Title: Temporal Altitudinal Biogeographic Shifts
Description: A standardized workflow to reconstruct spatial configurations of altitude-bounded biogeographic systems over time. For example, 'tabs' can model how island archipelagos expand or contract with changing sea levels or how alpine biomes shift in response to tree line movements. It provides functionality to account for various geophysical processes such as crustal deformation and other tectonic changes, allowing for a more accurate representation of biogeographic system dynamics. For more information see De Groeve et al. (2025) <doi:10.21425/fob.18.151677>.
Author: Johannes De Groeve [aut, cre] ,
Sietze Norder [aut] ,
Eline Sterre Rentier [aut] ,
Suzette Flantua [ctb] ,
Kenneth Rijsdijk [ctb]
Maintainer: Johannes De Groeve <j.degroeve@uva.nl>
This is a re-admission after prior archival of version 0.1.1 dated 2025-04-29
Diff between tabs versions 0.1.1 dated 2025-04-29 and 0.2.0 dated 2026-02-25
DESCRIPTION | 24 ++- MD5 | 30 ++-- NAMESPACE | 12 + R/add_peaks.R | 2 R/explore.R | 345 +++++++++++++++++++++++++++--------------------------- R/extent.R | 13 +- R/get_data.R | 10 + R/get_groups.R |only R/get_reclabs.R | 45 ++++++- R/get_region.R | 24 ++- R/get_tree.R |only R/metrics.R | 208 -------------------------------- R/setup.R | 16 ++ README.md | 2 build/partial.rdb |binary man/get_groups.Rd |only man/get_tree.Rd |only man/get_tsi.Rd |only man/regroup.Rd |only 19 files changed, 305 insertions(+), 426 deletions(-)
Title: A 'Shiny' Tool to Create Interactive Catalogues for Geospatial
Data
Description: Seamlessly create interactive online catalogues for geospatial data. Items can be mapped as points or areas and retrieved using either a map or a dynamic table with search form and optional column filters.
Author: Sebastien Plutniak [aut, cre]
Maintainer: Sebastien Plutniak <sebastien.plutniak@posteo.net>
This is a re-admission after prior archival of version 0.1.3 dated 2025-08-27
Diff between spatialCatalogueViewer versions 0.1.3 dated 2025-08-27 and 0.2.0 dated 2026-02-25
DESCRIPTION | 10 +++++----- MD5 | 12 ++++++------ NAMESPACE | 3 +-- NEWS.md | 10 ++++++++++ R/app_server.R | 26 +++++++++++++++----------- R/spatialCatalogueViewer.R | 21 +++++++++++++++++++-- man/spatialCatalogueViewer.Rd | 13 ++++++++++--- 7 files changed, 66 insertions(+), 29 deletions(-)
More information about spatialCatalogueViewer at CRAN
Permanent link
Title: Gaussian Mixture Graphical Model Learning and Inference
Description: Gaussian mixture graphical models include Bayesian networks and
dynamic Bayesian networks (their temporal extension) whose local probability
distributions are described by Gaussian mixture models. They are powerful
tools for graphically and quantitatively representing nonlinear dependencies
between continuous variables. This package provides a complete framework to
create, manipulate, learn the structure and the parameters, and perform
inference in these models. Most of the algorithms are described in the PhD
thesis of Roos (2018) <https://theses.hal.science/tel-01943718>.
Author: Jeremy Roos [aut, cre, cph],
RATP Group [fnd, cph]
Maintainer: Jeremy Roos <jeremy.roos@gmail.com>
Diff between gmgm versions 1.1.2 dated 2022-09-08 and 1.1.3 dated 2026-02-25
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS.md | 5 +++++ R/data_air.R | 2 +- R/network.R | 2 +- man/data_air.Rd | 2 +- 6 files changed, 17 insertions(+), 12 deletions(-)
Title: Fine-Gray Regression via Forward-Backward Scan
Description: In competing risks regression, the proportional subdistribution hazards (PSH) model is popular for its direct assessment of covariate effects on the cumulative incidence function. This package allows for both penalized and unpenalized PSH regression in linear time using a novel forward-backward scan. Penalties include Ridge, Lease Absolute Shrinkage and Selection Operator (LASSO), Smoothly Clipped Absolute Deviation (SCAD), Minimax Concave Plus (MCP), and elastic net <doi: 10.32614/RJ-2021-010>.
Author: Eric S. Kawaguchi [aut, cre]
Maintainer: Eric S. Kawaguchi <ekawaguc@usc.edu>
This is a re-admission after prior archival of version 1.24.10 dated 2024-10-28
Diff between fastcmprsk versions 1.24.10 dated 2024-10-28 and 1.26.1 dated 2026-02-25
fastcmprsk-1.24.10/fastcmprsk/src/Makevars |only fastcmprsk-1.26.1/fastcmprsk/DESCRIPTION | 8 ++++---- fastcmprsk-1.26.1/fastcmprsk/MD5 | 5 ++--- fastcmprsk-1.26.1/fastcmprsk/README.md | 2 +- 4 files changed, 7 insertions(+), 8 deletions(-)
Title: Easy Visualization of Conditional Effects from Regression Models
Description: Offers a flexible and user-friendly interface for visualizing conditional
effects from a broad range of regression models, including mixed-effects and generalized
additive (mixed) models. Compatible model types include lm(), rlm(), glm(), glm.nb(),
betareg(), and gam() (from 'mgcv'); nonlinear models via nls(); generalized least
squares via gls(); and survival models via coxph() (from 'survival').
Mixed-effects models with random intercepts and/or slopes can be fitted using lmer(),
glmer(), glmer.nb(), glmmTMB(), or gam() (from 'mgcv', via smooth terms).
Plots are rendered using base R graphics with extensive customization options.
Approximate confidence intervals for nls() and betareg() models are computed using
the delta method. Robust standard errors for rlm() are computed using the sandwich
estimator (Zeileis 2004) <doi:10.18637/jss.v011.i10>. For beta regression using
'betareg', see Cribari-Neto and Zeileis (2010) <doi:10.18637/jss.v034.i02>. For
mixed-effects models w [...truncated...]
Author: Luca Corlatti [aut, cre]
Maintainer: Luca Corlatti <lucac1980@yahoo.it>
Diff between easyViz versions 2.0.1 dated 2026-01-24 and 2.0.2 dated 2026-02-25
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS.md | 7 ++++++- R/ez-utils.R | 16 +++++++++++++--- 4 files changed, 26 insertions(+), 11 deletions(-)
Title: Systematically Run R CMD Checks
Description: Systematically Run R checks against multiple packages. Checks are run in
parallel with strategies to minimize dependency installation. Provides
out of the box interface for running reverse dependency check.
Author: Szymon Maksymiuk [cre, aut] ,
Doug Kelkhoff [aut] ,
F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Szymon Maksymiuk <sz.maksymiuk@gmail.com>
Diff between checked versions 0.5.0 dated 2026-02-20 and 0.5.1 dated 2026-02-25
DESCRIPTION | 6 +++--- MD5 | 37 +++++++++++++++++++------------------ NAMESPACE | 4 ++++ NEWS.md | 8 ++++++++ R/results.R | 31 ++++++++++++++++++++++++++++--- R/run.R | 10 +++++----- R/task.R | 4 ++-- R/utils-enums.R | 4 +++- man/STATUS.Rd | 10 +++++++++- man/check_pkgs.Rd | 1 + man/check_rev_deps.Rd | 1 + man/checker.Rd | 1 + man/new_checker.Rd | 2 ++ man/print.checked_results.Rd | 3 ++- man/results.Rd | 3 ++- man/results_to_df.Rd |only man/run.Rd | 2 +- tests/testthat/_snaps/deps.md | 4 ++-- tests/testthat/test-check.R | 3 +++ tests/testthat/test-deps.R | 10 ++++++++++ 20 files changed, 106 insertions(+), 38 deletions(-)
Title: Simulate, Evaluate, and Analyze Dose Finding Trials with
Bayesian MCPMod
Description: Bayesian MCPMod (Fleischer et al. (2022)
<doi:10.1002/pst.2193>) is an innovative method that improves the
traditional MCPMod by systematically incorporating historical data,
such as previous placebo group data. This package offers functions
for simulating, analyzing, and evaluating Bayesian MCPMod trials with
normally and binary distributed endpoints. It enables the assessment of trial
designs incorporating historical data across various true
dose-response relationships and sample sizes. Robust mixture prior
distributions, such as those derived with the Meta-Analytic-Predictive
approach (Schmidli et al. (2014) <doi:10.1111/biom.12242>), can be
specified for each dose group. Resulting mixture posterior
distributions are used in the Bayesian Multiple Comparison Procedure
and modeling steps. The modeling step also includes a weighted model
averaging approach (Pinheiro et al. (2014) <doi:10.1002/sim.6052>).
Estimated dose-response relationships can be bootstrapped and
v [...truncated...]
Author: Boehringer Ingelheim Pharma GmbH & Co. KG [cph, fnd],
Stephan Wojciekowski [aut, cre],
Lars Andersen [aut],
Jonas Schick [ctb],
Sebastian Bossert [aut]
Maintainer: Stephan Wojciekowski <stephan.wojciekowski@boehringer-ingelheim.com>
Diff between BayesianMCPMod versions 1.3.0 dated 2026-02-23 and 1.3.1 dated 2026-02-25
DESCRIPTION | 6 ++--- MD5 | 26 +++++++++++----------- NEWS.md | 7 +++++- R/BMCPMod.R | 5 ---- R/assessDesign.R | 2 - R/bootstrapping.R | 5 ---- R/plot.R | 42 +++++++++++++++++++----------------- R/utils.R | 14 ++++++++++-- inst/doc/Simulation_Comparison.html | 4 +-- inst/doc/Simulation_Example.html | 4 +-- inst/doc/analysis_normal.html | 4 +-- inst/doc/binary_endpoint.html | 4 +-- man/assessDesign.Rd | 4 +++ man/plot.modelFits.Rd | 14 ++++++------ 14 files changed, 79 insertions(+), 62 deletions(-)
More information about BayesianMCPMod at CRAN
Permanent link
Title: Utilities for Producing Maps
Description: Provides a minimal, light-weight set of tools for producing nice looking maps in R, with support for map projections. See Brown (2016) <doi:10.32614/RJ-2016-005>.
Author: Patrick Brown [aut, cre, cph]
Maintainer: Patrick Brown <patrick.brown@utoronto.ca>
Diff between mapmisc versions 2.1.2 dated 2026-01-12 and 2.1.3 dated 2026-02-25
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- R/wrapPoly.R | 15 ++++++++++----- inst/doc/mapmisc.pdf |binary inst/doc/north.html | 29 ++++++++++++++++------------- inst/doc/perspective.html | 32 ++++++++++++++++---------------- 6 files changed, 51 insertions(+), 43 deletions(-)
Title: Create Interactive Gantt Charts with Work Breakdown Structure
Description: Create Primavera-style interactive Gantt charts with Work Breakdown
Structure (WBS) hierarchy and activities. Features include color-coded WBS
items, indented labels, scrollable views for large projects, dynamic date
formatting, and the ability to dim past activities. Built on top of 'plotly'
for interactive visualizations.
Author: Ahmed Aredah [aut, cre]
Maintainer: Ahmed Aredah <Ahmed.Aredah@gmail.com>
Diff between ganttify versions 0.2.1 dated 2026-01-22 and 0.2.2 dated 2026-02-25
DESCRIPTION | 6 +- MD5 | 10 ++-- NEWS.md | 12 ++++ R/Ganttify.R | 138 ++++++++++++++++++++++++++++++++------------------------ README.md | 24 +++++++++ man/Ganttify.Rd | 7 ++ 6 files changed, 128 insertions(+), 69 deletions(-)
Title: Utilities for Interacting with the 'Posit Connect' Server API
Description: Provides a helpful 'R6' class and methods for interacting with
the 'Posit Connect' Server API along with some meaningful utility functions
for regular tasks. API documentation varies by 'Posit Connect' installation
and version, but the latest documentation is also hosted publicly at
<https://docs.posit.co/connect/api/>.
Author: Kara Woo [aut, cre],
Toph Allen [aut],
Neal Richardson [aut],
Sean Lopp [aut],
Cole Arendt [aut],
Posit, PBC [cph, fnd]
Maintainer: Kara Woo <kara.woo@posit.co>
Diff between connectapi versions 0.10.0 dated 2026-01-16 and 0.11.0 dated 2026-02-25
connectapi-0.10.0/connectapi/man/get_image.Rd |only connectapi-0.10.0/connectapi/man/set_image.Rd |only connectapi-0.11.0/connectapi/DESCRIPTION | 6 connectapi-0.11.0/connectapi/MD5 | 116 +++++----- connectapi-0.11.0/connectapi/NAMESPACE | 6 connectapi-0.11.0/connectapi/NEWS.md | 17 + connectapi-0.11.0/connectapi/R/connect.R | 10 connectapi-0.11.0/connectapi/R/content.R | 33 ++- connectapi-0.11.0/connectapi/R/get.R | 31 ++ connectapi-0.11.0/connectapi/R/groups.R | 23 +- connectapi-0.11.0/connectapi/R/page.R | 34 +-- connectapi-0.11.0/connectapi/R/parse.R | 40 +-- connectapi-0.11.0/connectapi/R/ptype.R | 5 connectapi-0.11.0/connectapi/R/runtime-caches.R | 2 connectapi-0.11.0/connectapi/R/schedule.R | 49 +++- connectapi-0.11.0/connectapi/R/tags.R | 4 connectapi-0.11.0/connectapi/R/thumbnail.R | 118 ---------- connectapi-0.11.0/connectapi/build/vignette.rds |binary connectapi-0.11.0/connectapi/inst/doc/customize-http.html | 4 connectapi-0.11.0/connectapi/inst/doc/getting-started.html | 4 connectapi-0.11.0/connectapi/man/PositConnect.Rd | 11 - connectapi-0.11.0/connectapi/man/content_delete.Rd | 2 connectapi-0.11.0/connectapi/man/content_item.Rd | 2 connectapi-0.11.0/connectapi/man/content_title.Rd | 2 connectapi-0.11.0/connectapi/man/content_update.Rd | 2 connectapi-0.11.0/connectapi/man/create_random_name.Rd | 2 connectapi-0.11.0/connectapi/man/dashboard_url.Rd | 2 connectapi-0.11.0/connectapi/man/delete_thumbnail.Rd | 2 connectapi-0.11.0/connectapi/man/delete_vanity_url.Rd | 2 connectapi-0.11.0/connectapi/man/deploy_repo.Rd | 2 connectapi-0.11.0/connectapi/man/environment.Rd | 2 connectapi-0.11.0/connectapi/man/get_associations.Rd | 2 connectapi-0.11.0/connectapi/man/get_bundles.Rd | 4 connectapi-0.11.0/connectapi/man/get_jobs.Rd | 2 connectapi-0.11.0/connectapi/man/get_log.Rd | 2 connectapi-0.11.0/connectapi/man/get_thumbnail.Rd | 2 connectapi-0.11.0/connectapi/man/get_usage.Rd | 9 connectapi-0.11.0/connectapi/man/get_vanity_url.Rd | 2 connectapi-0.11.0/connectapi/man/git.Rd | 2 connectapi-0.11.0/connectapi/man/has_thumbnail.Rd | 2 connectapi-0.11.0/connectapi/man/lock_content.Rd | 2 connectapi-0.11.0/connectapi/man/paging.Rd | 9 connectapi-0.11.0/connectapi/man/permissions.Rd | 2 connectapi-0.11.0/connectapi/man/search_content.Rd | 2 connectapi-0.11.0/connectapi/man/set_integrations.Rd | 2 connectapi-0.11.0/connectapi/man/set_run_as.Rd | 2 connectapi-0.11.0/connectapi/man/set_schedule.Rd | 4 connectapi-0.11.0/connectapi/man/set_thumbnail.Rd | 2 connectapi-0.11.0/connectapi/man/set_vanity_url.Rd | 2 connectapi-0.11.0/connectapi/man/swap_vanity_urls.Rd | 2 connectapi-0.11.0/connectapi/man/terminate_jobs.Rd | 2 connectapi-0.11.0/connectapi/man/verify_content_name.Rd | 2 connectapi-0.11.0/connectapi/tests/integrated/test-deploy.R | 132 ------------ connectapi-0.11.0/connectapi/tests/integrated/test-get.R | 5 connectapi-0.11.0/connectapi/tests/integrated/test-lazy.R | 5 connectapi-0.11.0/connectapi/tests/integrated/test-misc.R | 6 connectapi-0.11.0/connectapi/tests/testthat/2026.01.0 |only connectapi-0.11.0/connectapi/tests/testthat/test-content.R | 96 ++++++++ connectapi-0.11.0/connectapi/tests/testthat/test-get.R | 35 +++ connectapi-0.11.0/connectapi/tests/testthat/test-parse.R | 39 +++ 60 files changed, 417 insertions(+), 494 deletions(-)
Title: Testing for Shiny Applications
Description: Automated unit testing of Shiny applications through a
headless 'Chromium' browser.
Author: Barret Schloerke [cre, aut] ,
Posit Software, PBC [cph, fnd] ,
Winston Chang [ctb] ,
Gabor Csardi [ctb] ,
Hadley Wickham [ctb] ,
Mango Solutions [cph, ccp]
Maintainer: Barret Schloerke <barret@posit.co>
Diff between shinytest2 versions 0.5.0 dated 2026-01-09 and 0.5.1 dated 2026-02-25
DESCRIPTION | 11 +- MD5 | 75 ++++++++-------- NEWS.md | 20 ++++ R/record-test.R | 62 +++++++++---- R/test-app.R | 86 +++++++++++++++---- build/vignette.rds |binary inst/doc/in-depth.R | 4 inst/doc/in-depth.Rmd | 4 inst/doc/in-depth.html | 5 - inst/doc/robust.R | 2 inst/doc/robust.Rmd | 2 inst/doc/robust.html | 3 inst/doc/shinytest2.R | 8 - inst/doc/shinytest2.Rmd | 10 +- inst/doc/shinytest2.html | 13 +- inst/doc/use-application-audit.R | 4 inst/doc/use-application-audit.Rmd | 4 inst/doc/use-application-audit.html | 5 - inst/doc/use-ci.html | 1 inst/doc/use-package.R | 57 ++++++++++++ inst/doc/use-package.Rmd | 112 ++++++++++++++++++++++++ inst/doc/use-package.html | 162 ++++++++++++++++++++++++++++++++---- inst/doc/using-monkey-testing.R | 12 +- inst/doc/using-monkey-testing.Rmd | 12 +- inst/doc/using-monkey-testing.html | 13 +- inst/doc/z-migration.html | 1 inst/doc/zzz-faq.Rmd | 4 inst/doc/zzz-faq.html | 12 ++ man/app_support.Rd | 90 ++++++++++++++++---- man/record_test.Rd | 4 tests/testthat/test-not-testing.R | 1 tests/testthat/test-record-test.R |only vignettes/in-depth.Rmd | 4 vignettes/robust.Rmd | 2 vignettes/shinytest2.Rmd | 10 +- vignettes/use-application-audit.Rmd | 4 vignettes/use-package.Rmd | 112 ++++++++++++++++++++++++ vignettes/using-monkey-testing.Rmd | 12 +- vignettes/zzz-faq.Rmd | 4 39 files changed, 768 insertions(+), 179 deletions(-)
More information about HaploDiploidEquilibrium at CRAN
Permanent link
Title: Synthesize Bio API Wrapper
Description: Access Synthesize Bio models from their API <https://app.synthesize.bio/> using
this wrapper that provides a convenient interface to the Synthesize Bio API, allowing users
to generate realistic gene expression data based on specified biological conditions. This package
enables researchers to easily access AI-generated transcriptomic data for various
modalities including bulk RNA-seq, single-cell RNA-seq, microarray data, and more.
Author: Synthesize Bio [aut, cre]
Maintainer: Synthesize Bio <candace@synthesize.bio>
Diff between rsynthbio versions 4.0.1 dated 2026-02-13 and 4.1.0 dated 2026-02-25
rsynthbio-4.0.1/rsynthbio/man/default_output_transformer.Rd |only rsynthbio-4.0.1/rsynthbio/tests/testthat/test-integration-predict-metadata.R |only rsynthbio-4.0.1/rsynthbio/tests/testthat/test-integration-reference-conditioning.R |only rsynthbio-4.0.1/rsynthbio/tests/testthat/test-live-api.R |only rsynthbio-4.1.0/rsynthbio/DESCRIPTION | 6 rsynthbio-4.1.0/rsynthbio/MD5 | 33 +--- rsynthbio-4.1.0/rsynthbio/NEWS.md | 10 + rsynthbio-4.1.0/rsynthbio/R/call_model_api.R | 20 +- rsynthbio-4.1.0/rsynthbio/R/output-transformers.R | 77 +++++++--- rsynthbio-4.1.0/rsynthbio/inst/doc/baseline.Rmd | 4 rsynthbio-4.1.0/rsynthbio/inst/doc/baseline.html | 6 rsynthbio-4.1.0/rsynthbio/inst/doc/reference-conditioning.R | 8 - rsynthbio-4.1.0/rsynthbio/inst/doc/reference-conditioning.Rmd | 14 - rsynthbio-4.1.0/rsynthbio/inst/doc/reference-conditioning.html | 16 +- rsynthbio-4.1.0/rsynthbio/man/OUTPUT_TRANSFORMERS.Rd | 3 rsynthbio-4.1.0/rsynthbio/man/get_output_transformer.Rd | 5 rsynthbio-4.1.0/rsynthbio/man/predict_query.Rd | 4 rsynthbio-4.1.0/rsynthbio/man/transform_metadata_output.Rd |only rsynthbio-4.1.0/rsynthbio/vignettes/baseline.Rmd | 4 rsynthbio-4.1.0/rsynthbio/vignettes/reference-conditioning.Rmd | 14 - 20 files changed, 141 insertions(+), 83 deletions(-)
Title: Retrieve Global River Gauge Data
Description: Provides access to global river gauge data from a variety of national-level river agencies. The package interfaces with the national-level agency websites to provide access to river gauge locations, river discharge, and river stage. Currently, the package is available for the following countries: Australia, Brazil, Canada, Chile, France, Japan, South Africa, the United Kingdom, and the United States.
Author: Ryan Riggs [aut, cre] ,
Simon Moulds [aut] ,
Michel Wortmann [aut] ,
Louise Slater [aut] ,
George Allen [aut]
Maintainer: Ryan Riggs <ryanriggs7@gmail.com>
Diff between RivRetrieve versions 0.1.7 dated 2026-02-18 and 0.1.8 dated 2026-02-25
DESCRIPTION | 6 +- MD5 | 34 +++++++------ NAMESPACE | 4 + NEWS.md | 18 ++++--- R/australia.R | 13 +++-- R/canada.R | 23 +++++--- R/france.R | 4 - R/ireland.R |only R/japan.R | 109 ++++++++++++++++++------------------------ R/scotland.R |only R/southAfrica.R | 118 ++++++++++++++++++++++++++-------------------- R/sysdata.rda |binary README.md | 2 inst/doc/my-vignette.Rmd | 2 inst/doc/my-vignette.html | 11 ++-- man/canada.Rd | 3 - man/ireland.Rd |only man/japan.Rd | 6 +- man/scotland.Rd |only vignettes/my-vignette.Rmd | 2 20 files changed, 190 insertions(+), 165 deletions(-)
Title: Improving Interaction Modelling and Interpretability in Random
Forests
Description: Implementation of the unity forest (UFO) framework (Hornung & Hapfelmeier, 2026,
<doi:10.48550/arXiv.2601.07003>).
UFOs are a random forest variant designed to better take covariates with purely
interaction-based effects into account, including interactions for which none of the involved
covariates exhibits a marginal effect.
While this framework tends to improve discrimination and predictive accuracy compared
to standard random forests, it also facilitates the identification and interpretation of
(marginal or interactive) effects: In addition to the UFO algorithm for tree construction,
the package includes the unity variable importance measure (unity VIM), which quantifies
covariate effects under the conditions in which they are strongest - either marginally
or within subgroups defined by interactions - as well as covariate-representative tree
roots (CRTRs) that provide interpretable visualizations of these conditions.
Categorical and continuous outcomes are supported.
This [...truncated...]
Author: Roman Hornung [aut, cre],
Marvin N. Wright [ctb, cph]
Maintainer: Roman Hornung <hornung@ibe.med.uni-muenchen.de>
Diff between unityForest versions 0.1.0 dated 2026-01-30 and 0.2.0 dated 2026-02-25
unityForest-0.1.0/unityForest/src/Hungarian.cpp |only unityForest-0.1.0/unityForest/src/Hungarian.h |only unityForest-0.2.0/unityForest/DESCRIPTION | 10 unityForest-0.2.0/unityForest/MD5 | 96 unityForest-0.2.0/unityForest/NEWS.md | 10 unityForest-0.2.0/unityForest/R/RcppExports.R | 4 unityForest-0.2.0/unityForest/R/onAttach.R |only unityForest-0.2.0/unityForest/R/predict.unityfor.R | 58 unityForest-0.2.0/unityForest/R/print.R | 4 unityForest-0.2.0/unityForest/R/reprTrees.R | 363 + unityForest-0.2.0/unityForest/R/stock.R |only unityForest-0.2.0/unityForest/R/unityForest-package.R | 7 unityForest-0.2.0/unityForest/R/unityfor.R | 126 unityForest-0.2.0/unityForest/R/utility.R | 2 unityForest-0.2.0/unityForest/data/stock.rda |only unityForest-0.2.0/unityForest/man/predict.unityfor.Rd | 23 unityForest-0.2.0/unityForest/man/reprTrees.Rd | 108 unityForest-0.2.0/unityForest/man/stock.Rd |only unityForest-0.2.0/unityForest/man/unityForest-package.Rd | 5 unityForest-0.2.0/unityForest/man/unityfor.Rd | 76 unityForest-0.2.0/unityForest/src/Data.cpp | 433 - unityForest-0.2.0/unityForest/src/Data.h | 375 - unityForest-0.2.0/unityForest/src/DataChar.cpp | 49 unityForest-0.2.0/unityForest/src/DataChar.h | 86 unityForest-0.2.0/unityForest/src/DataDouble.h | 88 unityForest-0.2.0/unityForest/src/DataFloat.cpp | 33 unityForest-0.2.0/unityForest/src/DataFloat.h | 77 unityForest-0.2.0/unityForest/src/DataRcpp.h | 97 unityForest-0.2.0/unityForest/src/DataSparse.cpp | 37 unityForest-0.2.0/unityForest/src/DataSparse.h | 85 unityForest-0.2.0/unityForest/src/Forest.cpp | 2553 ++++----- unityForest-0.2.0/unityForest/src/Forest.h | 575 -- unityForest-0.2.0/unityForest/src/ForestClassification.cpp | 512 - unityForest-0.2.0/unityForest/src/ForestClassification.h | 155 unityForest-0.2.0/unityForest/src/ForestProbability.cpp | 567 -- unityForest-0.2.0/unityForest/src/ForestProbability.h | 172 unityForest-0.2.0/unityForest/src/ForestRegression.cpp | 306 - unityForest-0.2.0/unityForest/src/ForestRegression.h | 65 unityForest-0.2.0/unityForest/src/RcppExports.cpp | 15 unityForest-0.2.0/unityForest/src/Tree.cpp | 2341 +------- unityForest-0.2.0/unityForest/src/Tree.h | 667 +- unityForest-0.2.0/unityForest/src/TreeClassification.cpp | 3437 ++----------- unityForest-0.2.0/unityForest/src/TreeClassification.h | 303 - unityForest-0.2.0/unityForest/src/TreeProbability.cpp | 3284 ++---------- unityForest-0.2.0/unityForest/src/TreeProbability.h | 323 - unityForest-0.2.0/unityForest/src/TreeRegression.cpp | 1766 +++--- unityForest-0.2.0/unityForest/src/TreeRegression.h | 201 unityForest-0.2.0/unityForest/src/divforCpp.cpp | 256 unityForest-0.2.0/unityForest/src/globals.h | 161 unityForest-0.2.0/unityForest/src/utility.cpp | 1153 ++-- unityForest-0.2.0/unityForest/src/utility.h | 1004 +-- unityForest-0.2.0/unityForest/src/utilityRcpp.cpp | 23 52 files changed, 8238 insertions(+), 13853 deletions(-)
Title: Volume Approximation and Sampling of Convex Polytopes
Description: Provides an R interface for 'volesti' C++ package. 'volesti' computes estimations of volume
of polytopes given by (i) a set of points, (ii) linear inequalities or (iii) Minkowski sum of segments
(a.k.a. zonotopes). There are three algorithms for volume estimation as well as algorithms
for sampling, rounding and rotating polytopes. Moreover, 'volesti' provides algorithms for
estimating copulas useful in computational finance. Methods implemented in 'volesti' are described
in A. Chalkis and V. Fisikopoulos (2022) <doi:10.32614/RJ-2021-077> and references therein.
Author: Vissarion Fisikopoulos [aut, cre, cph] ,
Apostolos Chalkis [aut, cph]
Maintainer: Vissarion Fisikopoulos <vissarion.fisikopoulos@gmail.com>
Diff between volesti versions 1.1.2-9 dated 2025-04-29 and 1.1.2-10 dated 2026-02-25
DESCRIPTION | 15 ++++++++------- MD5 | 8 ++++---- NEWS.md | 3 +++ src/RcppExports.cpp | 1 - src/include/cartesian_geom/point.h | 2 +- 5 files changed, 16 insertions(+), 13 deletions(-)
Title: Modular Cohort-Building Framework for Analytical Dashboards
Description: You can easily add advanced cohort-building component
to your analytical dashboard or simple 'Shiny' app.
Then you can instantly start building cohorts using multiple
filters of different types, filtering datasets, and filtering steps.
Filters can be complex and data-specific, and together
with multiple filtering steps you can use complex filtering rules.
The cohort-building sidebar panel allows you to easily
work with filters, add and remove filtering steps.
It helps you with handling missing values during filtering,
and provides instant filtering feedback with filter feedback plots.
The GUI panel is not only compatible with native shiny
bookmarking, but also provides reproducible R code.
Author: Krystian Igras [cre, aut],
Kamil Wais [aut],
Adam Forys [ctb]
Maintainer: Krystian Igras <krystian8207@gmail.com>
Diff between shinyCohortBuilder versions 0.3.1 dated 2024-10-14 and 0.4.0 dated 2026-02-25
DESCRIPTION | 24 +- MD5 | 72 ++++---- NAMESPACE | 4 NEWS.md | 8 R/actions.R | 217 ++++++++++++++++++++++++-- R/app.R | 13 - R/cb_layer.R | 18 ++ R/filter_datetime_range.R |only R/filter_discrete.R | 6 R/filter_discrete_text.R | 2 R/filter_multi_discrete.R | 2 R/filter_query.R | 2 R/filter_range.R | 37 +++- R/renders.R | 138 ++++++++++++---- R/source.R | 19 ++ R/source_tblist.R | 25 ++- R/ui_utils.R | 14 + build/vignette.rds |binary inst/doc/custom-gui-layer.R | 316 +++++++++++++++++++------------------- inst/doc/custom-gui-layer.html | 281 +++++++++++++++++---------------- inst/doc/gui-filter-layer.R | 262 +++++++++++++++---------------- inst/doc/gui-filter-layer.html | 323 +++++++++++++++++++-------------------- inst/doc/shinyCohortBuilder.R | 112 ++++++------- inst/doc/shinyCohortBuilder.html | 237 ++++++++++++++-------------- inst/doc/updating-source.R | 162 +++++++++---------- inst/doc/updating-source.html | 163 +++++++++---------- inst/www/scb.css | 24 ++ inst/www/scb.js | 58 ++++++- inst/www/scb.min.css | 2 inst/www/scb.min.js | 2 man/cb_changed.Rd | 4 man/cb_ui.Rd | 63 +++++++ man/demo_app.Rd | 3 man/filter-position.Rd |only man/gui-filter-layer.Rd | 7 man/gui.Rd | 5 man/scb_icons.Rd | 2 man/scb_labels.Rd | 2 38 files changed, 1564 insertions(+), 1065 deletions(-)
More information about shinyCohortBuilder at CRAN
Permanent link
Title: Stochastic Approximation Expectation Maximization (SAEM)
Algorithm
Description: The 'saemix' package implements the Stochastic Approximation EM algorithm for parameter estimation in (non)linear mixed effects models. It (i) computes the maximum likelihood estimator of the population parameters, without any approximation of the model (linearisation, quadrature approximation,...), using the Stochastic Approximation Expectation Maximization (SAEM) algorithm, (ii) provides standard errors for the maximum likelihood estimator (iii) estimates the conditional modes, the conditional means and the conditional standard deviations of the individual parameters, using the Hastings-Metropolis algorithm (see Comets et al. (2017) <doi:10.18637/jss.v080.i03>). Many applications of SAEM in agronomy, animal breeding and PKPD analysis have been published by members of the Monolix group. The full PDF documentation for the package including references about the algorithm and examples can be downloaded on the github of the IAME research institute for 'saemix': <https://github.co [...truncated...]
Author: Emmanuelle Comets [aut, cre],
Audrey Lavenu [aut],
Marc Lavielle [aut],
Belhal Karimi [aut],
Maud Delattre [ctb],
Alexandra Lavalley-Morelle [ctb],
Marilou Chanel [ctb],
Johannes Ranke [ctb] ,
Sofia Kaisaridi [ctb],
Lucie Fayette [ctb]
Maintainer: Emmanuelle Comets <emmanuelle.comets@inserm.fr>
Diff between saemix versions 3.4 dated 2025-07-31 and 3.5 dated 2026-02-25
DESCRIPTION | 6 +++--- MD5 | 16 ++++++++-------- R/SaemixData-methods.R | 4 ++-- R/SaemixObject.R | 5 ++++- R/func_aux.R | 2 ++ R/func_bootstrap.R | 2 ++ R/func_discreteVPC.R | 10 +++++----- R/func_exploreData.R | 36 ++++++++++++++++++------------------ R/zzz.R | 2 +- 9 files changed, 45 insertions(+), 38 deletions(-)
Title: Event Classification, Visualization and Analysis of Eye Tracking
Data
Description: Functions for analysing eye tracking data, including event detection, visualizations and area of interest (AOI) based analyses.
The package includes implementations of the IV-T, I-DT, adaptive velocity threshold, and Identification by two means clustering (I2MC) algorithms.
See separate documentation for each function. The principles underlying I-VT and I-DT algorithms are described in Salvucci & Goldberg (2000) <doi:10.1145/355017.355028>.
Two-means clustering is described in Hessels et al. (2017), <doi: 10.3758/s13428-016-0822-1>.
The adaptive velocity threshold algorithm is described in Nyström & Holmqvist (2010),<doi:10.3758/BRM.42.1.188>.
A documentation of the 'kollaR' can be found in Kleberg et al (2026) <doi:10.3758/s13428-025-02903-z>. Cite this paper when using 'kollaR'
See a demonstration in the URL.
Author: Johan Lundin Kleberg [aut, cre]
Maintainer: Johan Lundin Kleberg <johan.lundin.kleberg@su.se>
Diff between kollaR versions 1.1.2 dated 2025-09-19 and 1.1.3 dated 2026-02-25
kollaR-1.1.2/kollaR/build |only kollaR-1.1.3/kollaR/DESCRIPTION | 13 +- kollaR-1.1.3/kollaR/MD5 | 12 +- kollaR-1.1.3/kollaR/R/VisualizationFunctions.R | 133 ++++++++++++++++++++++++- kollaR-1.1.3/kollaR/inst/CITATION | 24 +++- kollaR-1.1.3/kollaR/man/kollaR-package.Rd | 6 - kollaR-1.1.3/kollaR/man/static_plot.Rd | 7 - kollaR-1.1.3/kollaR/man/static_plot_minimal.Rd |only 8 files changed, 165 insertions(+), 30 deletions(-)
Title: UK Epidemiological Data Management
Description: Contains utilities and functions for the cleaning, processing and
management of patient level public health data for surveillance
and analysis held by the UK Health Security Agency, UKHSA.
Author: Alice Graham [aut] ,
Harshana Liyanage [aut] ,
Frederick Sloots [aut, cre] ,
Emma Parker [aut] ,
Alex Bhattacharya [aut]
Maintainer: Frederick Sloots <frederick.sloots@ukhsa.gov.uk>
Diff between epidm versions 1.0.4 dated 2022-07-11 and 1.0.6 dated 2026-02-25
DESCRIPTION | 42 - MD5 | 97 +- NAMESPACE | 5 NEWS.md | 63 + R/continuous_inpatient_spells.R | 112 ++- R/csv_from_zip.R | 42 + R/data.R | 79 ++ R/globals.R | 63 + R/group_time.R | 199 ++++- R/hospital_in_out_dates.R |only R/inpatient_codes.R | 189 ----- R/lab_data.R |only R/link_ae_inpatient.R | 682 +++++++++++++++++-- R/lookup_recode.R | 157 +++- R/patient_id.R | 882 +++++++++++++++++-------- R/proxy_episode_dates.R | 109 ++- R/respeciate_generic.R | 79 +- R/sql_clean.R | 13 R/sql_connect.R | 41 - R/sql_readwrite.R | 92 +- R/sysdata.rda |only R/valid_nhs.R | 48 - README.md | 22 build |only data/group_ecds_discharge_destination.rda |only data/group_inpatient_admission_method.rda |only data/group_inpatient_discharge_destination.rda |only data/lab_data.rda |only inst/doc |only man/cip_spells.Rd | 55 - man/csv_from_zip.Rd | 2 man/figures/logo.png |only man/group_ecds_discharge_destination.Rd |only man/group_inpatient_admission_method.Rd |only man/group_inpatient_discharge_destination.Rd |only man/group_time.Rd | 108 ++- man/hospital_in_out_dates.Rd |only man/inpatient_codes.Rd | 182 ----- man/lab_data.Rd |only man/link_ae_inpatient.Rd | 358 +++++++++- man/lookup_recode.Rd | 62 + man/proxy_episode_dates.Rd | 42 - man/respeciate_generic.Rd | 14 man/sql_clean.Rd | 1 man/sql_read.Rd | 2 man/sql_write.Rd | 2 man/uk_patient_id.Rd | 226 ++++-- man/valid_nhs.Rd | 38 - tests |only vignettes |only 50 files changed, 3024 insertions(+), 1084 deletions(-)
More information about hydrodownloadR at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-04-06 0.8.2
2023-08-24 0.8.1
Title: Word and Document Vector Models
Description: Create dense vector representation of words and documents using 'quanteda'. Implements Word2vec (Mikolov et al., 2013) <doi:10.48550/arXiv.1310.4546>, Doc2vec (Le & Mikolov, 2014) <doi:10.48550/arXiv.1405.4053> and Latent Semantic Analysis (Deerwester et al., 1990) <doi:10.1002/(SICI)1097-4571(199009)41:6%3C391::AID-ASI1%3E3.0.CO;2-9>.
Author: Kohei Watanabe [aut, cre, cph] ,
Jan Wijffels [aut] ,
BNOSAC [cph] ,
Max Fomichev [ctb, cph]
Maintainer: Kohei Watanabe <watanabe.kohei@gmail.com>
Diff between wordvector versions 0.6.0 dated 2025-12-09 and 0.6.1 dated 2026-02-25
DESCRIPTION | 8 ++++---- MD5 | 20 ++++++++++---------- NEWS.md | 13 ++++++++++--- R/doc2vec.R | 12 ++++++++++-- R/utils.R | 20 ++++++++++++-------- R/word2vec.R | 4 +++- man/as.matrix.Rd | 11 ++++++++++- man/probability.Rd | 7 +++++-- man/similarity.Rd | 2 +- tests/testthat/test-doc2vec.R | 12 ++++++++++++ tests/testthat/test-utils.R | 14 ++++++++++++-- 11 files changed, 89 insertions(+), 34 deletions(-)
Title: Conventional Tukey Test
Description: Provides tools to perform multiple comparison analyses, based on the well-known Tukey's "Honestly Significant Difference" (HSD) test. In models involving interactions, 'TukeyC' stands out from other R packages by implementing intuitive and easy-to-use functions. In addition to accommodating traditional R methods such as lm() and aov(), it has also been extended to objects of the lmer() class, that is, mixed models with fixed effects. For more details see Tukey (1949) <doi:10.2307/3001913>.
Author: Jose C. Faria [aut],
Enio G. Jelihovschi [aut],
Ivan B. Allaman [aut, cre]
Maintainer: Ivan B. Allaman <ivanalaman@gmail.com>
Diff between TukeyC versions 1.3-43 dated 2025-04-10 and 1.3-44 dated 2026-02-25
ChangeLog | 6 ++++++ DESCRIPTION | 22 +++++++++++----------- MD5 | 42 +++++++++++++++++++++--------------------- NAMESPACE | 2 +- R/TukeyC.lm.R | 19 +++++++++++++------ R/TukeyC.lmerMod.R | 18 ++++++++++++------ R/TukeyC.nest.lm.R | 18 ++++++++++++------ R/TukeyC.nest.lmerMod.R | 12 +++++++----- R/m.infos.lm.R | 17 ++++++++++------- R/m.infos.lmerMod.R | 14 +++++++------- R/m.infos.nest.lm.R | 14 +++++++------- R/m.infos.nest.lmerMod.R | 14 +++++++------- man/TukeyC-package.Rd | 6 +++--- man/TukeyC.Rd | 6 +++--- man/boxplot.TukeyC.Rd | 6 +++--- man/cv.Rd | 6 +++--- man/make.TukeyC.groups.Rd | 7 ++++--- man/make.TukeyC.test.Rd | 6 +++--- man/plot.TukeyC.Rd | 6 +++--- man/print.TukeyC.Rd | 6 +++--- man/summary.Rd | 6 +++--- man/xtable.TukeyC.Rd | 4 ++-- 22 files changed, 144 insertions(+), 113 deletions(-)
Title: Propagation of Uncertainty
Description: Propagation of uncertainty using higher-order Taylor expansion and Monte Carlo simulation. Calculations of propagated uncertainties are based on matrix calculus including covariance structure according to Arras 1998 <doi:10.3929/ethz-a-010113668> (first order), Wang & Iyer 2005 <doi:10.1088/0026-1394/42/5/011> (second order) and BIPM Supplement 1 (Monte Carlo) <doi:10.59161/JCGM101-2008>.
Author: Andrej-Nikolai Spiess [aut, cre]
Maintainer: Andrej-Nikolai Spiess <draspiess@gmail.com>
Diff between propagate versions 1.0-7 dated 2025-05-27 and 1.1-0 dated 2026-02-25
DESCRIPTION | 12 - MD5 | 54 +++---- NAMESPACE | 14 - NEWS | 39 +++++ R/WelchSatter.R | 11 - R/bigcor.R | 75 ++++++---- R/distr-densities.R | 21 ++ R/distr-samplers.R | 17 ++ R/fitDistr.R | 25 ++- R/plot.propagate.R | 13 - R/predictNLS.R | 27 ++- R/propagate.R | 276 ++++++++++++++++++++++++-------------- R/sobol.R |only R/summary.propagate.R | 112 +++++++++------ R/utils.R | 100 ++++++++++++- man/WelchSatter.Rd | 5 man/bigcor.Rd | 49 ++---- man/datasets.rd | 4 man/fitDistr.Rd | 68 +-------- man/makeDat.Rd | 2 man/mixCov.Rd | 3 man/plot.propagate.Rd | 5 man/predictNLS.Rd | 71 --------- man/propagate.Rd | 339 +++++++++++++++++++++++------------------------ man/rDistr.Rd | 21 +- man/sobol.Rd |only man/summary.propagate.Rd | 44 ++++-- src/Makevars | 2 src/Makevars.win | 2 29 files changed, 801 insertions(+), 610 deletions(-)
Title: Bayesian Mixture Models for Marker Dosage in Autopolyploids
Description: Fits Bayesian mixture models to estimate marker dosage for dominant markers in autopolyploids using JAGS (1.0 or greater) as outlined in Baker et al "Bayesian estimation of marker dosage in sugarcane and other autopolyploids" (2010, <doi:10.1007/s00122-010-1283-z>). May be used in conjunction with polySegratio for simulation studies and comparison with standard methods.
Author: Peter Baker [aut, cre]
Maintainer: Peter Baker <drpetebaker@gmail.com>
Diff between polySegratioMM versions 0.6-4 dated 2018-03-23 and 0.6-5 dated 2026-02-25
polySegratioMM-0.6-4/polySegratioMM/CHANGELOG |only polySegratioMM-0.6-4/polySegratioMM/inst/doc/polySegratioMM-overview.Rnw |only polySegratioMM-0.6-4/polySegratioMM/inst/doc/polySegratioMM-overview.pdf |only polySegratioMM-0.6-4/polySegratioMM/vignettes/polySegratioMM-overview.Rnw |only polySegratioMM-0.6-5/polySegratioMM/DESCRIPTION | 25 + polySegratioMM-0.6-5/polySegratioMM/MD5 | 113 +++---- polySegratioMM-0.6-5/polySegratioMM/NEWS.md |only polySegratioMM-0.6-5/polySegratioMM/R/calculateDIC.R | 20 - polySegratioMM-0.6-5/polySegratioMM/R/diagnosticsJagsMix.R | 16 - polySegratioMM-0.6-5/polySegratioMM/R/dosagesJagsMix.R | 14 polySegratioMM-0.6-5/polySegratioMM/R/dumpData.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/plot.runJagsWrapper.R | 4 polySegratioMM-0.6-5/polySegratioMM/R/plot.segratioMCMC.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/plotFitted.R | 9 polySegratioMM-0.6-5/polySegratioMM/R/plotTheoretical.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/print.dosagesMCMC.R | 3 polySegratioMM-0.6-5/polySegratioMM/R/print.runJags.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/print.runJagsWrapper.R | 4 polySegratioMM-0.6-5/polySegratioMM/R/print.segratioMCMC.R | 8 polySegratioMM-0.6-5/polySegratioMM/R/readJags.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/runJags.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/runSegratioMM.R | 157 ++++------ polySegratioMM-0.6-5/polySegratioMM/R/setControl.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/setInits.R | 7 polySegratioMM-0.6-5/polySegratioMM/R/summary.segratioMCMC.R | 5 polySegratioMM-0.6-5/polySegratioMM/R/writeControlFile.R | 6 polySegratioMM-0.6-5/polySegratioMM/R/writeJagsFile.R | 7 polySegratioMM-0.6-5/polySegratioMM/README.md | 2 polySegratioMM-0.6-5/polySegratioMM/build/vignette.rds |binary polySegratioMM-0.6-5/polySegratioMM/inst/CITATION | 16 - polySegratioMM-0.6-5/polySegratioMM/inst/doc/polySegratioMM-overview.R | 156 +++------ polySegratioMM-0.6-5/polySegratioMM/inst/doc/polySegratioMM-overview.Rmd |only polySegratioMM-0.6-5/polySegratioMM/inst/doc/polySegratioMM-overview.html |only polySegratioMM-0.6-5/polySegratioMM/man/DistributionPlotBinomial.Rd | 2 polySegratioMM-0.6-5/polySegratioMM/man/calculateDIC.Rd | 19 - polySegratioMM-0.6-5/polySegratioMM/man/diagnosticsJagsMix.Rd | 2 polySegratioMM-0.6-5/polySegratioMM/man/dosagesJagsMix.Rd | 6 polySegratioMM-0.6-5/polySegratioMM/man/dumpData.Rd | 5 polySegratioMM-0.6-5/polySegratioMM/man/plot.segratioMCMC.Rd | 4 polySegratioMM-0.6-5/polySegratioMM/man/plotFitted.Rd | 2 polySegratioMM-0.6-5/polySegratioMM/man/polySegratioMM-package.Rd | 23 - polySegratioMM-0.6-5/polySegratioMM/man/print.dosagesMCMC.Rd | 6 polySegratioMM-0.6-5/polySegratioMM/man/print.runJags.Rd | 6 polySegratioMM-0.6-5/polySegratioMM/man/readJags.Rd | 6 polySegratioMM-0.6-5/polySegratioMM/man/runJags.Rd | 7 polySegratioMM-0.6-5/polySegratioMM/man/runSegratioMM.Rd | 2 polySegratioMM-0.6-5/polySegratioMM/man/setControl.Rd | 2 polySegratioMM-0.6-5/polySegratioMM/man/setInits.Rd | 6 polySegratioMM-0.6-5/polySegratioMM/man/setModel.Rd | 2 polySegratioMM-0.6-5/polySegratioMM/man/setPriors.Rd | 2 polySegratioMM-0.6-5/polySegratioMM/man/summary.segratioMCMC.Rd | 4 polySegratioMM-0.6-5/polySegratioMM/man/writeControlFile.Rd | 6 polySegratioMM-0.6-5/polySegratioMM/man/writeJagsFile.Rd | 5 polySegratioMM-0.6-5/polySegratioMM/vignettes/auto/polySegratioMM-overview.el | 74 ++-- polySegratioMM-0.6-5/polySegratioMM/vignettes/man |only polySegratioMM-0.6-5/polySegratioMM/vignettes/polySegratioMM-overview.Rmd |only polySegratioMM-0.6-5/polySegratioMM/vignettes/tmp/tmp-006.pdf |binary polySegratioMM-0.6-5/polySegratioMM/vignettes/tmp/tmp-009.pdf |binary polySegratioMM-0.6-5/polySegratioMM/vignettes/tmp/tmp-016.pdf |binary polySegratioMM-0.6-5/polySegratioMM/vignettes/tmp/tmp-017.pdf |binary 60 files changed, 392 insertions(+), 406 deletions(-)
More information about polySegratioMM at CRAN
Permanent link
Title: Faster K-Medoids Clustering Algorithms: FastPAM, FastCLARA,
FastCLARANS
Description: R wrappers of C++ implementation of Faster K-Medoids clustering algorithms (FastPAM, FastCLARA and FastCLARANS) proposed in Erich Schubert, Peter J. Rousseeuw 2019 <doi:10.1007/978-3-030-32047-8_16>.
Author: Xun Li [aut, cre]
Maintainer: Xun Li <lixun910@gmail.com>
Diff between fastkmedoids versions 1.3 dated 2026-02-24 and 1.4 dated 2026-02-25
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- src/pam.h | 12 ++++++------ 3 files changed, 12 insertions(+), 12 deletions(-)
Title: Ethnobotanical Analysis, Decision-Framing, and TEK Modeling
Description: Tools for quantifying Traditional Ecological Knowledge (TEK), modeling TEK in decision frameworks, and designing structured decision-framing exercises in conservation and development contexts. The package implements quantitative ethnobotany indices (Use Value, Relative Frequency of Citation, etc.) but positions them within a larger framework of Bayesian modeling and participatory decision analysis. Includes critical assessment of indices' limitations and case studies of participatory workshops.
Author: Cory Whitney [aut, cre]
Maintainer: Cory Whitney <whitney.cory@gmail.com>
Diff between ethnobotanyR versions 0.1.9 dated 2022-12-17 and 0.2.0 dated 2026-02-25
ethnobotanyR-0.1.9/ethnobotanyR/vignettes/references/Ethnobotany.bib |only ethnobotanyR-0.2.0/ethnobotanyR/DESCRIPTION | 18 ethnobotanyR-0.2.0/ethnobotanyR/MD5 | 61 ethnobotanyR-0.2.0/ethnobotanyR/NEWS.md | 88 - ethnobotanyR-0.2.0/ethnobotanyR/R/ethno_bayes_consensus.R | 2 ethnobotanyR-0.2.0/ethnobotanyR/README.md | 69 ethnobotanyR-0.2.0/ethnobotanyR/build/partial.rdb |binary ethnobotanyR-0.2.0/ethnobotanyR/build/vignette.rds |binary ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/TEK_modeling_vignette.R |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/TEK_modeling_vignette.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/TEK_modeling_vignette.html |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/benin_case_study.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/benin_case_study.html |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/decision_framing_guide.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/decision_framing_guide.html |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyR_modeling_vignette.R | 21 ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyR_modeling_vignette.Rmd | 71 ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyR_modeling_vignette.html | 416 ++--- ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyr_decision_framing_practical.R |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyr_decision_framing_practical.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyr_decision_framing_practical.html |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyr_vignette.R | 137 + ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyr_vignette.Rmd | 263 ++- ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/ethnobotanyr_vignette.html | 832 ++++++---- ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/honest_ethnobotany.R |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/honest_ethnobotany.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/inst/doc/honest_ethnobotany.html |only ethnobotanyR-0.2.0/ethnobotanyR/man/ethno_bayes_consensus.Rd | 2 ethnobotanyR-0.2.0/ethnobotanyR/vignettes/TEK_modeling_vignette.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/benin_case_study.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/decision_framing_guide.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/ethnobotanyR_modeling_vignette.Rmd | 71 ethnobotanyR-0.2.0/ethnobotanyR/vignettes/ethnobotanyr_decision_framing_practical.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/ethnobotanyr_vignette.Rmd | 263 ++- ethnobotanyR-0.2.0/ethnobotanyR/vignettes/example_benin |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/honest_ethnobotany.Rmd |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/references/ethnobotanyR.bib |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/references/model_packages.bib |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/references/packages.bib |only ethnobotanyR-0.2.0/ethnobotanyR/vignettes/references/tax_packages.bib |only 40 files changed, 1673 insertions(+), 641 deletions(-)
Title: Accuracy Statistic Estimation for Imperfect Gold Standards
Description: Produce maximum likelihood estimates of common accuracy statistics
for multiple measurement methods when a gold standard is not available. An R
implementation of the expectation maximization algorithms described in Zhou et
al. (2011) <doi:10.1002/9780470906514> with additional functions for creating
simulated data and visualizing results. Supports binary, ordinal, and
continuous measurement methods.
Author: Corie Drake [aut, cre, cph]
Maintainer: Corie Drake <therealcfdrake@gmail.com>
Diff between emery versions 0.7.0 dated 2026-02-22 and 0.7.1 dated 2026-02-25
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 8 +++++++- R/binary_method_functions.R | 2 +- R/ordinal_method_functions.R | 12 ++++++------ build/partial.rdb |binary 6 files changed, 22 insertions(+), 16 deletions(-)
Title: Canonical Correlations and Tests of Independence
Description: A simple interface for multivariate correlation analysis that unifies various classical
statistical procedures including t-tests, tests in univariate and multivariate linear models,
parametric and nonparametric tests for correlation, Kruskal-Wallis tests, common approximate
versions of Wilcoxon rank-sum and signed rank tests, chi-squared tests of independence, score
tests of particular hypotheses in generalized linear models, canonical correlation analysis and
linear discriminant analysis.
Author: Robert Schlicht [aut, cre]
Maintainer: Robert Schlicht <robert.schlicht@tu-dresden.de>
Diff between cctest versions 2.3.0 dated 2026-02-20 and 2.3.1 dated 2026-02-25
DESCRIPTION | 8 +++---- LICENSE |only MD5 | 9 ++++---- NAMESPACE | 2 - R/cctest.R | 65 ++++++++++++++++++++++++---------------------------------- man/cctest.Rd | 37 ++++++++++++++------------------- 6 files changed, 54 insertions(+), 67 deletions(-)
Title: Cut Numeric Values into Evenly Distributed Groups
Description: Package binr (pronounced as "binner") provides algorithms for cutting numerical values exhibiting a potentially highly skewed distribution into evenly distributed groups (bins). This functionality can be applied for binning discrete values, such as counts, as well as for discretization of continuous values, for example, during generation of features used in machine learning algorithms.
Author: Sergei Izrailev [aut, cre]
Maintainer: Sergei Izrailev <sizrailev@jabiruventures.com>
Diff between binr versions 1.1.1 dated 2022-06-26 and 1.1.2 dated 2026-02-25
binr-1.1.1/binr/man/binr.Rd |only binr-1.1.2/binr/DESCRIPTION | 24 ++-- binr-1.1.2/binr/MD5 | 27 ++-- binr-1.1.2/binr/NEWS | 10 + binr-1.1.2/binr/R/binr-package.R | 41 ++----- binr-1.1.2/binr/R/bins.R | 167 +++++++++++++++-------------- binr-1.1.2/binr/R/greedy.R | 62 +++++----- binr-1.1.2/binr/R/optimize.R | 111 ++++++++++--------- binr-1.1.2/binr/R/quantiles.R | 32 ++--- binr-1.1.2/binr/inst/optimization_math.jpg |only binr-1.1.2/binr/man/binr-package.Rd |only binr-1.1.2/binr/man/bins.Rd | 86 +++++--------- binr-1.1.2/binr/man/bins.getvals.Rd |only binr-1.1.2/binr/man/bins.greedy.Rd | 20 +-- binr-1.1.2/binr/man/bins.merr.Rd |only binr-1.1.2/binr/man/bins.optimize.Rd | 43 +++---- binr-1.1.2/binr/man/bins.quantiles.Rd | 8 - 17 files changed, 320 insertions(+), 311 deletions(-)
More information about MultiDiscreteRNG at CRAN
Permanent link
Title: Spatial Regression Models with Compositional Data
Description: Spatial regression models with compositional responses using the alpha--transformation. Relevant papers include: Tsagris M. (2025), <doi:10.48550/arXiv.2510.12663>, Tsagris M. (2015), <https://soche.cl/chjs/volumes/06/02/Tsagris(2015).pdf>, Tsagris M.T., Preston S. and Wood A.T.A. (2011), <doi:10.48550/arXiv.1106.1451>.
Author: Michail Tsagris [aut, cre]
Maintainer: Michail Tsagris <mtsagris@uoc.gr>
Diff between CompositionalSR versions 1.0 dated 2025-10-23 and 1.1 dated 2026-02-25
DESCRIPTION | 12 +++--- MD5 | 66 ++++++++++++++++++++++------------ NAMESPACE | 8 ++-- R/alfa.reg.R | 37 ++++++++++++------- R/alfa.reg2.R | 78 ++++++++++++++++++++++++++--------------- R/alfa.reg3.R |only R/alfa.sar.R |only R/alfa.slx.R | 35 +++++++----------- R/alfa.slx2.R |only R/alfareg.nr.R |only R/ar.grads.R |only R/asar.grads.R |only R/aslx.grads.R |only R/cv.alfareg.R | 7 +-- R/cv.alfasar.R |only R/cv.alfaslx.R | 12 +++--- R/cv.gwar.R | 6 +-- R/gwar.R | 8 ++-- R/me.ar.R | 62 ++++++++++++++------------------ R/me.asar.R |only R/me.aslx.R | 4 -- R/rob.alfareg.R |only R/spat.folds.R | 4 +- man/CompositionalSR-package.Rd | 6 +-- man/alfa.reg.Rd | 37 ++++++++++++++----- man/alfa.sar.Rd |only man/alfa.slx.Rd | 38 +++++++++++++++---- man/alfareg.nr.Rd |only man/ar.grads.Rd |only man/asar.grads.Rd |only man/aslx.grads.Rd |only man/cv.alfareg.Rd | 12 +++--- man/cv.alfasar.Rd |only man/cv.alfaslx.Rd | 24 +++++++----- man/cv.gwar.Rd | 12 ++++-- man/gwar.Rd | 4 +- man/gwar.pred.Rd | 2 - man/me.alsx.Rd | 4 +- man/me.ar.Rd | 5 ++ man/me.asar.Rd |only man/me.gwar.Rd | 2 - man/rob.alfareg.Rd |only man/spat.folds.Rd | 9 +++- 43 files changed, 291 insertions(+), 203 deletions(-)
More information about CompositionalSR at CRAN
Permanent link
Title: Download Data from the Wittgenstein Centre Human Capital Data
Explorer
Description: Download and plot education specific demographic data from the Wittgenstein Centre for Demography and Human Capital Data Explorer <https://dataexplorer.wittgensteincentre.org/>.
Author: Guy J. Abel [aut, cre, ctb] ,
Samir K.C. [ctb] ,
Michaela Potancokova [ctb],
Claudia Reiter [ctb] ,
Andrea Tamburini [ctb],
Dilek Yildiz [ctb]
Maintainer: Guy J. Abel <g.j.abel@gmail.com>
Diff between wcde versions 0.0.7 dated 2024-02-13 and 0.0.8 dated 2026-02-25
wcde-0.0.7/wcde/inst/figures |only wcde-0.0.8/wcde/DESCRIPTION | 21 - wcde-0.0.8/wcde/MD5 | 83 ++-- wcde-0.0.8/wcde/NAMESPACE | 20 - wcde-0.0.8/wcde/NEWS.md | 5 wcde-0.0.8/wcde/R/edu_group_sum.R | 132 +++---- wcde-0.0.8/wcde/R/every_other.R | 48 +- wcde-0.0.8/wcde/R/find_indicator.R | 42 +- wcde-0.0.8/wcde/R/get_wcde.R | 4 wcde-0.0.8/wcde/R/get_wcde_single.R | 11 wcde-0.0.8/wcde/R/past_epop.R | 32 - wcde-0.0.8/wcde/R/utils-global.R | 2 wcde-0.0.8/wcde/R/utils-pipe.R | 22 - wcde-0.0.8/wcde/R/wcde_location.R | 62 +-- wcde-0.0.8/wcde/R/wic_col4.R | 12 wcde-0.0.8/wcde/R/wic_col6.R | 12 wcde-0.0.8/wcde/R/wic_col8.R | 12 wcde-0.0.8/wcde/R/wic_indicators.R | 42 +- wcde-0.0.8/wcde/R/wic_locations.R | 34 - wcde-0.0.8/wcde/R/wic_scenarios.R | 30 - wcde-0.0.8/wcde/R/zzz.R | 2 wcde-0.0.8/wcde/build/vignette.rds |binary wcde-0.0.8/wcde/data/past_epop.rda |binary wcde-0.0.8/wcde/data/wic_indicators.rda |binary wcde-0.0.8/wcde/data/wic_scenarios.rda |binary wcde-0.0.8/wcde/inst/doc/wcde.R | 116 +++--- wcde-0.0.8/wcde/inst/doc/wcde.Rmd | 16 wcde-0.0.8/wcde/inst/doc/wcde.html | 501 +++++++++++++--------------- wcde-0.0.8/wcde/man/edu_group_sum.Rd | 80 ++-- wcde-0.0.8/wcde/man/every_other.Rd | 56 +-- wcde-0.0.8/wcde/man/figures/world4_ssp2.gif |binary wcde-0.0.8/wcde/man/find_indicator.Rd | 44 +- wcde-0.0.8/wcde/man/get_wcde.Rd | 2 wcde-0.0.8/wcde/man/past_epop.Rd | 56 +-- wcde-0.0.8/wcde/man/pipe.Rd | 24 - wcde-0.0.8/wcde/man/wcde_location.Rd | 46 +- wcde-0.0.8/wcde/man/wic_col4.Rd | 32 - wcde-0.0.8/wcde/man/wic_col6.Rd | 32 - wcde-0.0.8/wcde/man/wic_col8.Rd | 32 - wcde-0.0.8/wcde/man/wic_indicators.Rd | 66 +-- wcde-0.0.8/wcde/man/wic_locations.Rd | 58 +-- wcde-0.0.8/wcde/man/wic_scenarios.Rd | 54 +-- wcde-0.0.8/wcde/vignettes/wcde.Rmd | 16 43 files changed, 930 insertions(+), 929 deletions(-)
Title: Explicit Key Assumptions for Flat-File Data
Description: Helps make implicit data assumptions explicit by attaching
keys to flat-file data that error when those assumptions are violated.
Designed for CSV-first workflows without database infrastructure or version
control. Provides key definition, assumption checks, join diagnostics,
and automatic drift detection via watched data frames that snapshot before
each transformation and report cell-level changes.
Author: Gilles Colling [aut, cre, cph]
Maintainer: Gilles Colling <gilles.colling051@gmail.com>
Diff between keyed versions 0.1.3 dated 2026-02-06 and 0.2.0 dated 2026-02-25
keyed-0.1.3/keyed/man/commit_keyed.Rd |only keyed-0.2.0/keyed/DESCRIPTION | 15 - keyed-0.2.0/keyed/MD5 | 49 ++- keyed-0.2.0/keyed/NAMESPACE | 8 keyed-0.2.0/keyed/NEWS.md | 43 +++ keyed-0.2.0/keyed/R/diff.R |only keyed-0.2.0/keyed/R/dplyr-methods.R | 105 +++++-- keyed-0.2.0/keyed/R/keyed-package.R | 2 keyed-0.2.0/keyed/R/snapshot.R | 275 +++++++++++++------- keyed-0.2.0/keyed/README.md | 216 ++++++++------- keyed-0.2.0/keyed/inst/WORDLIST |only keyed-0.2.0/keyed/inst/doc/philosophy.Rmd | 4 keyed-0.2.0/keyed/inst/doc/philosophy.html | 8 keyed-0.2.0/keyed/inst/doc/quickstart.R | 15 + keyed-0.2.0/keyed/inst/doc/quickstart.Rmd | 25 + keyed-0.2.0/keyed/inst/doc/quickstart.html | 104 ++++--- keyed-0.2.0/keyed/man/check_drift.Rd | 5 keyed-0.2.0/keyed/man/diff.keyed_df.Rd |only keyed-0.2.0/keyed/man/keyed-package.Rd | 2 keyed-0.2.0/keyed/man/list_snapshots.Rd | 2 keyed-0.2.0/keyed/man/stamp.Rd |only keyed-0.2.0/keyed/man/unwatch.Rd |only keyed-0.2.0/keyed/man/watch.Rd |only keyed-0.2.0/keyed/tests/testthat/test-diagnostics.R | 2 keyed-0.2.0/keyed/tests/testthat/test-diff.R |only keyed-0.2.0/keyed/tests/testthat/test-key.R | 2 keyed-0.2.0/keyed/tests/testthat/test-snapshot.R | 118 +++++++- keyed-0.2.0/keyed/tests/testthat/test-watch.R |only keyed-0.2.0/keyed/vignettes/philosophy.Rmd | 4 keyed-0.2.0/keyed/vignettes/quickstart.Rmd | 25 + 30 files changed, 704 insertions(+), 325 deletions(-)
Title: Determinantal Point Process Mixture Models
Description: Multivariate Gaussian mixture model with a determinant point
process prior to promote the discovery of parsimonious components from
observed data. See Xu, Mueller, Telesca (2016) <doi:10.1111/biom.12482>.
Author: Yanxun Xu [aut],
Peter Mueller [aut],
Donatello Telesca [aut],
David J. H. Shih [aut, cre]
Maintainer: David J. H. Shih <djh.shih@gmail.com>
Diff between dppmix versions 0.1.1 dated 2020-01-14 and 0.1.2 dated 2026-02-25
DESCRIPTION | 33 +++++++++++++---- MD5 | 6 +-- R/dppmix_mvnorm.R | 103 +++++++++++++++++++++++++++++++++++++++--------------- R/estimate.R | 9 +++- 4 files changed, 110 insertions(+), 41 deletions(-)
Title: Plot Function for Single-Case Data Frames
Description: Add-on for the 'scan' package that creates plots
from single-case data frames ('scdf'). It includes functions for styling
single-case plots, adding phase-based lines to indicate various statistical
parameters, and predefined themes for presentations and publications. More
information and in depth examples can be found in the online book
"Analyzing Single-Case Data with R and 'scan"
Jürgen Wilbert (2026) <https://jazznbass.github.io/scan-Book/>.
Author: Juergen Wilbert [aut, cre]
Maintainer: Juergen Wilbert <juergen.wilbert@uni-muenster.de>
Diff between scplot versions 0.6.0 dated 2025-06-29 and 0.6.1 dated 2026-02-25
scplot-0.6.0/scplot/R/element_point.R |only scplot-0.6.0/scplot/man/element_point.Rd |only scplot-0.6.0/scplot/man/scplot.scdf.Rd |only scplot-0.6.1/scplot/DESCRIPTION | 12 +- scplot-0.6.1/scplot/MD5 | 129 +++++++++++++------------- scplot-0.6.1/scplot/NAMESPACE | 3 scplot-0.6.1/scplot/NEWS.md | 9 + scplot-0.6.1/scplot/R/add_arrow.R | 13 ++ scplot-0.6.1/scplot/R/add_grid.R | 13 ++ scplot-0.6.1/scplot/R/add_labels.R | 16 ++- scplot-0.6.1/scplot/R/add_legend.R | 19 +++ scplot-0.6.1/scplot/R/add_line.R | 6 + scplot-0.6.1/scplot/R/add_marks.R | 21 +++- scplot-0.6.1/scplot/R/add_ridge.R | 7 + scplot-0.6.1/scplot/R/add_statline.R | 12 ++ scplot-0.6.1/scplot/R/add_text.R | 8 + scplot-0.6.1/scplot/R/as_ggplot.R | 6 + scplot-0.6.1/scplot/R/axis.R | 21 ++-- scplot-0.6.1/scplot/R/background_panel.R | 9 + scplot-0.6.1/scplot/R/import-export.R | 5 - scplot-0.6.1/scplot/R/inherit_scplot.R | 7 + scplot-0.6.1/scplot/R/new_theme.R | 16 ++- scplot-0.6.1/scplot/R/print.scplot.R | 5 - scplot-0.6.1/scplot/R/private-scplot.R | 74 +++++++------- scplot-0.6.1/scplot/R/scplot.R | 34 +++++- scplot-0.6.1/scplot/R/scplot.sc_hplm.R | 4 scplot-0.6.1/scplot/R/scplot.sc_rand.R | 4 scplot-0.6.1/scplot/R/scplot.sc_tauu.R | 2 scplot-0.6.1/scplot/R/set_base_text.R | 9 + scplot-0.6.1/scplot/R/set_casenames.R | 7 + scplot-0.6.1/scplot/R/set_dataline.R | 12 ++ scplot-0.6.1/scplot/R/set_phasenames.R | 10 +- scplot-0.6.1/scplot/R/set_separator.R | 11 +- scplot-0.6.1/scplot/R/theme.R | 40 ++++++-- scplot-0.6.1/scplot/R/title_caption.R | 9 + scplot-0.6.1/scplot/README.md | 23 ++++ scplot-0.6.1/scplot/inst/CITATION | 6 - scplot-0.6.1/scplot/man/add_arrow.Rd | 13 +- scplot-0.6.1/scplot/man/add_grid.Rd | 14 ++ scplot-0.6.1/scplot/man/add_labels.Rd | 7 + scplot-0.6.1/scplot/man/add_legend.Rd | 19 +++ scplot-0.6.1/scplot/man/add_line.Rd | 6 - scplot-0.6.1/scplot/man/add_marks.Rd | 25 ++++- scplot-0.6.1/scplot/man/add_ridge.Rd | 6 - scplot-0.6.1/scplot/man/add_statline.Rd | 12 +- scplot-0.6.1/scplot/man/add_text.Rd | 8 - scplot-0.6.1/scplot/man/add_title.Rd | 10 +- scplot-0.6.1/scplot/man/as_ggplot.Rd | 5 - scplot-0.6.1/scplot/man/dot-check_theme.Rd |only scplot-0.6.1/scplot/man/dot-inherit_scplot.Rd | 9 + scplot-0.6.1/scplot/man/dot-merge_element.Rd |only scplot-0.6.1/scplot/man/dot-merge_theme.Rd |only scplot-0.6.1/scplot/man/dot-size.Rd |only scplot-0.6.1/scplot/man/dot-upperfirst.Rd |only scplot-0.6.1/scplot/man/new_theme.Rd | 15 ++- scplot-0.6.1/scplot/man/print.scplot.Rd | 5 - scplot-0.6.1/scplot/man/reexports.Rd | 6 - scplot-0.6.1/scplot/man/scplot.Rd |only scplot-0.6.1/scplot/man/scplot.sc_hplm.Rd | 5 - scplot-0.6.1/scplot/man/scplot.sc_rand.Rd | 4 scplot-0.6.1/scplot/man/scplot.sc_tauu.Rd | 2 scplot-0.6.1/scplot/man/set_background.Rd | 9 + scplot-0.6.1/scplot/man/set_base_text.Rd | 10 +- scplot-0.6.1/scplot/man/set_casenames.Rd | 8 + scplot-0.6.1/scplot/man/set_dataline.Rd | 13 ++ scplot-0.6.1/scplot/man/set_phasenames.Rd | 11 +- scplot-0.6.1/scplot/man/set_separator.Rd | 13 +- scplot-0.6.1/scplot/man/set_theme.Rd | 8 + scplot-0.6.1/scplot/man/set_theme_element.Rd | 11 +- scplot-0.6.1/scplot/man/set_xaxis.Rd | 18 ++- 70 files changed, 597 insertions(+), 257 deletions(-)
Title: Access and Analyse 'VALD' Data via Our External 'APIs'
Description: Provides helper functions and wrappers to simplify authentication,
data retrieval, and result processing from the 'VALD' 'APIs'.
Designed to streamline integration for analysts and researchers working
with 'VALD's external 'APIs'.
For further documentation on integrating with 'VALD' 'APIs', see:
<https://support.vald.com/hc/en-au/articles/23415335574553-How-to-integrate-with-VALD-APIs>.
For a step-by-step guide to using this package, see:
<https://support.vald.com/hc/en-au/articles/48730811824281-A-guide-to-using-the-valdr-R-package>.
Author: Kieran Harrison [aut, cre],
VALD Support [ctb],
VALD [cph]
Maintainer: Kieran Harrison <k.harrison@vald.com>
Diff between valdr versions 2.1.0 dated 2025-12-12 and 2.2.0 dated 2026-02-25
DESCRIPTION | 8 - MD5 | 41 +++-- R/auth.R | 5 R/config.R | 10 + R/utils.R | 4 man/dot-build_test_attributes_long.Rd | 64 ++++----- man/dot-get_categories.Rd | 30 ++-- man/dot-get_groups.Rd | 30 ++-- man/dot-get_profile_group_ids.Rd | 38 ++--- man/dot-vald_default_endpoints.Rd | 24 +-- man/dot-vald_default_export_dir.Rd | 28 ++-- man/export_forcedecks_csv.Rd | 48 +++--- man/get_profiles_groups_categories.Rd | 66 ++++----- man/get_profiles_groups_categories_mapping.Rd | 70 +++++----- tests/testthat/helper-env.R | 6 tests/testthat/test-1-credentials_not_set.R | 28 ++-- tests/testthat/test-10-vald_default_endpoints.R |only tests/testthat/test-11-get_forcedecks.R |only tests/testthat/test-3-set_incorrect_credentials.R | 10 - tests/testthat/test-7a-start_date_persistence_write.R | 2 tests/testthat/test-7b-start_date_persistence_read.R | 2 tests/testthat/test-8-export-forcedecks_csv.R |only tests/testthat/test-9-get_profiles_groups_categories_mapping.R |only tests/testthat/testthat.R |only 24 files changed, 273 insertions(+), 241 deletions(-)
Title: Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source
or Commercial Software
Description: Easily carry out latent profile analysis ("LPA"), determine the
correct number of classes based on best practices, and tabulate and plot the
results. Provides functionality to estimate commonly-specified models with
free means, variances, and covariances for each profile. Follows a tidy
approach, in that output is in the form of a data frame that can
subsequently be computed on. Models can be estimated using the free open
source 'R' packages 'Mclust' and 'OpenMx', or using the commercial program
'MPlus', via the 'MplusAutomation' package.
Author: Joshua M Rosenberg [aut, cre],
Caspar van Lissa [aut],
Jennifer A Schmidt [ctb],
Patrick N Beymer [ctb],
Daniel Anderson [ctb],
Matthew J. Schell [ctb]
Maintainer: Joshua M Rosenberg <jmrosenberg@utk.edu>
Diff between tidyLPA versions 1.1.0 dated 2021-11-17 and 2.0.2 dated 2026-02-25
tidyLPA-1.1.0/tidyLPA/R/plot-corplot.R |only tidyLPA-1.1.0/tidyLPA/man/plot_bivariate.Rd |only tidyLPA-1.1.0/tidyLPA/man/plot_density.Rd |only tidyLPA-1.1.0/tidyLPA/man/plot_profiles.Rd |only tidyLPA-2.0.2/tidyLPA/DESCRIPTION | 30 tidyLPA-2.0.2/tidyLPA/MD5 | 74 tidyLPA-2.0.2/tidyLPA/NAMESPACE | 27 tidyLPA-2.0.2/tidyLPA/NEWS.md | 20 tidyLPA-2.0.2/tidyLPA/R/blrt_mclust_temporary.R |only tidyLPA-2.0.2/tidyLPA/R/calc_functions.R | 343 ++- tidyLPA-2.0.2/tidyLPA/R/estimate-profiles-mclust.R | 19 tidyLPA-2.0.2/tidyLPA/R/estimate-profiles-mplus.R | 2 tidyLPA-2.0.2/tidyLPA/R/estimate-profiles-openmx.R |only tidyLPA-2.0.2/tidyLPA/R/estimate-profiles.R | 85 tidyLPA-2.0.2/tidyLPA/R/missing_data.R | 16 tidyLPA-2.0.2/tidyLPA/R/openmx.R |only tidyLPA-2.0.2/tidyLPA/R/plot-bivariate.R |only tidyLPA-2.0.2/tidyLPA/R/plot-mixture_densities.R | 238 +- tidyLPA-2.0.2/tidyLPA/R/plot-profiles.R | 293 +- tidyLPA-2.0.2/tidyLPA/R/plot.tidyLPA.R | 20 tidyLPA-2.0.2/tidyLPA/R/predict.R |only tidyLPA-2.0.2/tidyLPA/R/tidylpa.r | 3 tidyLPA-2.0.2/tidyLPA/README.md | 37 tidyLPA-2.0.2/tidyLPA/build/partial.rdb |binary tidyLPA-2.0.2/tidyLPA/build/vignette.rds |binary tidyLPA-2.0.2/tidyLPA/inst/CITATION | 34 tidyLPA-2.0.2/tidyLPA/inst/doc/Introduction_to_tidyLPA.R | 63 tidyLPA-2.0.2/tidyLPA/inst/doc/Introduction_to_tidyLPA.Rmd | 7 tidyLPA-2.0.2/tidyLPA/inst/doc/Introduction_to_tidyLPA.html | 1102 +++++++--- tidyLPA-2.0.2/tidyLPA/inst/doc/benchmarking-mclust-and-mplus.R | 54 tidyLPA-2.0.2/tidyLPA/inst/doc/benchmarking-mclust-and-mplus.html | 388 ++- tidyLPA-2.0.2/tidyLPA/man/estimate_profiles.Rd | 51 tidyLPA-2.0.2/tidyLPA/man/estimate_profiles_openmx.Rd |only tidyLPA-2.0.2/tidyLPA/man/get_data.Rd | 6 tidyLPA-2.0.2/tidyLPA/man/get_estimates.Rd | 6 tidyLPA-2.0.2/tidyLPA/man/get_fit.Rd | 6 tidyLPA-2.0.2/tidyLPA/man/print.tidyLPA.Rd | 3 tidyLPA-2.0.2/tidyLPA/man/reexports.Rd |only tidyLPA-2.0.2/tidyLPA/man/single_imputation.Rd | 16 tidyLPA-2.0.2/tidyLPA/man/tidyLPA.Rd | 26 tidyLPA-2.0.2/tidyLPA/tests/testthat/Rplots.pdf |only tidyLPA-2.0.2/tidyLPA/tests/testthat/test-compare-fit-stats.R | 24 tidyLPA-2.0.2/tidyLPA/tests/testthat/test-local-estimate_profiles_mplus2-arguments.R | 11 tidyLPA-2.0.2/tidyLPA/vignettes/Introduction_to_tidyLPA.Rmd | 7 44 files changed, 2030 insertions(+), 981 deletions(-)
Title: Drawing Survival Curves using 'ggplot2'
Description: Contains the function 'ggsurvplot()' for drawing easily beautiful
and 'ready-to-publish' survival curves with the 'number at risk' table
and 'censoring count plot'. Other functions are also available to plot
adjusted curves for `Cox` model and to visually examine 'Cox' model assumptions.
Author: Alboukadel Kassambara [aut, cre],
Marcin Kosinski [aut],
Przemyslaw Biecek [aut],
Scheipl Fabian [ctb]
Maintainer: Alboukadel Kassambara <alboukadel.kassambara@gmail.com>
Diff between survminer versions 0.5.1 dated 2025-09-02 and 0.5.2 dated 2026-02-25
DESCRIPTION | 16 ++-- MD5 | 47 +++++++------- NAMESPACE | 2 NEWS.md | 18 +++++ R/add_ggsurvplot.R | 6 - R/ggadjustedcurves.R | 2 R/ggsurvplot.R | 9 +- R/ggsurvplot_core.R | 6 - R/ggsurvplot_df.R | 2 R/ggurvplot_arguments.R | 9 +- R/surv_cutpoint.R | 2 R/surv_fit.R | 4 - R/surv_pvalue.R | 35 ++-------- R/utilities.R | 9 +- R/weighted_logrank.R |only inst/doc/Informative_Survival_Plots.R | 20 ----- inst/doc/Informative_Survival_Plots.Rmd | 32 --------- inst/doc/Informative_Survival_Plots.html | 38 +---------- inst/doc/Specifiying_weights_in_log-rank_comparisons.Rmd | 6 - inst/doc/Specifiying_weights_in_log-rank_comparisons.html | 18 ++--- man/ggsurvplot.Rd | 9 +- man/ggsurvplot_arguments.Rd | 9 +- tests/testthat/test-ggsurvplot_basic.R |only tests/testthat/test-surv_pvalue.R |only vignettes/Informative_Survival_Plots.Rmd | 32 --------- vignettes/Specifiying_weights_in_log-rank_comparisons.Rmd | 6 - 26 files changed, 112 insertions(+), 225 deletions(-)
Title: Clustering Analysis Using Survival Tree and Forest Algorithms
Description: An outcome-guided algorithm is developed to identify clusters of samples with similar characteristics and survival rate. The algorithm first builds a random forest and then defines distances between samples based on the fitted random forest. Given the distances, we can apply hierarchical clustering algorithms to define clusters. Details about this method is described in <https://github.com/luyouepiusf/SurvivalClusteringTree>.
Author: Lu You [aut, cre] ,
Lauric Ferrat [aut] ,
Hemang Parikh [aut] ,
Yanan Huo [aut] ,
Yuting Yang [aut] ,
Jeffrey Krischer [ctb] ,
Maria Redondo [ctb] ,
Richard Oram [ctb] ,
Andrea Steck [ctb]
Maintainer: Lu You <lu.you@epi.usf.edu>
Diff between SurvivalClusteringTree versions 1.1.1 dated 2024-05-24 and 1.1.3 dated 2026-02-25
SurvivalClusteringTree-1.1.1/SurvivalClusteringTree/README.md |only SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/DESCRIPTION | 14 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/MD5 | 31 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/NAMESPACE | 1 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/R/RcppExports.R | 22 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/R/plot_survival_tree.R | 6 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/R/predict_distance_forest_matrix.R | 4 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/R/survival_forest_dataframe.R | 137 + SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/R/survival_forest_matrix.R | 135 + SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/R/survival_tree_matrix.R | 2 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/build/partial.rdb |binary SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/build/vignette.rds |binary SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/inst/doc/user-guide.html | 721 +++++----- SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/man/predict_distance_forest_matrix.Rd | 4 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/man/survival_forest.Rd | 9 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/man/survival_forest_matrix.Rd | 6 SurvivalClusteringTree-1.1.3/SurvivalClusteringTree/man/survival_tree_matrix.Rd | 9 17 files changed, 615 insertions(+), 486 deletions(-)
More information about SurvivalClusteringTree at CRAN
Permanent link
Title: Authentication Helpers for 'Snowflake'
Description: Authentication helpers for 'Snowflake'.
It provides compatibility with authentication approaches supported
by the 'Snowflake Connector for Python' <https://pypi.org/project/snowflake-connector-python>
and the 'Snowflake CLI' <https://pypi.org/project/snowflake-cli>.
Author: Aaron Jacobs [aut],
E. David Aja [aut, cre],
Posit Software, PBC [cph, fnd]
Maintainer: E. David Aja <david@posit.co>
Diff between snowflakeauth versions 0.2.1 dated 2026-01-15 and 0.2.2 dated 2026-02-25
DESCRIPTION | 8 +-- MD5 | 23 ++++++---- NEWS.md | 10 ++++ R/config.R | 26 ++++++++++++ R/credentials.R | 55 +++++++++++++++++++++---- R/externalbrowser.R | 62 ++++++++++++++++++++++++++++- R/keyring.R |only R/workload_identity.R |only README.md | 5 -- tests/testthat/_snaps/config.md | 17 +++++++ tests/testthat/_snaps/workload-identity.md |only tests/testthat/connections.toml | 26 ++++++++++++ tests/testthat/test-config.R | 32 ++++++++++++++ tests/testthat/test-keyring.R |only tests/testthat/test-workload-identity.R |only 15 files changed, 238 insertions(+), 26 deletions(-)
Title: Lightweight Graph Based Multiple Comparison Procedures
Description: A lightweight fork of 'gMCP' with functions for graphical
described multiple test procedures introduced in
Bretz et al. (2009) <doi:10.1002/sim.3495> and
Bretz et al. (2011) <doi:10.1002/bimj.201000239>.
Implements a flexible function using 'ggplot2' to create
multiplicity graph visualizations.
Contains instructions of multiplicity graph and graphical testing for
group sequential design, described in
Maurer and Bretz (2013) <doi:10.1080/19466315.2013.807748>,
with necessary unit testing using 'testthat'.
Author: Yalin Zhu [aut] ,
Yilong Zhang [aut],
Xuan Deng [aut],
Keaven Anderson [aut, cre],
Nan Xiao [aut] ,
Kornelius Rohmeyer [ctb] ,
Florian Klinglmueller [ctb] ,
gMCP project contributors [cph] ,
Merck & Co., Inc., Rahway, NJ, USA and its affiliates [cph]
Maintainer: Keaven Anderson <keaven_anderson@merck.com>
Diff between gMCPLite versions 0.1.6 dated 2025-08-26 and 0.1.7 dated 2026-02-25
DESCRIPTION | 19 ++--- MD5 | 21 +++-- NEWS.md | 8 ++ build/partial.rdb |binary build/vignette.rds |binary inst/doc/GraphicalMultiplicity.html | 129 +++++++++++++++++------------------- inst/doc/hGraph.html | 17 ++-- man/gMCPLite-package.Rd | 4 - tests/testthat/_snaps |only 9 files changed, 106 insertions(+), 92 deletions(-)
Title: Automatically Position Non-Overlapping Text Labels with
'ggplot2'
Description: Provides text and label geoms for 'ggplot2' that help to avoid
overlapping text labels. Labels repel away from each other and away from the
data points.
Author: Kamil Slowikowski [aut, cre] ,
Teun van den Brand [ctb] ,
Alicia Schep [ctb] ,
Sean Hughes [ctb] ,
Trung Kien Dang [ctb] ,
Saulius Lukauskas [ctb],
Jean-Olivier Irisson [ctb] ,
Zhian N Kamvar [ctb] ,
Thompson Ryan [ctb] ,
Dervieux Christophe [ctb] ,
[...truncated...]
Maintainer: Kamil Slowikowski <kslowikowski@gmail.com>
Diff between ggrepel versions 0.9.6 dated 2024-09-07 and 0.9.7 dated 2026-02-25
DESCRIPTION | 50 +-- MD5 | 35 +- NAMESPACE | 14 NEWS.md | 44 +++ R/RcppExports.R | 6 R/element-text-repel.R |only R/geom-label-repel.R | 104 +++++-- R/geom-marquee-repel.R |only R/geom-text-repel.R | 71 +++- R/ggrepel-package.R | 10 R/utilities.R | 6 build/vignette.rds |binary inst/doc/ggrepel.R | 8 inst/doc/ggrepel.html | 7 man/element_text_repel.Rd |only man/geom_text_repel.Rd | 35 ++ man/ggrepel.Rd | 6 src/repel_boxes.cpp | 59 +++- tests/testthat/setup.R |only tests/testthat/test-element-text-repel.R |only vignettes/examples.html | 450 +++++++++++++++++++++++++------ 21 files changed, 704 insertions(+), 201 deletions(-)
Title: Gamma Lasso Regression
Description: The gamma lasso algorithm provides regularization paths corresponding to a range of non-convex cost functions between L0 and L1 norms. As much as possible, usage for this package is analogous to that for the glmnet package (which does the same thing for penalization between L1 and L2 norms). For details see: Taddy (2017 JCGS), 'One-Step Estimator Paths for Concave Regularization', <doi:10.48550/arXiv.1308.5623>.
Author: Matt Taddy [aut, cre]
Maintainer: Matt Taddy <mataddy@gmail.com>
Diff between gamlr versions 1.13-8 dated 2023-04-16 and 1.13-9 dated 2026-02-25
DESCRIPTION | 17 +++++++++++------ MD5 | 4 ++-- man/naref.Rd | 4 ++-- 3 files changed, 15 insertions(+), 10 deletions(-)
Title: A 'DuckDB'-Backed Version of 'dplyr'
Description: A drop-in replacement for 'dplyr', powered by 'DuckDB' for
performance. Offers convenient utilities for working with in-memory and
larger-than-memory data while retaining full 'dplyr' compatibility.
Author: Hannes Muehleisen [aut] ,
Kirill Mueller [aut, cre] ,
Posit Software, PBC [cph, fnd]
Maintainer: Kirill Mueller <kirill@cynkra.com>
Diff between duckplyr versions 1.1.3 dated 2025-11-04 and 1.2.0 dated 2026-02-25
DESCRIPTION | 14 MD5 | 380 ++++---- NAMESPACE | 8 NEWS.md | 93 +- R/anti_join.R | 9 R/as_duckplyr_df.R | 16 R/as_duckplyr_tibble.R | 6 R/as_tbl.R | 3 R/can_load_extension.R | 6 R/compute_csv.R | 53 - R/compute_parquet.R | 58 + R/construct_constant.R | 37 R/construct_function.R | 50 - R/construct_reference.R | 37 R/construct_window.R | 47 - R/count.R | 11 R/dplyr-reimplement.R | 3 R/dplyr.R | 6 R/duckplyr-across.R | 33 R/duckplyr-package.R | 2 R/duckplyr_df.R | 42 R/ducktbl.R | 28 R/explain.R | 7 R/fallback.R | 86 + R/filter.R | 17 R/filter_out.R |only R/group_indices.R | 8 R/group_keys.R | 9 R/group_map.R | 13 R/group_modify.R | 7 R/group_split.R | 7 R/handle_desc.R | 5 R/head.R | 3 R/io-.R | 29 R/io-csv.R | 16 R/io-parquet.R | 19 R/join.R | 16 R/mutate.R | 35 R/oo.R | 45 R/print.R | 5 R/prudence.R | 27 R/read_csv_duckdb.R | 22 R/read_json_duckdb.R | 7 R/read_parquet_duckdb.R | 7 R/read_tbl_duckdb.R |only R/reframe.R | 2 R/relational-duckdb.R | 362 +++---- R/relational-expr.R | 40 R/relational-rel.R | 22 R/relational.R | 64 - R/rows_delete.R | 10 R/semi_join.R | 9 R/sql.R | 7 R/stats.R | 6 R/summarise.R | 6 R/telemetry.R | 29 R/tpch.R | 239 ++++- R/tpch2.R | 228 +++-- R/translate.R | 433 +++++++-- R/transmute-rd.R | 6 R/transmute.R | 48 + R/zzz.R | 5 build/vignette.rds |binary inst/doc/developers.html | 19 inst/doc/duckdb.html | 13 inst/doc/extend.html | 8 inst/doc/fallback.html | 8 inst/doc/large.html | 39 inst/doc/limits.R | 14 inst/doc/limits.Rmd | 24 inst/doc/limits.html | 75 + inst/doc/prudence.html | 36 man/arrange.duckplyr_df.Rd | 2 man/compute_csv.Rd | 23 man/compute_parquet.Rd | 21 man/count.duckplyr_df.Rd | 2 man/df_from_file.Rd | 10 man/filter.duckplyr_df.Rd | 32 man/mutate.duckplyr_df.Rd | 4 man/new_relexpr.Rd | 6 man/read_csv_duckdb.Rd | 8 man/read_tbl_duckdb.Rd |only man/slice_head.duckplyr_df.Rd | 4 man/summarise.duckplyr_df.Rd | 36 man/transmute.duckplyr_df.Rd | 2 tests/testthat/_snaps/dplyr-across.md | 488 ++++++++++ tests/testthat/_snaps/dplyr-arrange.md | 19 tests/testthat/_snaps/dplyr-case-match.md | 199 ++++ tests/testthat/_snaps/dplyr-case-when.md | 307 ++++++ tests/testthat/_snaps/dplyr-coalesce.md | 68 + tests/testthat/_snaps/dplyr-consecutive-id.md | 1 tests/testthat/_snaps/dplyr-count-tally.md | 90 + tests/testthat/_snaps/dplyr-desc.md | 1 tests/testthat/_snaps/dplyr-distinct.md | 8 tests/testthat/_snaps/dplyr-filter.md | 75 + tests/testthat/_snaps/dplyr-group-by.md |only tests/testthat/_snaps/dplyr-group-data.md |only tests/testthat/_snaps/dplyr-group-map.md |only tests/testthat/_snaps/dplyr-if-else.md | 22 tests/testthat/_snaps/dplyr-join-rows.md | 80 - tests/testthat/_snaps/dplyr-lead-lag.md | 2 tests/testthat/_snaps/dplyr-n-distinct.md | 1 tests/testthat/_snaps/dplyr-na-if.md | 2 tests/testthat/_snaps/dplyr-nth-value.md | 1 tests/testthat/_snaps/dplyr-pick.md | 48 - tests/testthat/_snaps/dplyr-sample.md | 6 tests/testthat/_snaps/dplyr-select-helpers.md |only tests/testthat/_snaps/dplyr-summarise.md | 21 tests/testthat/_snaps/duckplyr-across.md | 85 + tests/testthat/_snaps/expr.md | 9 tests/testthat/_snaps/fallback.md | 14 tests/testthat/_snaps/relational-duckdb.md | 10 tests/testthat/_snaps/translate.md | 285 ++++-- tests/testthat/helper-dplyr-encoding.R | 21 tests/testthat/helper-dplyr-s3.R | 3 tests/testthat/setup.R | 10 tests/testthat/test-as_duckplyr_df.R | 456 ++++++++++ tests/testthat/test-as_duckplyr_tibble.R | 10 tests/testthat/test-as_tbl.R | 5 tests/testthat/test-compute_csv.R | 28 tests/testthat/test-compute_parquet.R | 28 tests/testthat/test-demo.R | 29 tests/testthat/test-dplyr-across.R | 1185 ++++++++++++++++++++------ tests/testthat/test-dplyr-all-equal.R | 15 tests/testthat/test-dplyr-arrange.R | 144 ++- tests/testthat/test-dplyr-bind-cols.R | 27 tests/testthat/test-dplyr-bind-rows.R | 20 tests/testthat/test-dplyr-by.R | 4 tests/testthat/test-dplyr-case-match.R | 323 +++++++ tests/testthat/test-dplyr-case-when.R | 426 ++++++++- tests/testthat/test-dplyr-coalesce.R | 134 ++ tests/testthat/test-dplyr-colwise-funs.R | 4 tests/testthat/test-dplyr-conditions.R | 60 - tests/testthat/test-dplyr-consecutive-id.R | 4 tests/testthat/test-dplyr-context.R | 14 tests/testthat/test-dplyr-copy-to.R | 4 tests/testthat/test-dplyr-count-tally.R | 91 + tests/testthat/test-dplyr-desc.R | 4 tests/testthat/test-dplyr-distinct.R | 71 - tests/testthat/test-dplyr-filter.R | 506 +++++++---- tests/testthat/test-dplyr-funs.R | 10 tests/testthat/test-dplyr-generics.R | 22 tests/testthat/test-dplyr-group-by.R | 373 +++++--- tests/testthat/test-dplyr-group-data.R | 39 tests/testthat/test-dplyr-group-map.R | 95 +- tests/testthat/test-dplyr-group-nest.R | 27 tests/testthat/test-dplyr-group-split.R | 79 + tests/testthat/test-dplyr-group-trim.R | 16 tests/testthat/test-dplyr-grouped-df.R | 56 - tests/testthat/test-dplyr-groups-with.R | 6 tests/testthat/test-dplyr-if-else.R | 20 tests/testthat/test-dplyr-join-by.R | 44 tests/testthat/test-dplyr-join-cols.R | 99 +- tests/testthat/test-dplyr-join-cross.R | 9 tests/testthat/test-dplyr-join-rows.R | 99 -- tests/testthat/test-dplyr-join.R | 204 +++- tests/testthat/test-dplyr-lead-lag.R | 26 tests/testthat/test-dplyr-mutate.R | 344 ++++--- tests/testthat/test-dplyr-n-distinct.R | 4 tests/testthat/test-dplyr-na-if.R | 6 tests/testthat/test-dplyr-near.R | 4 tests/testthat/test-dplyr-nest-by.R | 11 tests/testthat/test-dplyr-nth-value.R | 9 tests/testthat/test-dplyr-order-by.R | 5 tests/testthat/test-dplyr-pick.R | 82 + tests/testthat/test-dplyr-pull.R | 4 tests/testthat/test-dplyr-rank.R | 9 tests/testthat/test-dplyr-reframe.R | 135 ++ tests/testthat/test-dplyr-relocate.R | 24 tests/testthat/test-dplyr-rename.R | 42 tests/testthat/test-dplyr-rows.R | 20 tests/testthat/test-dplyr-rowwise.R | 42 tests/testthat/test-dplyr-sample.R | 43 tests/testthat/test-dplyr-select-helpers.R | 19 tests/testthat/test-dplyr-select.R | 102 +- tests/testthat/test-dplyr-sets.R | 13 tests/testthat/test-dplyr-slice.R | 44 tests/testthat/test-dplyr-summarise.R | 459 +++++----- tests/testthat/test-dplyr-transmute.R | 33 tests/testthat/test-dplyr.R | 125 ++ tests/testthat/test-duckdb.R | 39 tests/testthat/test-duckplyr-across.R | 136 ++ tests/testthat/test-ducktbl.R | 18 tests/testthat/test-expr.R | 8 tests/testthat/test-fallback.R | 20 tests/testthat/test-n_distinct.R | 85 - tests/testthat/test-prom.R | 17 tests/testthat/test-prudence.R | 12 tests/testthat/test-read_csv_duckdb.R | 32 tests/testthat/test-read_tbl_duckdb.R |only tests/testthat/test-rel_api.R | 455 +++++++++ tests/testthat/test-relational-duckdb.R | 18 tests/testthat/test-relational.R | 6 tests/testthat/test-translate.R | 201 ++++ vignettes/limits.Rmd | 24 195 files changed, 9598 insertions(+), 2978 deletions(-)
Title: Relational Data Models
Description: Provides tools for working with multiple related
tables, stored as data frames or in a relational database. Multiple
tables (data and metadata) are stored in a compound object, which can
then be manipulated with a pipe-friendly syntax.
Author: Tobias Schieferdecker [aut],
Kirill Mueller [aut, cre] ,
Antoine Fabri [ctb],
Darko Bergant [aut],
Katharina Brunner [ctb],
James Wondrasek [ctb],
Indrajeet Patil [ctb] ,
Maelle Salmon [ctb] ,
energie360 AG [fnd],
cynkra GmbH [fnd, cph]
Maintainer: Kirill Mueller <kirill@cynkra.com>
Diff between dm versions 1.0.12 dated 2025-07-02 and 1.1.0 dated 2026-02-25
DESCRIPTION | 34 MD5 | 413 +++++----- NAMESPACE | 24 NEWS.md | 108 ++ R/add-tbl.R | 11 R/bind.R | 1 R/build_copy_queries.R | 60 + R/cache.R | 6 R/check-cardinalities.R | 87 +- R/code-generation.R | 5 R/datamodelr-code.R | 180 ++-- R/db-helpers.R | 106 +- R/db-interface.R | 262 +++--- R/deconstruct.R | 78 + R/deprecated.R | 8 R/descriptions.R | 1 R/disambiguate.R | 30 R/dm-flatten.R |only R/dm-package.R | 1 R/dm.R | 89 +- R/dm_deconstruct.R | 12 R/dm_from_con.R | 77 + R/dm_get_con.R | 5 R/dm_get_tables.R | 1 R/dm_nest_tbl.R | 79 + R/dm_sql.R | 86 +- R/dm_unnest_tbl.R | 8 R/dm_wrap.R | 11 R/dplyr-src.R | 44 - R/dplyr.R | 758 ++++++++++++++++-- R/draw-dm.R | 191 +++- R/enum_ops.R | 4 R/enumerate_all_paths.R | 17 R/error-helpers.R | 559 ++++++------- R/examine-cardinalities.R | 62 - R/examine-constraints.R | 115 ++ R/filter-dm.R | 66 + R/filter-helpers.R | 10 R/financial-db-con.R | 7 R/flatten.R | 83 +- R/foreign-keys.R | 215 +++-- R/format.R | 4 R/globals.R | 10 R/graph.R | 8 R/gui-check.R | 14 R/gui-dmSVG.R | 11 R/gui-gui_global.R | 25 R/gui-gui_server.R | 48 - R/gui-gui_ui.R | 128 ++- R/gui-mw_cg.R | 19 R/gui-mw_cg_make_dm_add_fk.R | 9 R/gui-mw_cg_make_dm_rename.R | 8 R/igraph-fallback.R |only R/igraph.R |only R/json_nest.R | 36 R/json_nest_join.R | 10 R/json_pack.R | 25 R/json_pack_join.R | 10 R/json_unnest.R | 13 R/json_unpack.R | 10 R/key-helpers.R | 70 + R/learn.R | 91 +- R/mariadb.R | 5 R/meta.R | 630 ++++++++++++--- R/mssql.R | 104 +- R/nest.R | 8 R/new_ticker.R | 3 R/nycflights13.R | 9 R/pack_join.R | 4 R/paste.R | 133 ++- R/pixarfilms.R | 61 + R/primary-keys.R | 108 +- R/rows-dm.R | 81 + R/schema.R | 43 - R/select-tbl.R | 5 R/select.R | 2 R/standalone-check_suggested.R | 4 R/table-surgery.R | 5 R/test-dm.R | 38 R/testthat-wrappers.R | 36 R/tidyr.R | 84 +- R/tidyselect.R | 18 R/unique-keys.R | 58 - R/unnest.R | 17 R/upgrade.R | 16 R/validate.R | 27 R/waldo.R | 19 R/zoom.R | 32 R/zoom2.R |only R/zzx-deprecated.R | 276 ++++-- R/zzz.R | 56 + build/vignette.rds |binary demo/basel.R | 24 demo/berlin.R | 8 demo/hamburg.R | 36 demo/milano.R | 25 demo/neuchatel.R | 32 demo/nyc.R | 107 +- demo/seattle.R | 108 +- demo/zurich.R | 14 demo/zurich2.R | 17 inst/doc/dm.R | 4 inst/doc/dm.Rmd | 6 inst/doc/dm.html | 16 inst/doc/howto-dm-copy.R | 8 inst/doc/howto-dm-copy.Rmd | 8 inst/doc/howto-dm-copy.html | 27 inst/doc/howto-dm-db.R | 4 inst/doc/howto-dm-db.Rmd | 8 inst/doc/howto-dm-db.html | 18 inst/doc/howto-dm-df.html | 4 inst/doc/howto-dm-rows.html | 4 inst/doc/howto-dm-theory.html | 4 inst/doc/tech-dm-cdm.html | 4 inst/doc/tech-dm-class.html | 4 inst/doc/tech-dm-draw.html | 4 inst/doc/tech-dm-filter.html | 4 inst/doc/tech-dm-join.html | 4 inst/doc/tech-dm-low-level.html | 4 inst/extdata/pixarfilms-v1.rds |only inst/make-cheatsheet.R | 14 man/copy_dm_to.Rd | 15 man/deprecated.Rd | 2 man/dm_deconstruct.Rd | 4 man/dm_draw.Rd | 74 + man/dm_examine_constraints.Rd | 5 man/dm_flatten.Rd |only man/dm_flatten_to_tbl.Rd | 4 man/dm_from_con.Rd | 7 man/dm_from_src.Rd | 7 man/dm_pixarfilms.Rd | 8 man/dplyr_join.Rd | 268 +++++- man/dplyr_table_manipulation.Rd | 173 +++- man/tidyr_table_manipulation.Rd | 73 + tests/testthat/_problems |only tests/testthat/_snaps/add-tbl.md | 2 tests/testthat/_snaps/bind.md | 2 tests/testthat/_snaps/check-cardinalities.md | 2 tests/testthat/_snaps/db-interface.md | 9 tests/testthat/_snaps/deconstruct.md | 24 tests/testthat/_snaps/disentangle.md | 2 tests/testthat/_snaps/dm-flatten.md |only tests/testthat/_snaps/dm.md | 18 tests/testthat/_snaps/dm_nest_tbl.md | 65 + tests/testthat/_snaps/dm_wrap.md | 8 tests/testthat/_snaps/dplyr.md | 55 + tests/testthat/_snaps/draw-dm.md | 45 + tests/testthat/_snaps/duckplyr.md |only tests/testthat/_snaps/error-helpers.md | 142 ++- tests/testthat/_snaps/error-ownership.md |only tests/testthat/_snaps/examine-constraints.md | 10 tests/testthat/_snaps/filter-dm.md | 20 tests/testthat/_snaps/graph.md | 15 tests/testthat/_snaps/igraph.md |only tests/testthat/_snaps/json_nest.md | 16 tests/testthat/_snaps/json_pack.md | 8 tests/testthat/_snaps/key-helpers.md | 16 tests/testthat/_snaps/learn.md | 150 ++- tests/testthat/_snaps/pack_join.md | 2 tests/testthat/_snaps/paste.md | 27 tests/testthat/_snaps/primary-keys.md | 9 tests/testthat/_snaps/rows-dm.md | 8 tests/testthat/_snaps/unique-keys.md | 4 tests/testthat/_snaps/upgrade.md | 2 tests/testthat/_snaps/zoom.md | 4 tests/testthat/_snaps/zoom2.md |only tests/testthat/_snaps/zzx-deprecated.md | 32 tests/testthat/helper-config-db.R | 27 tests/testthat/helper-expectations.R | 54 + tests/testthat/helper-src.R | 1097 ++++++++++++++------------- tests/testthat/test-add-tbl.R | 3 tests/testthat/test-bind.R | 6 tests/testthat/test-build_copy_queries.R | 5 tests/testthat/test-check-cardinalities.R | 296 ++++++- tests/testthat/test-code-generation.R | 32 tests/testthat/test-db-helpers.R | 112 ++ tests/testthat/test-db-interface.R | 9 tests/testthat/test-deconstruct.R | 47 + tests/testthat/test-descriptions.R | 3 tests/testthat/test-dm-flatten.R |only tests/testthat/test-dm.R | 33 tests/testthat/test-dm_nest_tbl.R | 42 - tests/testthat/test-dm_pixarfilms.R | 10 tests/testthat/test-dm_unnest_tbl.R | 10 tests/testthat/test-dm_wrap.R | 65 + tests/testthat/test-dplyr.R | 489 +++++++++++- tests/testthat/test-draw-dm.R | 70 + tests/testthat/test-duckplyr.R |only tests/testthat/test-error-helpers.R | 31 tests/testthat/test-error-ownership.R |only tests/testthat/test-examine-constraints.R | 9 tests/testthat/test-filter-dm.R | 3 tests/testthat/test-flatten.R | 52 - tests/testthat/test-foreign-keys.R | 29 tests/testthat/test-graph.R | 25 tests/testthat/test-igraph-fallback.R |only tests/testthat/test-igraph.R |only tests/testthat/test-json_nest.R | 14 tests/testthat/test-json_pack.R | 7 tests/testthat/test-key-helpers.R | 56 + tests/testthat/test-learn.R | 150 ++- tests/testthat/test-nest.R | 1 tests/testthat/test-paste.R | 43 - tests/testthat/test-rows-dm.R | 13 tests/testthat/test-schema.R | 7 tests/testthat/test-select.R | 6 tests/testthat/test-table-surgery.R | 3 tests/testthat/test-tidyr.R | 47 + tests/testthat/test-validate.R | 81 + tests/testthat/test-zoom.R | 4 tests/testthat/test-zoom2.R |only tests/testthat/test-zzx-deprecated.R | 7 tests/testthat/test_dm_from_con.R | 20 vignettes/articles/cheatsheet |only vignettes/dm.Rmd | 6 vignettes/howto-dm-copy.Rmd | 8 vignettes/howto-dm-db.Rmd | 8 217 files changed, 8063 insertions(+), 3179 deletions(-)
Title: Estimation in Difference-in-Difference Designs with Multiple
Groups and Periods
Description: Estimation of heterogeneity-robust difference-in-differences estimators, with a binary, discrete, or continuous treatment, in designs where past treatments may affect the current outcome.
Author: Anzony Quispe [aut, cre],
Diego Ciccia [aut],
Felix Knau [aut],
Melitine Malezieux [aut],
Doulo Sow [aut],
Clement de Chaisemartin [aut]
Maintainer: Anzony Quispe <anzony.quispe@gmail.com>
Diff between DIDmultiplegtDYN versions 2.3.0 dated 2026-02-03 and 2.3.1 dated 2026-02-25
DESCRIPTION | 6 MD5 | 19 +-- R/did_multiplegt_bootstrap.R | 45 ++++--- R/did_multiplegt_dyn.R | 112 ++++++++++++++++-- R/did_multiplegt_dyn_design.R | 4 R/did_multiplegt_dyn_dfs.R | 4 R/did_multiplegt_dyn_normweights.R | 4 R/did_multiplegt_main.R | 224 ++++++++++++++++++++++++++++--------- R/print.R | 29 ++++ inst/benchmarks |only man/did_multiplegt_dyn.Rd | 10 + 11 files changed, 358 insertions(+), 99 deletions(-)
More information about DIDmultiplegtDYN at CRAN
Permanent link
Title: R Database Interface
Description: A database interface definition for communication between R
and relational database management systems. All classes in this
package are virtual and need to be extended by the various R/DBMS
implementations.
Author: R Special Interest Group on Databases [aut],
Hadley Wickham [aut],
Kirill Mueller [aut, cre] ,
R Consortium [fnd]
Maintainer: Kirill Mueller <kirill@cynkra.com>
Diff between DBI versions 1.2.3 dated 2024-06-02 and 1.3.0 dated 2026-02-25
DBI-1.2.3/DBI/build/DBI.pdf |only DBI-1.3.0/DBI/DESCRIPTION | 23 DBI-1.3.0/DBI/MD5 | 416 - DBI-1.3.0/DBI/NEWS.md | 77 DBI-1.3.0/DBI/R/00-Id.R | 17 DBI-1.3.0/DBI/R/02-DBIDriver.R | 19 DBI-1.3.0/DBI/R/07-DBIResultArrow.R | 3 DBI-1.3.0/DBI/R/11-dbAppendTable.R | 16 DBI-1.3.0/DBI/R/12-dbCreateTable.R | 16 DBI-1.3.0/DBI/R/13-dbWriteTable.R | 12 DBI-1.3.0/DBI/R/14-dbSendQuery.R | 3 DBI-1.3.0/DBI/R/15-dbBind.R | 4 DBI-1.3.0/DBI/R/21-dbAppendTableArrow.R | 15 DBI-1.3.0/DBI/R/22-dbCreateTableArrow.R | 16 DBI-1.3.0/DBI/R/23-dbWriteTableArrow.R | 12 DBI-1.3.0/DBI/R/24-dbSendQueryArrow.R | 3 DBI-1.3.0/DBI/R/25-dbBindArrow.R | 6 DBI-1.3.0/DBI/R/DBI-package.R | 4 DBI-1.3.0/DBI/R/DBIConnector.R | 3 DBI-1.3.0/DBI/R/SQLKeywords.R | 3 DBI-1.3.0/DBI/R/SQLKeywords_DBIObject.R | 7 DBI-1.3.0/DBI/R/SQLKeywords_missing.R | 7 DBI-1.3.0/DBI/R/dbAppendTableArrow_DBIConnection.R | 11 DBI-1.3.0/DBI/R/dbAppendTable_DBIConnection.R | 14 DBI-1.3.0/DBI/R/dbBegin.R | 4 DBI-1.3.0/DBI/R/dbBindArrow_DBIResultArrowDefault.R | 6 DBI-1.3.0/DBI/R/dbCallProc.R | 10 DBI-1.3.0/DBI/R/dbCanConnect.R | 3 DBI-1.3.0/DBI/R/dbClearResult.R | 8 DBI-1.3.0/DBI/R/dbClearResult_DBIResultArrow.R | 6 DBI-1.3.0/DBI/R/dbColumnInfo.R | 3 DBI-1.3.0/DBI/R/dbCommit.R | 4 DBI-1.3.0/DBI/R/dbConnect.R | 14 DBI-1.3.0/DBI/R/dbCreateTableArrow_DBIConnection.R | 14 DBI-1.3.0/DBI/R/dbCreateTable_DBIConnection.R | 15 DBI-1.3.0/DBI/R/dbDataType.R | 7 DBI-1.3.0/DBI/R/dbDisconnect.R | 7 DBI-1.3.0/DBI/R/dbDriver.R | 3 DBI-1.3.0/DBI/R/dbExecute.R | 6 DBI-1.3.0/DBI/R/dbExecute_DBIConnection_character.R | 6 DBI-1.3.0/DBI/R/dbExistsTable.R | 3 DBI-1.3.0/DBI/R/dbExistsTable_DBIConnection_Id.R | 6 DBI-1.3.0/DBI/R/dbFetch.R | 7 DBI-1.3.0/DBI/R/dbFetchArrow.R | 10 DBI-1.3.0/DBI/R/dbFetchArrowChunk.R | 10 DBI-1.3.0/DBI/R/dbFetchArrowChunk_DBIResultArrow.R | 6 DBI-1.3.0/DBI/R/dbFetchArrow_DBIResultArrow.R | 6 DBI-1.3.0/DBI/R/dbFetch_DBIResultArrow.R | 1 DBI-1.3.0/DBI/R/dbGetConnectArgs.R | 3 DBI-1.3.0/DBI/R/dbGetConnectArgs_DBIConnector.R | 6 DBI-1.3.0/DBI/R/dbGetException.R | 6 DBI-1.3.0/DBI/R/dbGetInfo.R | 4 DBI-1.3.0/DBI/R/dbGetQuery.R | 11 DBI-1.3.0/DBI/R/dbGetQueryArrow.R | 11 DBI-1.3.0/DBI/R/dbGetQueryArrow_DBIConnection.R | 6 DBI-1.3.0/DBI/R/dbGetQuery_DBIConnection_character.R | 6 DBI-1.3.0/DBI/R/dbGetRowCount.R | 3 DBI-1.3.0/DBI/R/dbGetRowCount_DBIResultArrow.R | 6 DBI-1.3.0/DBI/R/dbGetRowsAffected.R | 3 DBI-1.3.0/DBI/R/dbGetRowsAffected_DBIResultArrow.R | 6 DBI-1.3.0/DBI/R/dbGetStatement.R | 3 DBI-1.3.0/DBI/R/dbGetStatement_DBIResultArrow.R | 6 DBI-1.3.0/DBI/R/dbHasCompleted.R | 3 DBI-1.3.0/DBI/R/dbHasCompleted_DBIResultArrow.R | 6 DBI-1.3.0/DBI/R/dbIsReadOnly.R | 6 DBI-1.3.0/DBI/R/dbIsValid.R | 3 DBI-1.3.0/DBI/R/dbIsValid_DBIResultArrowDefault.R | 6 DBI-1.3.0/DBI/R/dbListConnections.R | 6 DBI-1.3.0/DBI/R/dbListFields.R | 3 DBI-1.3.0/DBI/R/dbListFields_DBIConnection_Id.R | 6 DBI-1.3.0/DBI/R/dbListFields_DBIConnection_character.R | 6 DBI-1.3.0/DBI/R/dbListObjects.R | 3 DBI-1.3.0/DBI/R/dbListObjects_DBIConnection_ANY.R | 6 DBI-1.3.0/DBI/R/dbListResults.R | 6 DBI-1.3.0/DBI/R/dbListTables.R | 3 DBI-1.3.0/DBI/R/dbQuoteIdentifier.R | 6 DBI-1.3.0/DBI/R/dbQuoteIdentifier_DBIConnection.R | 32 DBI-1.3.0/DBI/R/dbQuoteLiteral.R | 6 DBI-1.3.0/DBI/R/dbQuoteLiteral_DBIConnection.R | 8 DBI-1.3.0/DBI/R/dbQuoteString.R | 6 DBI-1.3.0/DBI/R/dbQuoteString_DBIConnection.R | 26 DBI-1.3.0/DBI/R/dbReadTable.R | 15 DBI-1.3.0/DBI/R/dbReadTableArrow.R | 16 DBI-1.3.0/DBI/R/dbReadTableArrow_DBIConnection.R | 6 DBI-1.3.0/DBI/R/dbReadTable_DBIConnection_Id.R | 6 DBI-1.3.0/DBI/R/dbReadTable_DBIConnection_character.R | 14 DBI-1.3.0/DBI/R/dbRemoveTable.R | 15 DBI-1.3.0/DBI/R/dbRemoveTable_DBIConnection_Id.R | 6 DBI-1.3.0/DBI/R/dbRollback.R | 6 DBI-1.3.0/DBI/R/dbSendQueryArrow_DBIConnection.R | 13 DBI-1.3.0/DBI/R/dbSendStatement.R | 3 DBI-1.3.0/DBI/R/dbSendStatement_DBIConnection_character.R | 6 DBI-1.3.0/DBI/R/dbSetDataMappings.R | 10 DBI-1.3.0/DBI/R/dbUnloadDriver.R | 6 DBI-1.3.0/DBI/R/dbUnquoteIdentifier.R | 6 DBI-1.3.0/DBI/R/dbUnquoteIdentifier_DBIConnection.R | 11 DBI-1.3.0/DBI/R/dbWithTransaction.R | 6 DBI-1.3.0/DBI/R/dbWithTransaction_DBIConnection.R | 12 DBI-1.3.0/DBI/R/dbWriteTableArrow_DBIConnection.R | 16 DBI-1.3.0/DBI/R/dbWriteTable_DBIConnection_Id_ANY.R | 6 DBI-1.3.0/DBI/R/dbiDataType.R | 4 DBI-1.3.0/DBI/R/dbiDataType_ANY.R | 5 DBI-1.3.0/DBI/R/dbiDataType_character.R | 4 DBI-1.3.0/DBI/R/dbiDataType_default.R | 5 DBI-1.3.0/DBI/R/deprecated.R | 280 - DBI-1.3.0/DBI/R/fetch.R | 3 DBI-1.3.0/DBI/R/hms.R | 19 DBI-1.3.0/DBI/R/interpolate.R | 29 DBI-1.3.0/DBI/R/isSQLKeyword.R | 14 DBI-1.3.0/DBI/R/isSQLKeyword_DBIObject_character.R | 10 DBI-1.3.0/DBI/R/make.db.names.R | 14 DBI-1.3.0/DBI/R/make.db.names_DBIObject_character.R | 16 DBI-1.3.0/DBI/R/methods_as_rd.R | 16 DBI-1.3.0/DBI/R/otel.R |only DBI-1.3.0/DBI/R/rownames.R | 4 DBI-1.3.0/DBI/R/sqlAppendTable.R | 7 DBI-1.3.0/DBI/R/sqlAppendTableTemplate.R | 13 DBI-1.3.0/DBI/R/sqlAppendTable_DBIConnection.R | 25 DBI-1.3.0/DBI/R/sqlCreateTable.R | 7 DBI-1.3.0/DBI/R/sqlCreateTable_DBIConnection.R | 28 DBI-1.3.0/DBI/R/sqlData.R | 6 DBI-1.3.0/DBI/R/sqlInterpolate.R | 6 DBI-1.3.0/DBI/R/sqlInterpolate_DBIConnection.R | 22 DBI-1.3.0/DBI/R/sqlParseVariables.R | 6 DBI-1.3.0/DBI/R/sqlParseVariables_DBIConnection.R | 6 DBI-1.3.0/DBI/R/summary_DBIObject.R | 4 DBI-1.3.0/DBI/build/stage23.rdb |binary DBI-1.3.0/DBI/build/vignette.rds |binary DBI-1.3.0/DBI/inst/doc/DBI-1.Rmd | 2 DBI-1.3.0/DBI/inst/doc/DBI-1.html | 16 DBI-1.3.0/DBI/inst/doc/DBI-advanced.R | 6 DBI-1.3.0/DBI/inst/doc/DBI-advanced.Rmd | 6 DBI-1.3.0/DBI/inst/doc/DBI-advanced.html | 12 DBI-1.3.0/DBI/inst/doc/DBI-arrow.html | 9 DBI-1.3.0/DBI/inst/doc/DBI-proposal.Rmd | 2 DBI-1.3.0/DBI/inst/doc/DBI-proposal.html | 33 DBI-1.3.0/DBI/inst/doc/DBI.R | 29 DBI-1.3.0/DBI/inst/doc/DBI.Rmd | 17 DBI-1.3.0/DBI/inst/doc/DBI.html | 34 DBI-1.3.0/DBI/inst/doc/backend.R | 4 DBI-1.3.0/DBI/inst/doc/backend.Rmd | 4 DBI-1.3.0/DBI/inst/doc/backend.html | 7 DBI-1.3.0/DBI/inst/doc/spec.html | 2657 ++++++++-- DBI-1.3.0/DBI/man/DBI-package.Rd | 10 DBI-1.3.0/DBI/man/DBIConnection-class.Rd | 2 DBI-1.3.0/DBI/man/DBIConnector-class.Rd | 2 DBI-1.3.0/DBI/man/DBIObject-class.Rd | 2 DBI-1.3.0/DBI/man/dbAppendTable.Rd | 12 DBI-1.3.0/DBI/man/dbAppendTableArrow.Rd | 12 DBI-1.3.0/DBI/man/dbBind.Rd | 48 DBI-1.3.0/DBI/man/dbCallProc.Rd | 4 DBI-1.3.0/DBI/man/dbCanConnect.Rd | 8 DBI-1.3.0/DBI/man/dbClearResult.Rd | 6 DBI-1.3.0/DBI/man/dbColumnInfo.Rd | 6 DBI-1.3.0/DBI/man/dbConnect.Rd | 10 DBI-1.3.0/DBI/man/dbCreateTable.Rd | 10 DBI-1.3.0/DBI/man/dbCreateTableArrow.Rd | 10 DBI-1.3.0/DBI/man/dbDataType.Rd | 8 DBI-1.3.0/DBI/man/dbDisconnect.Rd | 6 DBI-1.3.0/DBI/man/dbDriver.Rd | 2 DBI-1.3.0/DBI/man/dbExecute.Rd | 10 DBI-1.3.0/DBI/man/dbExistsTable.Rd | 12 DBI-1.3.0/DBI/man/dbFetch.Rd | 12 DBI-1.3.0/DBI/man/dbFetchArrow.Rd | 6 DBI-1.3.0/DBI/man/dbFetchArrowChunk.Rd | 6 DBI-1.3.0/DBI/man/dbGetConnectArgs.Rd | 2 DBI-1.3.0/DBI/man/dbGetException.Rd | 4 DBI-1.3.0/DBI/man/dbGetInfo.Rd | 18 DBI-1.3.0/DBI/man/dbGetQuery.Rd | 10 DBI-1.3.0/DBI/man/dbGetQueryArrow.Rd | 10 DBI-1.3.0/DBI/man/dbGetRowCount.Rd | 12 DBI-1.3.0/DBI/man/dbGetRowsAffected.Rd | 12 DBI-1.3.0/DBI/man/dbGetStatement.Rd | 10 DBI-1.3.0/DBI/man/dbHasCompleted.Rd | 12 DBI-1.3.0/DBI/man/dbIsValid.Rd | 14 DBI-1.3.0/DBI/man/dbListFields.Rd | 10 DBI-1.3.0/DBI/man/dbListObjects.Rd | 20 DBI-1.3.0/DBI/man/dbListResults.Rd | 4 DBI-1.3.0/DBI/man/dbListTables.Rd | 8 DBI-1.3.0/DBI/man/dbQuoteIdentifier.Rd | 10 DBI-1.3.0/DBI/man/dbQuoteLiteral.Rd | 8 DBI-1.3.0/DBI/man/dbQuoteString.Rd | 8 DBI-1.3.0/DBI/man/dbReadTable.Rd | 14 DBI-1.3.0/DBI/man/dbReadTableArrow.Rd | 12 DBI-1.3.0/DBI/man/dbRemoveTable.Rd | 14 DBI-1.3.0/DBI/man/dbSendQuery.Rd | 18 DBI-1.3.0/DBI/man/dbSendQueryArrow.Rd | 18 DBI-1.3.0/DBI/man/dbSendStatement.Rd | 18 DBI-1.3.0/DBI/man/dbSetDataMappings.Rd | 2 DBI-1.3.0/DBI/man/dbUnquoteIdentifier.Rd | 14 DBI-1.3.0/DBI/man/dbWithTransaction.Rd | 12 DBI-1.3.0/DBI/man/dbWriteTable.Rd | 16 DBI-1.3.0/DBI/man/dbWriteTableArrow.Rd | 12 DBI-1.3.0/DBI/man/sqlData.Rd | 2 DBI-1.3.0/DBI/man/sqlInterpolate.Rd | 4 DBI-1.3.0/DBI/man/transactions.Rd | 6 DBI-1.3.0/DBI/tests/testthat/test-00-Id.R | 24 DBI-1.3.0/DBI/tests/testthat/test-DBItest.R | 2 DBI-1.3.0/DBI/tests/testthat/test-arrow.R | 6 DBI-1.3.0/DBI/tests/testthat/test-dbUnquoteIdentifier_DBIConnection.R | 5 DBI-1.3.0/DBI/tests/testthat/test-interpolate.R | 22 DBI-1.3.0/DBI/tests/testthat/test-methods.R | 14 DBI-1.3.0/DBI/tests/testthat/test-otel.R |only DBI-1.3.0/DBI/tests/testthat/test-quote.R | 36 DBI-1.3.0/DBI/tests/testthat/test-transactions_interrupt.R |only DBI-1.3.0/DBI/vignettes/DBI-1.Rmd | 2 DBI-1.3.0/DBI/vignettes/DBI-advanced.Rmd | 6 DBI-1.3.0/DBI/vignettes/DBI-proposal.Rmd | 2 DBI-1.3.0/DBI/vignettes/DBI.Rmd | 17 DBI-1.3.0/DBI/vignettes/backend.Rmd | 4 DBI-1.3.0/DBI/vignettes/spec.md | 1831 ++++++ 211 files changed, 5705 insertions(+), 1473 deletions(-)
Title: Compute the Median Ranking(s) According to the Kemeny's
Axiomatic Approach
Description: Compute the median ranking according to the Kemeny's axiomatic approach.
Rankings can or cannot contain ties, rankings can be both complete or incomplete.
The package contains both branch-and-bound algorithms and heuristic solutions recently proposed.
The searching space of the solution can either be restricted to the universe of the permutations or unrestricted to all possible ties.
The package also provide some useful utilities for deal with preference rankings, including both element-weight Kemeny distance and correlation coefficient.
This release includes also the median constrained bucket order algorithm.
This release removes the functions previously declared as deprecated.
These functions are now defunct and no longer available in the package.
Essential references:
Emond, E.J., and Mason, D.W. (2002) <doi:10.1002/mcda.313>;
D'Ambrosio, A., Amodio, S., and Iorio, C. (2015) <doi:10.1285/i20705948v8n2p198>;
Amodio, S., D'Ambrosio, A., and Siciliano R. (2016) <doi:10.1 [...truncated...]
Author: Antonio D'Ambrosio [aut, cre],
Sonia Amodio [ctb],
Giulio Mazzeo [ctb],
Alessandro Albano [ctb],
Antonella Plaia [ctb]
Maintainer: Antonio D'Ambrosio <antdambr@unina.it>
Diff between ConsRank versions 2.1.5 dated 2025-04-15 and 3.0 dated 2026-02-25
ConsRank-2.1.5/ConsRank/R/BBFULL.R |only ConsRank-2.1.5/ConsRank/R/DECOR.R |only ConsRank-2.1.5/ConsRank/R/EMCons.R |only ConsRank-2.1.5/ConsRank/R/FASTDECOR.R |only ConsRank-2.1.5/ConsRank/R/FASTcons.R |only ConsRank-2.1.5/ConsRank/R/QuickCons.R |only ConsRank-2.1.5/ConsRank/R/labels.R |only ConsRank-2.1.5/ConsRank/R/weighted_KemenyDist&TauX.R |only ConsRank-2.1.5/ConsRank/man/BBFULL.Rd |only ConsRank-2.1.5/ConsRank/man/ConsRank-deprecated.Rd |only ConsRank-2.1.5/ConsRank/man/DECOR.Rd |only ConsRank-2.1.5/ConsRank/man/EMCons.Rd |only ConsRank-2.1.5/ConsRank/man/FASTDECOR.Rd |only ConsRank-2.1.5/ConsRank/man/FASTcons.Rd |only ConsRank-2.1.5/ConsRank/man/QuickCons.Rd |only ConsRank-2.1.5/ConsRank/man/labels.Rd |only ConsRank-3.0/ConsRank/DESCRIPTION | 26 ConsRank-3.0/ConsRank/MD5 | 95 - ConsRank-3.0/ConsRank/NAMESPACE | 90 - ConsRank-3.0/ConsRank/R/Consrank_pakage.R |only ConsRank-3.0/ConsRank/R/MCBO.R |only ConsRank-3.0/ConsRank/R/RcppExports.R |only ConsRank-3.0/ConsRank/R/combinpmatr.R | 148 + ConsRank-3.0/ConsRank/R/consrank.R | 1572 +++++++++++++------ ConsRank-3.0/ConsRank/R/deprecated.R | 108 + ConsRank-3.0/ConsRank/R/kemenydesign.R | 113 - ConsRank-3.0/ConsRank/R/kemenydesign_cpp.R |only ConsRank-3.0/ConsRank/R/newpolyplot.R |only ConsRank-3.0/ConsRank/R/order2rank.R | 39 ConsRank-3.0/ConsRank/R/polyplot.R | 1194 +++++++------- ConsRank-3.0/ConsRank/R/rank2order.R | 89 - ConsRank-3.0/ConsRank/R/scorematrix.R | 64 ConsRank-3.0/ConsRank/R/weightedKemenyDistTauX.R |only ConsRank-3.0/ConsRank/build |only ConsRank-3.0/ConsRank/man/ConsRank-defunct.Rd |only ConsRank-3.0/ConsRank/man/combinpmatr.Rd | 96 - ConsRank-3.0/ConsRank/man/consrank.Rd | 211 +- ConsRank-3.0/ConsRank/man/iw_kemenyd.Rd | 114 - ConsRank-3.0/ConsRank/man/iw_tau_x.Rd | 116 - ConsRank-3.0/ConsRank/man/iwcombinpmatr.Rd | 96 - ConsRank-3.0/ConsRank/man/iwquickcons.Rd | 132 - ConsRank-3.0/ConsRank/man/kemenyd.Rd | 80 ConsRank-3.0/ConsRank/man/kemenydesign.Rd | 53 ConsRank-3.0/ConsRank/man/kemenydesign_cpp.Rd |only ConsRank-3.0/ConsRank/man/kemenyscore.Rd | 68 ConsRank-3.0/ConsRank/man/mcbo.Rd |only ConsRank-3.0/ConsRank/man/order2rank.Rd | 66 ConsRank-3.0/ConsRank/man/partitions.Rd | 100 - ConsRank-3.0/ConsRank/man/polyplot.Rd | 99 - ConsRank-3.0/ConsRank/man/polyplotnew.Rd |only ConsRank-3.0/ConsRank/man/rank2order.Rd | 70 ConsRank-3.0/ConsRank/man/reordering.Rd | 40 ConsRank-3.0/ConsRank/man/scorematrix.Rd | 70 ConsRank-3.0/ConsRank/man/stirling2.Rd | 74 ConsRank-3.0/ConsRank/man/tabulaterows.Rd | 100 - ConsRank-3.0/ConsRank/man/tau_x.Rd | 88 - ConsRank-3.0/ConsRank/man/univranks.Rd | 122 - ConsRank-3.0/ConsRank/src |only 58 files changed, 3147 insertions(+), 2186 deletions(-)
Title: Calendrical Calculations
Description: An R implementation of the algorithms described in Reingold and
Dershowitz (4th ed., Cambridge University Press, 2018) <doi:10.1017/9781107415058>,
allowing conversion between many different calendar systems. Cultural and religious holidays
from several calendars can be calculated.
Author: Rob Hyndman [aut, cre, cph] ,
Edward Reingold [cph, ctb] ,
Nachum Dershowitz [cph, ctb]
Maintainer: Rob Hyndman <Rob.Hyndman@monash.edu>
Diff between calcal versions 1.0.2 dated 2026-02-09 and 1.0.3 dated 2026-02-25
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- NEWS.md | 3 +++ R/bahai.R | 9 ++++++--- inst/doc/new_calendar.html | 4 ++-- tests/testthat/test-common.R | 33 ++++++++++++++++++--------------- 6 files changed, 37 insertions(+), 28 deletions(-)
Title: A Computational Tool for Astrochronology
Description: Routines for astrochronologic testing, astronomical time scale construction, and time series analysis <doi:10.1016/j.earscirev.2018.11.015>. Also included are a range of statistical analysis and modeling routines that are relevant to time scale development and paleoclimate analysis.
Author: Stephen Meyers [aut, cre],
Alberto Malinverno [ctb],
Linda Hinnov [ctb],
Christian Zeeden [ctb],
Huaran Liu [ctb],
Vincent Moron [ctb],
Michel Crucifix [ctb]
Maintainer: Stephen Meyers <smeyers@geology.wisc.edu>
Diff between astrochron versions 1.5 dated 2025-04-28 and 1.6 dated 2026-02-25
astrochron-1.5/astrochron/R/FUNCTION-asm_removed.R |only astrochron-1.5/astrochron/R/FUNCTION-calcPeriods_v5.R |only astrochron-1.5/astrochron/R/FUNCTION-eAsm_removed.R |only astrochron-1.5/astrochron/R/FUNCTION-getData_v9.R |only astrochron-1.6/astrochron/DESCRIPTION | 8 +-- astrochron-1.6/astrochron/MD5 | 33 +++++++------ astrochron-1.6/astrochron/NAMESPACE | 7 ++ astrochron-1.6/astrochron/NEWS | 21 +++++++- astrochron-1.6/astrochron/R/FUNCTION-calcPeriods_v7.R |only astrochron-1.6/astrochron/R/FUNCTION-getData_v10.R |only astrochron-1.6/astrochron/R/FUNCTION-timeOptBMCMC_v7.R |only astrochron-1.6/astrochron/R/FUNCTION-timeOptBMCMCplot_v5.R |only astrochron-1.6/astrochron/R/FUNCTION-timeOptBSim_v5.R |only astrochron-1.6/astrochron/R/FUNCTION-timeOptB_v5.R |only astrochron-1.6/astrochron/R/dotFUNCTIONS-timeOptBMCMC_v7.R |only astrochron-1.6/astrochron/R/startupMessage.R | 4 - astrochron-1.6/astrochron/man/astrochron-package.Rd | 4 - astrochron-1.6/astrochron/man/calcPeriods.Rd | 17 +++++- astrochron-1.6/astrochron/man/getData.Rd | 2 astrochron-1.6/astrochron/man/tanerFC.Rd | 2 astrochron-1.6/astrochron/man/timeOptB.Rd |only astrochron-1.6/astrochron/man/timeOptBMCMC.Rd |only astrochron-1.6/astrochron/man/timeOptBMCMCplot.Rd |only astrochron-1.6/astrochron/man/timeOptBSim.Rd |only astrochron-1.6/astrochron/man/timeOptMCMC.Rd | 8 +-- 25 files changed, 74 insertions(+), 32 deletions(-)