More information about vald.extractor at CRAN
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Title: Extra Functions for 'gtsummary' Table Styling
Description: Provides additional convenience functions for 'gtsummary'
(Sjoberg et al. (2021) <doi:10.32614/RJ-2021-053>) & 'gt' tables,
including automatic variable labeling from dictionaries, standardized
missing value display, and consistent formatting helpers for streamlined
table styling workflows.
Author: Kyle Grealis [aut, cre] ,
Raymond Balise [ctb] ,
Daniel Maya [ctb]
Maintainer: Kyle Grealis <kyleGrealis@proton.me>
Diff between sumExtras versions 0.2.0 dated 2026-01-19 and 0.3.0 dated 2026-01-22
DESCRIPTION | 16 MD5 | 18 NEWS.md | 14 R/clean_table.R | 13 R/extras.R | 54 inst/doc/labeling.html | 1652 +++++++++++++-------------- inst/doc/styling.html | 2530 +++++++++++++++++++++--------------------- inst/doc/sumExtras-intro.html | 1210 ++++++++++---------- man/extras.Rd | 22 man/sumExtras-package.Rd | 1 10 files changed, 2808 insertions(+), 2722 deletions(-)
Title: Causal Inference in Spatiotemporal Event Data
Description: Implementation of Matched Wake Analysis (mwa) for studying causal relationships in spatiotemporal event data, introduced by Schutte and Donnay (2014) <doi:10.1016/j.polgeo.2014.03.001>.
Author: Sebastian Schutte [aut],
Karsten Donnay [aut, cre]
Maintainer: Karsten Donnay <kdonnay@gmx.net>
Diff between mwa versions 0.5.0 dated 2025-09-29 and 0.5.1 dated 2026-01-22
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS | 4 ++++ R/mwa.R | 19 +------------------ 4 files changed, 12 insertions(+), 25 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-01-07 1.5.0
2025-09-30 1.4.0
2023-03-21 1.3
2022-09-04 1.2
2021-04-27 1.1
Title: Simulate Survival Data
Description: Simulate survival times from standard parametric survival
distributions (exponential, Weibull, Gompertz), 2-component mixture
distributions, or a user-defined hazard, log hazard, cumulative hazard,
or log cumulative hazard function. Baseline covariates can be included
under a proportional hazards assumption.
Time dependent effects (i.e. non-proportional hazards) can be included by
interacting covariates with linear time or a user-defined function of time.
Clustered event times are also accommodated.
The 2-component mixture distributions can allow for a variety of flexible
baseline hazard functions reflecting those seen in practice.
If the user wishes to provide a user-defined
hazard or log hazard function then this is possible, and the resulting
cumulative hazard function does not need to have a closed-form solution.
For details see the supporting paper <doi:10.18637/jss.v097.i03>.
Note that this package is modelled on the 'survsim' package available in
the 'Stata' software (see [...truncated...]
Author: Sam Brilleman [cre, aut, cph],
Alessandro Gasparini [ctb]
Maintainer: Sam Brilleman <sam.brilleman@gmail.com>
Diff between simsurv versions 1.0.0 dated 2021-01-13 and 1.0.1 dated 2026-01-22
DESCRIPTION | 12 LICENSE | 1348 ++++++++--------- MD5 | 58 NAMESPACE | 8 NEWS.md | 145 - R/brcancer.R | 52 R/simsurv.R | 2422 +++++++++++++++---------------- build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 42 inst/doc/simsurv_technical.R | 6 inst/doc/simsurv_technical.Rmd | 574 +++---- inst/doc/simsurv_technical.html | 981 ++++++------ inst/doc/simsurv_usage.R | 474 +++--- inst/doc/simsurv_usage.Rmd | 798 +++++----- inst/doc/simsurv_usage.html | 1369 ++++++++--------- man/simsurv.Rd | 2 tests/testthat.R | 8 tests/testthat/helpers/check_bias.R | 24 tests/testthat/helpers/is_exponential.R | 6 tests/testthat/helpers/is_gompertz.R | 6 tests/testthat/helpers/is_weibull.R | 6 tests/testthat/helpers/recover_betas.R | 12 tests/testthat/helpers/recover_gammas.R | 18 tests/testthat/helpers/recover_lambdas.R | 26 tests/testthat/helpers/recover_params.R | 32 tests/testthat/helpers/sim_run.R | 66 tests/testthat/test_simsurv.R | 156 - vignettes/simsurv_technical.Rmd | 574 +++---- vignettes/simsurv_usage.Rmd | 798 +++++----- 30 files changed, 5012 insertions(+), 5011 deletions(-)
Title: Automatic Forecasting Procedure
Description: Implements a procedure for forecasting time series data based on
an additive model where non-linear trends are fit with yearly, weekly, and
daily seasonality, plus holiday effects. It works best with time series
that have strong seasonal effects and several seasons of historical data.
Prophet is robust to missing data and shifts in the trend, and typically
handles outliers well.
Author: Cuong Duong [cre, aut],
Sean Taylor [aut],
Ben Letham [aut]
Maintainer: Cuong Duong <cuong.duong242@gmail.com>
Diff between prophet versions 1.0 dated 2021-03-30 and 1.1.7 dated 2026-01-22
prophet-1.0/prophet/data |only prophet-1.1.7/prophet/DESCRIPTION | 24 prophet-1.1.7/prophet/MD5 | 59 prophet-1.1.7/prophet/NAMESPACE | 1 prophet-1.1.7/prophet/R/data.R | 8 prophet-1.1.7/prophet/R/diagnostics.R | 59 prophet-1.1.7/prophet/R/plot.R | 4 prophet-1.1.7/prophet/R/prophet.R | 143 prophet-1.1.7/prophet/R/stan_backends.R |only prophet-1.1.7/prophet/R/stanmodels.R | 2 prophet-1.1.7/prophet/R/sysdata.rda |only prophet-1.1.7/prophet/R/utilities.R | 2 prophet-1.1.7/prophet/build/vignette.rds |binary prophet-1.1.7/prophet/inst/doc/quick_start.R | 4 prophet-1.1.7/prophet/inst/doc/quick_start.html | 630 ++- prophet-1.1.7/prophet/inst/stan/prophet.stan | 17 prophet-1.1.7/prophet/man/check_cmdstanr.Rd |only prophet-1.1.7/prophet/man/dot-fit.Rd |only prophet-1.1.7/prophet/man/dot-load_model.Rd |only prophet-1.1.7/prophet/man/dot-sampling.Rd |only prophet-1.1.7/prophet/man/dot-stan_args.Rd |only prophet-1.1.7/prophet/man/dyplot.prophet.Rd | 2 prophet-1.1.7/prophet/man/flat_growth_init.Rd | 2 prophet-1.1.7/prophet/man/generated_holidays.Rd | 9 prophet-1.1.7/prophet/man/get_stan_backend.Rd |only prophet-1.1.7/prophet/man/make_all_seasonality_features.Rd | 2 prophet-1.1.7/prophet/man/prophet.Rd | 28 prophet-1.1.7/prophet/man/setup_dataframe.Rd | 2 prophet-1.1.7/prophet/src/Makevars | 5 prophet-1.1.7/prophet/src/Makevars.win | 5 prophet-1.1.7/prophet/src/RcppExports.cpp | 5 prophet-1.1.7/prophet/src/stanExports_prophet.cc | 34 prophet-1.1.7/prophet/src/stanExports_prophet.h | 2161 +++++++------ prophet-1.1.7/prophet/tests/testthat/test_diagnostics.R | 2 prophet-1.1.7/prophet/tests/testthat/test_prophet.R | 5 35 files changed, 1929 insertions(+), 1286 deletions(-)
Title: Spatial Lag Model Trees
Description: Model-based linear model trees adjusting for spatial correlation using a
simultaneous autoregressive spatial lag, Wagner and Zeileis (2019)
<doi:10.1111/geer.12146>.
Author: Martin Wagner [aut] ,
Achim Zeileis [aut, cre] ,
Roger Bivand [ctb]
Maintainer: Achim Zeileis <Achim.Zeileis@R-project.org>
Diff between lagsarlmtree versions 1.0-1 dated 2019-04-08 and 1.0-2 dated 2026-01-22
lagsarlmtree-1.0-1/lagsarlmtree/NEWS |only lagsarlmtree-1.0-2/lagsarlmtree/DESCRIPTION | 18 ++++++++++-------- lagsarlmtree-1.0-2/lagsarlmtree/MD5 | 14 +++++++------- lagsarlmtree-1.0-2/lagsarlmtree/NEWS.md |only lagsarlmtree-1.0-2/lagsarlmtree/build/partial.rdb |binary lagsarlmtree-1.0-2/lagsarlmtree/data/GrowthNUTS2.rda |binary lagsarlmtree-1.0-2/lagsarlmtree/data/WeightsNUTS2.rda |binary lagsarlmtree-1.0-2/lagsarlmtree/man/WeightsNUTS2.Rd | 7 ++++--- lagsarlmtree-1.0-2/lagsarlmtree/man/lagsarlmtree.Rd | 2 +- 9 files changed, 22 insertions(+), 19 deletions(-)
Title: Local Large Language Model Inference Engine
Description: Enables R users to run large language models locally using 'GGUF' model files
and the 'llama.cpp' inference engine. Provides a complete R interface for loading models,
generating text completions, and streaming responses in real-time. Supports local
inference without requiring cloud APIs or internet connectivity, ensuring complete
data privacy and control. Based on the 'llama.cpp' project by Georgi Gerganov (2023) <https://github.com/ggml-org/llama.cpp>.
Author: Pawan Rama Mali [aut, cre, cph],
Georgi Gerganov [aut, cph] ,
The ggml authors [cph] ,
Jeffrey Quesnelle [ctb, cph] ,
Bowen Peng [ctb, cph] ,
pi6am [ctb] ,
Ivan Yurchenko [ctb] ,
Dirk Eddelbuettel [ctb]
Maintainer: Pawan Rama Mali <prm@outlook.in>
This is a re-admission after prior archival of version 0.1.0 dated 2025-09-22
Diff between edgemodelr versions 0.1.0 dated 2025-09-22 and 0.1.4 dated 2026-01-22
edgemodelr-0.1.0/edgemodelr/src/r_output_redirect.h |only edgemodelr-0.1.4/edgemodelr/DESCRIPTION | 37 edgemodelr-0.1.4/edgemodelr/LICENSE | 2 edgemodelr-0.1.4/edgemodelr/MD5 | 80 edgemodelr-0.1.4/edgemodelr/NAMESPACE | 8 edgemodelr-0.1.4/edgemodelr/R/api.R | 1008 +++++++++- edgemodelr-0.1.4/edgemodelr/R/edgemodelr-package.R | 2 edgemodelr-0.1.4/edgemodelr/R/ollama.R |only edgemodelr-0.1.4/edgemodelr/R/zzz.R | 8 edgemodelr-0.1.4/edgemodelr/cleanup |only edgemodelr-0.1.4/edgemodelr/inst/CITATION |only edgemodelr-0.1.4/edgemodelr/inst/COPYRIGHTS |only edgemodelr-0.1.4/edgemodelr/inst/examples/07_modern_bslib_streaming_chat.R |only edgemodelr-0.1.4/edgemodelr/inst/examples/ollama_integration_example.R |only edgemodelr-0.1.4/edgemodelr/inst/examples/small_model_optimization_example.R |only edgemodelr-0.1.4/edgemodelr/inst/include |only edgemodelr-0.1.4/edgemodelr/man/dot-download_with_curl.Rd |only edgemodelr-0.1.4/edgemodelr/man/dot-download_with_r.Rd |only edgemodelr-0.1.4/edgemodelr/man/dot-download_with_wget.Rd |only edgemodelr-0.1.4/edgemodelr/man/dot-is_valid_gguf_file.Rd |only edgemodelr-0.1.4/edgemodelr/man/dot-robust_download.Rd |only edgemodelr-0.1.4/edgemodelr/man/edge_benchmark.Rd |only edgemodelr-0.1.4/edgemodelr/man/edge_clean_cache.Rd | 4 edgemodelr-0.1.4/edgemodelr/man/edge_download_model.Rd | 80 edgemodelr-0.1.4/edgemodelr/man/edge_download_url.Rd |only edgemodelr-0.1.4/edgemodelr/man/edge_find_gguf_models.Rd |only edgemodelr-0.1.4/edgemodelr/man/edge_find_ollama_models.Rd |only edgemodelr-0.1.4/edgemodelr/man/edge_load_ollama_model.Rd |only edgemodelr-0.1.4/edgemodelr/man/edge_small_model_config.Rd |only edgemodelr-0.1.4/edgemodelr/man/edgemodelr-package.Rd | 6 edgemodelr-0.1.4/edgemodelr/man/test_ollama_model_compatibility.Rd |only edgemodelr-0.1.4/edgemodelr/src/Makevars | 31 edgemodelr-0.1.4/edgemodelr/src/Makevars.win | 86 edgemodelr-0.1.4/edgemodelr/src/RcppExports.cpp | 2 edgemodelr-0.1.4/edgemodelr/src/bindings.cpp | 316 ++- edgemodelr-0.1.4/edgemodelr/src/ggml/ggml-backend-reg.cpp | 149 + edgemodelr-0.1.4/edgemodelr/src/ggml/ggml-cpu/ggml-cpu.c | 20 edgemodelr-0.1.4/edgemodelr/src/ggml/ggml-cpu/ops.h | 10 edgemodelr-0.1.4/edgemodelr/src/ggml/ggml-cpu/unary-ops.cpp | 2 edgemodelr-0.1.4/edgemodelr/src/ggml/ggml-opt.cpp | 2 edgemodelr-0.1.4/edgemodelr/src/ggml/ggml-quants.c | 25 edgemodelr-0.1.4/edgemodelr/src/ggml/ggml.c | 20 edgemodelr-0.1.4/edgemodelr/src/ggml/ggml.h | 7 edgemodelr-0.1.4/edgemodelr/src/llama/llama-grammar.cpp | 2 edgemodelr-0.1.4/edgemodelr/src/llama/llama-impl.cpp | 2 edgemodelr-0.1.4/edgemodelr/src/llama/llama-impl.h | 5 edgemodelr-0.1.4/edgemodelr/src/llama/llama-model.cpp | 2 edgemodelr-0.1.4/edgemodelr/src/llama/llama-quant.cpp | 2 edgemodelr-0.1.4/edgemodelr/src/llama/unicode.cpp | 2 edgemodelr-0.1.4/edgemodelr/tests/testthat/test-e2e-integration.R |only edgemodelr-0.1.4/edgemodelr/tests/testthat/test-model-loading.R | 24 edgemodelr-0.1.4/edgemodelr/tests/testthat/test-small-model-config.R |only edgemodelr-0.1.4/edgemodelr/tests/testthat/test-utility-functions.R |only 53 files changed, 1590 insertions(+), 354 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-12-04 0.1.1
2017-07-08 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-12-18 1.3.0
2017-04-08 1.2.0
2016-09-02 1.1.1
2015-10-29 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-04-20 1.2.1
2016-11-16 1.2.0
2016-11-08 1.1.0
2016-07-21 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-05-09 0.15.1
2016-09-06 0.15.0
2016-02-12 0.13.10
2016-02-11 0.13.9
2015-07-29 0.13.7
2015-06-19 0.13.6
2015-03-06 0.13.4
2014-12-17 0.13.2
2014-11-21 0.13.1
2014-07-19 0.12.1
2014-06-25 0.11.0
2014-06-09 0.10.0
2014-05-28 0.9.1
2014-05-19 0.9.0
2014-03-13 0.8.1
2014-02-28 0.8
2014-02-12 0.7
2013-12-06 0.6
2013-11-11 0.5
2013-10-28 0.4
2013-08-13 0.3
2013-08-06 0.2
2013-05-09 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-11-16 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-06-05 1.0.0
Title: Fitting Multivariate Bidirectional Mendelian Randomization
Networks Using Bayesian Directed Cyclic Graphical Models
Description: Addressing a central challenge encountered in Mendelian randomization (MR) studies, where MR primarily focuses on discerning the effects of individual exposures on specific outcomes and establishes causal links between them. Using a network-based methodology, the intricacy involving interdependent outcomes due to numerous factors has been tackled through this routine. Based on Ni et al. (2018) <doi:10.1214/17-BA1087>, 'MR.RGM' extends to a broader exploration of the causal landscape by leveraging on network structures and involves the construction of causal graphs that capture interactions between response variables and consequently between responses and instrument variables. The resulting Graph visually represents these causal connections, showing directed edges with effect sizes labeled. 'MR.RGM' facilitates the navigation of various data availability scenarios effectively by accommodating three input formats, i.e., individual-level data and two types of summary-level data. The [...truncated...]
Author: Bitan Sarkar [aut, cre],
Yang Ni [aut]
Maintainer: Bitan Sarkar <bitan@tamu.edu>
Diff between MR.RGM versions 0.0.5 dated 2025-09-29 and 0.1.0 dated 2026-01-22
MR.RGM-0.0.5/MR.RGM/src/Generate.cpp |only MR.RGM-0.0.5/MR.RGM/src/code.cpp |only MR.RGM-0.1.0/MR.RGM/DESCRIPTION | 19 MR.RGM-0.1.0/MR.RGM/MD5 | 55 MR.RGM-0.1.0/MR.RGM/NAMESPACE | 1 MR.RGM-0.1.0/MR.RGM/R/Imports.R |only MR.RGM-0.1.0/MR.RGM/R/NetworkMotif.R | 2 MR.RGM-0.1.0/MR.RGM/R/RGM.R | 1371 ++++++++-- MR.RGM-0.1.0/MR.RGM/R/RcppExports.R | 100 MR.RGM-0.1.0/MR.RGM/README.md | 382 +- MR.RGM-0.1.0/MR.RGM/inst |only MR.RGM-0.1.0/MR.RGM/man/NetworkMotif.Rd | 2 MR.RGM-0.1.0/MR.RGM/man/RGM.Rd | 221 - MR.RGM-0.1.0/MR.RGM/man/figures/README-unnamed-chunk-11-1.png |binary MR.RGM-0.1.0/MR.RGM/man/figures/README-unnamed-chunk-11-2.png |binary MR.RGM-0.1.0/MR.RGM/man/figures/README-unnamed-chunk-12-2.png |only MR.RGM-0.1.0/MR.RGM/man/figures/README-unnamed-chunk-14-1.png |only MR.RGM-0.1.0/MR.RGM/man/figures/README-unnamed-chunk-8-1.png |binary MR.RGM-0.1.0/MR.RGM/src/NetworkMotif.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_Diag.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_Diag_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_Diag_Star.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_Diag_Star_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_IW.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_IW_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_IW_Star.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_IW_Star_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_SSSL.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_SSSL_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_SSSL_Star.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_SpikeSlab_SSSL_Star_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_Diag.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_Diag_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_Diag_Star.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_Diag_Star_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_IW.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_IW_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_IW_Star.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_IW_Star_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_SSSL.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_SSSL_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_SSSL_Star.cpp |only MR.RGM-0.1.0/MR.RGM/src/RGM_Threshold_SSSL_Star_Covariates.cpp |only MR.RGM-0.1.0/MR.RGM/src/RcppExports.cpp | 641 ++-- 44 files changed, 2051 insertions(+), 743 deletions(-)
Title: Wavelet System Prediction
Description: The wavelet-based variance transformation method is used for system modelling and prediction. It refines predictor spectral representation using Wavelet Theory, which leads to improved model specifications and prediction accuracy. Details of methodologies used in the package can be found in Jiang, Z., Sharma, A., & Johnson, F. (2020) <doi:10.1029/2019WR026962>, Jiang, Z., Rashid, M. M., Johnson, F., & Sharma, A. (2020) <doi:10.1016/j.envsoft.2020.104907>, and Jiang, Z., Sharma, A., & Johnson, F. (2021) <doi:10.1016/J.JHYDROL.2021.126816>.
Author: Ze Jiang [aut, cre] ,
Md. Mamunur Rashid [aut] ,
Ashish Sharma [aut] ,
Fiona Johnson [aut]
Maintainer: Ze Jiang <ze.jiang@unsw.edu.au>
Diff between WASP versions 1.4.4 dated 2024-07-20 and 1.4.5 dated 2026-01-22
DESCRIPTION | 21 MD5 | 14 build/vignette.rds |binary data/datalist | 22 inst/doc/WASP.R | 1587 ++++++++--------- inst/doc/WASP.Rmd | 9 inst/doc/WASP.html | 4680 ++++++++++++++++++++++++++--------------------------- vignettes/WASP.Rmd | 9 8 files changed, 3172 insertions(+), 3170 deletions(-)
Title: Exploratory Data Analysis for the 'spatstat' Family
Description: Functionality for exploratory data analysis and nonparametric analysis of
spatial data, mainly spatial point patterns,
in the 'spatstat' family of packages.
(Excludes analysis of spatial data on a linear network,
which is covered by the separate package 'spatstat.linnet'.)
Methods include quadrat counts, K-functions and their simulation envelopes, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross-validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics, and kernel estimates of covariate effects. Formal hypothesis tests of random pattern (chi-squared, Kolmogorov-Smirnov, Monte Carlo, Diggle-Cressie-Loosmore-Ford, Dao-Genton, two-stage Monte Carlo) and tests for covariate effects (Cox-Berman-Waller-Lawson, Kolmogorov-Smirnov, ANOVA) are also supported.
Author: Adrian Baddeley [aut, cre, cph] ,
Rolf Turner [aut, cph] ,
Ege Rubak [aut, cph] ,
Kasper Klitgaard Berthelsen [ctb],
Warick Brown [cph],
Achmad Choiruddin [ctb],
Ya-Mei Chang [ctb],
Jean-Francois Coeurjolly [ctb],
Lucia Cobo Sanchez [ctb, cph],
Ottma [...truncated...]
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between spatstat.explore versions 3.6-0 dated 2025-11-22 and 3.7-0 dated 2026-01-22
DESCRIPTION | 18 +-- MD5 | 178 +++++++++++++++++------------------ NAMESPACE | 2 NEWS | 48 +++++++++ R/FGmultiInhom.R | 20 ++-- R/Fest.R | 6 - R/Gest.R | 7 - R/Gmulti.R | 24 ++-- R/Jest.R | 8 + R/Jinhom.R | 15 +-- R/Jmulti.R | 21 ++-- R/Kinhom.R | 6 - R/Kmulti.R | 27 ++--- R/Kmulti.inhom.R | 16 +-- R/Ksector.R | 6 - R/bw.CvL.R | 2 R/bw.CvL.adaptive.R | 2 R/bw.diggle.R | 2 R/cdftest.R | 2 R/clarkevans.R | 2 R/clusterset.R | 4 R/compileCDF.R | 2 R/exactppm.R | 6 + R/fasp.R | 16 ++- R/hasenvelope.R | 2 R/laslett.R | 2 R/localpcf.R | 2 R/markcorr.R | 194 +++++++++++++++++++++++++-------------- R/metriccontact.R | 6 - R/nncount.R | 2 R/pairs.im.R | 2 R/pcf.R | 6 - R/pcfinhom.R | 6 - R/pcfmulti.R | 14 +- R/pcfmulti.inhom.R | 14 +- R/plot.fasp.R | 145 ++++++++++++++++------------- R/plot.fv.R | 12 +- R/rho2hat.R | 2 R/rhohat.R | 2 R/smoothfun.R | 2 R/spatialcdf.R | 2 R/ssf.R | 2 R/tolcon.R | 2 R/transect.R | 2 inst/doc/packagesizes.txt | 1 inst/info/packagesizes.txt | 1 man/Emark.Rd | 8 + man/Fest.Rd | 6 + man/Finhom.Rd | 6 + man/FmultiInhom.Rd | 8 + man/Gcross.Rd | 7 + man/Gcross.inhom.Rd | 6 + man/Gdot.Rd | 7 + man/Gdot.inhom.Rd | 7 + man/Gest.Rd | 6 + man/Ginhom.Rd | 6 + man/Gmulti.Rd | 6 + man/GmultiInhom.Rd | 8 + man/Jcross.Rd | 6 + man/Jdot.Rd | 6 + man/Jest.Rd | 6 + man/Jinhom.Rd | 6 + man/Jmulti.Rd | 8 + man/Kcross.Rd | 9 + man/Kcross.inhom.Rd | 7 + man/Kdot.Rd | 8 + man/Kdot.inhom.Rd | 7 + man/Kinhom.Rd | 5 - man/Kmark.Rd | 6 + man/Kmulti.inhom.Rd | 6 + man/Ksector.Rd | 6 + man/markconnect.Rd | 6 + man/markcorr.Rd | 56 ++++++++--- man/markcrosscorr.Rd | 15 ++- man/markequal.Rd | 6 + man/markvario.Rd | 6 + man/pcf.ppp.Rd | 6 + man/pcfcross.Rd | 6 + man/pcfcross.inhom.Rd | 6 + man/pcfdot.Rd | 6 + man/pcfdot.inhom.Rd | 6 + man/pcfinhom.Rd | 7 + man/pcfmulti.Rd | 6 + man/plot.fasp.Rd | 7 + man/rectcontact.Rd | 7 + man/spatstat.explore-internal.Rd | 4 man/spatstat.explore-package.Rd | 2 tests/testsEtoF.R | 16 +++ tests/testsGtoJ.R | 2 tests/testsS.R | 45 +++++++++ 90 files changed, 828 insertions(+), 417 deletions(-)
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Title: Radiocarbon Equations
Description: Provides functions for the calibration of radiocarbon dates, as well as options to calculate different radiocarbon-related timescales (cal BP, cal BC/AD, C14 age, F14C, pMC, D14C) and estimating the effects of contamination or local reservoir offsets (Reimer and Reimer 2001 <doi:10.1017/S0033822200038339>). The methods follow long-established recommendations such as Stuiver and Polach (1977) <doi:10.1017/S0033822200003672> and Reimer et al. (2004) <doi:10.1017/S0033822200033154>. This package uses the calibration curves from the data package 'rintcal'.
Author: Maarten Blaauw [aut, cre] ,
Paula Reimer [ctb] ,
Vegard Martinsen [ctb]
Maintainer: Maarten Blaauw <maarten.blaauw@qub.ac.uk>
Diff between rice versions 1.6.0 dated 2026-01-08 and 1.6.2 dated 2026-01-22
DESCRIPTION | 6 +- MD5 | 26 ++++----- NEWS.md | 8 ++ R/calibrate.R | 6 +- R/marine.R | 140 ++++++++++++++------------------------------------- R/rice.R | 1 README.md | 7 -- build/partial.rdb |binary build/vignette.rds |binary data/shells.rda |binary inst/doc/rice.R | 16 ++++- inst/doc/rice.Rmd | 20 +++++-- inst/doc/rice.html | 144 ++++++++++++++++++++++++++--------------------------- vignettes/rice.Rmd | 20 +++++-- 14 files changed, 186 insertions(+), 208 deletions(-)
Title: (Randomized) Quasi-Random Number Generators
Description: Functionality for generating (randomized) quasi-random numbers in
high dimensions.
Author: Marius Hofert [aut, cre],
Christiane Lemieux [aut]
Maintainer: Marius Hofert <mhofert@hku.hk>
Diff between qrng versions 0.0-10 dated 2024-02-29 and 0.0-11 dated 2026-01-22
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/qrng.R | 2 ++ demo/test_functions.R | 5 +++-- 4 files changed, 12 insertions(+), 9 deletions(-)
Title: Easily Create Presentation-Ready Display Tables
Description: Build display tables from tabular data with an easy-to-use
set of functions. With its progressive approach, we can construct
display tables with a cohesive set of table parts. Table values can be
formatted using any of the included formatting functions. Footnotes
and cell styles can be precisely added through a location targeting
system. The way in which 'gt' handles things for you means that you
don't often have to worry about the fine details.
Author: Richard Iannone [aut, cre] ,
Joe Cheng [aut],
Barret Schloerke [aut] ,
Shannon Haughton [aut],
Ellis Hughes [aut] ,
Alexandra Lauer [aut] ,
Romain Francois [aut],
JooYoung Seo [aut] ,
Ken Brevoort [aut] ,
Olivier Roy [aut],
Posit Software, PBC [cph, [...truncated...]
Maintainer: Richard Iannone <rich@posit.co>
Diff between gt versions 1.2.0 dated 2025-12-16 and 1.3.0 dated 2026-01-22
DESCRIPTION | 16 LICENSE | 2 MD5 | 265 ++++----- NAMESPACE | 2 NEWS.md | 28 R/as_data_frame.R | 2 R/build_data.R | 11 R/cols_add.R | 2 R/cols_align.R | 2 R/cols_align_decimal.R | 2 R/cols_hide.R | 2 R/cols_label.R | 2 R/cols_merge.R | 2 R/cols_move.R | 2 R/cols_units.R | 2 R/cols_width.R | 2 R/compile_scss.R | 22 R/data_color.R | 2 R/datasets.R | 2 R/dt__.R | 2 R/dt_body.R | 11 R/dt_boxhead.R | 2 R/dt_cols_merge.R | 2 R/dt_data.R | 2 R/dt_footnotes.R | 2 R/dt_formats.R | 2 R/dt_groups_rows.R | 2 R/dt_has_built.R | 2 R/dt_heading.R | 2 R/dt_locale.R | 2 R/dt_options.R | 3 R/dt_row_groups.R | 2 R/dt_row_order.R |only R/dt_source_notes.R | 2 R/dt_spanners.R | 2 R/dt_stub_df.R | 101 +++ R/dt_stubhead.R | 2 R/dt_styles.R | 2 R/dt_substitutions.R | 2 R/dt_summary.R | 2 R/dt_summary_cols.R | 2 R/dt_transforms.R | 2 R/export.R | 2 R/extract.R | 6 R/fmt.R | 21 R/fmt_date_time.R | 2 R/fmt_number.R | 21 R/format_data.R | 41 - R/format_vec.R | 4 R/gt-package.R | 2 R/gt.R | 3 R/gt_group.R | 2 R/gt_preview.R | 2 R/gt_split.R | 2 R/gtsave.R | 2 R/helpers.R | 12 R/image.R | 2 R/info_tables.R | 613 ++++++++++++++++++++- R/knitr-utils.R | 4 R/location_methods.R | 2 R/modify_rows.R | 177 ++++++ R/nanoplot.R | 2 R/opts.R | 2 R/print.R | 2 R/quarto.R | 2 R/reexports.R | 2 R/render_as_html.R | 2 R/render_as_i_html.R | 2 R/resolver.R | 12 R/rows_add.R | 4 R/shiny.R | 2 R/substitution.R | 2 R/summary_columns.R | 6 R/summary_rows.R | 2 R/tab_create_modify.R | 12 R/tab_footnote.R | 14 R/tab_info.R | 2 R/tab_options.R | 15 R/tab_remove.R | 2 R/tab_style.R | 25 R/tab_style_body.R | 2 R/text_transform.R | 2 R/topics.R | 2 R/utils.R | 21 R/utils_color_contrast.R | 2 R/utils_environments.R | 2 R/utils_examples.R | 2 R/utils_general_str_formatting.R | 2 R/utils_plots.R | 2 R/utils_render_common.R | 24 R/utils_render_grid.R | 7 R/utils_render_html.R | 54 + R/utils_render_latex.R | 490 ++++++++++++++-- R/utils_render_rtf.R | 22 R/utils_render_xml.R | 2 R/utils_units.R | 2 R/z_utils_render_footnotes.R | 2 R/zzz.R | 3 inst/gt_tables/fa_icons_vec.rds |binary inst/gt_tables/info_conversions.rds |binary inst/gt_tables/info_flags.rds |binary inst/gt_tables/info_google_fonts.rds |binary inst/gt_tables/info_icons.rds |binary inst/gt_tables/info_paletteer.rds |binary man/cells_stub.Rd | 14 man/fmt_currency.Rd | 8 man/fmt_integer.Rd | 8 man/fmt_number.Rd | 8 man/fmt_number_si.Rd | 2 man/fmt_tf.Rd | 8 man/grand_summary_rows.Rd | 1 man/info_currencies.Rd | 1 man/info_date_style.Rd | 1 man/info_flags.Rd | 3 man/info_google_fonts.Rd | 1 man/info_icons.Rd | 3 man/info_locales.Rd | 1 man/info_paletteer.Rd | 1 man/info_tf_style.Rd |only man/info_time_style.Rd | 1 man/info_unit_conversions.Rd | 3 man/row_group_order.Rd | 1 man/row_order.Rd |only man/rows_add.Rd | 3 man/summary_columns.Rd | 5 man/summary_rows.Rd | 1 man/tab_options.Rd | 8 man/vec_fmt_number_si.Rd | 2 tests/testthat/Rplots.pdf |binary tests/testthat/helper-gt_object.R | 4 tests/testthat/test-l_cell_text_alignment.R | 198 ++++++ tests/testthat/test-l_cols_align.R | 35 + tests/testthat/test-l_cols_width.R | 137 ++++ tests/testthat/test-multicolumn_stub_latex.R | 78 ++ tests/testthat/test-multicolumn_stub_na_handling.R | 24 135 files changed, 2272 insertions(+), 486 deletions(-)
Title: Functions to Create Publication-Quality Plots
Description: Contains several plotting functions such as barplots, scatterplots, heatmaps, as well as functions to combine plots and assist in the creation of these plots. These functions will give users great ease of use and customization options in broad use for biomedical applications, as well as general purpose plotting. Each of the functions also provides valid default settings to make plotting data more efficient and producing high quality plots with standard colour schemes simpler. All functions within this package are capable of producing plots that are of the quality to be presented in scientific publications and journals. P'ng et al.; BPG: Seamless, automated and interactive visualization of scientific data; BMC Bioinformatics 2019 <doi:10.1186/s12859-019-2610-2>.
Author: Paul Boutros [aut, cre],
Christine P'ng [ctb],
Jeff Green [ctb],
Stephenie Prokopec [ctb],
Ontario Institute for Cancer Research [cph],
The R Core Team [cph],
The R Foundation [cph],
Robert Gentleman [ctb],
Ross Ihaka [ctb],
Caden Bugh [ctb],
Dan Kni [...truncated...]
Maintainer: Paul Boutros <PBoutros@sbpdiscovery.org>
Diff between BoutrosLab.plotting.general versions 7.1.2 dated 2024-10-04 and 7.1.5 dated 2026-01-22
BoutrosLab.plotting.general-7.1.2/BoutrosLab.plotting.general/NEWS |only BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/DESCRIPTION | 21 BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/MD5 | 21 BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/NEWS.md | 26 BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/R/create.violinplot.R | 527 +++++----- BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/R/force.colour.scheme.R | 6 BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/R/legend.grob.R | 4 BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/build/vignette.rds |binary BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/inst/doc/PlottingGuide.pdf |binary BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/man/create.heatmap.Rd | 2 BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/man/create.violinplot.Rd | 14 BoutrosLab.plotting.general-7.1.5/BoutrosLab.plotting.general/man/legend.grob.Rd | 2 12 files changed, 343 insertions(+), 280 deletions(-)
More information about BoutrosLab.plotting.general at CRAN
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