | 46 +- inst/examples/Collapses/server.R | 26 - inst/examples/Collapses/ui.R | 42 +- inst/examples/Modals/server.R | 66 +-- inst/examples/Modals/ui.R | 42 +- inst/examples/TooltipsandPopovers/server.R | 63 +-- inst/examples/TooltipsandPopovers/ui.R | 44 +- inst/tests/tipify_test.R | 70 +-- inst/tests/tipify_test2.R | 90 ++-- inst/www/bootstrap3-typeahead.js |only inst/www/shinyBS.css | 12 inst/www/shinyBS.js | 606 ++++++++++++++--------------- inst/www/typeahead_inputbinding.js |only man/Alerts.Rd | 196 ++++----- man/Buttons.Rd | 262 ++++++------ man/Collapses.Rd | 175 ++++---- man/Modals.Rd | 218 +++++----- man/Tooltips_and_Popovers.Rd | 269 ++++++------ man/addPopover.Rd | 107 ++--- man/addTooltip.Rd | 102 ++-- man/bsAlert.Rd | 65 +-- man/bsButton.Rd | 117 +++-- man/bsCollapse.Rd | 81 +-- man/bsCollapsePanel.Rd | 72 +-- man/bsExample.Rd | 63 +-- man/bsModal.Rd | 90 ++-- man/bsPopover.Rd | 102 ++-- man/bsTooltip.Rd | 91 ++-- man/bsTypeahead.Rd |only man/closeAlert.Rd | 66 +-- man/createAlert.Rd | 102 ++-- man/popify.Rd | 104 ++-- man/removePopover.Rd | 74 +-- man/removeTooltip.Rd | 74 +-- man/tipify.Rd | 92 ++-- man/toggleModal.Rd | 68 +-- man/updateButton.Rd | 118 +++-- man/updateCollapse.Rd | 88 ++-- man/updateTypeahead.Rd |only 73 files changed, 3391 insertions(+), 3201 deletions(-)
Title: Retrieve, Harmonise and Map Open Data Regarding the Italian
School System
Description: Compiles and displays the available data sets regarding the Italian school system, with a focus on the infrastructural aspects.
Input datasets are downloaded from the web, with the aim of updating everything to real time.
The functions are divided in four main modules, namely
'Get', to scrape raw data from the web
'Util', various utilities needed to process raw data
'Group', to aggregate data at the municipality or province level
'Map', to visualize the output datasets.
Author: Leonardo Cefalo [aut, cre] ,
Alessio Pollice [ctb, ths] ,
Paolo Maranzano [ctb]
Maintainer: Leonardo Cefalo <leonardo.cefalo@uniba.it>
Diff between SchoolDataIT versions 0.2.10 dated 2025-11-28 and 0.2.12 dated 2025-12-17
DESCRIPTION | 11 - MD5 | 52 ++--- NEWS.md | 12 + R/Get_AdmUnNames.R | 9 - R/Get_BroadBand.R | 2 R/Get_DB_MIUR.R | 53 +++--- R/Get_Invalsi_IS.R | 309 ++++++++++++++++------------------- R/Get_Registry.R | 6 R/Get_School2mun.R | 4 R/Get_nstud.R | 30 ++- R/Get_nteachers_prov.R | 11 - R/Group_teachers4stud.R | 2 R/Map_DB.R | 4 R/Map_Invalsi.R | 4 R/Map_School_Buildings.R | 4 R/Util_Check_nstud_availability.R | 8 README.md | 2 man/Get_AdmUnNames.Rd | 9 - man/Get_DB_MIUR.Rd | 7 man/Get_Invalsi_IS.Rd | 13 - man/Get_Registry.Rd | 2 man/Get_nteachers_prov.Rd | 15 - man/Group_teachers4stud.Rd | 2 man/Map_DB.Rd | 4 man/Map_Invalsi.Rd | 4 man/Map_School_Buildings.Rd | 4 man/Util_Check_nstud_availability.Rd | 6 27 files changed, 324 insertions(+), 265 deletions(-)
Title: eBird Data Extraction and Processing in R
Description: Extract and process bird sightings records from
eBird (<http://ebird.org>), an online tool for recording bird
observations. Public access to the full eBird database is via the
eBird Basic Dataset (EBD; see <http://ebird.org/ebird/data/download>
for access), a downloadable text file. This package is an interface to
AWK for extracting data from the EBD based on taxonomic, spatial, or
temporal filters, to produce a manageable file size that can be
imported into R.
Author: Matthew Strimas-Mackey [aut, cre] ,
Eliot Miller [aut],
Wesley Hochachka [aut],
Cornell Lab of Ornithology [cph]
Maintainer: Matthew Strimas-Mackey <mes335@cornell.edu>
Diff between auk versions 0.8.2 dated 2025-06-20 and 0.9.0 dated 2025-12-17
DESCRIPTION | 10 - MD5 | 142 +++++++++--------- NEWS.md | 4 R/auk-bbox.R | 8 - R/auk-bcr.R | 4 R/auk-breeding.R | 4 R/auk-complete.R | 4 R/auk-country.R | 4 R/auk-county.R | 4 R/auk-date.R | 12 - R/auk-distance.R | 4 R/auk-duration.R | 4 R/auk-filter.R | 16 +- R/auk-last-edited.R | 6 R/auk-observer.R | 4 R/auk-project.R | 4 R/auk-protocol.R | 4 R/auk-rollup.R | 8 - R/auk-species.R | 8 - R/auk-state.R | 4 R/auk-time.R | 4 R/auk-version.R | 6 R/auk-year.R | 10 - R/format-unmarked-occu.R | 6 R/process_barcharts.R | 3 R/read.R | 2 R/utils.R | 10 - build/vignette.rds |binary data/ebird_taxonomy.rda |binary inst/doc/auk.R | 78 +++++----- inst/doc/auk.Rmd | 82 +++++----- inst/doc/auk.html | 101 +++++++------ inst/doc/development.Rmd | 2 inst/doc/development.html | 7 inst/extdata/barchart-sample.txt | 248 +++++++++++++++++---------------- man/auk_bbox.Rd | 4 man/auk_bcr.Rd | 4 man/auk_breeding.Rd | 4 man/auk_complete.Rd | 4 man/auk_country.Rd | 4 man/auk_county.Rd | 4 man/auk_date.Rd | 12 - man/auk_distance.Rd | 4 man/auk_duration.Rd | 4 man/auk_extent.Rd | 4 man/auk_filter.Rd | 14 - man/auk_last_edited.Rd | 4 man/auk_observer.Rd | 4 man/auk_project.Rd | 4 man/auk_protocol.Rd | 4 man/auk_rollup.Rd | 8 - man/auk_species.Rd | 4 man/auk_state.Rd | 4 man/auk_time.Rd | 4 man/auk_year.Rd | 10 - man/format_unmarked_occu.Rd | 6 man/read_ebd.Rd | 2 tests/testthat/test_auk-ebd-version.r | 2 tests/testthat/test_auk-ebd.r | 168 +++++++++++----------- tests/testthat/test_auk-filter.r | 62 ++++---- tests/testthat/test_auk-keep-drop.r | 40 ++--- tests/testthat/test_auk-rollup.r | 8 - tests/testthat/test_auk-select.r | 14 - tests/testthat/test_auk-split.r | 6 tests/testthat/test_auk-unique.r | 20 +- tests/testthat/test_auk-zerofill.r | 4 tests/testthat/test_ebird-species.r | 1 tests/testthat/test_filters.r | 68 ++++----- tests/testthat/test_filters_sampling.r | 44 ++--- tests/testthat/test_unmarked.r | 28 +-- vignettes/auk.Rmd | 82 +++++----- vignettes/development.Rmd | 2 72 files changed, 750 insertions(+), 732 deletions(-)
Title: 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra
Library
Description: 'Armadillo' is a templated C++ linear algebra library aiming towards
a good balance between speed and ease of use. It provides high-level syntax and
functionality deliberately similar to Matlab. It is useful for algorithm development
directly in C++, or quick conversion of research code into production environments.
It provides efficient classes for vectors, matrices and cubes where dense and sparse
matrices are supported. Integer, floating point and complex numbers are supported.
A sophisticated expression evaluator (based on template meta-programming) automatically
combines several operations to increase speed and efficiency. Dynamic evaluation
automatically chooses optimal code paths based on detected matrix structures.
Matrix decompositions are provided through integration with LAPACK, or one of its
high performance drop-in replacements (such as 'MKL' or 'OpenBLAS'). It can
automatically use 'OpenMP' multi-threading (parallelisation) to speed up
computationally expensive operations [...truncated...]
Author: Dirk Eddelbuettel [aut, cre] ,
Romain Francois [aut] ,
Doug Bates [aut] ,
Binxiang Ni [aut],
Conrad Sanderson [aut]
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between RcppArmadillo versions 15.2.2-1 dated 2025-11-22 and 15.2.3-1 dated 2025-12-17
ChangeLog | 18 ++++ DESCRIPTION | 8 +- MD5 | 24 +++--- README.md | 36 +++++++++ configure | 18 ++-- configure.ac | 2 inst/NEWS.Rd | 10 ++ inst/doc/RcppArmadillo-intro.pdf |binary inst/doc/RcppArmadillo-sparseMatrix.pdf |binary inst/include/current/armadillo_bits/Mat_meat.hpp | 66 ++++++++++------- inst/include/current/armadillo_bits/arma_version.hpp | 2 inst/include/current/armadillo_bits/op_repmat_meat.hpp | 20 +++-- inst/include/current/armadillo_bits/op_resize_meat.hpp | 2 13 files changed, 146 insertions(+), 60 deletions(-)
Title: Neighbourhood Functions for Local-Search Algorithms
Description: Neighbourhood functions are key components of
local-search algorithms such as Simulated Annealing or
Threshold Accepting. These functions take a solution and
return a slightly-modified copy of it, i.e. a neighbour.
The package provides a function neighbourfun() that
constructs such neighbourhood functions, based on
parameters such as admissible ranges for elements in a
solution. Supported are numeric and logical solutions.
The algorithms were originally created for
portfolio-optimisation applications, but can be used for
other models as well. Several recipes for neighbour
computations are taken from "Numerical Methods and
Optimization in Finance" by M. Gilli, D. Maringer and
E. Schumann (2019, ISBN:978-0128150658).
Author: Enrico Schumann [aut, cre]
Maintainer: Enrico Schumann <es@enricoschumann.net>
Diff between neighbours versions 0.1-3 dated 2023-09-21 and 0.1-5 dated 2025-12-17
ChangeLog | 18 ++++++++++++++++++ DESCRIPTION | 13 +++++++------ MD5 | 30 +++++++++++++++--------------- NEWS | 10 ++++++++++ R/neighbourfun.R | 6 +++++- README.md | 9 +++++---- build/partial.rdb |binary build/vignette.rds |binary inst/doc/neighbours.Rnw | 5 ++--- inst/doc/neighbours.bib | 2 +- inst/doc/neighbours.pdf |binary inst/tinytest/test_neighbours.R | 32 ++++++++++++++++++++++++++++++-- man/neighbourfun.Rd | 4 ++-- tests/tinytest.R | 7 ++++--- vignettes/neighbours.Rnw | 5 ++--- vignettes/neighbours.bib | 2 +- 16 files changed, 102 insertions(+), 41 deletions(-)
Title: Diagnostics for Lists of Codes Based on Measurements
Description: Diagnostics of list of codes based on concepts from the domains measurement and observation. This package works for data mapped to the Observational Medical Outcomes Partnership Common Data Model.
Author: Edward Burn [aut] ,
Nuria Mercade-Besora [aut, cre] ,
Marta Alcalde-Herraiz [aut]
Maintainer: Nuria Mercade-Besora <nuria.mercadebesora@ndorms.ox.ac.uk>
Diff between MeasurementDiagnostics versions 0.1.0 dated 2025-07-29 and 0.2.0 dated 2025-12-17
MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/R/plotMeasurementTimings.R |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/R/tableMeasurementTimings.R |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/R/utils.R |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/man/pipe.Rd |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/man/plotMeasurementTimings.Rd |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/man/plotMeasurementValueAsNumeric.Rd |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/man/tableMeasurementTimings.Rd |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/man/tableMeasurementValueAsNumeric.Rd |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/tests/testthat/test-plotMeasurementTimings.R |only MeasurementDiagnostics-0.1.0/MeasurementDiagnostics/tests/testthat/test-tableMeasurementTimings.R |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/DESCRIPTION | 22 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/MD5 | 90 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/NAMESPACE | 30 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/MeasurementDiagnostics-package.R |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/documentationHelpers.R | 196 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/mockMeasurementDiagnostics.R | 156 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/plotMeasurementSummary.R |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/plotMeasurementValueAsConcept.R | 136 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/plotMeasurementValueAsNumeric.R | 217 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/summariseCohortMeasurementUse.R | 129 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/summariseMeasurementUse.R | 1436 +- MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/tableMeasurementSummary.R |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/tableMeasurementValueAsConcept.R | 181 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/R/tableMeasurementValueAsNumeric.R | 196 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/README.md | 188 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/build/vignette.rds |binary MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/inst/doc/summariseMeasurementUse.R | 108 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/inst/doc/summariseMeasurementUse.Rmd | 180 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/inst/doc/summariseMeasurementUse.html | 4952 +++++----- MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/MeasurementDiagnostics-package.Rd |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/mockMeasurementDiagnostics.Rd | 74 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/plotDoc.Rd | 54 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/plotMeasurementSummary.Rd |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/plotMeasurementValueAsConcept.Rd | 106 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/plotMeasurementValueAsNumber.Rd |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/resultDoc.Rd | 24 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/summariseCohortMeasurementUse.Rd | 167 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/summariseMeasurementDoc.Rd | 90 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/summariseMeasurementUse.Rd | 164 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/tableDoc.Rd | 67 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/tableMeasurementSummary.Rd |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/tableMeasurementValueAsConcept.Rd | 126 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/tableMeasurementValueAsNumber.Rd |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/timeScaleDoc.Rd | 24 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/man/uniqueCombinationsDoc.Rd | 26 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat.R | 8 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/setup.R | 575 - MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-plotMeasurementSummary.R |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-plotMeasurementValueAsConcept.R | 42 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-plotMeasurementValueAsNumeric.R | 66 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-summariseCohortMeasurementUse.R | 675 - MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-summariseMeasurementUse.R | 668 - MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-tableMeasurementSummary.R |only MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-tableMeasurementValueAsConcept.R | 111 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/tests/testthat/test-tableMeasurementValueAsNumeric.R | 110 MeasurementDiagnostics-0.2.0/MeasurementDiagnostics/vignettes/summariseMeasurementUse.Rmd | 180 56 files changed, 6147 insertions(+), 5427 deletions(-)
More information about MeasurementDiagnostics at CRAN
Permanent link
Title: Multiplicative Interaction Models Diagnostics and Visualization
Description: Performs diagnostic tests of multiplicative interaction models and plots non-linear marginal effects of a treatment on an outcome across different values of a moderator.
Author: Jens Hainmueller [aut, ctb],
Jonathan Mummolo [aut, ctb],
Yiqing Xu [aut, cre],
Ziyi Liu [aut, ctb]
Maintainer: Yiqing Xu <yiqingxu@stanford.edu>
Diff between interflex versions 1.2.6 dated 2021-05-18 and 1.2.8 dated 2025-12-17
interflex-1.2.6/interflex/README.md |only interflex-1.2.8/interflex/DESCRIPTION | 20 ++++++++++---------- interflex-1.2.8/interflex/MD5 | 7 +++---- interflex-1.2.8/interflex/src/Makevars | 12 +----------- interflex-1.2.8/interflex/src/Makevars.win | 12 +----------- 5 files changed, 15 insertions(+), 36 deletions(-)
Title: Access Data from the 'Impect' API
Description: Pull data from the 'Impect' Customer API <https://glossary.impect.com/api-design>. The package can retrieve data such as events or match sums.
Author: Impect GmbH [cph],
Florian Schmitt [aut, cre],
Thomas Walentin [ctb]
Maintainer: Florian Schmitt <florian.schmitt@impect.com>
Diff between impectR versions 2.5.2 dated 2025-10-17 and 2.5.3 dated 2025-12-17
DESCRIPTION | 6 ++--- MD5 | 8 +++---- NEWS.md | 5 ++++ R/getPlayerIterationAverages.R | 42 ++++++++++++++++++++++++----------------- README.md | 6 ++--- 5 files changed, 40 insertions(+), 27 deletions(-)
More information about algebraic.dist at CRAN
Permanent link
Title: Utilities for Handling Strings and Text
Description: Utilities for handling character vectors
that store human-readable text (either plain or with
markup, such as HTML or LaTeX). The package provides,
in particular, functions that help with the
preparation of plain-text reports, e.g. for expanding
and aligning strings that form the lines of such
reports. The package also provides generic functions for
transforming R objects to HTML and to plain text.
Author: Enrico Schumann [aut, cre]
Maintainer: Enrico Schumann <es@enricoschumann.net>
Diff between textutils versions 0.4-2 dated 2025-04-01 and 0.4-3 dated 2025-12-17
DESCRIPTION | 11 ++++++----- MD5 | 14 +++++++------- NEWS | 4 ++++ build/partial.rdb |binary build/vignette.rds |binary inst/doc/btable.Rnw | 4 ++-- inst/doc/btable.pdf |binary vignettes/btable.Rnw | 4 ++-- 8 files changed, 21 insertions(+), 16 deletions(-)
Title: Translate CSS Selectors to XPath Expressions
Description: Translates a CSS selector into an equivalent XPath
expression. This allows us to use CSS selectors when working with
the XML package as it can only evaluate XPath expressions. Also
provided are convenience functions useful for using CSS selectors on
XML nodes. This package is a port of the Python package 'cssselect'
(<https://cssselect.readthedocs.io/>).
Author: Simon Potter [aut, trl, cre],
Simon Sapin [aut],
Ian Bicking [aut]
Maintainer: Simon Potter <simon@sjp.co.nz>
Diff between selectr versions 0.5-0 dated 2025-11-21 and 0.5-1 dated 2025-12-17
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- R/parser.R | 8 ++++---- inst/NEWS.Rd | 15 +++++++++++++++ tests/testthat/test-translation.R | 20 ++++++++++++++++++++ 5 files changed, 46 insertions(+), 11 deletions(-)
Title: Implements Pseudo-R2D2 Prior for Ordinal Regression
Description: Implements the pseudo-R2D2 prior for ordinal regression from the paper "Pseudo-R2D2 prior for high-dimensional ordinal regression" by Yanchenko (2025) <doi:10.1007/s11222-025-10667-x>. In particular, it provides code to evaluate the probability distribution function for the cut-points, compute the log-likelihood, calculate the hyper-parameters for the global variance parameter, find the distribution of McFadden's coefficient-of-determination, and fit the model in 'rstan'. Please cite the paper if you use these codes.
Author: Eric Yanchenko [aut, cre]
Maintainer: Eric Yanchenko <eyanchenko@aiu.ac.jp>
Diff between R2D2ordinal versions 1.0.1 dated 2025-03-18 and 1.0.2 dated 2025-12-17
DESCRIPTION | 8 MD5 | 26 +- R/functions.R | 68 +++-- R/ord_r2d2.R | 5 inst/doc/overview.html | 11 inst/stan/r2d2ord.stan | 6 man/dcut.Rd | 2 man/find_param.Rd | 2 man/llike.Rd | 2 man/ord_r2d2.Rd | 5 src/stanExports_r2d2ord.h | 150 ++++++++----- vignettes/overview_files/figure-html/unnamed-chunk-4-1.png |binary vignettes/overview_files/figure-html/unnamed-chunk-4-2.png |binary vignettes/overview_files/figure-html/unnamed-chunk-4-3.png |binary 14 files changed, 169 insertions(+), 116 deletions(-)
Title: Scraper for National Hockey League Data
Description: Scrapes and cleans data from the 'NHL' and 'ESPN' APIs into data.frames and lists. Wraps 125+ endpoints documented in <https://github.com/RentoSaijo/nhlscraper/wiki> from high-level multi-season summaries and award winners to low-level decisecond replays and bookmakers' odds, making them more accessible. Features cleaning and visualization tools, primarily for play-by-plays.
Author: Rento Saijo [aut, cre, cph] ,
Lars Skytte [ctb]
Maintainer: Rento Saijo <rentosaijo0527@gmail.com>
Diff between nhlscraper versions 0.4.0 dated 2025-11-30 and 0.4.1 dated 2025-12-17
DESCRIPTION | 6 +- MD5 | 42 +++++++-------- NEWS.md | 5 + R/Award.R | 30 +++++++---- R/Coach.R | 49 ++++++++++++------ R/Draft.R | 148 +++++++++++++++++++++++++++++++++++-------------------- R/ESPNGame.R | 1 R/ESPNOther.R | 17 ++++-- R/ESPNPlayer.R | 39 ++++++++------ R/ESPNTeam.R | 39 ++++++++------ R/Event.R | 18 ++++-- R/Franchise.R | 129 ++++++++++++++++++++++++++++++------------------ R/Game.R | 17 ++++-- R/Goalie.R | 152 +++++++++++++++++++++++++++++++++++++-------------------- R/League.R | 88 ++++++++++++++++++++++----------- R/Manager.R | 14 +++-- R/Official.R | 13 +++- R/Other.R | 39 ++++++++++---- R/Player.R | 28 +++++++--- R/Playoff.R | 35 ++++++++----- R/Skater.R | 109 ++++++++++++++++++++++++++++------------ R/Team.R | 71 +++++++++++++++++--------- 22 files changed, 706 insertions(+), 383 deletions(-)
Title: Translate Words or Sentences via Online Translators
Description: Useful functions to translate text for multiple languages using online translators.
For example, by translating error messages and descriptive analysis results into a language familiar
to the user, it enables a better understanding of the information, thereby reducing the barriers caused by language.
It offers several helper functions to query gene information to help interpretation of interested genes (e.g., marker genes, differential expression genes),
and provides utilities to translate 'ggplot' graphics. This package is not affiliated with any of the online translators.
The developers do not take responsibility for the invoice it incurs when using this package, especially for exceeding the free quota.
Author: Guangchuang Yu [aut, cre, cph] ,
Guannan Chen [ctb],
Difei Wang [ctb]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between fanyi versions 0.0.8 dated 2025-08-28 and 0.0.9 dated 2025-12-17
DESCRIPTION | 8 - MD5 | 16 +-- NAMESPACE | 2 NEWS.md | 4 R/deepseek.r | 195 ++++++++++++++++++++++++++++++-------------- R/qwen.r | 2 R/translate.r | 6 + man/set-translate-option.Rd | 2 man/translate.Rd | 2 9 files changed, 161 insertions(+), 76 deletions(-)
More information about customknitrender at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-01-24 0.30.0
2024-11-10 0.29.0
2024-07-25 0.28.0
2023-04-05 0.27.1
2021-03-19 0.26.0
2020-02-05 0.24.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-12-31 1.2
2015-10-02 1.1
2015-10-01 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-01-22 0.3.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-10-11 0.3.1
2023-11-15 0.3.0
2023-10-14 0.2.11
2023-08-22 0.2.10
2023-06-24 0.2.9
2023-04-14 0.2.8
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-11-17 1.0.6
2025-08-25 1.0.5
2025-04-28 1.0.4
2025-04-01 1.0.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-07-06 0.1.4
2025-04-05 0.1.3
2025-02-18 0.1.2
2025-02-15 0.1.1
2024-12-19 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-09-17 1.1.0
2023-04-18 1.0.4
Title: Running Local LLMs with 'llama.cpp' Backend
Description: Provides R bindings to the 'llama.cpp' library for running large language models.
The package uses a lightweight architecture where the C++ backend library is downloaded
at runtime rather than bundled with the package.
Package features include text generation, reproducible generation, and parallel inference.
Author: Eddie Yang [aut] ,
Yaosheng Xu [aut, cre]
Maintainer: Yaosheng Xu <xu2009@purdue.edu>
Diff between localLLM versions 1.0.1 dated 2025-10-15 and 1.1.0 dated 2025-12-17
localLLM-1.0.1/localLLM/src/Makevars |only localLLM-1.0.1/localLLM/src/Makevars.win |only localLLM-1.1.0/localLLM/DESCRIPTION | 23 localLLM-1.1.0/localLLM/MD5 | 73 localLLM-1.1.0/localLLM/NAMESPACE | 13 localLLM-1.1.0/localLLM/R/annotations.R |only localLLM-1.1.0/localLLM/R/api.R | 755 ++++++++-- localLLM-1.1.0/localLLM/R/capacity.R |only localLLM-1.1.0/localLLM/R/documentation.R |only localLLM-1.1.0/localLLM/R/hash_utils.R |only localLLM-1.1.0/localLLM/R/install.R | 12 localLLM-1.1.0/localLLM/R/ollama.R |only localLLM-1.1.0/localLLM/R/quick_llama.R | 290 ++- localLLM-1.1.0/localLLM/R/zzz.R | 4 localLLM-1.1.0/localLLM/README.md |only localLLM-1.1.0/localLLM/build |only localLLM-1.1.0/localLLM/inst |only localLLM-1.1.0/localLLM/man/annotation_sink_csv.Rd |only localLLM-1.1.0/localLLM/man/compute_confusion_matrices.Rd |only localLLM-1.1.0/localLLM/man/document_end.Rd |only localLLM-1.1.0/localLLM/man/document_start.Rd |only localLLM-1.1.0/localLLM/man/explore.Rd |only localLLM-1.1.0/localLLM/man/generate.Rd | 7 localLLM-1.1.0/localLLM/man/generate_parallel.Rd | 7 localLLM-1.1.0/localLLM/man/hardware_profile.Rd |only localLLM-1.1.0/localLLM/man/intercoder_reliability.Rd |only localLLM-1.1.0/localLLM/man/list_ollama_models.Rd |only localLLM-1.1.0/localLLM/man/quick_llama.Rd | 5 localLLM-1.1.0/localLLM/man/validate.Rd |only localLLM-1.1.0/localLLM/src/interface.cpp | 139 + localLLM-1.1.0/localLLM/tests/testthat/test-annotations.R |only localLLM-1.1.0/localLLM/tests/testthat/test-documentation.R |only localLLM-1.1.0/localLLM/tests/testthat/test-irr-comparison.R |only localLLM-1.1.0/localLLM/tests/testthat/test-ollama.R |only localLLM-1.1.0/localLLM/tests/testthat/test-quick-llama-helpers.R | 50 localLLM-1.1.0/localLLM/tests/testthat/test-validate.R |only localLLM-1.1.0/localLLM/vignettes |only 37 files changed, 1102 insertions(+), 276 deletions(-)
Title: Scientific Journal and Sci-Fi Themed Color Palettes for
'ggplot2'
Description: A collection of 'ggplot2' color palettes inspired by
plots in scientific journals, data visualization libraries,
science fiction movies, and TV shows.
Author: Nan Xiao [aut, cre, cph] ,
Joshua Cook [ctb],
Clara Jegousse [ctb],
Hui Chen [ctb],
Miaozhu Li [ctb],
iTerm2-Color-Schemes contributors [ctb, cph] ,
Winston Chang [ctb, cph]
Maintainer: Nan Xiao <me@nanx.me>
Diff between ggsci versions 4.1.0 dated 2025-10-25 and 4.2.0 dated 2025-12-17
DESCRIPTION | 6 - MD5 | 28 ++++---- NEWS.md | 11 +++ R/continuous-bs5.R | 36 ++++++----- R/continuous-material.R | 44 +++++++------ R/continuous-tw3.R | 44 +++++++------ R/discrete-cosmic.R | 15 ++-- R/discrete-uchicago.R | 4 - R/palettes-iterm.R | 152 ++++++++++++++++++++++++++++++++++++++++++++++++ build/vignette.rds |binary inst/doc/ggsci.Rmd | 2 inst/doc/ggsci.html | 2 man/pal_uchicago.Rd | 2 man/scale_uchicago.Rd | 2 vignettes/ggsci.Rmd | 2 15 files changed, 264 insertions(+), 86 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-01-26 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-05-17 2.0.9
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-12-03 1.2.6
2022-09-08 1.2.5
2021-09-22 1.2.4
2021-06-09 1.2.3
2021-05-13 1.2.2
2021-05-07 1.2.1
2021-03-10 1.2.0
2020-10-24 1.1.0
2020-06-19 1.0.5
2020-06-17 1.0.4
2020-03-16 1.0.3
2020-03-03 1.0.2
2019-12-17 1.0.1
2019-11-06 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-03-30 1.1.3
2023-01-28 1.1.2
2021-05-13 1.1.1
2020-10-25 1.1.0
2020-01-13 1.0.1
2019-09-07 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-01-26 1.2.1
2023-12-17 1.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-12-15 1.1.0
2022-04-07 1.0.0
2022-01-15 0.1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-04-07 0.6.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-08-21 0.99.7
2023-01-13 0.99.6
2022-11-20 0.99.3
2022-06-24 0.99.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-10-14 1.2.4
2021-06-09 1.2.3
2021-05-13 1.2.2
2021-05-06 1.2.1
2021-03-09 1.2.0
2020-10-23 1.1.0
2020-04-23 1.0.8
2020-03-16 1.0.7
2020-03-03 1.0.6
2020-03-02 1.0.5
2019-12-15 1.0.3
2019-10-28 1.0.1
2019-10-28 1.0.2
2019-07-03 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-04-14 0.3.2
Title: Functions for University of Auckland Course STATS 201/208 Data
Analysis
Description: A set of functions used in teaching STATS 201/208 Data Analysis at
the University of Auckland. The functions are designed to make parts of R more
accessible to a large undergraduate population who are mostly not statistics
majors.
Author: Brant Deppa [aut] ,
James Curran [aut, cre] ,
Hannah Yun [ctb],
Rachel Fewster [ctb],
Russell Millar [ctb],
Ben Stevenson [ctb],
Andrew Balemi [ctb],
Chris Wild [ctb],
Sophie Jones [ctb],
Dineika Chandra [ctr],
Brendan McArdle [ctr]
Maintainer: James Curran <j.curran@auckland.ac.nz>
Diff between s20x versions 3.1-40 dated 2023-08-21 and 3.2.1 dated 2025-12-17
s20x-3.1-40/s20x/data/fruitfly.df.rda |only s20x-3.2.1/s20x/DESCRIPTION | 15 + s20x-3.2.1/s20x/MD5 | 238 ++++++++++++++++++--------- s20x-3.2.1/s20x/NAMESPACE | 9 + s20x-3.2.1/s20x/R/casestudy.R |only s20x-3.2.1/s20x/R/ciReg.R | 86 ++++----- s20x-3.2.1/s20x/R/listCaseStudies.R |only s20x-3.2.1/s20x/R/openCaseStudy.R |only s20x-3.2.1/s20x/R/s20x-package.R | 2 s20x-3.2.1/s20x/inst/case_studies |only s20x-3.2.1/s20x/inst/extdata |only s20x-3.2.1/s20x/man/airpass.df.Rd | 28 +-- s20x-3.2.1/s20x/man/apples.df.Rd | 66 +++---- s20x-3.2.1/s20x/man/arousal.df.Rd | 40 ++-- s20x-3.2.1/s20x/man/autocorPlot.Rd | 72 ++++---- s20x-3.2.1/s20x/man/beer.df.Rd | 28 +-- s20x-3.2.1/s20x/man/body.df.Rd | 40 ++-- s20x-3.2.1/s20x/man/books.df.Rd | 46 ++--- s20x-3.2.1/s20x/man/boxqq.Rd | 88 +++++----- s20x-3.2.1/s20x/man/bursary.df.Rd | 36 ++-- s20x-3.2.1/s20x/man/butterfat.df.Rd | 62 +++---- s20x-3.2.1/s20x/man/camplake.df.Rd | 34 +-- s20x-3.2.1/s20x/man/casestudy.Rd |only s20x-3.2.1/s20x/man/chalk.df.Rd | 36 ++-- s20x-3.2.1/s20x/man/ciReg.Rd | 68 +++---- s20x-3.2.1/s20x/man/computer.df.Rd | 38 ++-- s20x-3.2.1/s20x/man/cooks20x.Rd | 104 +++++------ s20x-3.2.1/s20x/man/course.df.Rd | 58 +++--- s20x-3.2.1/s20x/man/course2way.df.Rd | 38 ++-- s20x-3.2.1/s20x/man/crossFactors.Rd | 122 +++++++------- s20x-3.2.1/s20x/man/crosstabs.Rd | 74 ++++---- s20x-3.2.1/s20x/man/diamonds.df.Rd | 32 +-- s20x-3.2.1/s20x/man/displayPairs.Rd | 142 ++++++++-------- s20x-3.2.1/s20x/man/eovcheck.Rd | 218 ++++++++++++------------- s20x-3.2.1/s20x/man/estimateContrasts.Rd | 122 +++++++------- s20x-3.2.1/s20x/man/fire.df.Rd | 32 +-- s20x-3.2.1/s20x/man/freq1way.Rd | 128 +++++++------- s20x-3.2.1/s20x/man/fruitfly.df.Rd | 64 +++---- s20x-3.2.1/s20x/man/getVersion.Rd | 38 ++-- s20x-3.2.1/s20x/man/house.df.Rd | 32 +-- s20x-3.2.1/s20x/man/incomes.df.Rd | 22 +- s20x-3.2.1/s20x/man/interactionPlots.Rd | 270 +++++++++++++++---------------- s20x-3.2.1/s20x/man/lakemary.df.Rd | 30 +-- s20x-3.2.1/s20x/man/larain.df.Rd | 26 +- s20x-3.2.1/s20x/man/layout20x.Rd | 66 +++---- s20x-3.2.1/s20x/man/levene.test.Rd | 80 ++++----- s20x-3.2.1/s20x/man/listCaseStudies.Rd |only s20x-3.2.1/s20x/man/mazda.df.Rd | 32 +-- s20x-3.2.1/s20x/man/mening.df.Rd | 30 +-- s20x-3.2.1/s20x/man/mergers.df.Rd | 24 +- s20x-3.2.1/s20x/man/modelcheck.Rd | 92 +++++----- s20x-3.2.1/s20x/man/mozart.df.Rd | 34 +-- s20x-3.2.1/s20x/man/multipleComp.Rd | 78 ++++---- s20x-3.2.1/s20x/man/nail.df.Rd | 34 +-- s20x-3.2.1/s20x/man/normcheck.Rd | 250 ++++++++++++++-------------- s20x-3.2.1/s20x/man/onewayPlot.Rd | 228 +++++++++++++------------- s20x-3.2.1/s20x/man/openCaseStudy.Rd |only s20x-3.2.1/s20x/man/oysters.df.Rd | 40 ++-- s20x-3.2.1/s20x/man/pairs20x.Rd | 68 +++---- s20x-3.2.1/s20x/man/peru.df.Rd | 40 ++-- s20x-3.2.1/s20x/man/predict20x.Rd | 126 +++++++------- s20x-3.2.1/s20x/man/predictCount.Rd | 76 ++++---- s20x-3.2.1/s20x/man/predictGLM.Rd | 76 ++++---- s20x-3.2.1/s20x/man/propslsd.new.Rd | 52 ++--- s20x-3.2.1/s20x/man/rain.df.Rd | 40 ++-- s20x-3.2.1/s20x/man/residPlot.Rd | 80 ++++----- s20x-3.2.1/s20x/man/rowdistr.Rd | 142 ++++++++-------- s20x-3.2.1/s20x/man/rr.Rd | 24 +- s20x-3.2.1/s20x/man/s20x-package.Rd | 1 s20x-3.2.1/s20x/man/seeds.df.Rd | 40 ++-- s20x-3.2.1/s20x/man/sheep.df.Rd | 30 +-- s20x-3.2.1/s20x/man/skewness.Rd | 60 +++--- s20x-3.2.1/s20x/man/skulls.df.Rd | 62 +++---- s20x-3.2.1/s20x/man/snapper.df.Rd | 46 ++--- s20x-3.2.1/s20x/man/soyabean.df.Rd | 40 ++-- s20x-3.2.1/s20x/man/stripqq.Rd | 80 ++++----- s20x-3.2.1/s20x/man/summary1way.Rd | 126 +++++++------- s20x-3.2.1/s20x/man/summary2way.Rd | 192 +++++++++++----------- s20x-3.2.1/s20x/man/summaryStats.Rd | 214 ++++++++++++------------ s20x-3.2.1/s20x/man/teach.df.Rd | 38 ++-- s20x-3.2.1/s20x/man/technitron.df.Rd | 44 ++--- s20x-3.2.1/s20x/man/thyroid.df.Rd | 42 ++-- s20x-3.2.1/s20x/man/toothpaste.df.Rd | 38 ++-- s20x-3.2.1/s20x/man/trendscatter.Rd | 164 +++++++++--------- s20x-3.2.1/s20x/man/zoo.df.Rd | 48 ++--- 85 files changed, 2830 insertions(+), 2731 deletions(-)
Title: Open-Source Software for 'Omic' Data Analysis and Visualization
Description: A tool for interactive exploration of the results from 'omics'
experiments to facilitate novel discoveries from high-throughput biology. The
software includes R functions for the 'bioinformatician' to deposit study
metadata and the outputs from statistical analyses (e.g. differential
expression, enrichment). These results are then exported to an interactive
JavaScript dashboard that can be interrogated on the user's local machine or
deployed online to be explored by collaborators. The dashboard includes
'sortable' tables, interactive plots including network visualization, and
fine-grained filtering based on statistical significance.
Author: Terrence Ernst [aut] ,
John Blischak [aut] ,
Paul Nordlund [aut] ,
Justin Moore [aut] ,
Joe Dalen [aut] ,
Akshay Bhamidipati [aut] ,
Brett Engelmann [aut, cre],
Marco Curado [aut] ,
Joe LoGrasso [aut] ,
Elyse Geoffroy [ctb],
AbbVie Inc. [cph, fnd]
Maintainer: Brett Engelmann <brett.engelmann@abbvie.com>
Diff between OmicNavigator versions 1.16.0 dated 2025-07-30 and 1.19.0 dated 2025-12-17
OmicNavigator-1.16.0/OmicNavigator/man/listStudies.Rd |only OmicNavigator-1.19.0/OmicNavigator/DESCRIPTION | 19 OmicNavigator-1.19.0/OmicNavigator/LICENSE | 4 OmicNavigator-1.19.0/OmicNavigator/MD5 | 281 OmicNavigator-1.19.0/OmicNavigator/NAMESPACE | 193 OmicNavigator-1.19.0/OmicNavigator/NEWS.md | 2006 +++--- OmicNavigator-1.19.0/OmicNavigator/R/add.R | 1472 ++--- OmicNavigator-1.19.0/OmicNavigator/R/app.R | 1062 +-- OmicNavigator-1.19.0/OmicNavigator/R/check.R | 1182 ++-- OmicNavigator-1.19.0/OmicNavigator/R/combine.R | 194 OmicNavigator-1.19.0/OmicNavigator/R/data.R | 388 - OmicNavigator-1.19.0/OmicNavigator/R/dropdowns.R |only OmicNavigator-1.19.0/OmicNavigator/R/export.R | 1180 +--- OmicNavigator-1.19.0/OmicNavigator/R/get.R | 1126 ++- OmicNavigator-1.19.0/OmicNavigator/R/import.R | 160 OmicNavigator-1.19.0/OmicNavigator/R/local.R | 222 OmicNavigator-1.19.0/OmicNavigator/R/overlaps.R | 245 OmicNavigator-1.19.0/OmicNavigator/R/plots.R | 1028 +-- OmicNavigator-1.19.0/OmicNavigator/R/print.R | 64 OmicNavigator-1.19.0/OmicNavigator/R/sanitize.R | 222 OmicNavigator-1.19.0/OmicNavigator/R/summary.R | 98 OmicNavigator-1.19.0/OmicNavigator/R/tests.R | 1046 +-- OmicNavigator-1.19.0/OmicNavigator/R/upset.R | 1411 ++-- OmicNavigator-1.19.0/OmicNavigator/R/utility.R | 448 - OmicNavigator-1.19.0/OmicNavigator/R/validate.R | 777 +- OmicNavigator-1.19.0/OmicNavigator/R/zzz.R | 207 OmicNavigator-1.19.0/OmicNavigator/README.md | 474 - OmicNavigator-1.19.0/OmicNavigator/build/partial.rdb |binary OmicNavigator-1.19.0/OmicNavigator/inst/CITATION | 46 OmicNavigator-1.19.0/OmicNavigator/inst/doc/OmicNavigatorAPI.R | 890 +-- OmicNavigator-1.19.0/OmicNavigator/inst/doc/OmicNavigatorAPI.Rnw | 1315 ++-- OmicNavigator-1.19.0/OmicNavigator/inst/doc/OmicNavigatorAPI.pdf |binary OmicNavigator-1.19.0/OmicNavigator/inst/doc/OmicNavigatorUsersGuide.R | 1034 +-- OmicNavigator-1.19.0/OmicNavigator/inst/doc/OmicNavigatorUsersGuide.Rnw | 2935 +++++----- OmicNavigator-1.19.0/OmicNavigator/inst/doc/OmicNavigatorUsersGuide.pdf |binary OmicNavigator-1.19.0/OmicNavigator/inst/extdata/description-fields-reserved.txt | 94 OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/backwardsCompatibility |only OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testAdd.R | 331 - OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testApp.R | 1109 +-- OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testBackwardsCompatibility.R |only OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testBugs.R | 462 - OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testCheck.R | 1519 ++--- OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testCombine.R | 268 OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testDropdowns.R |only OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testExport.R | 644 +- OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testExtraMetadata.R | 278 OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testGet.R | 1771 +++--- OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testGetNumeric.R | 534 - OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testImport.R | 536 + OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testLibraries.R |only OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testMetaAssays.R |only OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testOverlaps.R | 90 OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testPiecemeal.R | 364 - OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testPlot.R | 2071 +++---- OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testPrint.R | 58 OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testSummary.R | 68 OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testUpset.R | 1682 ++--- OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testUtility.R | 98 OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/testValidate.R | 614 +- OmicNavigator-1.19.0/OmicNavigator/inst/tinytest/tinytestSettings.R | 18 OmicNavigator-1.19.0/OmicNavigator/man/Mm.c2.Rd | 70 OmicNavigator-1.19.0/OmicNavigator/man/OmicNavigator-package.Rd | 100 OmicNavigator-1.19.0/OmicNavigator/man/addAnnotations.Rd | 73 OmicNavigator-1.19.0/OmicNavigator/man/addAssays.Rd | 63 OmicNavigator-1.19.0/OmicNavigator/man/addBarcodes.Rd | 89 OmicNavigator-1.19.0/OmicNavigator/man/addEnrichments.Rd | 71 OmicNavigator-1.19.0/OmicNavigator/man/addEnrichmentsLinkouts.Rd | 122 OmicNavigator-1.19.0/OmicNavigator/man/addFeatures.Rd | 61 OmicNavigator-1.19.0/OmicNavigator/man/addMapping.Rd | 102 OmicNavigator-1.19.0/OmicNavigator/man/addMetaAssays.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/addMetaFeatures.Rd | 71 OmicNavigator-1.19.0/OmicNavigator/man/addMetaFeaturesLinkouts.Rd | 129 OmicNavigator-1.19.0/OmicNavigator/man/addModels.Rd | 105 OmicNavigator-1.19.0/OmicNavigator/man/addObjects.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/addOverlaps.Rd | 59 OmicNavigator-1.19.0/OmicNavigator/man/addPlots.Rd | 182 OmicNavigator-1.19.0/OmicNavigator/man/addReports.Rd | 65 OmicNavigator-1.19.0/OmicNavigator/man/addResults.Rd | 61 OmicNavigator-1.19.0/OmicNavigator/man/addResultsLinkouts.Rd | 129 OmicNavigator-1.19.0/OmicNavigator/man/addSamples.Rd | 61 OmicNavigator-1.19.0/OmicNavigator/man/addTests.Rd | 124 OmicNavigator-1.19.0/OmicNavigator/man/basal.vs.lp.Rd | 90 OmicNavigator-1.19.0/OmicNavigator/man/basal.vs.ml.Rd | 90 OmicNavigator-1.19.0/OmicNavigator/man/cam.BasalvsLP.Rd | 82 OmicNavigator-1.19.0/OmicNavigator/man/cam.BasalvsML.Rd | 82 OmicNavigator-1.19.0/OmicNavigator/man/combineStudies.Rd | 142 OmicNavigator-1.19.0/OmicNavigator/man/createStudy.Rd | 567 + OmicNavigator-1.19.0/OmicNavigator/man/exportStudy.Rd | 68 OmicNavigator-1.19.0/OmicNavigator/man/getAnnotations.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getAssays.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getBarcodeData.Rd | 83 OmicNavigator-1.19.0/OmicNavigator/man/getBarcodes.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getEnrichments.Rd | 97 OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsAnnotations.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsIntersection.Rd | 106 OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsLinkouts.Rd | 85 OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsModels.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsNetwork.Rd | 64 OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsStudies.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsTable.Rd | 76 OmicNavigator-1.19.0/OmicNavigator/man/getEnrichmentsUpset.Rd | 84 OmicNavigator-1.19.0/OmicNavigator/man/getFavicons.Rd | 48 OmicNavigator-1.19.0/OmicNavigator/man/getFeatures.Rd | 59 OmicNavigator-1.19.0/OmicNavigator/man/getInstalledStudies.Rd | 48 OmicNavigator-1.19.0/OmicNavigator/man/getLinkFeatures.Rd | 55 OmicNavigator-1.19.0/OmicNavigator/man/getMapping.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getMetaAssays.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getMetaFeatures.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getMetaFeaturesLinkouts.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getMetaFeaturesTable.Rd | 57 OmicNavigator-1.19.0/OmicNavigator/man/getModels.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getNodeFeatures.Rd | 58 OmicNavigator-1.19.0/OmicNavigator/man/getObjects.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getOverlaps.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getPackageVersion.Rd | 41 OmicNavigator-1.19.0/OmicNavigator/man/getPlots.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getPlottingData.Rd | 195 OmicNavigator-1.19.0/OmicNavigator/man/getReportLink.Rd | 47 OmicNavigator-1.19.0/OmicNavigator/man/getReports.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getResults.Rd | 91 OmicNavigator-1.19.0/OmicNavigator/man/getResultsIntersection.Rd | 108 OmicNavigator-1.19.0/OmicNavigator/man/getResultsLinkouts.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getResultsModels.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getResultsStudies.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getResultsTable.Rd | 88 OmicNavigator-1.19.0/OmicNavigator/man/getResultsTests.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getResultsUpset.Rd | 69 OmicNavigator-1.19.0/OmicNavigator/man/getSamples.Rd | 75 OmicNavigator-1.19.0/OmicNavigator/man/getStudyMeta.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/getTests.Rd | 79 OmicNavigator-1.19.0/OmicNavigator/man/getUpsetCols.Rd | 45 OmicNavigator-1.19.0/OmicNavigator/man/group.Rd | 80 OmicNavigator-1.19.0/OmicNavigator/man/importStudy.Rd | 44 OmicNavigator-1.19.0/OmicNavigator/man/installApp.Rd | 66 OmicNavigator-1.19.0/OmicNavigator/man/installStudy.Rd | 72 OmicNavigator-1.19.0/OmicNavigator/man/lane.Rd | 80 OmicNavigator-1.19.0/OmicNavigator/man/lcpm.Rd | 70 OmicNavigator-1.19.0/OmicNavigator/man/plotStudy.Rd | 135 OmicNavigator-1.19.0/OmicNavigator/man/removeStudy.Rd | 42 OmicNavigator-1.19.0/OmicNavigator/man/samplenames.Rd | 70 OmicNavigator-1.19.0/OmicNavigator/man/shared-add.Rd | 42 OmicNavigator-1.19.0/OmicNavigator/man/shared-data.Rd | 46 OmicNavigator-1.19.0/OmicNavigator/man/shared-dropdowns.Rd |only OmicNavigator-1.19.0/OmicNavigator/man/shared-get.Rd | 83 OmicNavigator-1.19.0/OmicNavigator/man/shared-upset.Rd | 66 OmicNavigator-1.19.0/OmicNavigator/man/startApp.Rd | 74 OmicNavigator-1.19.0/OmicNavigator/man/summary.onStudy.Rd | 46 OmicNavigator-1.19.0/OmicNavigator/man/validateStudy.Rd | 38 OmicNavigator-1.19.0/OmicNavigator/tests/tinytest.R | 8 OmicNavigator-1.19.0/OmicNavigator/vignettes/OmicNavigatorAPI.Rnw | 1315 ++-- OmicNavigator-1.19.0/OmicNavigator/vignettes/OmicNavigatorUsersGuide.Rnw | 2935 +++++----- 151 files changed, 23412 insertions(+), 21679 deletions(-)
Title: Vowel Covariation Tools
Description: Tools to support research on vowel covariation. Methods are provided to
support Principal Component Analysis workflows (as in Brand et al. (2021)
<doi:10.1016/j.wocn.2021.101096> and Wilson Black et al. (2023)
<doi:10.1515/lingvan-2022-0086>).
Author: Joshua Wilson Black [aut, cre, cph] ,
James Brand [aut]
Maintainer: Joshua Wilson Black <joshua.black@canterbury.ac.nz>
Diff between nzilbb.vowels versions 0.4.2 dated 2025-12-04 and 0.4.3 dated 2025-12-17
DESCRIPTION | 10 ++++----- MD5 | 14 ++++++------- NAMESPACE | 3 -- NEWS.md | 6 +++++ R/correlation_plots.R | 32 +++++++++++++------------------ man/figures/README-unnamed-chunk-2-1.png |binary man/figures/README-unnamed-chunk-2-2.png |binary man/plot_correlation_counts.Rd | 6 ++--- 8 files changed, 36 insertions(+), 35 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-03-14 1.5.6
2024-09-12 1.5.5
2024-08-18 1.5.4
2024-06-23 1.5.3
2024-06-04 1.5.2
2024-04-10 1.5.1
2024-02-05 1.5.0
2024-01-15 1.4.13
2023-12-15 1.4.12
2023-12-08 1.4.11
2023-10-28 1.4.10
2023-09-03 1.4.9
2023-08-24 1.4.8
2023-08-07 1.4.7
2023-04-29 1.4.6
2023-02-15 1.4.5
2023-01-09 1.4.4
2022-12-08 1.4.3
2022-10-16 1.4.2
2022-09-25 1.4.1
2022-09-08 1.4.0
2022-08-23 1.3.4
2022-07-04 1.3.3
2022-06-23 1.3.2
2022-05-23 1.3.1
2022-02-21 1.3.0
2021-12-13 1.2.5
2021-10-18 1.2.4
2021-10-05 1.2.2
2021-09-23 1.2.1
2021-09-20 1.2.0
2021-08-23 1.1.0
2021-08-17 1.0.0
2021-07-22 0.3.0
2021-06-17 0.2.0
2021-05-19 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-01-14 2.3.11
Title: Structure for Organizing Monte Carlo Simulation Designs
Description: Provides tools to safely and efficiently organize and execute
Monte Carlo simulation experiments in R.
The package controls the structure and back-end of Monte Carlo simulation experiments
by utilizing a generate-analyse-summarise workflow. The workflow safeguards against
common simulation coding issues, such as automatically re-simulating non-convergent results,
prevents inadvertently overwriting simulation files, catches error and warning messages
during execution, implicitly supports parallel processing with high-quality random number
generation, and provides tools for managing high-performance computing (HPC) array jobs
submitted to schedulers such as SLURM. For a pedagogical introduction to the package see
Sigal and Chalmers (2016) <doi:10.1080/10691898.2016.1246953>. For a more in-depth overview of
the package and its design philosophy see Chalmers and Adkins (2020) <doi:10.20982/tqmp.16.4.p248>.
Author: Phil Chalmers [aut, cre] ,
Matthew Sigal [ctb],
Ogreden Oguzhan [ctb],
Mikko Roenkkoe [aut],
Moritz Ketzer [ctb]
Maintainer: Phil Chalmers <rphilip.chalmers@gmail.com>
Diff between SimDesign versions 2.21 dated 2025-09-18 and 2.22 dated 2025-12-17
DESCRIPTION | 12 +- MD5 | 64 ++++++----- NEWS.md | 18 +++ R/PBA.R | 28 +++- R/SimExtract.R | 22 +++ R/SimResults.R | 18 ++- R/SimSolve.R | 3 R/analysis.R | 50 ++++++++ R/runSimulation.R | 214 ++++++++++++++++++++++++++++++++++---- R/util.R | 2 R/zzz.R | 6 + inst/doc/Catch_errors.html | 10 - inst/doc/Fixed_obj_fun.html | 10 - inst/doc/HPC-computing.html | 4 inst/doc/MultipleAnalyses.html | 4 inst/doc/Parallel-computing.html | 4 inst/doc/Saving-results.html | 4 inst/doc/SimDesign-intro.html | 4 man/PBA.Rd | 6 - man/SimExtract.Rd | 4 man/SimResults.Rd | 13 +- man/SimSolve.Rd | 2 man/new_PushbulletNotifier.Rd | 2 man/new_TelegramNotifier.Rd | 2 man/runArraySimulation.Rd | 12 ++ man/runSimulation.Rd | 147 ++++++++++++++++++++++++-- tests/tests/test-04-prepare.R |only tests/tests/test-seeds_cruncher |only tests/tests/test-seeds_cruncher_1 |only tests/tests/test.rds |only 30 files changed, 565 insertions(+), 100 deletions(-)
Title: R Interface to 'FishBase'
Description: A programmatic interface to 'FishBase', re-written
based on an accompanying 'RESTful' API. Access tables describing over 30,000
species of fish, their biology, ecology, morphology, and more. This package also
supports experimental access to 'SeaLifeBase' data, which contains
nearly 200,000 species records for all types of aquatic life not covered by
'FishBase.'
Author: Carl Boettiger [cre, aut] ,
Scott Chamberlain [aut] ,
Duncan Temple Lang [aut],
Peter Wainwright [aut],
Kevin Cazelles [ctb] ,
Guohuan Su [ctb]
Maintainer: Carl Boettiger <cboettig@gmail.com>
Diff between rfishbase versions 5.0.1 dated 2025-01-12 and 5.0.2 dated 2025-12-17
DESCRIPTION | 22 ++-- MD5 | 14 +- NEWS.md | 11 ++ R/fb_tbl.R | 179 +++++++++++++++++----------------- R/load_taxa.R | 215 ++++++++++++++++++++++++++--------------- README.md | 13 +- inst/WORDLIST | 3 tests/testthat/test_endpoint.R | 14 -- 8 files changed, 278 insertions(+), 193 deletions(-)
Title: Machinery for Processing Random Effect Formulas
Description: Takes formulas including random-effects components (formatted as in 'lme4', 'glmmTMB', etc.) and processes them. Includes various helper functions.
Author: Ben Bolker [aut, cre] ,
Anna Ly [ctb]
Maintainer: Ben Bolker <bolker@mcmaster.ca>
Diff between reformulas versions 0.4.2 dated 2025-10-28 and 0.4.3 dated 2025-12-17
DESCRIPTION | 23 ++++++++++++++--------- MD5 | 13 ++++++++----- NAMESPACE | 13 +++++++++++++ NEWS.md | 4 ++++ R/VarCorr.R |only build/partial.rdb |binary man/formatVC.Rd |only man/format_sdvar.Rd |only man/no_specials.Rd | 1 + 9 files changed, 40 insertions(+), 14 deletions(-)
Title: Bayesian Reconstruction of Disease Outbreaks by Combining
Epidemiologic and Genomic Data
Description: Bayesian reconstruction of disease outbreaks using epidemiological
and genetic information. Jombart T, Cori A, Didelot X, Cauchemez S, Fraser
C and Ferguson N. 2014. <doi:10.1371/journal.pcbi.1003457>. Campbell, F,
Cori A, Ferguson N, Jombart T. 2019. <doi:10.1371/journal.pcbi.1006930>.
Author: Thibaut Jombart [aut],
Finlay Campbell [aut, cre],
Rich Fitzjohn [aut],
Gerry Tonkin-Hill [ctb],
Kristjan Eldjarn [ctb],
Alexis Robert [ctb]
Maintainer: Finlay Campbell <finlaycampbell93@gmail.com>
Diff between outbreaker2 versions 1.1.3 dated 2022-05-23 and 1.1.4 dated 2025-12-17
DESCRIPTION | 11 LICENSE | 2 MD5 | 180 NEWS.md | 13 R/bind_to_function.R | 2 R/create_config.R | 55 R/create_param.R | 2 R/custom_likelihoods.R | 6 R/custom_moves.R | 8 R/doc_data.R | 68 R/get_cpp_api.R | 36 R/internals.R | 25 R/outbreaker.R | 22 R/outbreaker_chains_methods.R | 23 R/outbreaker_data.R | 9 R/outbreaker_move.R | 4 R/package.R | 14 R/palettes.R | 82 README.md | 16 build/vignette.rds |binary inst/CITATION | 33 inst/doc/Rcpp_API.R | 6 inst/doc/Rcpp_API.html | 240 - inst/doc/customisation.R | 89 inst/doc/customisation.Rmd | 6 inst/doc/customisation.html | 2029 +++++----- inst/doc/introduction.R | 53 inst/doc/introduction.html | 1100 ++--- inst/doc/overview.R | 6 inst/doc/overview.html | 211 - man/bind_to_function.Rd | 2 man/create_config.Rd | 54 man/create_param.Rd | 2 man/custom_likelihoods.Rd | 6 man/custom_moves.Rd | 8 man/get_cpp_api.Rd | 36 man/outbreaker.Rd | 22 man/outbreaker_chains.Rd | 14 man/outbreaker_data.Rd | 6 man/outbreaker_package.Rd | 14 man/palettes.Rd | 52 src/likelihoods.cpp | 34 tests/testthat.R | 8 tests/testthat/test_binding.R | 116 tests/testthat/test_priors.R | 254 - vignettes/customisation.Rmd | 6 vignettes/customisation_cache/html/run_new_move_201bee2736c15bd01aff7d66538c46bd.RData |binary vignettes/customisation_cache/html/run_new_move_201bee2736c15bd01aff7d66538c46bd.rdb |binary vignettes/customisation_cache/html/run_new_move_201bee2736c15bd01aff7d66538c46bd.rdx |binary vignettes/customisation_cache/html/run_null_model_8771832d87831190a82188fc37cef737.RData |binary vignettes/customisation_cache/html/run_null_model_8771832d87831190a82188fc37cef737.rdb |binary vignettes/customisation_cache/html/run_null_model_8771832d87831190a82188fc37cef737.rdx |binary vignettes/customisation_cache/html/run_wt_770f6e5ae6cc9263e7c7c554c148a8b2.RData |binary vignettes/customisation_cache/html/run_wt_770f6e5ae6cc9263e7c7c554c148a8b2.rdb |binary vignettes/customisation_cache/html/run_wt_770f6e5ae6cc9263e7c7c554c148a8b2.rdx |binary vignettes/figs-customisation/null_net-1.png |binary vignettes/figs-customisation/null_trees-1.png |binary vignettes/figs-customisation/res_new_move-1.png |binary vignettes/figs-customisation/res_new_move-2.png |binary vignettes/figs-customisation/res_null_diag-1.png |binary vignettes/figs-customisation/res_null_diag-2.png |binary vignettes/figs-customisation/res_null_model-1.png |binary vignettes/figs-customisation/res_null_model-2.png |binary vignettes/figs-customisation/res_null_model-3.png |binary vignettes/figs-customisation/res_null_priors-1.png |binary vignettes/figs-customisation/res_null_priors-2.png |binary vignettes/figs-customisation/res_wt-1.png |binary vignettes/figs-customisation/res_wt-2.png |binary vignettes/figs-customisation/res_wt-3.png |binary vignettes/figs-customisation/traces_custom_priors-4.png |binary vignettes/figs-customisation/traces_custom_priors-5.png |binary vignettes/figs-customisation/wt_net-1.png |binary vignettes/figs-introduction/basic_trace-1.png |binary vignettes/figs-introduction/basic_trace_burn-1.png |binary vignettes/figs-introduction/config2-1.png |binary vignettes/figs-introduction/config2-2.png |binary vignettes/figs-introduction/many_plots-1.png |binary vignettes/figs-introduction/many_plots-2.png |binary vignettes/figs-introduction/many_plots-3.png |binary vignettes/figs-introduction/many_plots-4.png |binary vignettes/figs-introduction/many_plots-5.png |binary vignettes/figs-introduction/traces-1.png |binary vignettes/figs-introduction/traces-2.png |binary vignettes/figs-introduction/traces-3.png |binary vignettes/introduction_cache/html/__packages | 2 vignettes/introduction_cache/html/config2_a6e218c734814a74f6d109430a70e31f.RData |binary vignettes/introduction_cache/html/config2_a6e218c734814a74f6d109430a70e31f.rdb |binary vignettes/introduction_cache/html/config2_a6e218c734814a74f6d109430a70e31f.rdx |binary vignettes/introduction_cache/html/first_run_262464f50c8d3b374ad1083b0ea73503.RData |binary vignettes/introduction_cache/html/first_run_262464f50c8d3b374ad1083b0ea73503.rdb |binary vignettes/introduction_cache/html/first_run_262464f50c8d3b374ad1083b0ea73503.rdx |binary 91 files changed, 2626 insertions(+), 2361 deletions(-)
Title: Read and Write 'Parquet' Files
Description: Self-sufficient reader and writer for flat 'Parquet' files.
Can read most 'Parquet' data types. Can write many 'R' data types,
including factors and temporal types. See docs for limitations.
Author: Gabor Csardi [aut, cre],
Hannes Muehleisen [aut, cph] ,
Google Inc. [cph],
Apache Software Foundation [cph],
Posit Software, PBC [cph],
RAD Game Tools [cph],
Valve Software [cph],
Tenacious Software LLC [cph],
Facebook, Inc. [cph]
Maintainer: Gabor Csardi <csardi.gabor@gmail.com>
Diff between nanoparquet versions 0.4.2 dated 2025-02-22 and 0.4.3 dated 2025-12-17
DESCRIPTION | 14 - MD5 | 76 +++--- NEWS.md | 4 R/arrow-schema.R | 47 ++-- R/infer-parquet-schema.R | 52 ++-- R/options.R | 29 +- R/parquet-column-types.R | 168 +++++++------- R/parquet-metadata.R | 218 +++++++++---------- R/porcelain.R | 184 ++++++++-------- R/read-parquet.R | 231 ++++++++++---------- R/schema.R | 160 +++++++++----- R/utils.R | 29 +- R/write-parquet.R | 96 +++++--- inst/WORDLIST | 10 src/RParquetReader.cpp | 2 src/lib/bytebuffer.h | 2 src/rwrapper.cpp | 1 tests/testthat.R | 1 tests/testthat/helper.R | 20 + tests/testthat/test-parquet-schema.R | 2 tests/testthat/test-porcelain.R | 43 ++- tests/testthat/test-pypolars.R | 7 tests/testthat/test-read-parquet-2.R | 64 +++-- tests/testthat/test-read-parquet-3.R | 68 ++++-- tests/testthat/test-read-parquet-4.R | 35 ++- tests/testthat/test-read-parquet-5.R | 81 ++++--- tests/testthat/test-read-parquet-row-group.R | 8 tests/testthat/test-read-parquet.R | 88 +++++-- tests/testthat/test-rle.R | 2 tests/testthat/test-utils.R | 2 tests/testthat/test-write-encodings-2.R | 27 +- tests/testthat/test-write-encodings.R | 26 +- tests/testthat/test-write-parquet-2.R | 94 ++++++-- tests/testthat/test-write-parquet-3.R | 90 ++++--- tests/testthat/test-write-parquet-4.R | 154 +++++++++++-- tests/testthat/test-write-parquet-compression.R | 14 + tests/testthat/test-write-parquet-row-groups.R | 5 tests/testthat/test-write-parquet-statistics.R | 271 +++++++++++++++--------- tests/testthat/test-write-parquet.R | 25 +- 39 files changed, 1532 insertions(+), 918 deletions(-)
Title: The Tidymodels Extension for Time Series Modeling
Description: The time series forecasting framework for use with the 'tidymodels' ecosystem.
Models include ARIMA, Exponential Smoothing, and additional time series models
from the 'forecast' and 'prophet' packages. Refer to "Forecasting Principles & Practice, Second edition"
(<https://otexts.com/fpp2/>).
Refer to "Prophet: forecasting at scale"
(<https://research.facebook.com/blog/2017/02/prophet-forecasting-at-scale/>.).
Author: Matt Dancho [aut, cre],
Business Science [cph]
Maintainer: Matt Dancho <mdancho@business-science.io>
Diff between modeltime versions 1.3.2 dated 2025-08-28 and 1.3.3 dated 2025-12-17
DESCRIPTION | 17 MD5 | 34 NEWS.md | 9 R/modeltime-fit-workflowset.R | 1 R/modeltime-refit.R | 1 R/parsnip-arima_boost.R | 3 R/utils-control-par.R | 7 R/utils-xgboost.R | 12 build/vignette.rds |binary inst/doc/getting-started-with-modeltime.html | 1666 +++++++++------------- man/adam_reg.Rd | 16 man/arima_boost.Rd | 4 man/exp_smoothing.Rd | 14 man/prophet_boost.Rd | 4 man/temporal_hierarchy.Rd | 2 tests/testthat/test-algo-arima_boost-Arima.R | 41 tests/testthat/test-algo-arima_boost-auto_arima.R | 42 tests/testthat/test-algo-prophet_boost.R | 42 18 files changed, 860 insertions(+), 1055 deletions(-)
Title: Imputation Estimator from Borusyak, Jaravel, and Spiess (2021)
Description: Estimates Two-way Fixed Effects difference-in-differences/event-study models using the imputation-based approach proposed by Borusyak, Jaravel, and Spiess (2021).
Author: Kyle Butts [aut, cre]
Maintainer: Kyle Butts <buttskyle96@gmail.com>
Diff between didimputation versions 0.3.0 dated 2022-08-25 and 0.5.0 dated 2025-12-17
didimputation-0.3.0/didimputation/R/RcppExports.R |only didimputation-0.3.0/didimputation/R/didimputation-package.R |only didimputation-0.3.0/didimputation/R/utils-pipe.R |only didimputation-0.3.0/didimputation/R/utils.R |only didimputation-0.3.0/didimputation/R/zzz.R |only didimputation-0.3.0/didimputation/inst/CITATION |only didimputation-0.3.0/didimputation/man/pipe.Rd |only didimputation-0.3.0/didimputation/src |only didimputation-0.5.0/didimputation/DESCRIPTION | 33 didimputation-0.5.0/didimputation/MD5 | 31 didimputation-0.5.0/didimputation/NAMESPACE | 4 didimputation-0.5.0/didimputation/R/did_imputation.R | 369 +++++----- didimputation-0.5.0/didimputation/README.md | 274 +++---- didimputation-0.5.0/didimputation/inst/references.bib | 90 +- didimputation-0.5.0/didimputation/man/did_imputation.Rd | 65 + didimputation-0.5.0/didimputation/man/figures/README-plot-compare-1.png |binary didimputation-0.5.0/didimputation/man/figures/README-plot-df-het-1.png |binary didimputation-0.5.0/didimputation/man/figures/README-plot-es-1.png |binary didimputation-0.5.0/didimputation/tests/testthat/test-did_imputation.R | 80 +- 19 files changed, 524 insertions(+), 422 deletions(-)
Title: Compute Expected Shortfall and Value at Risk for Continuous
Distributions
Description: Compute expected shortfall (ES) and Value at Risk (VaR) from a
quantile function, distribution function, random number generator,
probability density function, or data. ES is also known as Conditional
Value at Risk (CVaR). Virtually any continuous distribution can be
specified. The functions are vectorized over the arguments. The
computations are done directly from the definitions, see e.g. Acerbi and
Tasche (2002) <doi:10.1111/1468-0300.00091>. Some support for GARCH models
is provided, as well.
Author: Georgi N. Boshnakov [aut, cre]
Maintainer: Georgi N. Boshnakov <georgi.boshnakov@manchester.ac.uk>
Diff between cvar versions 0.5 dated 2022-11-03 and 0.6 dated 2025-12-17
cvar-0.5/cvar/vignettes/auto |only cvar-0.6/cvar/DESCRIPTION | 31 +-- cvar-0.6/cvar/MD5 | 42 ++-- cvar-0.6/cvar/NAMESPACE | 2 cvar-0.6/cvar/NEWS.md | 16 + cvar-0.6/cvar/R/VaR.R | 273 +++++++++++++++++++++----------- cvar-0.6/cvar/R/cvar-package.R | 78 +++++---- cvar-0.6/cvar/R/garch.R | 9 - cvar-0.6/cvar/README.md | 7 cvar-0.6/cvar/build/partial.rdb |binary cvar-0.6/cvar/build/vignette.rds |binary cvar-0.6/cvar/inst/doc/Guide_cvar.Rnw | 2 cvar-0.6/cvar/inst/doc/Guide_cvar.pdf |binary cvar-0.6/cvar/inst/pkgdown.yml |only cvar-0.6/cvar/man/ES.Rd | 63 ++++--- cvar-0.6/cvar/man/GarchModel.Rd | 1 cvar-0.6/cvar/man/VaR.Rd | 33 ++- cvar-0.6/cvar/man/cvar-package.Rd | 73 +++++--- cvar-0.6/cvar/man/predict.garch1c1.Rd | 1 cvar-0.6/cvar/man/sim_garch1c1.Rd | 2 cvar-0.6/cvar/tests/testthat/test-VaR.R | 85 +++++++++ cvar-0.6/cvar/vignettes/Guide_cvar.Rnw | 2 cvar-0.6/cvar/vignettes/REFERENCES.bib | 2 23 files changed, 492 insertions(+), 230 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-06-27 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-12-06 0.1.4
2025-11-14 0.1.1
2025-10-30 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-12-06 0.3.3
2025-10-10 0.3.2
2025-06-11 0.3.1
2025-04-16 0.3.0
2025-01-23 0.2.0
2024-11-19 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-07-04 0.1.3
2022-09-30 0.1.2
2021-11-06 0.1.1
2021-02-22 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-12-14 1.1.2
2023-06-30 1.1.0
2021-09-18 1.0.0
2021-02-03 0.2.3
2020-07-08 0.2.2
2020-07-06 0.2.1
2020-05-15 0.2.0
2020-03-02 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-06-08 0.5.2
2025-05-16 0.4.0
2025-04-16 0.3.0
2025-02-25 0.2.0
2024-11-14 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-02-07 1.3.0
2022-05-25 1.2.0
2022-01-07 1.1.0
2021-11-26 0.9.0
2021-09-15 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-11-28 3.0.0