Title: Difference-in-Differences with Unpoolable Data
Description: A framework for estimating difference-in-differences with
unpoolable data, based on Karim, Webb, Austin, and Strumpf (2025)
<doi:10.48550/arXiv.2403.15910>. Supports common or staggered adoption, multiple
groups, and the inclusion of covariates. Also computes p-values for the
aggregate average treatment effect on the treated via the
randomization inference procedure described in MacKinnon and Webb (2020)
<doi:10.1016/j.jeconom.2020.04.024>.
Author: Eric Jamieson [aut, cre, cph]
Maintainer: Eric Jamieson <ericbrucejamieson@gmail.com>
Diff between undidR versions 3.0.1 dated 2026-02-16 and 3.0.2 dated 2026-03-02
DESCRIPTION | 6 +-- MD5 | 16 ++++----- NEWS.md | 5 ++ R/undid_stage_three.r | 21 ++++++++++-- R/utils.R | 6 +-- README.md | 28 ++++++++-------- inst/doc/undidR.html | 56 ++++++++++++++++---------------- man/undid_stage_three.Rd | 4 +- tests/testthat/test-undid_stage_three.r | 29 ++++++++++++++++ 9 files changed, 109 insertions(+), 62 deletions(-)
Title: Robust Multi-Model Subset Selection
Description: Efficient algorithms for generating ensembles of robust, sparse and diverse models via robust
multi-model subset selection (RMSS). The robust ensembles are generated by minimizing the sum of
the least trimmed square loss of the models in the ensembles under constraints for the size of
the models and the sharing of the predictors. Tuning parameters for the robustness, sparsity and
diversity of the robust ensemble are selected by cross-validation.
Author: Anthony Christidis [aut, cre],
Gabriela Cohen-Freue [aut]
Maintainer: Anthony Christidis <anthony.christidis@stat.ubc.ca>
Diff between RMSS versions 1.2.3 dated 2025-12-17 and 1.2.4 dated 2026-03-02
DESCRIPTION | 13 +++++++------ MD5 | 8 ++++---- NEWS | 5 ++++- R/RMSS.R | 6 +++--- R/cv.RMSS.R | 6 +++--- 5 files changed, 21 insertions(+), 17 deletions(-)
Title: Interface to the 'JWSACruncher' of 'JDemetra+'
Description: 'JDemetra+' (<https://github.com/jdemetra/jdemetra-app>) is the seasonal adjustment software officially recommended
to the members of the European Statistical System and the European System of Central Banks. Seasonal adjustment models performed
with 'JDemetra+' can be stored into workspaces. 'JWSACruncher' (<https://github.com/jdemetra/jwsacruncher/releases> for v2 and <https://github.com/jdemetra/jdplus-main/releases> for v3) is a console tool that
re-estimates all the multi-processing defined in a workspace and to export the result. 'rjwsacruncher' allows to launch easily the 'JWSACruncher'.
Author: Alain Quartier-la-Tente [aut, cre] ,
Institut national de la statistique et des etudes economiques [cph]
Maintainer: Alain Quartier-la-Tente <alain.quartier@yahoo.fr>
Diff between rjwsacruncher versions 0.2.2 dated 2025-07-18 and 0.2.3 dated 2026-03-02
DESCRIPTION | 8 +- MD5 | 24 ++++--- NAMESPACE | 2 NEWS.md | 14 ++++ R/Cruncher.R | 10 ++- R/ckeck_config.R |only R/download_cruncher.R | 110 ++++++++++++++++++++++++++++++++++-- R/onLoad.R | 10 ++- R/param_file.R | 10 ++- inst/doc/run_jwsacruncher.html | 4 - man/check_cruncher_configuration.Rd |only man/create_param_file.Rd | 2 man/default_param_file.Rd | 2 man/download_cruncher.Rd | 23 +++++-- 14 files changed, 183 insertions(+), 36 deletions(-)
Title: Export Domain Logic from Shiny using Meta-Programming
Description: Provides tools for capturing logic in a Shiny app and
exposing it as code that can be run outside of Shiny (e.g., from an R
console). It also provides tools for bundling both the code and
results to the end user.
Author: Joe Cheng [aut],
Carson Sievert [cre, aut] ,
RStudio [cph]
Maintainer: Carson Sievert <carson@rstudio.com>
Diff between shinymeta versions 0.2.1 dated 2025-04-11 and 0.2.2 dated 2026-03-02
DESCRIPTION | 37 +++++++----- LICENSE |only MD5 | 19 +++--- NEWS.md | 16 +++-- R/utils.R | 29 ++++++++-- README.md | 4 - tests/testthat/_snaps/format.md | 16 ++--- tests/testthat/_snaps/metareactive.md | 4 - tests/testthat/_snaps/render.md | 2 tests/testthat/test-report.R | 2 tests/testthat/test-utils.R | 98 ++++++++++++++++++++++++++++++++++ 11 files changed, 178 insertions(+), 49 deletions(-)
Title: Database Interface and 'MySQL' Driver for R
Description: Legacy 'DBI' interface to 'MySQL' / 'MariaDB' based on old code
ported from S-PLUS. A modern 'MySQL' client written in 'C++' is available
from the 'RMariaDB' package.
Author: Jeroen Ooms [aut, cre] ,
David James [aut],
Saikat DebRoy [aut],
Hadley Wickham [aut],
Jeffrey Horner [aut],
RStudio [cph]
Maintainer: Jeroen Ooms <jeroenooms@gmail.com>
Diff between RMySQL versions 0.11.1 dated 2025-04-01 and 0.11.2 dated 2026-03-02
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS.md | 4 ++++ configure | 4 ---- 4 files changed, 11 insertions(+), 11 deletions(-)
Title: Minimalist Async Evaluation Framework for R
Description: Evaluates R expressions asynchronously and in parallel,
locally or distributed across networks. An official parallel cluster
type for R. Built on 'nanonext' and 'NNG', its non-polling,
event-driven architecture scales from a laptop to thousands of
processes across high-performance computing clusters and cloud
platforms. Features FIFO scheduling with task cancellation, promises
for reactive programming, 'OpenTelemetry' distributed tracing, and
custom serialization for cross-language data types.
Author: Charlie Gao [aut, cre] ,
Joe Cheng [ctb],
Posit Software, PBC [cph, fnd] ,
Hibiki AI Limited [cph]
Maintainer: Charlie Gao <charlie.gao@posit.co>
Diff between mirai versions 2.6.0 dated 2026-02-13 and 2.6.1 dated 2026-03-02
DESCRIPTION | 8 +- MD5 | 22 +++--- NAMESPACE | 2 NEWS.md | 8 ++ R/daemons.R | 114 +++++++++++++------------------- R/launchers.R | 156 ++++++++++++++++++++++++++------------------- R/mirai-package.R | 10 +- inst/doc/v02-promises.Rmd | 34 ++++----- inst/doc/v02-promises.html | 34 ++++----- man/daemons.Rd | 4 - tests/tests.R | 70 ++++++++++++++++---- vignettes/v02-promises.Rmd | 34 ++++----- 12 files changed, 279 insertions(+), 217 deletions(-)
Title: Rule- And Instance-Based Regression Modeling
Description: Regression modeling using rules with added instance-based
corrections.
Author: Max Kuhn [aut, cre],
Steve Weston [ctb],
Chris Keefer [ctb],
Nathan Coulter [ctb],
Ross Quinlan [aut] ,
Rulequest Research Pty Ltd. [cph]
Maintainer: Max Kuhn <mxkuhn@gmail.com>
Diff between Cubist versions 0.5.1 dated 2025-10-25 and 0.6.0 dated 2026-03-02
DESCRIPTION | 10 MD5 | 82 ++- NEWS.md | 10 R/QuinlanAttributes.R | 34 - R/cubist.R | 303 +++++++++----- R/exportCubistFiles.R | 39 - R/formatAttributes.R | 4 R/lattice.R | 126 +++-- R/makeDataFile.R | 27 - R/makeNamesFile.R | 47 -- R/parseCubistModel.R | 648 ++++++++++++++---------------- R/predict.cubist.R | 61 +- R/varUsage.R | 28 - build/vignette.rds |binary inst/doc/cubist.html | 23 - man/cubist.default.Rd | 16 man/cubistControl.Rd | 8 man/dotplot.cubist.Rd | 8 src/contin.c | 2 src/defns.h | 2 src/formrules.c | 25 - src/getnames.c | 2 src/instance.c | 17 src/modelfiles.c | 2 src/rules.c | 4 src/sample.c | 15 src/strbuf.c | 2 src/trees.c | 2 tests/testthat/_snaps/basic-execution.md | 39 + tests/testthat/_snaps/committees.md |only tests/testthat/_snaps/cubist.md |only tests/testthat/_snaps/edge-cases.md |only tests/testthat/_snaps/lattice.md |only tests/testthat/_snaps/parseCubistModel.md |only tests/testthat/_snaps/predict.cubist.md |only tests/testthat/_snaps/varUsage.md |only tests/testthat/helper-data.R |only tests/testthat/test-QuinlanAttributes.R |only tests/testthat/test-basic-execution.R | 54 ++ tests/testthat/test-committees.R |only tests/testthat/test-cubist.R |only tests/testthat/test-edge-cases.R |only tests/testthat/test-exportCubistFiles.R |only tests/testthat/test-lattice.R |only tests/testthat/test-parseCubistModel.R |only tests/testthat/test-predict.cubist.R |only tests/testthat/test-summary.R |only tests/testthat/test-varUsage.R |only tests/testthat/test_data |only tests/testthat/test_model.data |only tests/testthat/test_model.model |only tests/testthat/test_model.names |only 52 files changed, 961 insertions(+), 679 deletions(-)
Title: High Dimensional Locally-Linear Mapping
Description: Provides a tool for non linear mapping (non linear regression) using a mixture of regression model and an inverse regression strategy. The methods include the GLLiM model (see Deleforge et al (2015) <DOI:10.1007/s11222-014-9461-5>) based on Gaussian mixtures and a robust version of GLLiM, named SLLiM (see Perthame et al (2016) <DOI:10.1016/j.jmva.2017.09.009>) based on a mixture of Generalized Student distributions. The methods also include BLLiM (see Blein--Nicolas et al (2024) <DOI:10.1093/jrsssc/qlae012>) which is an extension of GLLiM with a sparse block diagonal structure for large covariance matrices (particularly interesting for transcriptomic data).
Author: Emeline Perthame [aut, cre] ,
Florence Forbes [aut] ,
Antoine Deleforge [aut] ,
Emilie Devijver [aut] ,
Melina Gallopin [aut]
Maintainer: Emeline Perthame <emeline.perthame@pasteur.fr>
Diff between xLLiM versions 2.3 dated 2023-10-27 and 2.3.1 dated 2026-03-02
DESCRIPTION | 36 ++++++++++++++++++++++++++++++------ MD5 | 7 ++++--- build |only man/bllim.Rd | 4 ++-- man/xLLiM-package.Rd | 8 ++++---- 5 files changed, 40 insertions(+), 15 deletions(-)
Title: High-Performance Matrix Market File Operations
Description: An interface to the 'fast_matrix_market' 'C++' library, this package offers efficient read and write operations for Matrix Market files in R. It supports both sparse and dense matrix formats. Peer-reviewed at 'rOpenSci' (<https://github.com/ropensci/software-review/issues/606>).
Author: Rohit Goswami [aut, cre] ,
Ildiko Czeller [rev] ,
Adam Lugowski [ctb]
Maintainer: Rohit Goswami <rgoswami@ieee.org>
Diff between fastMatMR versions 1.2.7 dated 2026-03-02 and 1.2.8 dated 2026-03-02
DESCRIPTION | 6 +++--- MD5 | 9 +++++---- NEWS.md | 7 +++++++ inst/doc/fastMatMR.R | 20 ++++++++++---------- src/fast_matrix_market/PATCHES |only src/fast_matrix_market/read_body_threads.hpp | 2 +- 6 files changed, 26 insertions(+), 18 deletions(-)
Title: Soil Physical Analysis
Description: Basic and model-based soil physical analyses.
Author: Anderson Rodrigo da Silva [aut, cre] ,
Renato Paiva de Lima [aut]
Maintainer: Anderson Rodrigo da Silva <anderson.agro@hotmail.com>
Diff between soilphysics versions 5.0 dated 2022-06-07 and 5.1 dated 2026-03-02
DESCRIPTION | 15 - MD5 | 16 - NEWS | 23 +- build/vignette.rds |binary inst/CITATION | 76 +++----- inst/doc/vignette.R | 10 - inst/doc/vignette.html | 398 ++++++++++++++++++++++++++++++++++----------- man/llwrPTF.Rd | 40 ++-- man/soilphysics-package.Rd | 38 ++-- 9 files changed, 416 insertions(+), 200 deletions(-)
Title: Artificial Intelligence for Education
Description: In social and educational settings, the use of Artificial
Intelligence (AI) is a challenging task. Relevant data is often only
available in handwritten forms, or the use of data is restricted by
privacy policies. This often leads to small data sets. Furthermore, in
the educational and social sciences, data is often unbalanced in terms
of frequencies. To support educators as well as educational and social
researchers in using the potentials of AI for their work, this package
provides a unified interface for neural nets in 'PyTorch' to deal with
natural language problems. In addition, the package ships with a shiny
app, providing a graphical user interface. This allows the usage of
AI for people without skills in writing python/R scripts. The tools
integrate existing mathematical and statistical methods for dealing
with small data sets via pseudo-labeling (e.g. Cascante-Bonilla et al.
(2020) <doi:10.48550/arXiv.2001.06001>) and imbalanced data via the
creation of synthetic cases [...truncated...]
Author: Berding Florian [aut, cre] ,
Tykhonova Yuliia [aut] ,
Pargmann Julia [ctb] ,
Leube Anna [ctb] ,
Riebenbauer Elisabeth [ctb] ,
Rebmann Karin [ctb],
Slopinski Andreas [ctb]
Maintainer: Berding Florian <florian.berding@uni-hamburg.de>
Diff between aifeducation versions 1.1.3 dated 2025-11-19 and 1.1.4 dated 2026-03-02
DESCRIPTION | 6 MD5 | 175 +++---- NAMESPACE | 3 NEWS.md | 30 + R/Studio_ExtendedTasks.R | 13 R/Studio_ProgressModal.R | 10 R/def_ParameterDefinitions.R | 53 +- R/install_and_config.R | 61 +- R/obj_BaseModelCore.R | 75 ++- R/obj_ClassifiersBasedOnTextEmbeddings.R | 48 +- R/obj_DataManager.R | 38 - R/obj_FeatureExtractor.R | 24 - R/obj_LargeDataSetBase.R | 30 + R/obj_ModelsBasedOnTextEmbeddings.R | 12 R/obj_TEClassifierProtoNet.R | 2 R/obj_TEClassifiersBasedOnProtoNet.R | 12 R/obj_TEClassifiersBasedOnRegular.R | 4 R/obj_TextEmbeddingModel.R | 4 R/onLoad.R | 4 R/utils_Studio.R | 5 R/utils_general.R | 8 R/utils_log.R | 20 R/utils_plot.R | 8 R/utils_python_data_management.R | 115 ++++ R/utils_transformer_creation.R | 2 README.md | 2 build/partial.rdb |binary build/vignette.rds |binary inst/doc/aifeducation.html | 14 inst/python/FillMaskForMPLM.py | 24 - inst/python/pytorch_autoencoder.py | 48 +- inst/python/pytorch_classifier_models.py | 56 +- inst/python/pytorch_cls_training_loops.py | 78 +-- inst/python/pytorch_layers.py | 171 ++----- inst/python/pytorch_layers_normalization.py | 331 +++++++++++++- inst/python/pytorch_old_scripts.py | 43 - inst/python/pytorch_optimizer_scheduler.py |only inst/python/pytorch_predict_batch.py | 1 inst/python/pytorch_stack_layers.py | 67 -- man/BaseModelCore.Rd | 6 man/BaseModelMPNet.Rd | 4 man/LargeDataSetBase.Rd | 29 + man/LargeDataSetForText.Rd | 1 man/LargeDataSetForTextEmbeddings.Rd | 1 man/TEClassifierParallel.Rd | 12 man/TEClassifierParallelPrototype.Rd | 12 man/TEClassifierSequential.Rd | 10 man/TEClassifierSequentialPrototype.Rd | 10 man/TEClassifiersBasedOnProtoNet.Rd | 12 man/TEClassifiersBasedOnRegular.Rd | 12 man/TEFeatureExtractor.Rd | 24 - man/TextEmbeddingModel.Rd | 2 man/WordPieceTokenizer.Rd | 2 man/class_vector_to_py_dataset.Rd | 2 man/create_py_dataset_cache_file_path.Rd |only man/data.frame_to_py_dataset.Rd | 2 man/doc_formula.Rd | 68 +- man/extract_column_from_py_dataset.Rd |only man/get_batches_index.Rd | 2 man/inspect_tmp_dir.Rd | 34 - man/install_aifeducation.Rd | 2 man/install_py_modules.Rd | 16 man/prepare_r_array_for_dataset.Rd | 2 man/prepare_session.Rd | 11 man/py_dataset_to_embeddings.Rd | 2 man/reduce_to_unique.Rd | 2 man/tensor_list_to_numpy.Rd | 2 man/tensor_to_numpy.Rd | 2 man/update_aifeducation.Rd | 2 tests/testthat/test-00_02_setup_Classifiers.R | 1 tests/testthat/test-01_01_install_and_config.R | 6 tests/testthat/test-01_04_R_and_Python_utils.R | 6 tests/testthat/test-01_05_KNNOR.R | 2 tests/testthat/test-01_06_logging.R | 2 tests/testthat/test-01_07_DataCollator.R | 1 tests/testthat/test-02_01_pytorch_loss_fcts.R | 1 tests/testthat/test-02_02_pytorch_layers.R | 304 ++++++++---- tests/testthat/test-02_03_pytorch_stack_layers.R | 67 -- tests/testthat/test-02_05_tokenizer.R | 1 tests/testthat/test-02_06_BaseModels.R | 1 tests/testthat/test-03_01_LargeDataSetForTexts.R | 127 ++--- tests/testthat/test-03_02_LargeDataSetForTextEmbeddings.R | 22 tests/testthat/test-03_03_EmbeddedText.R | 1 tests/testthat/test-03_04_DataManager.R | 19 tests/testthat/test-03_05_FeatureExtractor.R | 15 tests/testthat/test-03_06_TextEmbeddingModels.R | 1 tests/testthat/test-03_08_TEClassifiers_core.R | 30 - tests/testthat/test-03_09_TEClassifiersProtoNet_old.R | 1 tests/testthat/test-03_09_TEClassifiersPrototype.R | 1 tests/testthat/test-04_01_LoadOldModels.R | 5 90 files changed, 1624 insertions(+), 873 deletions(-)
Title: Modular Monte Carlo Risk Analysis
Description: Framework for building modular Monte Carlo risk analysis models. It extends the capabilities of 'mc2d' to facilitate working with multiple risk pathways, variates and scenarios. It provides tools to organize risk analysis in independent flexible modules, perform multivariate Monte Carlo node operations, automate the creation of Monte Carlo nodes and visualise risk analysis models. For more details see Ciria (2025) <https://nataliaciria.com/mcmodule/>.
Author: Natalia Ciria [aut, cre, cph] ,
Alberto Allepuz [ths] ,
Giovanna Ciaravino [ths]
Maintainer: Natalia Ciria <nataliaciria@hotmail.com>
Diff between mcmodule versions 1.1.1 dated 2025-11-25 and 1.2.0 dated 2026-03-02
mcmodule-1.1.1/mcmodule/man/mc_summary_keys.Rd |only mcmodule-1.1.1/mcmodule/man/node_list_summary.Rd |only mcmodule-1.2.0/mcmodule/DESCRIPTION | 14 mcmodule-1.2.0/mcmodule/MD5 | 165 - mcmodule-1.2.0/mcmodule/NAMESPACE | 9 mcmodule-1.2.0/mcmodule/NEWS.md | 171 + mcmodule-1.2.0/mcmodule/R/add_prefix.R | 114 - mcmodule-1.2.0/mcmodule/R/animal_imports.R | 2 mcmodule-1.2.0/mcmodule/R/combine_modules.R | 29 mcmodule-1.2.0/mcmodule/R/create_mcnodes.R | 222 +- mcmodule-1.2.0/mcmodule/R/dim_match.R | 102 mcmodule-1.2.0/mcmodule/R/eval_module.R | 325 ++- mcmodule-1.2.0/mcmodule/R/get_node_list.R | 213 + mcmodule-1.2.0/mcmodule/R/imports_data.R | 48 mcmodule-1.2.0/mcmodule/R/imports_exp.R | 2 mcmodule-1.2.0/mcmodule/R/imports_mcmodule.R | 16 mcmodule-1.2.0/mcmodule/R/imports_mctable.R | 37 mcmodule-1.2.0/mcmodule/R/mc_analysis.R |only mcmodule-1.2.0/mcmodule/R/mc_filter.R |only mcmodule-1.2.0/mcmodule/R/mc_network.R | 386 ++- mcmodule-1.2.0/mcmodule/R/mc_plot.R |only mcmodule-1.2.0/mcmodule/R/mc_summary.R | 140 - mcmodule-1.2.0/mcmodule/R/mcmodule_info.R |only mcmodule-1.2.0/mcmodule/R/mcnode_na_rm.R | 2 mcmodule-1.2.0/mcmodule/R/prevalence_region.R | 36 mcmodule-1.2.0/mcmodule/R/set_data_keys.R | 49 mcmodule-1.2.0/mcmodule/R/set_mctable.R | 106 mcmodule-1.2.0/mcmodule/R/test_sensitivity.R | 4 mcmodule-1.2.0/mcmodule/R/totals.R | 154 - mcmodule-1.2.0/mcmodule/R/utils.R | 23 mcmodule-1.2.0/mcmodule/R/which_mcnode.R |only mcmodule-1.2.0/mcmodule/README.md | 14 mcmodule-1.2.0/mcmodule/data/imports_mcmodule.rda |binary mcmodule-1.2.0/mcmodule/data/imports_mctable.rda |binary mcmodule-1.2.0/mcmodule/inst/CITATION | 2 mcmodule-1.2.0/mcmodule/inst/doc/mcmodule.R | 94 mcmodule-1.2.0/mcmodule/inst/doc/mcmodule.Rmd | 164 + mcmodule-1.2.0/mcmodule/inst/doc/mcmodule.html | 1077 +++++----- mcmodule-1.2.0/mcmodule/inst/doc/multivariate_operations.html | 22 mcmodule-1.2.0/mcmodule/man/add_group_id.Rd | 15 mcmodule-1.2.0/mcmodule/man/add_prefix.Rd | 16 mcmodule-1.2.0/mcmodule/man/agg_totals.Rd | 35 mcmodule-1.2.0/mcmodule/man/animal_imports.Rd | 2 mcmodule-1.2.0/mcmodule/man/at_least_one.Rd | 24 mcmodule-1.2.0/mcmodule/man/check_mctable.Rd | 17 mcmodule-1.2.0/mcmodule/man/combine_modules.Rd | 11 mcmodule-1.2.0/mcmodule/man/create_mcnodes.Rd | 27 mcmodule-1.2.0/mcmodule/man/eval_module.Rd | 98 mcmodule-1.2.0/mcmodule/man/get_edge_table.Rd | 15 mcmodule-1.2.0/mcmodule/man/get_node_table.Rd | 15 mcmodule-1.2.0/mcmodule/man/imports_data.Rd | 2 mcmodule-1.2.0/mcmodule/man/imports_exp.Rd | 2 mcmodule-1.2.0/mcmodule/man/imports_mcmodule.Rd | 16 mcmodule-1.2.0/mcmodule/man/imports_mctable.Rd | 5 mcmodule-1.2.0/mcmodule/man/keys_match.Rd | 6 mcmodule-1.2.0/mcmodule/man/mc_filter.Rd |only mcmodule-1.2.0/mcmodule/man/mc_keys.Rd | 13 mcmodule-1.2.0/mcmodule/man/mc_match.Rd | 25 mcmodule-1.2.0/mcmodule/man/mc_match_data.Rd | 26 mcmodule-1.2.0/mcmodule/man/mc_network.Rd | 33 mcmodule-1.2.0/mcmodule/man/mc_plot.Rd |only mcmodule-1.2.0/mcmodule/man/mc_summary.Rd | 40 mcmodule-1.2.0/mcmodule/man/mcmodule_converg.Rd |only mcmodule-1.2.0/mcmodule/man/mcmodule_corr.Rd |only mcmodule-1.2.0/mcmodule/man/mcmodule_dim_check.Rd |only mcmodule-1.2.0/mcmodule/man/mcmodule_info.Rd |only mcmodule-1.2.0/mcmodule/man/mcmodule_to_matrices.Rd |only mcmodule-1.2.0/mcmodule/man/mcmodule_to_mc.Rd |only mcmodule-1.2.0/mcmodule/man/mcnode_na_rm.Rd | 3 mcmodule-1.2.0/mcmodule/man/prevalence_region.Rd | 4 mcmodule-1.2.0/mcmodule/man/reset_data_keys.Rd | 7 mcmodule-1.2.0/mcmodule/man/reset_mctable.Rd | 6 mcmodule-1.2.0/mcmodule/man/set_data_keys.Rd | 18 mcmodule-1.2.0/mcmodule/man/set_mctable.Rd | 30 mcmodule-1.2.0/mcmodule/man/test_sensitivity.Rd | 4 mcmodule-1.2.0/mcmodule/man/tidy_mcnode.Rd |only mcmodule-1.2.0/mcmodule/man/trial_totals.Rd | 47 mcmodule-1.2.0/mcmodule/man/visNetwork_edges.Rd | 11 mcmodule-1.2.0/mcmodule/man/visNetwork_nodes.Rd | 28 mcmodule-1.2.0/mcmodule/man/which_mcnode.Rd |only mcmodule-1.2.0/mcmodule/man/which_mcnode_inf.Rd |only mcmodule-1.2.0/mcmodule/man/which_mcnode_na.Rd |only mcmodule-1.2.0/mcmodule/man/wif_match.Rd | 19 mcmodule-1.2.0/mcmodule/tests/testthat/test-add_prefix.R | 178 + mcmodule-1.2.0/mcmodule/tests/testthat/test-combine_modules.R | 169 + mcmodule-1.2.0/mcmodule/tests/testthat/test-create_mcnodes.R | 38 mcmodule-1.2.0/mcmodule/tests/testthat/test-eval_module.R | 194 + mcmodule-1.2.0/mcmodule/tests/testthat/test-get_node_list.R | 94 mcmodule-1.2.0/mcmodule/tests/testthat/test-mc_analysis.R |only mcmodule-1.2.0/mcmodule/tests/testthat/test-mc_filter.R |only mcmodule-1.2.0/mcmodule/tests/testthat/test-mc_network.R | 160 + mcmodule-1.2.0/mcmodule/tests/testthat/test-mc_plot.R |only mcmodule-1.2.0/mcmodule/tests/testthat/test-set_mctable.R | 59 mcmodule-1.2.0/mcmodule/tests/testthat/test-which_mcnode.R |only mcmodule-1.2.0/mcmodule/vignettes/mcmodule.Rmd | 164 + 95 files changed, 3794 insertions(+), 1624 deletions(-)
Title: Additional Predictor with Maximum Effect Size
Description: Methods of selecting one from many numeric predictors for a regression model, to ensure that the additional predictor has the maximum effect size.
Author: Tingting Zhan [aut, cre]
Maintainer: Tingting Zhan <tingtingzhan@gmail.com>
Diff between maxEff versions 0.2.2 dated 2026-02-01 and 0.2.3 dated 2026-03-02
maxEff-0.2.2/maxEff/build |only maxEff-0.2.2/maxEff/inst |only maxEff-0.2.2/maxEff/vignettes |only maxEff-0.2.3/maxEff/DESCRIPTION | 16 +++--- maxEff-0.2.3/maxEff/MD5 | 58 +++++++++++-------------- maxEff-0.2.3/maxEff/NAMESPACE | 6 -- maxEff-0.2.3/maxEff/R/0PACKAGE.R | 7 --- maxEff-0.2.3/maxEff/R/add_S3.R | 4 - maxEff-0.2.3/maxEff/R/add_dummy.R | 16 +++--- maxEff-0.2.3/maxEff/R/add_dummy_partition.R | 8 +-- maxEff-0.2.3/maxEff/R/add_numeric.R | 11 +--- maxEff-0.2.3/maxEff/R/node1.R | 19 ++++++-- maxEff-0.2.3/maxEff/R/prepare_add.R | 1 maxEff-0.2.3/maxEff/R/statusPartition.R | 7 ++- maxEff-0.2.3/maxEff/man/add_dummy.Rd | 2 maxEff-0.2.3/maxEff/man/add_dummy_partition.Rd | 2 maxEff-0.2.3/maxEff/man/add_numeric.Rd | 4 - maxEff-0.2.3/maxEff/man/get_cutoff.Rd | 2 maxEff-0.2.3/maxEff/man/labels.add_dummy.Rd | 2 maxEff-0.2.3/maxEff/man/labels.add_numeric.Rd | 2 maxEff-0.2.3/maxEff/man/labels.node1.Rd | 2 maxEff-0.2.3/maxEff/man/maxEff-package.Rd | 8 --- maxEff-0.2.3/maxEff/man/node1.Rd | 14 +++++- maxEff-0.2.3/maxEff/man/predict_add_dummy.Rd | 4 - maxEff-0.2.3/maxEff/man/predict_add_numeric.Rd | 2 maxEff-0.2.3/maxEff/man/print.add_dummy.Rd | 2 maxEff-0.2.3/maxEff/man/sort_by.add_.Rd | 4 - maxEff-0.2.3/maxEff/man/splitd.Rd | 4 - maxEff-0.2.3/maxEff/man/statusPartition.Rd | 7 ++- maxEff-0.2.3/maxEff/man/subset.add_dummy.Rd | 4 - 30 files changed, 109 insertions(+), 109 deletions(-)
Title: Generalized Additive Models with Hyper Column
Description: Generalized additive models with a numeric hyper column. Sign-adjustment based on the correlation of model prediction and a selected slice of the hyper column. Visualization of the integrand surface over the hyper column.
Author: Tingting Zhan [aut, cre] ,
Erjia Cui [ctb]
Maintainer: Tingting Zhan <tingtingzhan@gmail.com>
Diff between hyper.gam versions 0.2.2 dated 2026-02-05 and 0.2.3 dated 2026-03-02
hyper.gam-0.2.2/hyper.gam/build/vignette.rds |only hyper.gam-0.2.2/hyper.gam/inst/doc |only hyper.gam-0.2.2/hyper.gam/vignettes |only hyper.gam-0.2.3/hyper.gam/DESCRIPTION | 18 ++--- hyper.gam-0.2.3/hyper.gam/MD5 | 50 +++++++--------- hyper.gam-0.2.3/hyper.gam/NAMESPACE | 8 -- hyper.gam-0.2.3/hyper.gam/R/0PACKAGE.R | 9 +- hyper.gam-0.2.3/hyper.gam/R/cor_xy.R | 3 hyper.gam-0.2.3/hyper.gam/R/graphics.R | 6 - hyper.gam-0.2.3/hyper.gam/R/hyper_gam.R | 5 - hyper.gam-0.2.3/hyper.gam/R/integrandSurface.R | 5 - hyper.gam-0.2.3/hyper.gam/R/kfoldPredict.R | 4 - hyper.gam-0.2.3/hyper.gam/R/predict.hyper_gam.R | 5 - hyper.gam-0.2.3/hyper.gam/R/scale_do.R | 4 - hyper.gam-0.2.3/hyper.gam/R/sign_adjust.R | 2 hyper.gam-0.2.3/hyper.gam/R/update.R | 3 hyper.gam-0.2.3/hyper.gam/man/cor_xy.Rd | 2 hyper.gam-0.2.3/hyper.gam/man/hyper.gam-package.Rd | 6 - hyper.gam-0.2.3/hyper.gam/man/hyper_gam.Rd | 4 - hyper.gam-0.2.3/hyper.gam/man/hyper_gam_graphics.Rd | 4 - hyper.gam-0.2.3/hyper.gam/man/integrandSurface.Rd | 4 - hyper.gam-0.2.3/hyper.gam/man/kfoldPredict.hyper_gam.Rd | 2 hyper.gam-0.2.3/hyper.gam/man/predict.hyper_gam.Rd | 4 - hyper.gam-0.2.3/hyper.gam/man/scale_do.Rd | 4 - hyper.gam-0.2.3/hyper.gam/man/sign_adjust.Rd | 2 hyper.gam-0.2.3/hyper.gam/man/update.hyper_gam.Rd | 2 26 files changed, 67 insertions(+), 89 deletions(-)
Title: Simulated Grouped Hyper Data Frame
Description: An intuitive interface to simulate (1) superimposed (marked) point patterns with vectorized parameterization of random point pattern and distribution of marks; and (2) grouped hyper data frame based on population parameters and subject-specific random effects.
Author: Tingting Zhan [aut, cre]
Maintainer: Tingting Zhan <tingtingzhan@gmail.com>
Diff between groupedHyperframe.random versions 0.2.2 dated 2026-02-01 and 0.2.3 dated 2026-03-02
groupedHyperframe.random-0.2.2/groupedHyperframe.random/build |only groupedHyperframe.random-0.2.2/groupedHyperframe.random/inst |only groupedHyperframe.random-0.2.2/groupedHyperframe.random/vignettes |only groupedHyperframe.random-0.2.3/groupedHyperframe.random/DESCRIPTION | 11 +-- groupedHyperframe.random-0.2.3/groupedHyperframe.random/MD5 | 26 +++----- groupedHyperframe.random-0.2.3/groupedHyperframe.random/R/grouped_rppp.R | 31 ++++++---- groupedHyperframe.random-0.2.3/groupedHyperframe.random/R/mvrnorm2.R | 13 ++-- groupedHyperframe.random-0.2.3/groupedHyperframe.random/R/rfactor.R | 10 +-- groupedHyperframe.random-0.2.3/groupedHyperframe.random/R/rppp.R | 11 ++- groupedHyperframe.random-0.2.3/groupedHyperframe.random/man/dot-rppp.Rd | 9 +- groupedHyperframe.random-0.2.3/groupedHyperframe.random/man/groupedHyperframe.random-package.Rd | 1 groupedHyperframe.random-0.2.3/groupedHyperframe.random/man/grouped_rppp.Rd | 13 ++-- groupedHyperframe.random-0.2.3/groupedHyperframe.random/man/mvrnorm2.Rd | 11 ++- groupedHyperframe.random-0.2.3/groupedHyperframe.random/man/rfactor.Rd | 8 +- 14 files changed, 81 insertions(+), 63 deletions(-)
More information about groupedHyperframe.random at CRAN
Permanent link
Title: Access Finnish Geospatial Data
Description: Designed to simplify geospatial data access from the Statistics Finland Web Feature Service API <https://geo.stat.fi/geoserver/index.html>, the geofi package offers researchers and analysts a set of tools to obtain and harmonize administrative spatial data for a wide range of applications, from urban planning to environmental research. The package contains annually updated time series of municipality key datasets that can be used for data aggregation and language translations.
Author: Markus Kainu [aut, cre] ,
Joona Lehtomaki [aut] ,
Juuso Parkkinen [ctb] ,
Jani Miettinen [ctb],
Pyry Kantanen [ctb],
Sampo Vesanen [ctb],
Leo Lahti [aut]
Maintainer: Markus Kainu <markus.kainu@kapsi.fi>
Diff between geofi versions 1.1.0 dated 2025-04-29 and 1.2.0 dated 2026-03-02
DESCRIPTION | 19 +- MD5 | 106 ++++++------ NEWS.md | 5 R/check_api_access.R | 2 R/data.R | 240 ++++++++++++++++++++--------- R/get_municipalities.R | 6 R/get_municipality_pop.R | 2 R/get_population_grid.R | 2 R/get_statistical_grid.R | 4 R/get_zipcodes.R | 2 R/wfs_api.R | 28 +-- README.md | 14 - build/vignette.rds |binary data/municipality_key.rda |binary data/municipality_key_2013.rda |binary data/municipality_key_2014.rda |binary data/municipality_key_2015.rda |binary data/municipality_key_2016.rda |binary data/municipality_key_2017.rda |binary data/municipality_key_2018.rda |binary data/municipality_key_2019.rda |binary data/municipality_key_2020.rda |binary data/municipality_key_2021.rda |binary data/municipality_key_2022.rda |binary data/municipality_key_2023.rda |binary data/municipality_key_2024.rda |binary data/municipality_key_2025.rda |binary data/municipality_key_2026.rda |only inst/doc/geofi_datasets.Rmd | 8 inst/doc/geofi_datasets.html | 80 ++++----- inst/doc/geofi_geocoding.html | 5 inst/doc/geofi_joining_attribute_data.html | 9 - inst/doc/geofi_making_maps.html | 41 ++-- inst/doc/geofi_nls_ogc.Rmd | 4 inst/doc/geofi_nls_ogc.html | 14 - inst/doc/geofi_spatial_analysis.html | 35 ++-- inst/doc/geofi_statfi_ogc.R | 57 +++--- inst/doc/geofi_statfi_ogc.Rmd | 77 +++++---- inst/doc/geofi_statfi_ogc.html | 104 ++++++------ man/figures/readme_map-1.png |binary man/get_municipalities.Rd | 6 man/get_municipality_pop.Rd | 2 man/get_population_grid.Rd | 4 man/get_statistical_grid.Rd | 2 man/get_zipcodes.Rd | 2 man/municipality_key.Rd | 12 + man/municipality_key_2020.Rd | 6 man/municipality_key_2022.Rd | 4 man/municipality_key_2025.Rd | 14 - man/municipality_key_2026.Rd |only man/wfs_api.Rd | 8 tests/testthat/test-01-wfs.R | 2 vignettes/geofi_datasets.Rmd | 8 vignettes/geofi_nls_ogc.Rmd | 4 vignettes/geofi_statfi_ogc.Rmd | 77 +++++---- 55 files changed, 592 insertions(+), 423 deletions(-)
Title: Visualization and Analysis of Statistical Measures of Confidence
Description: Enables: (1) plotting two-dimensional confidence regions, (2) coverage analysis
of confidence region simulations, (3) calculating confidence intervals and the associated
actual coverage for binomial proportions, (4) calculating the support values and the
probability mass function of the Kaplan-Meier product-limit estimator, and (5) plotting
the actual coverage function associated with a confidence interval for the survivor
function from a randomly right-censored data set. Each is given in greater detail next.
(1) Plots the two-dimensional confidence region for probability distribution parameters
(supported distribution suffixes: cauchy, gamma, invgauss, logis, llogis, lnorm, norm, unif,
weibull) corresponding to a user-given complete or right-censored dataset and level of
significance. The crplot() algorithm plots more points in areas of greater curvature to
ensure a smooth appearance throughout the confidence region boundary. An alternative
heuristic plots a specified number of poin [...truncated...]
Author: Christopher Weld [aut, cre] ,
Kexin Feng [aut],
Hayeon Park [aut],
Yuxin Qin [aut],
Xingyu Wang [aut],
Heather Krehbiel [aut],
Lawrence Leemis [aut],
Yuan Chang [ctb],
Brock Crook [ctb],
Chris Kuebler [ctb],
Andrew Loh [ctb],
Xin Zhang [ctb]
Maintainer: Christopher Weld <ceweld241@gmail.com>
Diff between conf versions 1.9.2 dated 2025-08-27 and 1.9.3 dated 2026-03-02
DESCRIPTION | 10 +++++----- MD5 | 34 +++++++++++++++++----------------- R/conf-package.R | 2 +- inst/CITATION | 4 ++-- inst/doc/coversim.html | 4 ++-- inst/doc/crplot.html | 4 ++-- inst/doc/crplot_advanced.html | 4 ++-- inst/doc/km.outcomes.html | 4 ++-- inst/doc/km.pmf.html | 4 ++-- inst/doc/km.support.html | 4 ++-- inst/doc/km.surv.html | 4 ++-- man/binomTestMSE.Rd | 2 +- man/conf.Rd | 2 +- man/km.coverage.Rd | 2 +- man/km.outcomes.Rd | 2 +- man/km.pmf.Rd | 2 +- man/km.support.Rd | 2 +- man/km.surv.Rd | 2 +- 18 files changed, 46 insertions(+), 46 deletions(-)
Title: Model and Analyse Interval Data
Description: Implements methodologies for modelling interval data by Normal
and Skew-Normal distributions, considering appropriate parameterizations of
the variance-covariance matrix that takes into account the intrinsic nature of
interval data, and lead to four different possible configuration structures.
The Skew-Normal parameters can be estimated by maximum likelihood, while Normal
parameters may be estimated by maximum likelihood or robust trimmed maximum
likelihood methods.
Author: Pedro Duarte Silva [aut, cre],
Paula Brito [aut]
Maintainer: Pedro Duarte Silva <psilva@ucp.pt>
Diff between MAINT.Data versions 2.7.4 dated 2026-01-14 and 2.8.0 dated 2026-03-02
CHANGELOG | 18 DESCRIPTION | 8 MD5 | 24 - R/AgrMcDt.R | 6 R/ClasGenMetDef.R | 7 R/IData.R | 844 ++++++++++++++++++++++++---------------------- data/Abalone.RData |binary data/nycflights.RData |binary man/AgrMcDt.Rd | 6 man/IData-class.Rd | 1 man/IData.Rd | 20 - man/MAINT.Data-package.Rd | 4 src/msnCP_dev.h | 2 13 files changed, 517 insertions(+), 423 deletions(-)
Title: Dynamic Programming Based Gaussian Mixture Modelling Tool for 1D
and 2D Data
Description: Gaussian mixture modeling of one- and two-dimensional data, provided in original or binned form, with an option to estimate the number of model components. The method uses Gaussian Mixture Models (GMM) with initial parameters determined by a dynamic programming algorithm, leading to stable and reproducible model fitting. For more details see Zyla, J., Szumala, K., Polanski, A., Polanska, J., & Marczyk, M. (2026) <doi:10.1016/j.jocs.2026.102811>.
Author: Michal Marczyk [aut, ctb],
Kamila Szumala [aut, cre],
Joanna Zyla [aut, ctb]
Maintainer: Kamila Szumala <kamila.szumala@polsl.pl>
Diff between dpGMM versions 0.2.2 dated 2026-01-15 and 1.0.0 dated 2026-03-02
DESCRIPTION | 8 ++++---- MD5 | 2 +- 2 files changed, 5 insertions(+), 5 deletions(-)
Title: Phase I/II Adaptive Dose-Finding Design for MTA
Description: Phase I/II adaptive dose-finding design for single-agent
Molecularly Targeted Agent (MTA), according to the paper "Phase
I/II Dose-Finding Design for Molecularly Targeted Agent: Plateau
Determination using Adaptive Randomization", Riviere Marie-Karelle et
al. (2016) <doi:10.1177/0962280216631763>.
Author: Marie-Karelle Riviere [aut],
Jacques-Henri Jourdan [aut, cre]
Maintainer: Jacques-Henri Jourdan <jacques-henri.jourdan@cnrs.fr>
Diff between dfmta versions 1.7-6 dated 2024-09-30 and 1.7-8 dated 2026-03-02
DESCRIPTION | 8 MD5 | 8 build/partial.rdb |binary configure | 451 ++++++++++++++++++++++++++++-------------------------- src/dfmta.cpp | 126 +++++++-------- 5 files changed, 302 insertions(+), 291 deletions(-)
Title: Risk Assessments for Ecosystems or Ecosystem Components
Description: Implementation of a modular framework for ecosystem risk assessments,
combining existing risk assessment approaches tailored to semi-quantitative and
quantitative analyses.
Author: Helene Gutte [aut, cre, cph] ,
Saskia A. Otto [aut]
Maintainer: Helene Gutte <helenegutte96@gmail.com>
Diff between ecorisk versions 0.2.1 dated 2025-11-07 and 0.3.1 dated 2026-03-02
DESCRIPTION | 19 MD5 | 31 + NAMESPACE | 1 NEWS.md | 11 R/ecorisk-package.R |only R/model_sensitivity.R | 5 R/plot_diagnostic_sensitivity.R |only R/plot_heatmap.R | 26 + R/plot_radar.R | 23 - inst/doc/ecorisk.R | 8 inst/doc/ecorisk.Rmd | 15 inst/doc/ecorisk.html | 593 ++++++++++++++++--------------- man/ecorisk-package.Rd |only man/model_sensitivity.Rd | 3 man/plot_diagnostic_sensitivity.Rd |only tests/testthat/Rplots.pdf |only tests/testthat/_snaps |only tests/testthat/test-plotting_functions.R |only vignettes/ecorisk.Rmd | 15 19 files changed, 440 insertions(+), 310 deletions(-)
Title: Toolkit for Regression Analysis of Kazakhstan Banking Sector
Data
Description: Tool is created for regression, prediction and forecast analysis of macroeconomic and credit data.
The package includes functions from existing R packages adapted for banking sector of Kazakhstan.
The purpose of the package is to optimize statistical functions for easier interpretation for bank analysts and non-statisticians.
Author: Timur Abilkassymov [aut],
Shyngys Shuneyev [aut],
Alua Makhmetova [aut],
Sultan Zhaparov [aut, cre]
Maintainer: Sultan Zhaparov <saldau.sultan@gmail.com>
This is a re-admission after prior archival of version 0.3.7 dated 2025-08-28
Diff between AFR versions 0.3.7 dated 2025-08-28 and 0.3.8 dated 2026-03-02
DESCRIPTION | 15 +++++++-------- MD5 | 2 +- 2 files changed, 8 insertions(+), 9 deletions(-)
Title: Fast, Robust, and Outlier Resistant Hierarchical Clustering
Description: Implements a basic version of the hierarchical clustering algorithm
'Genie' which links two point groups in such a way that
an inequity measure (namely, the Gini index) of the cluster sizes
does not significantly increase above a given threshold.
This method most often outperforms many other data segmentation approaches
in terms of clustering quality as tested on a wide range of benchmark
datasets. At the same time, Genie retains the high speed of the single
linkage approach, therefore it is also suitable for analysing larger data sets.
For more details see (Gagolewski et al. 2016 <DOI:10.1016/j.ins.2016.05.003>).
For a faster and more feature-rich implementation, see the 'genieclust' package
(Gagolewski, 2021 <DOI:10.1016/j.softx.2021.100722>).
Author: Marek Gagolewski [aut, cre, cph] ,
Maciej Bartoszuk [aut] ,
Anna Cena [aut]
Maintainer: Marek Gagolewski <marek@gagolewski.com>
Diff between genie versions 1.0.6 dated 2025-12-01 and 1.0.7 dated 2026-03-02
genie-1.0.6/genie/src/hclust2_nnbased_gini.h |only genie-1.0.6/genie/src/hclust2_nnbased_single.cpp |only genie-1.0.6/genie/src/hclust2_nnbased_single.h |only genie-1.0.6/genie/src/hclust2_vptree_gini.h |only genie-1.0.6/genie/src/hclust2_vptree_single.cpp |only genie-1.0.6/genie/src/hclust2_vptree_single.h |only genie-1.0.6/genie/src/init.cpp |only genie-1.0.6/genie/tests |only genie-1.0.7/genie/DESCRIPTION | 18 ++++++++---------- genie-1.0.7/genie/MD5 | 23 +++++++---------------- genie-1.0.7/genie/NEWS | 5 +++++ genie-1.0.7/genie/src/defs.h | 4 ++-- genie-1.0.7/genie/src/hclust2_common.cpp | 22 +++++++++++----------- genie-1.0.7/genie/src/hclust2_common.h | 4 ++-- genie-1.0.7/genie/src/hclust2_mstbased_gini.cpp | 21 ++------------------- genie-1.0.7/genie/src/hclust2_rcpp_gini.cpp | 1 - 16 files changed, 37 insertions(+), 61 deletions(-)
Title: Phase I/II Adaptive Dose-Finding Design for Combination Studies
Description: Phase I/II adaptive dose-finding design for combination
studies where toxicity rates are supposed to increase with both agents.
Author: Marie-Karelle Riviere [aut],
Jacques-Henri Jourdan [aut, cre]
Maintainer: Jacques-Henri Jourdan <jacques-henri.jourdan@cnrs.fr>
Diff between dfcomb versions 3.1-4 dated 2024-09-30 and 3.1-5 dated 2026-03-02
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- build/partial.rdb |binary src/logistic.cpp | 18 +++++++----------- 4 files changed, 14 insertions(+), 18 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-03-25 1.0.0-1.1.2
2018-08-06 0.4.1
2018-07-19 0.4
2015-04-04 0.2.1
2015-03-26 0.2
2014-11-26 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-05-24 0.1.4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-07-07 3.0.0
2025-06-15 2.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-08-21 0.29.11
2015-05-05 0.28
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-10-01 1.2.3
2025-01-15 1.2.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-12-09 1.0.2
2019-01-24 1.0.0
2017-10-18 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-02-16 0.1.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-03-31 2.6.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-10-24 0.8
2016-09-06 0.7
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-09-09 0.0.3
2023-02-10 0.0.2
2023-01-25 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-02-05 1.0.1
2024-07-04 1.0
Title: Compute, Handle and Plot Incidence of Dated Events
Description: Provides functions and classes to compute, handle and visualise
incidence from dated events for a defined time interval. Dates can be
provided in various standard formats. The class 'incidence2' is used to store
computed incidence and can be easily manipulated, subsetted, and plotted.
Author: Tim Taylor [aut, cre] ,
Thibaut Jombart [ctb]
Maintainer: Tim Taylor <tim.taylor@hiddenelephants.co.uk>
Diff between incidence2 versions 2.6.3 dated 2025-06-04 and 2.6.4 dated 2026-03-02
incidence2-2.6.3/incidence2/README.md |only incidence2-2.6.4/incidence2/DESCRIPTION | 8 incidence2-2.6.4/incidence2/MD5 | 58 +++--- incidence2-2.6.4/incidence2/NEWS.md | 4 incidence2-2.6.4/incidence2/R/defunct.R | 2 incidence2-2.6.4/incidence2/R/dplyr.R | 2 incidence2-2.6.4/incidence2/R/estimate_peak.R | 3 incidence2-2.6.4/incidence2/R/incidence.R | 57 +++--- incidence2-2.6.4/incidence2/R/plot.R | 20 -- incidence2-2.6.4/incidence2/R/regroup.R | 6 incidence2-2.6.4/incidence2/R/split.R | 4 incidence2-2.6.4/incidence2/R/summary.R | 2 incidence2-2.6.4/incidence2/R/utils.R | 9 - incidence2-2.6.4/incidence2/build/vignette.rds |binary incidence2-2.6.4/incidence2/inst/doc/incidence2.R | 30 +-- incidence2-2.6.4/incidence2/inst/doc/incidence2.Rmd | 43 ++--- incidence2-2.6.4/incidence2/inst/doc/incidence2.html | 84 ++++++---- incidence2-2.6.4/incidence2/man/as.Rd | 2 incidence2-2.6.4/incidence2/man/dplyr-verbs.Rd | 2 incidence2-2.6.4/incidence2/man/split.incidence2.Rd | 3 incidence2-2.6.4/incidence2/tests/testthat/_snaps/plot/influenza_plot.png |binary incidence2-2.6.4/incidence2/tests/testthat/test-bootstrap.R | 4 incidence2-2.6.4/incidence2/tests/testthat/test-complete_dates.R | 8 incidence2-2.6.4/incidence2/tests/testthat/test-cumulate.R | 5 incidence2-2.6.4/incidence2/tests/testthat/test-incidence.R | 49 ++--- incidence2-2.6.4/incidence2/tests/testthat/test-incidence_.R | 44 ++--- incidence2-2.6.4/incidence2/tests/testthat/test-keep.R | 5 incidence2-2.6.4/incidence2/tests/testthat/test-plot.R | 2 incidence2-2.6.4/incidence2/tests/testthat/test-subsetting_and_dplyr.R | 19 -- incidence2-2.6.4/incidence2/vignettes/assets |only incidence2-2.6.4/incidence2/vignettes/incidence2.Rmd | 43 ++--- 31 files changed, 264 insertions(+), 254 deletions(-)
Title: Bayesian Networks
Description: Probability propagation in Bayesian networks, also known as graphical independence networks. Documentation
of the package is provided in vignettes included in the package and in
the paper by Højsgaard (2012, <doi:10.18637/jss.v046.i10>).
See 'citation("gRain")' for details.
Author: Soeren Hoejsgaard [aut, cre]
Maintainer: Soeren Hoejsgaard <sorenh@math.aau.dk>
Diff between gRain versions 1.4.5 dated 2024-10-17 and 1.4.6 dated 2026-03-02
gRain-1.4.5/gRain/inst/doc/grain.pdf |only gRain-1.4.5/gRain/vignettes/grain.html |only gRain-1.4.6/gRain/DESCRIPTION | 12 +- gRain-1.4.6/gRain/MD5 | 41 ++++------ gRain-1.4.6/gRain/NAMESPACE | 2 gRain-1.4.6/gRain/NEWS | 6 + gRain-1.4.6/gRain/R/cpt_pot_gather.R | 3 gRain-1.4.6/gRain/R/repeat_pattern.R | 27 ------ gRain-1.4.6/gRain/build/vignette.rds |binary gRain-1.4.6/gRain/demo/asia.R | 14 ++- gRain-1.4.6/gRain/inst/doc/grain.html |only gRain-1.4.6/gRain/inst/doc/grain.rmd | 1 gRain-1.4.6/gRain/src/Makevars | 4 gRain-1.4.6/gRain/src/Makevars.win | 3 gRain-1.4.6/gRain/vignettes/figures/grain-bn1-1.png |binary gRain-1.4.6/gRain/vignettes/figures/grain-bn2-1.png |binary gRain-1.4.6/gRain/vignettes/figures/grain-chest-LS-1.png |binary gRain-1.4.6/gRain/vignettes/figures/grain-unnamed-chunk-35-1.png |binary gRain-1.4.6/gRain/vignettes/figures/grain-unnamed-chunk-36-1.png |binary gRain-1.4.6/gRain/vignettes/figures/grain-unnamed-chunk-39-1.png |binary gRain-1.4.6/gRain/vignettes/figures/grain-unnamed-chunk-53-1.png |binary gRain-1.4.6/gRain/vignettes/grain.bib | 4 gRain-1.4.6/gRain/vignettes/grain.rmd | 1 23 files changed, 54 insertions(+), 64 deletions(-)
Title: Bayesian Estimation of (Sparse) Latent Factor Stochastic
Volatility Models
Description: Markov chain Monte Carlo (MCMC) sampler for fully Bayesian estimation of latent factor stochastic volatility models with interweaving <doi:10.1080/10618600.2017.1322091>. Sparsity can be achieved through the usage of Normal-Gamma priors on the factor loading matrix <doi:10.1016/j.jeconom.2018.11.007>.
Author: Gregor Kastner [aut, cre] ,
Darjus Hosszejni [ctb] ,
Luis Gruber [ctb]
Maintainer: Gregor Kastner <gregor.kastner@aau.at>
Diff between factorstochvol versions 1.1.0 dated 2023-11-24 and 1.1.1 dated 2026-03-02
DESCRIPTION | 16 - MD5 | 64 +++--- NEWS | 7 R/factorstochvol-package.R | 3 build/partial.rdb |binary build/vignette.rds |binary inst/doc/paper.Rtex | 28 +- inst/doc/paper.pdf |binary man/factorstochvol-package.Rd | 1 man/predcond.Rd | 2 man/predcor.Rd | 2 man/predcov.Rd | 2 man/predh.Rd | 2 man/predprecWB.Rd | 4 src/sampler.cpp | 12 - src/update_fsv.cpp | 12 - vignettes/Figures/jss3813-comtimeplot-1.pdf |binary vignettes/Figures/jss3813-corimageplot-1.pdf |binary vignettes/Figures/jss3813-cortimeplot-1.pdf | 282 +++++++++++++-------------- vignettes/Figures/jss3813-evdiag-1.pdf |binary vignettes/Figures/jss3813-fsvprepdata-1.pdf |binary vignettes/Figures/jss3813-loadplot2-1.pdf |binary vignettes/Figures/jss3813-loadplot2-2.pdf |binary vignettes/Figures/jss3813-logdetcovn-1.pdf |binary vignettes/Figures/jss3813-plotsvlpred-1.pdf |binary vignettes/Figures/jss3813-preddist-1.pdf |binary vignettes/Figures/jss3813-svlbetaplot-1.pdf |binary vignettes/Figures/jss3813-svlplot-1.pdf |binary vignettes/Figures/jss3813-varplot-1.pdf | 237 +++++++++++----------- vignettes/Figures/jss3813-varplot2-1.pdf |binary vignettes/Figures/jss3813-voltimeplot-1.pdf |binary vignettes/paper.Rtex | 28 +- vignettes/ref.bib | 6 33 files changed, 355 insertions(+), 353 deletions(-)
More information about factorstochvol at CRAN
Permanent link
Title: Tracer from R
Description: 'BEAST2' (<https://www.beast2.org>) is a widely used
Bayesian phylogenetic tool, that uses DNA/RNA/protein data
and many model priors to create a posterior of jointly estimated
phylogenies and parameters.
'Tracer' (<https://github.com/beast-dev/tracer/>) is a GUI tool
to parse and analyze the files generated by 'BEAST2'.
This package provides a way to parse and analyze 'BEAST2' input
files without active user input, but using
R function calls instead.
Author: Richel J.C. Bilderbeek [aut, cre] ,
Joelle Barido-Sottani [rev] ,
Roberto Villegas-Diaz [ctb],
David Winter [rev]
Maintainer: Richel J.C. Bilderbeek <rjcbilderbeek@gmail.com>
Diff between tracerer versions 2.2.3 dated 2023-09-27 and 2.2.4 dated 2026-03-02
DESCRIPTION | 26 +++---- MD5 | 130 ++++++++++++++++++------------------- R/calc_act.R | 4 - R/calc_ess.R | 1 R/calc_esses.R | 7 + R/calc_geom_mean.R | 1 R/calc_hpd_interval.R | 1 R/calc_mode.R | 1 R/calc_stderr_mean.R | 1 R/calc_summary_stats.R | 33 +++++---- R/check_trace.R | 1 R/count_trees_in_file.R | 7 + R/cs_std_dev.R | 3 R/default_params_doc.R | 5 + R/extract_operators_lines.R | 9 +- R/get_path.R | 1 R/get_paths.R | 1 R/is_posterior.R | 3 R/is_trees_file.R | 19 ++--- R/is_trees_posterior.R | 1 R/parse_beast_log.R | 1 R/parse_beast_output_files.R | 10 +- R/parse_beast_posterior.R | 10 +- R/parse_beast_state.R | 5 - R/parse_beast_tracelog_file.R | 1 R/parse_beast_trees.R | 26 +++---- R/remove_burn_in.R | 1 R/remove_burn_ins.R | 1 R/save_beast_estimates.R | 5 - R/save_beast_trees.R | 8 +- R/tracerer-package.R | 18 ++--- build/vignette.rds |binary inst/CITATION | 2 inst/doc/demo.html | 12 +-- man/calc_act.Rd | 1 man/calc_act_r.Rd | 1 man/calc_ess.Rd | 1 man/calc_esses.Rd | 1 man/calc_geom_mean.Rd | 1 man/calc_hpd_interval.Rd | 1 man/calc_mode.Rd | 1 man/calc_stderr_mean.Rd | 1 man/calc_summary_stats.Rd | 29 ++++---- man/calc_summary_stats_trace.Rd | 5 - man/calc_summary_stats_traces.Rd | 5 - man/check_trace.Rd | 1 man/count_trees_in_file.Rd | 1 man/cs_std_dev.Rd | 5 - man/default_params_doc.Rd | 6 - man/extract_operators_lines.Rd | 1 man/get_tracerer_path.Rd | 1 man/get_tracerer_paths.Rd | 1 man/is_posterior.Rd | 1 man/is_trees_file.Rd | 1 man/is_trees_posterior.Rd | 1 man/parse_beast_log.Rd | 1 man/parse_beast_output_files.Rd | 10 +- man/parse_beast_posterior.Rd | 6 - man/parse_beast_state_operators.Rd | 1 man/parse_beast_tracelog_file.Rd | 1 man/parse_beast_trees.Rd | 1 man/remove_burn_in.Rd | 1 man/remove_burn_ins.Rd | 1 man/save_beast_estimates.Rd | 5 - man/save_beast_trees.Rd | 5 - man/tracerer-package.Rd | 18 ++--- 66 files changed, 264 insertions(+), 207 deletions(-)
Title: Calculation of IBD Probabilities
Description: For biparental, three and four-way crosses Identity by Descent
(IBD) probabilities can be calculated using Hidden Markov Models and
inheritance vectors following Lander and Green
(<https://www.jstor.org/stable/29713>) and Huang
(<doi:10.1073/pnas.1100465108>). One of a series of statistical genetic
packages for streamlining the analysis of typical plant breeding experiments
developed by Biometris.
Author: Martin Boer [aut] ,
Bart-Jan van Rossum [aut, cre] ,
Wenhao Li [ctb] ,
Johannes Kruisselbrink [ctb]
Maintainer: Bart-Jan van Rossum <bart-jan.vanrossum@wur.nl>
Diff between statgenIBD versions 1.0.9 dated 2025-07-01 and 1.0.10 dated 2026-03-02
DESCRIPTION | 10 +- MD5 | 16 +-- NEWS.md | 4 build/partial.rdb |binary build/vignette.rds |binary inst/doc/IBDCalculations.html | 11 +- inst/doc/IBDFileFormat.html | 9 + man/calcIBD.Rd | 210 +++++++++++++++++++++--------------------- src/calcIBD.cpp | 2 9 files changed, 134 insertions(+), 128 deletions(-)
Title: Tile Grid Maps for East Caucasian Languages
Description: Generates tile maps for the East Caucasian language family, inspired by the Typological Atlas of the Languages of Daghestan (TALD, <https://lingconlab.ru/tald/>). It leverages 'ggplot2' to create visually informative maps, displaying rectangles for each language and allowing for color-coding based on linguistic features. The package includes a built-in dataset of 56 languages and the template for their distribution and provides flexibility to customize the tile map's appearance. The default template can be modified via the ability to hide or rename languages. It's designed to be used with external data tables containing language information and features, offering a tool for visualizing the geographic distribution and linguistic characteristics of East Caucasian languages.
Author: George Moroz [aut, cre]
Maintainer: George Moroz <agricolamz@gmail.com>
Diff between RCaucTile versions 1.0.3 dated 2026-01-16 and 1.0.4 dated 2026-03-02
DESCRIPTION | 8 +++++--- MD5 | 12 ++++++------ NEWS | 5 +++++ R/ec_tile_map.R | 19 ++++++++++--------- README.md | 18 ++++++++++++++++++ data/ec_languages.rda |binary inst/CITATION | 4 +++- 7 files changed, 47 insertions(+), 19 deletions(-)
Title: Create and Maintain a Relational Database of Data from
PubMed/MEDLINE
Description: Provides a simple interface for extracting various elements from
the publicly available PubMed XML files, incorporating PubMed's regular
updates, and combining the data with the NIH Open Citation Collection. See
Schoenbachler and Hughey (2021) <doi:10.7717/peerj.11071>.
Author: Jake Hughey [aut, cre],
Josh Schoenbachler [aut],
Elliot Outland [aut]
Maintainer: Jake Hughey <jakejhughey@gmail.com>
Diff between pmparser versions 1.0.24 dated 2026-02-05 and 1.0.25 dated 2026-03-02
pmparser-1.0.24/pmparser/tests/testthat/pubmed_sample/open_citation_collection.csv |only pmparser-1.0.25/pmparser/DESCRIPTION | 6 ++--- pmparser-1.0.25/pmparser/MD5 | 12 +++++----- pmparser-1.0.25/pmparser/NEWS.md | 3 ++ pmparser-1.0.25/pmparser/R/get_citation.R | 4 +-- pmparser-1.0.25/pmparser/man/getCitation.Rd | 2 - pmparser-1.0.25/pmparser/tests/testthat/pubmed_sample/open_citation_collection.zip |only pmparser-1.0.25/pmparser/tests/testthat/test_get_citation.R | 6 +++-- 8 files changed, 19 insertions(+), 14 deletions(-)
Title: High-Performance Matrix Market File Operations
Description: An interface to the 'fast_matrix_market' 'C++' library, this package offers efficient read and write operations for Matrix Market files in R. It supports both sparse and dense matrix formats. Peer-reviewed at 'rOpenSci' (<https://github.com/ropensci/software-review/issues/606>).
Author: Rohit Goswami [aut, cre] ,
Ildiko Czeller [rev] ,
Adam Lugowski [ctb]
Maintainer: Rohit Goswami <rgoswami@ieee.org>
This is a re-admission after prior archival of version 1.2.5 dated 2023-11-03
Diff between fastMatMR versions 1.2.5 dated 2023-11-03 and 1.2.7 dated 2026-03-02
fastMatMR-1.2.5/fastMatMR/inst/doc/fmm_read_bench.R |only fastMatMR-1.2.5/fastMatMR/inst/doc/fmm_write_bench.R |only fastMatMR-1.2.5/fastMatMR/inst/include |only fastMatMR-1.2.7/fastMatMR/DESCRIPTION | 22 - fastMatMR-1.2.7/fastMatMR/MD5 | 68 ++--- fastMatMR-1.2.7/fastMatMR/NAMESPACE | 4 fastMatMR-1.2.7/fastMatMR/NEWS.md | 23 + fastMatMR-1.2.7/fastMatMR/R/fastMatMR-package.R | 174 ++++++++++++- fastMatMR-1.2.7/fastMatMR/README.md | 52 +++- fastMatMR-1.2.7/fastMatMR/build/vignette.rds |binary fastMatMR-1.2.7/fastMatMR/inst/doc/fastMatMR.R | 20 - fastMatMR-1.2.7/fastMatMR/inst/doc/fastMatMR.html | 7 fastMatMR-1.2.7/fastMatMR/inst/doc/fmm_read_bench.html | 7 fastMatMR-1.2.7/fastMatMR/inst/doc/fmm_write_bench.html | 7 fastMatMR-1.2.7/fastMatMR/man/SparseM_to_fmm.Rd |only fastMatMR-1.2.7/fastMatMR/man/fmm_to_SparseM.Rd |only fastMatMR-1.2.7/fastMatMR/man/fmm_to_spam.Rd |only fastMatMR-1.2.7/fastMatMR/man/spam_to_fmm.Rd |only fastMatMR-1.2.7/fastMatMR/src/Makevars | 2 fastMatMR-1.2.7/fastMatMR/src/fast_matrix_market |only fastMatMR-1.2.7/fastMatMR/src/from_file.cpp | 12 fastMatMR-1.2.7/fastMatMR/src/to_file.cpp | 10 fastMatMR-1.2.7/fastMatMR/tests/testthat/test-read_fmm.R | 151 +++++++++++ fastMatMR-1.2.7/fastMatMR/tests/testthat/test-write_fmm.R | 180 ++++++++++++++ 24 files changed, 648 insertions(+), 91 deletions(-)
Title: Bayesian Ammi Model for Continuous Data with or without Additive
and Dominance Effect
Description: Flexible multi-environment trials analysis via MCMC method for Additive Main Effects and Multiplicative Interaction Model (AMMI) for continuous data.
Biplot with the averages and regions of confidence can be generated. The chains run in parallel on Linux systems and run serially on Windows.
Author: Fabio M. Correa [aut, cre] ,
Luciano A. Oliveira [aut],
Carlos P. Silva [aut],
Cristian T. E. Mendes [aut],
Alessandra Q. Silva [aut],
Joel J. Nuvunga [aut],
Larissa C. V. Boas [aut],
Marcio Balestre [ths],
Julio S. S. Bueno-Filho [ths]
Maintainer: Fabio M. Correa <fmcron@protonmail.com>
Diff between ammiBayes versions 1.0-3 dated 2025-04-19 and 2.1-1 dated 2026-03-02
ammiBayes-1.0-3/ammiBayes/R/sysdata.rda |only ammiBayes-2.1-1/ammiBayes/ChangeLog | 16 ammiBayes-2.1-1/ammiBayes/DESCRIPTION | 28 ammiBayes-2.1-1/ammiBayes/MD5 | 30 ammiBayes-2.1-1/ammiBayes/NAMESPACE | 5 ammiBayes-2.1-1/ammiBayes/R/graphics.R | 111 + ammiBayes-2.1-1/ammiBayes/R/interaction.R |only ammiBayes-2.1-1/ammiBayes/R/main.R | 1108 ++++++++++++++++++- ammiBayes-2.1-1/ammiBayes/R/output.R | 8 ammiBayes-2.1-1/ammiBayes/build/vignette.rds |binary ammiBayes-2.1-1/ammiBayes/data/ammiDominance.RData |only ammiBayes-2.1-1/ammiBayes/inst/CITATION | 3 ammiBayes-2.1-1/ammiBayes/inst/doc/vignette.pdf |binary ammiBayes-2.1-1/ammiBayes/man/AMMI.Rd |only ammiBayes-2.1-1/ammiBayes/man/AMMIGBlup.Rd |only ammiBayes-2.1-1/ammiBayes/man/AMMIGBlupD.Rd |only ammiBayes-2.1-1/ammiBayes/man/ammiBayes.Rd | 15 ammiBayes-2.1-1/ammiBayes/man/ammiBayes.conf.plot.Rd | 9 ammiBayes-2.1-1/ammiBayes/man/ammiDominance.Rd |only ammiBayes-2.1-1/ammiBayes/man/detect.interaction.Rd |only 20 files changed, 1244 insertions(+), 89 deletions(-)
Title: Treatment Effect Estimation for Time-to-Event Data with
Intercurrent Events
Description: Analysis of treatment effects in clinical trials with time-to-event outcomes is complicated by intercurrent events. This package implements methods for estimating and inferring the cumulative incidence functions for time-to-event (TTE) outcomes with intercurrent events (ICE) under the five strategies outlined in the ICH E9 (R1) addendum, see Deng (2025) <doi:10.1002/sim.70091>. This package can be used for analyzing data from both randomized controlled trials and observational studies. In general, the data involve a primary outcome event and, potentially, an intercurrent event. Two data structures are allowed: competing risks, where only the time to the first event is recorded, and semicompeting risks, where the times to both the primary outcome event and intercurrent event (or censoring) are recorded. For estimation methods, users can choose nonparametric estimation (which does not use covariates) and semiparametrically efficient estimation.
Author: Yuhao Deng [aut],
Yi Zhou [cre]
Maintainer: Yi Zhou <yzhou@pku.edu.cn>
Diff between tteICE versions 1.1.2 dated 2026-02-28 and 1.1.3 dated 2026-03-02
tteICE-1.1.2/tteICE/R/basehaz_tteICE.R |only tteICE-1.1.2/tteICE/man/basehaz.tteICE.Rd |only tteICE-1.1.3/tteICE/DESCRIPTION | 6 +++--- tteICE-1.1.3/tteICE/MD5 | 6 ++---- tteICE-1.1.3/tteICE/inst/tteICE.pdf |binary 5 files changed, 5 insertions(+), 7 deletions(-)
Title: Conduct Response Item Network (ResIN) Analysis with Social
Response Data
Description: Contains various tools to perform and visualize Response Item Networks ('ResIN's'). 'ResIN' dummy-codes ordered and qualitative response choices from (survey) data, calculates pairwise associations and maps the location of each item response as a node in a force-directed network. Please refer to <https://www.resinmethod.net/> for more details.
Author: Philip Warncke [cre, aut],
Dino Carpentras [aut],
Adrian Lueders [aut]
Maintainer: Philip Warncke <philip.warncke@ul.ie>
Diff between ResIN versions 2.2.1 dated 2025-07-30 and 2.3.0 dated 2026-03-02
ResIN-2.2.1/ResIN/man/autoplot.ResIN.Rd |only ResIN-2.3.0/ResIN/DESCRIPTION | 26 ResIN-2.3.0/ResIN/MD5 | 73 - ResIN-2.3.0/ResIN/NAMESPACE | 68 + ResIN-2.3.0/ResIN/NEWS.md |only ResIN-2.3.0/ResIN/R/Boostrap_example.R | 4 ResIN-2.3.0/ResIN/R/ResIN.R | 770 +++++++++++++--- ResIN-2.3.0/ResIN/R/ResIN_boots_draws.R |only ResIN-2.3.0/ResIN/R/ResIN_boots_execute.R | 189 +++- ResIN-2.3.0/ResIN/R/ResIN_boots_executed.R |only ResIN-2.3.0/ResIN/R/ResIN_boots_extract.R | 294 +++++- ResIN-2.3.0/ResIN/R/ResIN_boots_prepare.R | 111 +- ResIN-2.3.0/ResIN/R/ResIN_boots_prepped.R |only ResIN-2.3.0/ResIN/R/ResIN_to_gephi.R | 79 - ResIN-2.3.0/ResIN/R/ResIN_to_igraph.R | 28 ResIN-2.3.0/ResIN/R/ResIN_to_qgraph.R | 44 ResIN-2.3.0/ResIN/R/coercion-generics.R |only ResIN-2.3.0/ResIN/R/lik_data.R | 2 ResIN-2.3.0/ResIN/R/methods-ResIN.R | 1080 ++++++++++++++++++++++- ResIN-2.3.0/ResIN/R/reexports.R |only ResIN-2.3.0/ResIN/build/vignette.rds |binary ResIN-2.3.0/ResIN/inst/doc/ResIN-VIGNETTE.R | 7 ResIN-2.3.0/ResIN/inst/doc/ResIN-VIGNETTE.Rmd | 23 ResIN-2.3.0/ResIN/inst/doc/ResIN-VIGNETTE.html | 100 +- ResIN-2.3.0/ResIN/man/Bootstrap_example.Rd | 6 ResIN-2.3.0/ResIN/man/ResIN-coercion-generics.Rd |only ResIN-2.3.0/ResIN/man/ResIN-reexports.Rd |only ResIN-2.3.0/ResIN/man/ResIN.Rd | 58 - ResIN-2.3.0/ResIN/man/ResIN_boots_draws.Rd |only ResIN-2.3.0/ResIN/man/ResIN_boots_execute.Rd | 30 ResIN-2.3.0/ResIN/man/ResIN_boots_executed.Rd |only ResIN-2.3.0/ResIN/man/ResIN_boots_extract.Rd | 34 ResIN-2.3.0/ResIN/man/ResIN_boots_prepare.Rd | 17 ResIN-2.3.0/ResIN/man/ResIN_boots_prepped.Rd |only ResIN-2.3.0/ResIN/man/ResIN_to_gephi.Rd | 41 ResIN-2.3.0/ResIN/man/ResIN_to_igraph.Rd | 14 ResIN-2.3.0/ResIN/man/ResIN_to_qgraph.Rd | 16 ResIN-2.3.0/ResIN/man/as.gephi.ResIN.Rd |only ResIN-2.3.0/ResIN/man/as.graphsjl.Rd |only ResIN-2.3.0/ResIN/man/as.graphsjl.ResIN.Rd |only ResIN-2.3.0/ResIN/man/as.igraph.ResIN.Rd |only ResIN-2.3.0/ResIN/man/as.network.ResIN.Rd |only ResIN-2.3.0/ResIN/man/as.networkx.Rd |only ResIN-2.3.0/ResIN/man/as.networkx.ResIN.Rd |only ResIN-2.3.0/ResIN/man/as.qgraph.ResIN.Rd |only ResIN-2.3.0/ResIN/man/as.tidygraph.ResIN.Rd |only ResIN-2.3.0/ResIN/man/lik_data.Rd | 2 ResIN-2.3.0/ResIN/vignettes/ResIN-VIGNETTE.Rmd | 23 48 files changed, 2580 insertions(+), 559 deletions(-)
Title: Location and Scale Invariant Power Transformations
Description: Location- and scale-invariant Box-Cox and Yeo-Johnson power transformations
allow for transforming variables with distributions distant from 0 to
normality. Transformers are implemented as S4 objects. These allow for
transforming new instances to normality after optimising fitting parameters
on other data. A test for central normality allows for rejecting
transformations that fail to produce a suitably normal distribution,
independent of sample number.
Author: Alex Zwanenburg [aut, cre] ,
Steffen Loeck [aut],
German Cancer Research Center [cph]
Maintainer: Alex Zwanenburg <alexander.zwanenburg@nct-dresden.de>
Diff between power.transform versions 1.0.3 dated 2026-01-15 and 1.0.4 dated 2026-03-02
DESCRIPTION | 6 MD5 | 9 NEWS.md | 8 R/FindParameters.R | 662 +++++++++++++++++----------------- inst |only tests/testthat/test-goodness-of-fit.R | 618 +++++++++++++++---------------- 6 files changed, 656 insertions(+), 647 deletions(-)
More information about power.transform at CRAN
Permanent link
Title: Fit, Simulate and Diagnose Exponential-Family Random Graph
Models to Egocentrically Sampled Network Data
Description: Utilities for managing egocentrically sampled network data and a wrapper around the 'ergm' package to facilitate ERGM inference and simulation from such data. See Krivitsky and Morris (2017) <doi:10.1214/16-AOAS1010>.
Author: Pavel N. Krivitsky [aut, cre] ,
Steven M. Goodreau [ctb],
Martina Morris [ctb],
Kirk Li [ctb],
Emily N. Beylerian [ctb],
Michal Bojanowski [ctb] ,
Chad Klumb [ctb]
Maintainer: Pavel N. Krivitsky <pavel@statnet.org>
Diff between ergm.ego versions 1.1.3 dated 2025-06-10 and 1.1.4 dated 2026-03-02
DESCRIPTION | 21 ++++--- LICENSE | 2 MD5 | 89 +++++++++++++++++---------------- NAMESPACE | 1 R/EgoStat.R | 2 R/EgoStat.duration.R | 2 R/EgoStat.node.attr.R | 30 ----------- R/InitErgmTerm.R | 2 R/control.ergm.ego.R | 12 +--- R/control.simulate.ergm.ego.R | 2 R/degreedist.R | 2 R/egor.R | 13 ++-- R/ergm.ego.R | 19 ++----- R/fmhfit.R | 2 R/gof.ergm.ego.R | 4 - R/predict.ergm.ego.R | 2 R/reweight.egor.R | 2 R/simulate.ergm.ego.R | 10 +-- R/summary.ergm.ego.R | 2 R/summary.statistics.egor.R | 14 ++--- R/zzz.R | 4 + build/partial.rdb |only build/stage23.rdb |binary inst/CITATION | 12 ++-- inst/NEWS.Rd | 34 ++++++++++++ inst/REFERENCES.bib |only man/control.ergm.ego.Rd | 10 +-- man/ergm.ego.Rd | 10 +-- man/gof.ergm.ego.Rd | 4 - man/simulate.ergm.ego.Rd | 12 +--- man/summary_formula.egor.Rd | 11 +--- src/changestats.c | 2 src/include_stubs.c | 2 src/init.c | 2 tests/testthat.R | 2 tests/testthat/Rprof.out |only tests/testthat/test-EgoStat.R | 4 - tests/testthat/test-attrmismatch.R | 2 tests/testthat/test-boot_jack.R | 2 tests/testthat/test-coef_recovery.R | 2 tests/testthat/test-degreedist.R | 15 ++--- tests/testthat/test-drop.R | 2 tests/testthat/test-gof.ergm.ego.R | 37 +++++-------- tests/testthat/test-mixingmatrix.R | 8 +- tests/testthat/test-netsize.adj.R | 2 tests/testthat/test-predict.ergm.ego.R | 10 +-- tests/testthat/test-table_ppop.R | 4 - 47 files changed, 204 insertions(+), 222 deletions(-)
Title: Package Documentation Websites with 'Quarto', 'Docsify',
'Docute', or 'MkDocs'
Description: This is a simple and powerful package to create, render, preview,
and deploy documentation websites for 'R' packages. It is a lightweight and
flexible alternative to 'pkgdown', with support for many documentation
generators, including 'Quarto', 'Docute', 'Docsify', and 'MkDocs'.
Author: Etienne Bacher [aut, cre, cph],
Vincent Arel-Bundock [aut]
Maintainer: Etienne Bacher <etienne.bacher@protonmail.com>
This is a re-admission after prior archival of version 0.7.1 dated 2026-02-17
Diff between altdoc versions 0.7.1 dated 2026-02-17 and 0.7.2 dated 2026-03-02
DESCRIPTION | 6 MD5 | 56 NEWS.md | 4 build/vignette.rds |binary tests/testthat/_snaps/docsify/render_docs.md | 898 +++++----- tests/testthat/_snaps/docsify/render_docs/index.html | 2 tests/testthat/_snaps/docute/render_docs.md | 878 ++++----- tests/testthat/_snaps/mkdocs/render_docs.md | 498 ++--- tests/testthat/_snaps/rd2qmd/long_title.qmd | 30 tests/testthat/examples/examples-man/between.Rd | 36 tests/testthat/examples/examples-man/between.md | 80 tests/testthat/examples/examples-man/is-internal.Rd | 36 tests/testthat/examples/examples-man/should-fail.Rd | 34 tests/testthat/examples/examples-qmd/with-preamble.qmd | 26 tests/testthat/examples/examples-qmd/without-preamble.qmd | 16 tests/testthat/examples/examples-vignettes/several-outputs.Rmd | 48 tests/testthat/examples/examples-vignettes/with-figure.Rmd | 50 tests/testthat/examples/examples-yaml/basic.Rmd | 20 tests/testthat/examples/examples-yaml/options.Rmd | 28 tests/testthat/examples/examples-yaml/several-outputs.Rmd | 32 tests/testthat/examples/testpkg.altdoc/NEWS.md | 18 tests/testthat/examples/testpkg.altdoc/README.Rmd | 82 tests/testthat/examples/testpkg.altdoc/README.md | 72 tests/testthat/examples/testpkg.altdoc/man/examplesIf_false.Rd | 44 tests/testthat/examples/testpkg.altdoc/man/examplesIf_true.Rd | 44 tests/testthat/examples/testpkg.altdoc/man/hello_base.Rd | 74 tests/testthat/examples/testpkg.altdoc/man/hello_r6.Rd | 178 - tests/testthat/examples/testpkg.altdoc/vignettes/test.Rmd | 42 tests/testthat/test-render_docs.R | 3 29 files changed, 1671 insertions(+), 1664 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-05-14 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-29 0.1.14
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-10-16 3.4.0-5
2025-07-23 3.4.0-4
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-05-16 2.1.8
2020-10-27 2.1.7
Title: Congruence Class Models for Networks
Description: Provides an implementation of Congruence Class Models for
generating networks. It facilitates sampling networks based
on specific topological properties and attribute mixing patterns using
a Markov Chain Monte Carlo framework. The implementation builds upon code
from the 'ergm' package; see Handcock et al. (2008) <doi:10.18637/jss.v024.i01>.
Author: Ravi Goyal [aut, cre],
Statnet Development Team [ctb, cph]
Maintainer: Ravi Goyal <ravi.j.goyal@gmail.com>
Diff between CCMnet versions 0.1.6 dated 2026-02-18 and 1.0.0 dated 2026-03-02
CCMnet-0.1.6/CCMnet/R/CCMnet_diagnostics_traceplot.R |only CCMnet-0.1.6/CCMnet/man/CCM_theoretical_check.Rd |only CCMnet-0.1.6/CCMnet/man/CCM_traceplot.Rd |only CCMnet-1.0.0/CCMnet/DESCRIPTION | 6 CCMnet-1.0.0/CCMnet/MD5 | 69 +- CCMnet-1.0.0/CCMnet/NAMESPACE | 9 CCMnet-1.0.0/CCMnet/R/CCMnet_MissingInf_Update_Prob_Distr_Params.R | 14 CCMnet-1.0.0/CCMnet/R/CCMnet_MissingInf_generate_partial_network.R | 4 CCMnet-1.0.0/CCMnet/R/CCMnet_Sample.R | 87 +- CCMnet-1.0.0/CCMnet/R/CCMnet_Sample_methods.R | 205 ++++-- CCMnet-1.0.0/CCMnet/R/CCMnet_StructAssess_plot_network.R | 2 CCMnet-1.0.0/CCMnet/R/CCMnet_constr_bi.R | 42 - CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni.R | 44 - CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_initalstat.R | 16 CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_obs_stats.R | 28 CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_verifyinput.R | 107 +-- CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_verifyinput_degdist.R | 97 +-- CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_verifyinput_degmxing.R | 2 CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_verifyinput_degmxing_clustering.R | 4 CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_verifyinput_edges.R | 215 ++---- CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_verifyinput_mixing.R | 2 CCMnet-1.0.0/CCMnet/R/CCMnet_constr_uni_verifyinput_mixing_degdist.R | 6 CCMnet-1.0.0/CCMnet/R/CCMnet_tests_degree.R | 2 CCMnet-1.0.0/CCMnet/R/CCMnet_theoretical_check.R | 68 +- CCMnet-1.0.0/CCMnet/R/CCMnet_theoretical_check_degmix.R | 4 CCMnet-1.0.0/CCMnet/R/CCMnet_theoretical_check_degmixclustering.R | 6 CCMnet-1.0.0/CCMnet/R/CCMnet_theoretical_check_degree.R | 4 CCMnet-1.0.0/CCMnet/R/CCMnet_theoretical_check_degree_mixing.R | 6 CCMnet-1.0.0/CCMnet/R/CCMnet_theoretical_check_density.R | 8 CCMnet-1.0.0/CCMnet/R/CCMnet_theoretical_check_mixing.R | 8 CCMnet-1.0.0/CCMnet/R/CCMnet_utils.R | 88 ++ CCMnet-1.0.0/CCMnet/inst/doc/CCMnet_introduction.R | 83 +- CCMnet-1.0.0/CCMnet/inst/doc/CCMnet_introduction.Rmd | 83 +- CCMnet-1.0.0/CCMnet/inst/doc/CCMnet_introduction.html | 312 +++++----- CCMnet-1.0.0/CCMnet/man/plot.ccm_sample.Rd |only CCMnet-1.0.0/CCMnet/man/sample_ccm.Rd | 82 +- CCMnet-1.0.0/CCMnet/man/sample_theoretical.Rd |only CCMnet-1.0.0/CCMnet/vignettes/CCMnet_introduction.Rmd | 83 +- 38 files changed, 1059 insertions(+), 737 deletions(-)
Title: Diagnostics for Pharmacometric Models
Description: Diagnostics for non-linear mixed-effects (population)
models from 'NONMEM' <https://www.iconplc.com/solutions/technologies/nonmem/>.
'xpose' facilitates data import, creation of numerical run summary
and provide 'ggplot2'-based graphics for data exploration and model
diagnostics.
Author: Benjamin Guiastrennec [aut, cre, cph],
Andrew C. Hooker [aut, cph],
Sebastian Ueckert [aut, cph],
Mike K. Smith [ctb],
Mats O. Karlsson [aut, cph]
Maintainer: Benjamin Guiastrennec <guiastrennec@gmail.com>
Diff between xpose versions 0.4.22 dated 2025-11-24 and 0.4.23 dated 2026-03-02
DESCRIPTION | 6 +++--- MD5 | 24 ++++++++++++------------ NEWS.md | 5 ++++- R/vpc_data.R | 12 ++++++------ R/zzz.R | 4 ++-- build/vignette.rds |binary inst/doc/access_xpdb_data.html | 2 +- inst/doc/customize_plots.html | 34 +++++++++++++++++----------------- inst/doc/import_model_outputs.html | 2 +- inst/doc/introduction.html | 10 +++++----- inst/doc/multiple_pages.html | 14 +++++++------- inst/doc/vpc.html | 8 ++++---- tests/testthat/test-vpc.R | 18 +++++++++++++++--- 13 files changed, 77 insertions(+), 62 deletions(-)
Title: Fast and Scalable Cellwise-Robust Ensemble
Description: Functions to perform robust variable selection and regression using the Fast and Scalable
Cellwise-Robust Ensemble (FSCRE) algorithm. The approach establishes a robust foundation
using the Detect Deviating Cells (DDC) algorithm and robust correlation estimates. It then
employs a competitive ensemble architecture where a robust Least Angle Regression (LARS)
engine proposes candidate variables and cross-validation arbitrates their assignment. A final
robust MM-estimator is applied to the selected predictors.
Author: Anthony Christidis [aut, cre],
Gabriela Cohen-Freue [aut]
Maintainer: Anthony Christidis <anthony.christidis@stat.ubc.ca>
Diff between srlars versions 1.0.1 dated 2023-07-16 and 2.0.0 dated 2026-03-02
srlars-1.0.1/srlars/R/Coefficients.R |only srlars-1.0.1/srlars/R/DataCheck.R |only srlars-1.0.1/srlars/R/Predictions.R |only srlars-1.0.1/srlars/R/add_optimal_predictor.R |only srlars-1.0.1/srlars/R/find_optimal.R |only srlars-1.0.1/srlars/R/initialize_ensembles.R |only srlars-1.0.1/srlars/R/remove_optimal_predictor.R |only srlars-1.0.1/srlars/tests/testthat/test_srlars.R |only srlars-2.0.0/srlars/DESCRIPTION | 27 - srlars-2.0.0/srlars/MD5 | 39 +- srlars-2.0.0/srlars/NAMESPACE | 10 srlars-2.0.0/srlars/NEWS.md | 3 srlars-2.0.0/srlars/R/checkInputData.R |only srlars-2.0.0/srlars/R/coef.srlars.R |only srlars-2.0.0/srlars/R/computeCVError.R |only srlars-2.0.0/srlars/R/computeFinalFit.R |only srlars-2.0.0/srlars/R/computeRobustFoundation.R |only srlars-2.0.0/srlars/R/getLarsProposal.R |only srlars-2.0.0/srlars/R/performSelectionLoop.R |only srlars-2.0.0/srlars/R/predict.srlars.R |only srlars-2.0.0/srlars/R/srlars.R | 306 ++++++--------------- srlars-2.0.0/srlars/README.md | 4 srlars-2.0.0/srlars/man/checkInputData.Rd |only srlars-2.0.0/srlars/man/coef.srlars.Rd | 85 ++--- srlars-2.0.0/srlars/man/computeCVError.Rd |only srlars-2.0.0/srlars/man/computeFinalFit.Rd |only srlars-2.0.0/srlars/man/computeRobustFoundation.Rd |only srlars-2.0.0/srlars/man/getLarsProposal.Rd |only srlars-2.0.0/srlars/man/performSelectionLoop.Rd |only srlars-2.0.0/srlars/man/predict.srlars.Rd | 75 ++--- srlars-2.0.0/srlars/man/srlars.Rd | 92 ++---- srlars-2.0.0/srlars/tests/testthat/test-srlars.R |only 32 files changed, 242 insertions(+), 399 deletions(-)
Title: Create Standalone and Composite Plots in 'ggplot2' for
Publications
Description: Provides functions for creating and annotating a composite plot in 'ggplot2'. Offers background themes and shortcut plotting functions that produce figures that are appropriate for the format of scientific journals. Some methods are described in Min and Zhou (2021) <doi:10.3389/fgene.2021.802894>.
Author: Seung Hyun Min [aut, cre]
Maintainer: Seung Hyun Min <seung.min@mail.mcgill.ca>
Diff between smplot2 versions 0.2.5 dated 2025-01-26 and 0.2.6 dated 2026-03-02
DESCRIPTION | 6 +-- MD5 | 94 ++++++++++++++++++++++++------------------------ R/sm_hgrid.R | 8 ++-- R/sm_hvgrid.R | 8 ++-- R/sm_vgrid.R | 8 ++-- R/sm_violin.R | 2 - README.md | 4 +- man/figures/logo.png |binary man/sm_add_legend.Rd | 30 +++++++++------ man/sm_add_point.Rd | 14 ++++--- man/sm_add_text.Rd | 15 ++++--- man/sm_auc.Rd | 10 ++--- man/sm_auc_all.Rd | 19 +++++---- man/sm_bar.Rd | 14 +++---- man/sm_bland_altman.Rd | 2 - man/sm_boxplot.Rd | 18 ++++----- man/sm_ci.Rd | 4 +- man/sm_classic.Rd | 4 +- man/sm_color.Rd | 4 +- man/sm_common_axis.Rd | 17 ++++---- man/sm_common_legend.Rd | 14 ++++--- man/sm_common_title.Rd | 2 - man/sm_common_xlabel.Rd | 2 - man/sm_common_ylabel.Rd | 2 - man/sm_corr_avgErr.Rd | 8 ++-- man/sm_effsize.Rd | 4 +- man/sm_forest.Rd | 22 ++++++----- man/sm_forest_annot.Rd | 20 +++++----- man/sm_hgrid.Rd | 4 +- man/sm_hist.Rd | 27 +++++++------ man/sm_hvgrid.Rd | 4 +- man/sm_hvgrid_minor.Rd | 4 +- man/sm_minimal.Rd | 4 +- man/sm_panel_label.Rd | 16 +++++--- man/sm_plot_clean.Rd | 10 +++-- man/sm_pointplot.Rd | 2 - man/sm_power.Rd | 4 +- man/sm_put_together.Rd | 30 +++++++++------ man/sm_raincloud.Rd | 23 +++++------ man/sm_slope.Rd | 16 ++++---- man/sm_slope_all.Rd | 20 +++++----- man/sm_slope_mean.Rd | 18 +++++---- man/sm_slope_theme.Rd | 4 +- man/sm_statBlandAlt.Rd | 2 - man/sm_statCorr.Rd | 10 ++--- man/sm_stdErr.Rd | 4 -- man/sm_vgrid.Rd | 4 +- man/sm_violin.Rd | 10 ++--- 48 files changed, 302 insertions(+), 269 deletions(-)
Title: Instrumental-Variables Regression by '2SLS', '2SM', or '2SMM',
with Diagnostics
Description: Instrumental variable estimation for linear models by two-stage least-squares (2SLS) regression or by robust-regression via M-estimation (2SM) or MM-estimation (2SMM). The main ivreg() model-fitting function is designed to provide a workflow as similar as possible to standard lm() regression. A wide range of methods is provided for fitted ivreg model objects, including extensive functionality for computing and graphing regression diagnostics in addition to other standard model tools.
Author: John Fox [aut] ,
Christian Kleiber [aut] ,
Achim Zeileis [aut, cre] ,
Nikolas Kuschnig [ctb] ,
R Core Team [ctb]
Maintainer: Achim Zeileis <Achim.Zeileis@R-project.org>
Diff between ivreg versions 0.6-6 dated 2026-02-09 and 0.6-7 dated 2026-03-02
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NAMESPACE | 3 +++ NEWS.md | 10 ++++++++++ R/ivregDiagnostics.R | 12 ++++++++++++ tests/testthat/test-case-deletion.R | 4 ++-- 6 files changed, 36 insertions(+), 11 deletions(-)
Title: Grouped Hyper Data Frame
Description: An S3 class 'groupedHyperframe' that inherits from
the hyper data frame class from the 'spatstat' packages.
Batch process and aggregation of the hyper column(s)
over a nested grouping structure.
Author: Tingting Zhan [aut, cre]
Maintainer: Tingting Zhan <tingtingzhan@gmail.com>
Diff between groupedHyperframe versions 0.3.4 dated 2026-02-01 and 0.3.5 dated 2026-03-02
groupedHyperframe-0.3.4/groupedHyperframe/build |only groupedHyperframe-0.3.4/groupedHyperframe/inst/doc |only groupedHyperframe-0.3.4/groupedHyperframe/vignettes |only groupedHyperframe-0.3.5/groupedHyperframe/DESCRIPTION | 17 groupedHyperframe-0.3.5/groupedHyperframe/MD5 | 216 ++++------ groupedHyperframe-0.3.5/groupedHyperframe/NAMESPACE | 18 groupedHyperframe-0.3.5/groupedHyperframe/R/0PACKAGE.R | 12 groupedHyperframe-0.3.5/groupedHyperframe/R/Defunct.R | 2 groupedHyperframe-0.3.5/groupedHyperframe/R/Math.R | 41 + groupedHyperframe-0.3.5/groupedHyperframe/R/Surv.R | 2 groupedHyperframe-0.3.5/groupedHyperframe/R/aggregate.R | 15 groupedHyperframe-0.3.5/groupedHyperframe/R/aggregate_marks.R | 24 - groupedHyperframe-0.3.5/groupedHyperframe/R/append_marks.R | 3 groupedHyperframe-0.3.5/groupedHyperframe/R/as.groupedHyperframe.R | 5 groupedHyperframe-0.3.5/groupedHyperframe/R/attr_.R | 11 groupedHyperframe-0.3.5/groupedHyperframe/R/cash_set.R | 7 groupedHyperframe-0.3.5/groupedHyperframe/R/cbind.groupedHyperframe.R | 5 groupedHyperframe-0.3.5/groupedHyperframe/R/cor_spatial.R | 7 groupedHyperframe-0.3.5/groupedHyperframe/R/density_marks.R | 12 groupedHyperframe-0.3.5/groupedHyperframe/R/fvlist.R | 7 groupedHyperframe-0.3.5/groupedHyperframe/R/groupedHyperframe.R | 8 groupedHyperframe-0.3.5/groupedHyperframe/R/grouped_ppp.R | 6 groupedHyperframe-0.3.5/groupedHyperframe/R/hyperframe_S3.R | 3 groupedHyperframe-0.3.5/groupedHyperframe/R/interpolation.fv.R | 7 groupedHyperframe-0.3.5/groupedHyperframe/R/kerndens.R | 13 groupedHyperframe-0.3.5/groupedHyperframe/R/key1val.R | 7 groupedHyperframe-0.3.5/groupedHyperframe/R/kmeans.R | 10 groupedHyperframe-0.3.5/groupedHyperframe/R/kmeans_S3.R | 11 groupedHyperframe-0.3.5/groupedHyperframe/R/ksmooth.fv.R | 3 groupedHyperframe-0.3.5/groupedHyperframe/R/lastLegal.R | 3 groupedHyperframe-0.3.5/groupedHyperframe/R/loess.fv.R | 6 groupedHyperframe-0.3.5/groupedHyperframe/R/mc_identical_by.R | 166 +++---- groupedHyperframe-0.3.5/groupedHyperframe/R/nncross.R | 11 groupedHyperframe-0.3.5/groupedHyperframe/R/op_hyperframe.R | 9 groupedHyperframe-0.3.5/groupedHyperframe/R/op_ppp.R | 9 groupedHyperframe-0.3.5/groupedHyperframe/R/op_ppplist.R | 9 groupedHyperframe-0.3.5/groupedHyperframe/R/pmean.R | 7 groupedHyperframe-0.3.5/groupedHyperframe/R/ppp_S3.R | 9 groupedHyperframe-0.3.5/groupedHyperframe/R/quantile.R | 18 groupedHyperframe-0.3.5/groupedHyperframe/R/rlabelRes.R | 7 groupedHyperframe-0.3.5/groupedHyperframe/R/rmax.R | 3 groupedHyperframe-0.3.5/groupedHyperframe/R/smooth.spline.fv.R | 6 groupedHyperframe-0.3.5/groupedHyperframe/R/subset_ppp_tzh.R | 2 groupedHyperframe-0.3.5/groupedHyperframe/R/superimpose.hyperframe.R | 5 groupedHyperframe-0.3.5/groupedHyperframe/R/vectorlist.R | 10 groupedHyperframe-0.3.5/groupedHyperframe/R/vignette.R | 6 groupedHyperframe-0.3.5/groupedHyperframe/R/vtrapz.R | 21 groupedHyperframe-0.3.5/groupedHyperframe/man/aggregate.hyperframe.Rd | 15 groupedHyperframe-0.3.5/groupedHyperframe/man/aggregate_marks.Rd | 21 groupedHyperframe-0.3.5/groupedHyperframe/man/append_marks_set.Rd | 3 groupedHyperframe-0.3.5/groupedHyperframe/man/as.fvlist.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/as.groupedHyperframe.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/as.matrix.pairwise_cor_spatial.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/as.vectorlist.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/attr_.Rd | 9 groupedHyperframe-0.3.5/groupedHyperframe/man/batch.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/cash-set-.groupedHyperframe.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/cbind.groupedHyperframe.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/cumvtrapz.Rd | 11 groupedHyperframe-0.3.5/groupedHyperframe/man/defunct.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/density_marks.Rd | 11 groupedHyperframe-0.3.5/groupedHyperframe/man/dot-nncross.Rd | 11 groupedHyperframe-0.3.5/groupedHyperframe/man/global_envelope_test_.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/groupGeneric_fvlist.Rd | 7 groupedHyperframe-0.3.5/groupedHyperframe/man/groupGeneric_ppp.Rd | 8 groupedHyperframe-0.3.5/groupedHyperframe/man/groupGeneric_ppplist.Rd | 7 groupedHyperframe-0.3.5/groupedHyperframe/man/groupGeneric_psp.Rd | 11 groupedHyperframe-0.3.5/groupedHyperframe/man/groupGeneric_tess.Rd | 8 groupedHyperframe-0.3.5/groupedHyperframe/man/groupedHyperframe-package.Rd | 9 groupedHyperframe-0.3.5/groupedHyperframe/man/grouped_ppp.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/interpolation_fv.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/is.fvlist.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/kerndens.Rd | 11 groupedHyperframe-0.3.5/groupedHyperframe/man/keyval.Rd | 7 groupedHyperframe-0.3.5/groupedHyperframe/man/kmeans_etc.Rd | 9 groupedHyperframe-0.3.5/groupedHyperframe/man/ksmooth.fv.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/lastLegal.Rd | 3 groupedHyperframe-0.3.5/groupedHyperframe/man/length.hyperframe.Rd | 3 groupedHyperframe-0.3.5/groupedHyperframe/man/loess.fv.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/mc_identical_by.Rd | 6 groupedHyperframe-0.3.5/groupedHyperframe/man/methods2kable.Rd | 4 groupedHyperframe-0.3.5/groupedHyperframe/man/na_fail_ppp.Rd | 7 groupedHyperframe-0.3.5/groupedHyperframe/man/op_hyperframe.Rd | 4 groupedHyperframe-0.3.5/groupedHyperframe/man/op_ppplist.Rd | 9 groupedHyperframe-0.3.5/groupedHyperframe/man/pairwise_cor_spatial.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/plot.pppkm.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/pmean.Rd | 7 groupedHyperframe-0.3.5/groupedHyperframe/man/ppp2..Rd | 9 groupedHyperframe-0.3.5/groupedHyperframe/man/print.groupedHyperframe.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/print.pppkm.Rd | 3 groupedHyperframe-0.3.5/groupedHyperframe/man/print.summary.groupedHyperframe.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/quantile.anylist.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/quantile.hyperframe.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/quantile.ppp.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/quantile.ppplist.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/rlabelRes.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/rmax.Rd | 3 groupedHyperframe-0.3.5/groupedHyperframe/man/smooth.spline.fv.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/split.hyperframekm.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/split.pppkm.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/split.pppkmlist.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/sub-.groupedHyperframe.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/sub-.ppp_tzh.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/summary.Surv.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/summary.groupedHyperframe.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/superimpose.hyperframe.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/t.vectorlist.Rd | 5 groupedHyperframe-0.3.5/groupedHyperframe/man/visualize_vtrapz.Rd | 2 groupedHyperframe-0.3.5/groupedHyperframe/man/vtrapz.Rd | 4 109 files changed, 650 insertions(+), 462 deletions(-)
More information about groupedHyperframe at CRAN
Permanent link
Title: Spherical Trigonometry
Description: Spherical trigonometry for geographic applications. That is, compute distances and related measures for angular (longitude/latitude) locations.
Author: Robert J. Hijmans [cre, aut],
Charles Karney [ctb] ,
Ed Williams [ctb],
Chris Vennes [ctb]
Maintainer: Robert J. Hijmans <r.hijmans@gmail.com>
Diff between geosphere versions 1.5-20 dated 2024-10-04 and 1.6-5 dated 2026-03-02
geosphere-1.5-20/geosphere/src/AlbersEqualArea.cpp |only geosphere-1.5-20/geosphere/src/AlbersEqualArea.h |only geosphere-1.5-20/geosphere/src/AzimuthalEquidistant.cpp |only geosphere-1.5-20/geosphere/src/AzimuthalEquidistant.h |only geosphere-1.5-20/geosphere/src/CassiniSoldner.cpp |only geosphere-1.5-20/geosphere/src/CassiniSoldner.h |only geosphere-1.5-20/geosphere/src/CircularEngine.cpp |only geosphere-1.5-20/geosphere/src/CircularEngine.h |only geosphere-1.5-20/geosphere/src/DMS.cpp |only geosphere-1.5-20/geosphere/src/DMS.h |only geosphere-1.5-20/geosphere/src/Ellipsoid.cpp |only geosphere-1.5-20/geosphere/src/Ellipsoid.h |only geosphere-1.5-20/geosphere/src/GARS.cpp |only geosphere-1.5-20/geosphere/src/GARS.h |only geosphere-1.5-20/geosphere/src/GeoCoords.cpp |only geosphere-1.5-20/geosphere/src/GeoCoords.h |only geosphere-1.5-20/geosphere/src/Geocentric.cpp |only geosphere-1.5-20/geosphere/src/Geocentric.h |only geosphere-1.5-20/geosphere/src/GeodesicExactC4.cpp |only geosphere-1.5-20/geosphere/src/Geohash.cpp |only geosphere-1.5-20/geosphere/src/Geohash.h |only geosphere-1.5-20/geosphere/src/Geoid.cpp |only geosphere-1.5-20/geosphere/src/Geoid.h |only geosphere-1.5-20/geosphere/src/Georef.cpp |only geosphere-1.5-20/geosphere/src/Georef.h |only geosphere-1.5-20/geosphere/src/Gnomonic.cpp |only geosphere-1.5-20/geosphere/src/Gnomonic.h |only geosphere-1.5-20/geosphere/src/GravityCircle.cpp |only geosphere-1.5-20/geosphere/src/GravityCircle.h |only geosphere-1.5-20/geosphere/src/GravityModel.cpp |only geosphere-1.5-20/geosphere/src/GravityModel.h |only geosphere-1.5-20/geosphere/src/LambertConformalConic.cpp |only geosphere-1.5-20/geosphere/src/LambertConformalConic.h |only geosphere-1.5-20/geosphere/src/LocalCartesian.cpp |only geosphere-1.5-20/geosphere/src/LocalCartesian.h |only geosphere-1.5-20/geosphere/src/MGRS.cpp |only geosphere-1.5-20/geosphere/src/MGRS.h |only geosphere-1.5-20/geosphere/src/MagneticCircle.cpp |only geosphere-1.5-20/geosphere/src/MagneticCircle.h |only geosphere-1.5-20/geosphere/src/MagneticModel.cpp |only geosphere-1.5-20/geosphere/src/MagneticModel.h |only geosphere-1.5-20/geosphere/src/NearestNeighbor.h |only geosphere-1.5-20/geosphere/src/NormalGravity.cpp |only geosphere-1.5-20/geosphere/src/NormalGravity.h |only geosphere-1.5-20/geosphere/src/PolarStereographic.cpp |only geosphere-1.5-20/geosphere/src/PolarStereographic.h |only geosphere-1.5-20/geosphere/src/SphericalEngine.cpp |only geosphere-1.5-20/geosphere/src/SphericalEngine.h |only geosphere-1.5-20/geosphere/src/SphericalHarmonic.h |only geosphere-1.5-20/geosphere/src/SphericalHarmonic1.h |only geosphere-1.5-20/geosphere/src/SphericalHarmonic2.h |only geosphere-1.5-20/geosphere/src/UTMUPS.cpp |only geosphere-1.5-20/geosphere/src/UTMUPS.h |only geosphere-1.5-20/geosphere/src/intersect.cpp |only geosphere-1.6-5/geosphere/DESCRIPTION | 10 geosphere-1.6-5/geosphere/MD5 | 172 +--- geosphere-1.6-5/geosphere/R/alongTrack.R | 80 +- geosphere-1.6-5/geosphere/R/areaPolygon.R | 48 + geosphere-1.6-5/geosphere/R/centroid.R | 4 geosphere-1.6-5/geosphere/R/dist2Line.R | 6 geosphere-1.6-5/geosphere/R/distHaversine.R | 2 geosphere-1.6-5/geosphere/R/gcIntermediate.R | 57 + geosphere-1.6-5/geosphere/R/geomedian.R | 5 geosphere-1.6-5/geosphere/R/greatCircle.R | 6 geosphere-1.6-5/geosphere/R/lengthLine.R | 14 geosphere-1.6-5/geosphere/R/makePoly.R | 32 geosphere-1.6-5/geosphere/R/plotPoly.R | 2 geosphere-1.6-5/geosphere/R/pointsToMatrix.R | 5 geosphere-1.6-5/geosphere/R/sampleAlong.R | 35 geosphere-1.6-5/geosphere/R/span.R | 31 geosphere-1.6-5/geosphere/build/partial.rdb |binary geosphere-1.6-5/geosphere/build/vignette.rds |binary geosphere-1.6-5/geosphere/inst/doc/geosphere.R | 2 geosphere-1.6-5/geosphere/inst/doc/geosphere.Rnw | 8 geosphere-1.6-5/geosphere/inst/doc/geosphere.pdf |binary geosphere-1.6-5/geosphere/man/area.Rd | 4 geosphere-1.6-5/geosphere/man/intermediate.Rd | 12 geosphere-1.6-5/geosphere/man/span.Rd | 6 geosphere-1.6-5/geosphere/src/Accumulator.cpp | 2 geosphere-1.6-5/geosphere/src/Accumulator.h | 2 geosphere-1.6-5/geosphere/src/AuxAngle.cpp |only geosphere-1.6-5/geosphere/src/AuxAngle.h |only geosphere-1.6-5/geosphere/src/AuxLatitude.cpp |only geosphere-1.6-5/geosphere/src/AuxLatitude.h |only geosphere-1.6-5/geosphere/src/Config.h | 6 geosphere-1.6-5/geosphere/src/Constants.h | 92 +- geosphere-1.6-5/geosphere/src/DAuxLatitude.cpp |only geosphere-1.6-5/geosphere/src/DAuxLatitude.h |only geosphere-1.6-5/geosphere/src/DST.cpp | 102 +- geosphere-1.6-5/geosphere/src/DST.h | 44 - geosphere-1.6-5/geosphere/src/EllipticFunction.cpp | 106 ++ geosphere-1.6-5/geosphere/src/EllipticFunction.h | 25 geosphere-1.6-5/geosphere/src/Geodesic.cpp | 56 - geosphere-1.6-5/geosphere/src/Geodesic.h | 60 + geosphere-1.6-5/geosphere/src/GeodesicExact.cpp | 32 geosphere-1.6-5/geosphere/src/GeodesicExact.h | 50 - geosphere-1.6-5/geosphere/src/GeodesicLine.cpp | 19 geosphere-1.6-5/geosphere/src/GeodesicLine.h | 54 - geosphere-1.6-5/geosphere/src/GeodesicLineExact.cpp | 7 geosphere-1.6-5/geosphere/src/GeodesicLineExact.h | 151 +-- geosphere-1.6-5/geosphere/src/Intersect.cpp |only geosphere-1.6-5/geosphere/src/Intersect.h |only geosphere-1.6-5/geosphere/src/Math.cpp | 165 ++-- geosphere-1.6-5/geosphere/src/Math.h | 100 +- geosphere-1.6-5/geosphere/src/OSGB.cpp | 8 geosphere-1.6-5/geosphere/src/OSGB.h | 52 - geosphere-1.6-5/geosphere/src/PolygonArea.cpp | 28 geosphere-1.6-5/geosphere/src/PolygonArea.h | 19 geosphere-1.6-5/geosphere/src/Rhumb.cpp | 543 ++++++-------- geosphere-1.6-5/geosphere/src/Rhumb.h | 188 +--- geosphere-1.6-5/geosphere/src/TransverseMercator.cpp | 22 geosphere-1.6-5/geosphere/src/TransverseMercator.h | 32 geosphere-1.6-5/geosphere/src/TransverseMercatorExact.cpp | 37 geosphere-1.6-5/geosphere/src/TransverseMercatorExact.h | 8 geosphere-1.6-5/geosphere/src/Utility.cpp | 6 geosphere-1.6-5/geosphere/src/Utility.h | 130 ++- geosphere-1.6-5/geosphere/src/kissfft.h | 53 + geosphere-1.6-5/geosphere/vignettes/geosphere.Rnw | 8 118 files changed, 1529 insertions(+), 1219 deletions(-)