Title: Double Machine Learning for Static Panel Models with Fixed
Effects
Description: The 'xtdml' package implements partially linear panel regression (PLPR) models with high-dimensional confounding variables and an exogenous treatment variable within the double machine learning framework. The package is used to estimate the structural parameter (treatment effect) in static panel data models with fixed effects using the approaches established in Clarke and Polselli (2025) <doi:10.1093/ectj/utaf011>. 'xtdml' is built on the object-oriented package 'DoubleML' (Bach et al., 2024) <doi:10.18637/jss.v108.i03> using the 'mlr3' ecosystem.
Author: Annalivia Polselli [aut, cre]
Maintainer: Annalivia Polselli <apolselli.econ@gmail.com>
Diff between xtdml versions 0.1.11 dated 2025-12-11 and 0.1.12 dated 2026-03-13
DESCRIPTION | 12 MD5 | 28 NAMESPACE | 116 +-- R/dataset.R | 198 ++--- R/helper.R | 888 +++++++++++------------ R/xtdml_data.R | 1438 +++++++++++++++++++------------------- R/xtdml_main.R | 212 +++++ R/xtdml_plr.R | 1166 +++++++++++++++--------------- R/zzz.R | 40 - README.md | 138 +++ man/make_plpr_data.Rd | 122 +-- man/xtdml.Rd | 997 +++++++++++++------------- man/xtdml_data.Rd | 414 +++++----- man/xtdml_data_from_data_frame.Rd | 152 ++-- man/xtdml_plr.Rd | 655 ++++++++--------- 15 files changed, 3491 insertions(+), 3085 deletions(-)
Title: Adaptive Machine Learning-Powered, Context-Matching Tool for
Single-Cell and Spatial Transcriptomics Annotation
Description: Annotates single-cell and spatial-transcriptomic (ST) data using context-matching marker datasets. It creates a unified marker list (`Markers_list`) from multiple sources: built-in curated databases ('Cellmarker2', 'PanglaoDB', 'ScType', 'scIBD', 'TCellSI', 'PCTIT', 'PCTAM'), Seurat objects with cell labels, or user-provided Excel tables. SlimR first uses adaptive machine learning for parameter optimization, and then offers two automated annotation approaches: 'cluster-based' and 'per-cell'. Cluster-based annotation assigns one label per cluster, expression-based probability calculation, and AUC validation. Per-cell annotation assigns labels to individual cells using three scoring methods with adaptive thresholds and ratio-based confidence filtering, plus optional UMAP spatial smoothing, making it ideal for heterogeneous clusters and rare cell types. The package also supports semi-automated workflows with heatmaps, feature plots, and combined visualizations for manual annotation. For m [...truncated...]
Author: Zhaoqing Wang [aut, cre]
Maintainer: Zhaoqing Wang <zhaoqingwang@mail.sdu.edu.cn>
Diff between SlimR versions 1.1.1 dated 2026-02-05 and 1.1.2 dated 2026-03-13
DESCRIPTION | 10 MD5 | 53 +- NAMESPACE | 1 NEWS.md | 7 R/Celltype_Annotation_PerCell.R | 35 + R/Database_ScType.R |only R/Markers_filter_ScType.R |only R/onattach.R | 19 - README.md | 609 +++++++++------------------------ data/ScType.rda |only data/ScType_raw.rda |only data/ScType_table.rda |only man/Cellmarker2.Rd | 5 man/Cellmarker2_raw.Rd | 5 man/Cellmarker2_table.Rd | 5 man/Markers_filter_Cellmarker2.Rd | 1 man/Markers_filter_PanglaoDB.Rd | 1 man/Markers_filter_ScType.Rd |only man/Markers_list_PCTAM.Rd | 5 man/Markers_list_PCTIT.Rd | 5 man/Markers_list_TCellSI.Rd | 5 man/Markers_list_scIBD.Rd | 5 man/PanglaoDB.Rd | 5 man/PanglaoDB_raw.Rd | 5 man/PanglaoDB_table.Rd | 5 man/Read_excel_markers.Rd | 1 man/Read_seurat_markers.Rd | 1 man/ScType.Rd |only man/ScType_raw.Rd |only man/ScType_table.Rd |only tests/testthat/Rplots.pdf |binary tests/testthat/test-marker-functions.R | 47 ++ 32 files changed, 339 insertions(+), 496 deletions(-)
Title: Conduct Response Item Network (ResIN) Analysis with Social
Response Data
Description: Contains various tools to estimate, analyze, and visualize Response Item Networks. 'ResIN' dummy-codes ordered and qualitative response choices from (survey) data, calculates pairwise associations and maps the location of each item response as a node in a force-directed network. Please refer to <https://www.resinmethod.net/> for more details.
Author: Philip Warncke [cre, aut],
Dino Carpentras [aut],
Adrian Lueders [aut]
Maintainer: Philip Warncke <philip.warncke@ul.ie>
Diff between ResIN versions 2.3.0 dated 2026-03-02 and 2.3.1 dated 2026-03-13
DESCRIPTION | 10 MD5 | 38 - NAMESPACE | 11 NEWS.md | 26 + R/BrJSocPsychol_2024.R | 1 R/ResIN.R | 866 ++++++++++++++++++++++++++++++++---------- R/ResIN_boots_execute.R | 246 ++++++++--- R/ResIN_boots_extract.R | 5 R/ResIN_boots_prepare.R | 7 R/methods-ResIN.R | 16 data/BrJSocPsychol_2024.RData |binary inst/doc/ResIN-VIGNETTE.R | 38 - inst/doc/ResIN-VIGNETTE.Rmd | 77 +-- inst/doc/ResIN-VIGNETTE.html | 132 ++---- man/ResIN.Rd | 254 ++++++------ man/ResIN_boots_execute.Rd | 20 man/ResIN_boots_extract.Rd | 5 man/ResIN_boots_prepare.Rd | 7 man/plot.ResIN.Rd | 4 vignettes/ResIN-VIGNETTE.Rmd | 77 +-- 20 files changed, 1175 insertions(+), 665 deletions(-)
Title: Sparse Additive Modelling
Description: Computationally efficient tools for high dimensional predictive
modeling (regression and classification). SAM is short for sparse
additive modeling, and adopts the computationally efficient basis
spline technique. We solve the optimization problems by various
computational algorithms including the block coordinate descent
algorithm, fast iterative soft-thresholding algorithm, and newton method.
The computation is further accelerated by warm-start and active-set tricks.
Author: Haoming Jiang [aut],
Yukun Ma [aut],
Han Liu [aut],
Kathryn Roeder [aut],
Xingguo Li [aut],
Tuo Zhao [aut, cre]
Maintainer: Tuo Zhao <tourzhao@gatech.edu>
Diff between SAM versions 1.2 dated 2026-02-19 and 1.3 dated 2026-03-13
DESCRIPTION | 6 +- MD5 | 62 ++++++++++++--------- NAMESPACE | 5 + NEWS.md |only R/aaa_sam_utils.R | 51 +++++++++++++++++ R/sam.R |only R/samEL.R | 33 ++++++++--- R/samHL.R | 21 ++++--- R/samLL.R | 32 ++++++++--- R/samQL.R | 50 ++++++++++++++--- README.md |only man/sam.Rd |only man/samEL.Rd | 22 +++++++ man/samHL.Rd | 10 +++ man/samLL.Rd | 22 +++++++ man/samQL.Rd | 37 ++++++++++++ src/amalgamation.cpp | 2 src/c_api.cpp | 16 ++--- src/c_api/c_api_utils.h |only src/c_api/grpLR.cpp | 41 +++++--------- src/c_api/grpPR.cpp | 40 +++++--------- src/c_api/grpSVM.cpp | 76 ++++++++++++++++++-------- src/c_api/grplasso.cpp | 100 ++++++++++++++++++++--------------- src/objective/GLMObjective.cpp | 64 ++++++++++++++-------- src/objective/GLMObjective.h | 7 ++ src/objective/LinearCovObjective.cpp |only src/objective/LinearCovObjective.h |only src/objective/LinearObjective.cpp | 9 +-- src/objective/objective.h | 10 +++ src/solver/actgd.cpp |only src/solver/actgd.h | 20 ++----- src/solver/actnewton.cpp | 66 ++++++++++++++++++++++- src/solver/solver_params.cpp | 5 + src/solver/solver_params.h | 19 +++++- src/utils.h | 10 +++ tests/test_poisson.R |only tests/test_svm.R |only 37 files changed, 604 insertions(+), 232 deletions(-)
Title: Generate Citation File Format ('cff') Metadata for R Packages
Description: The Citation File Format version 1.2.0
<doi:10.5281/zenodo.5171937> is a human and machine readable file
format which provides citation metadata for software. This package
provides core utilities to generate and validate this metadata.
Author: Diego Hernangomez [aut, cre, cph] ,
Joao Martins [rev] ,
Scott Chamberlain [rev]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between cffr versions 1.2.1 dated 2026-01-12 and 1.3.0 dated 2026-03-13
cffr-1.2.1/cffr/inst/doc/bibtex-cff.Rmd |only cffr-1.2.1/cffr/inst/doc/cffr.Rmd |only cffr-1.2.1/cffr/inst/doc/joss-paper.Rmd |only cffr-1.2.1/cffr/inst/doc/r-cff.Rmd |only cffr-1.2.1/cffr/vignettes/bibtex-cff.Rmd |only cffr-1.2.1/cffr/vignettes/cffr.Rmd |only cffr-1.2.1/cffr/vignettes/joss-paper.Rmd |only cffr-1.2.1/cffr/vignettes/r-cff.Rmd |only cffr-1.3.0/cffr/DESCRIPTION | 16 cffr-1.3.0/cffr/MD5 | 196 cffr-1.3.0/cffr/NEWS.md | 31 cffr-1.3.0/cffr/R/as_bibentry.R | 851 +- cffr-1.3.0/cffr/R/as_cff.R | 15 cffr-1.3.0/cffr/R/as_cff_person.R | 37 cffr-1.3.0/cffr/R/as_cff_reference.R | 2 cffr-1.3.0/cffr/R/assertions.R | 28 cffr-1.3.0/cffr/R/cff.R | 11 cffr-1.3.0/cffr/R/cff_create.R | 31 cffr-1.3.0/cffr/R/cff_gha_update.R | 154 cffr-1.3.0/cffr/R/cff_git_hook.R | 40 cffr-1.3.0/cffr/R/cff_modify.R | 16 cffr-1.3.0/cffr/R/cff_read.R | 584 - cffr-1.3.0/cffr/R/cff_read_bib_text.R | 19 cffr-1.3.0/cffr/R/cff_validate.R | 265 cffr-1.3.0/cffr/R/cff_write.R | 371 cffr-1.3.0/cffr/R/cff_write_misc.R | 290 cffr-1.3.0/cffr/R/deprecated.R | 16 cffr-1.3.0/cffr/R/encoded_utf_to_latex.R | 6 cffr-1.3.0/cffr/R/methods.R | 7 cffr-1.3.0/cffr/R/utils-alerts.R | 178 cffr-1.3.0/cffr/R/utils-bib.R | 1 cffr-1.3.0/cffr/R/utils-cff_read.R | 10 cffr-1.3.0/cffr/R/utils-cff_ref.R | 1 cffr-1.3.0/cffr/R/utils-create.R | 451 - cffr-1.3.0/cffr/R/utils-persons.R | 29 cffr-1.3.0/cffr/R/utils-schema.R | 4 cffr-1.3.0/cffr/R/utils.R | 27 cffr-1.3.0/cffr/README.md | 800 +- cffr-1.3.0/cffr/build/partial.rdb |binary cffr-1.3.0/cffr/build/vignette.rds |binary cffr-1.3.0/cffr/data/cran_to_spdx.rda |binary cffr-1.3.0/cffr/inst/REFERENCES.bib | 95 cffr-1.3.0/cffr/inst/WORDLIST | 1 cffr-1.3.0/cffr/inst/doc/bibtex-cff.R | 371 cffr-1.3.0/cffr/inst/doc/bibtex-cff.html | 4178 +++++------ cffr-1.3.0/cffr/inst/doc/bibtex-cff.qmd |only cffr-1.3.0/cffr/inst/doc/cffr.R | 63 cffr-1.3.0/cffr/inst/doc/cffr.html | 1119 +- cffr-1.3.0/cffr/inst/doc/cffr.qmd |only cffr-1.3.0/cffr/inst/doc/joss-paper.html | 377 cffr-1.3.0/cffr/inst/doc/joss-paper.qmd |only cffr-1.3.0/cffr/inst/doc/r-cff.R | 172 cffr-1.3.0/cffr/inst/doc/r-cff.html | 2964 +++---- cffr-1.3.0/cffr/inst/doc/r-cff.qmd |only cffr-1.3.0/cffr/inst/examples/CITATION_basic.cff | 2 cffr-1.3.0/cffr/inst/examples/CITATION_rmarkdown | 4 cffr-1.3.0/cffr/inst/schemaorg.json | 4 cffr-1.3.0/cffr/inst/yaml/update-citation-cff.yaml | 76 cffr-1.3.0/cffr/man/as_bibentry.Rd | 21 cffr-1.3.0/cffr/man/as_cff.Rd | 14 cffr-1.3.0/cffr/man/as_cff_person.Rd | 27 cffr-1.3.0/cffr/man/cff.Rd | 8 cffr-1.3.0/cffr/man/cff_class.Rd | 36 cffr-1.3.0/cffr/man/cff_create.Rd | 23 cffr-1.3.0/cffr/man/cff_gha_update.Rd | 12 cffr-1.3.0/cffr/man/cff_git_hook.Rd | 38 cffr-1.3.0/cffr/man/cff_modify.Rd | 13 cffr-1.3.0/cffr/man/cff_read.Rd | 18 cffr-1.3.0/cffr/man/cff_read_bib_text.Rd | 15 cffr-1.3.0/cffr/man/cff_schema.Rd | 2 cffr-1.3.0/cffr/man/cff_validate.Rd | 6 cffr-1.3.0/cffr/man/cff_write.Rd | 22 cffr-1.3.0/cffr/man/cff_write_misc.Rd | 24 cffr-1.3.0/cffr/man/chunks/cffclass.Rmd | 31 cffr-1.3.0/cffr/man/chunks/person.Rmd | 6 cffr-1.3.0/cffr/man/deprecated_cff_bibentry.Rd | 3 cffr-1.3.0/cffr/man/deprecated_cff_from_bib.Rd | 8 cffr-1.3.0/cffr/man/deprecated_cff_to_bib.Rd | 14 cffr-1.3.0/cffr/man/deprecated_write.Rd | 10 cffr-1.3.0/cffr/man/encoded_utf_to_latex.Rd | 6 cffr-1.3.0/cffr/tests/testthat/_snaps/as_cff_reference.md | 2 cffr-1.3.0/cffr/tests/testthat/_snaps/cff_gha_update.md | 46 cffr-1.3.0/cffr/tests/testthat/_snaps/utils-create.md | 2387 +++--- cffr-1.3.0/cffr/tests/testthat/test-as_bibentry.R | 1 cffr-1.3.0/cffr/tests/testthat/test-as_cff.R | 1 cffr-1.3.0/cffr/tests/testthat/test-as_cff_person.R | 1 cffr-1.3.0/cffr/tests/testthat/test-as_cff_reference.R | 1521 +--- cffr-1.3.0/cffr/tests/testthat/test-assertions.R | 1 cffr-1.3.0/cffr/tests/testthat/test-cff.R | 1 cffr-1.3.0/cffr/tests/testthat/test-cff_create.R | 1131 +- cffr-1.3.0/cffr/tests/testthat/test-cff_read.R | 505 - cffr-1.3.0/cffr/tests/testthat/test-cff_validate.R | 1 cffr-1.3.0/cffr/tests/testthat/test-cff_write.R | 401 - cffr-1.3.0/cffr/tests/testthat/test-cff_write_misc.R | 273 cffr-1.3.0/cffr/tests/testthat/test-deprecated.R | 1 cffr-1.3.0/cffr/tests/testthat/test-methods.R | 1 cffr-1.3.0/cffr/tests/testthat/test-mock-package.R | 266 cffr-1.3.0/cffr/tests/testthat/test-utils-cff_create.R | 44 cffr-1.3.0/cffr/tests/testthat/test-utils-create.R | 74 cffr-1.3.0/cffr/tests/testthat/test-utils-persons.R | 3 cffr-1.3.0/cffr/tests/testthat/test-utils.R | 84 cffr-1.3.0/cffr/tests/testthat/test-xtra-check-bibtex-ruby.R | 1 cffr-1.3.0/cffr/vignettes/REFERENCES.bib | 104 cffr-1.3.0/cffr/vignettes/bibtex-cff.qmd |only cffr-1.3.0/cffr/vignettes/cffr.qmd |only cffr-1.3.0/cffr/vignettes/joss-paper.qmd |only cffr-1.3.0/cffr/vignettes/r-cff.qmd |only 107 files changed, 10214 insertions(+), 10906 deletions(-)
Title: Calculate High Resolution Water Balance of Starch Potatoes
Description: Calculates the water balance of starch potatoes from Normalized Distance Vegetation Index (NDVI) images, German Weather Service (DWD) reference evapotranspiration, German Weather Service RADOLAN precipitation data and irrigation information. For more details see Piernicke et al. (2025) <doi:10.3390/rs17183227>.
Author: Thomas Piernicke [aut, cre]
Maintainer: Thomas Piernicke <thomasp@gfz.de>
Diff between WaterBalanceR versions 0.1.20 dated 2026-03-11 and 0.1.21 dated 2026-03-13
DESCRIPTION | 6 MD5 | 12 NEWS.md | 424 ++++++++++++++++---------------- R/DownloadSentinel2.R | 2 inst/doc/WaterBalanceR_DataSources.html | 4 inst/doc/WaterBalanceR_Workflow.html | 6 man/DownloadSentinel2.Rd | 2 7 files changed, 232 insertions(+), 224 deletions(-)
Title: Spatial Absorbing Markov Chains
Description: Implements functions for working with absorbing Markov chains. The
implementation is based on the framework described in "Toward a unified
framework for connectivity that disentangles movement and mortality in space
and time" by Fletcher et al. (2019) <doi:10.1111/ele.13333>, which applies
them to spatial ecology. This framework incorporates both resistance and
absorption with spatial absorbing Markov chains (SAMC) to provide several
short-term and long-term predictions for metrics related to connectivity in
landscapes. Despite the ecological context of the framework, this package
can be used in any application of absorbing Markov chains.
Author: Andrew Marx [aut, cre, cph] ,
Robert Fletcher [ctb] ,
Miguel Acevedo [ctb] ,
Jorge Sefair [ctb] ,
Chao Wang [ctb] ,
Hughes Josie [ctb] ,
Barrett Griffin [ctb]
Maintainer: Andrew Marx <ajm.rpackages@gmail.com>
Diff between samc versions 4.1.0 dated 2026-02-05 and 4.2.1 dated 2026-03-13
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NEWS.md | 7 +++++++ R/internal-functions.R | 40 +++++++++++++++++++++++++++++++--------- R/internal-validation.R | 31 +++++++++++++++++++++++-------- R/pairwise.R | 36 ++++++++++++++++++++++++++---------- R/samc.R | 11 +++++++---- inst/CITATION | 2 +- inst/doc/overview.html | 4 ++-- 9 files changed, 109 insertions(+), 46 deletions(-)
Title: Import Various Northern and Southern Hemisphere Climate Indices
Description: Downloads Southern Oscillation Index, Oceanic Nino
Index, North Pacific Gyre Oscillation data, North Atlantic Oscillation
and Arctic Oscillation. Data sources are described in the help files for each function.
Author: Sam Albers [aut, cre],
Elio Campitelli [ctb]
Maintainer: Sam Albers <sam.albers@gmail.com>
Diff between rsoi versions 0.5.7 dated 2026-03-06 and 0.5.8 dated 2026-03-13
DESCRIPTION | 6 +- MD5 | 7 +-- NEWS.md | 3 + R/download-roni.R | 75 ++++++++++-------------------------- tests/testthat/test-download-roni.R |only 5 files changed, 32 insertions(+), 59 deletions(-)
Title: Polytomous Variable Latent Class Analysis Parallel
Description: A 'C++' reimplementation of 'poLCA' - latent class analysis and
latent class regression models for polytomous outcome variables, also known
as latent structure analysis. It attempts to reproduce results and be as
similar as possible to the original code, while running faster, especially
with multiple repetitions, by utilising multiple threads. Further reading is
available on the Queen Mary, University of London, IT Services Research blog
<https://blog.hpc.qmul.ac.uk/speeding_up_r_packages/>.
Author: Sherman Lo [aut, cre],
Drew Linzer [aut],
Jeffrey Lewis. [aut]
Maintainer: Sherman Lo <s.lo@qmul.ac.uk>
This is a re-admission after prior archival of version 1.2.6 dated 2026-02-19
Diff between poLCAParallel versions 1.2.6 dated 2026-02-19 and 1.2.7 dated 2026-03-13
DESCRIPTION | 9 +++--- MD5 | 28 ++++++++++---------- src/blrt.cc | 10 +++++-- src/blrt_rcpp.cc | 9 +++++- src/em_algorithm_array.cc | 10 +++++-- src/em_algorithm_rcpp.cc | 16 +++++++---- src/em_algorithm_regress.cc | 61 ++++++++++++++++++-------------------------- src/em_algorithm_regress.h | 40 +++++++++++++++++++++++----- src/goodness_fit_rcpp.cc | 7 +++-- src/polca_rcpp.cc | 14 +++++----- src/regularised_error.cc | 6 ++-- src/standard_error_rcpp.cc | 14 ++++++---- src/util.cc | 7 +++++ src/util.h | 5 +++ src/util_rcpp.cc |only src/util_rcpp.h |only 16 files changed, 146 insertions(+), 90 deletions(-)
Title: Generalized Network-Based Dimensionality Reduction and Analysis
Description: Non-parametric dimensionality reduction function. Reduction with and without feature selection. Plot functions. Automated feature selections. Kosztyan et. al. (2024) <doi:10.1016/j.eswa.2023.121779>.
Author: Zsolt T. Kosztyan [aut, cre],
Marcell T. Kurbucz [aut],
Attila I. Katona [aut],
Zahid Khan [aut]
Maintainer: Zsolt T. Kosztyan <kosztyan.zsolt@gtk.uni-pannon.hu>
Diff between nda versions 0.2.4 dated 2025-02-16 and 0.2.5 dated 2026-03-13
DESCRIPTION | 6 MD5 | 8 R/ndrlm.R | 1224 +++++++++++++++++++++++++++++------------------------------ inst/NEWS | 222 +++++----- man/ndrlm.Rd | 354 ++++++++--------- 5 files changed, 911 insertions(+), 903 deletions(-)
Title: Missing Morphometric Data Simulation and Estimation
Description: Functions for simulating missing morphometric
data randomly, with taxonomic bias and with anatomical bias. LOST also
includes functions for estimating linear and geometric morphometric data.
Author: J. Arbour [aut, cre],
C. Brown [aut]
Maintainer: J. Arbour <jessica.arbour@mtsu.edu>
Diff between LOST versions 2.1.2 dated 2025-01-27 and 2.1.3 dated 2026-03-13
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- R/align.missing.R | 6 +++++- 3 files changed, 11 insertions(+), 7 deletions(-)
Title: An R Interface for Downloading, Reading, and Handling IPUMS Data
Description: An easy way to work with census, survey, and geographic data
provided by IPUMS in R. Generate and download data through the IPUMS
API and load IPUMS files into R with their associated metadata to
make analysis easier. IPUMS data describing 1.4 billion individuals
drawn from over 750 censuses and surveys is available free of charge
from the IPUMS website <https://www.ipums.org>.
Author: Greg Freedman Ellis [aut],
Derek Burk [aut, cre],
Finn Roberts [aut],
Joe Grover [ctb],
Dan Ehrlich [ctb],
Renae Rodgers [ctb],
Institute for Social Research and Data Innovation [cph]
Maintainer: Derek Burk <ipums+cran@umn.edu>
Diff between ipumsr versions 0.9.0 dated 2025-06-04 and 0.10.0 dated 2026-03-13
DESCRIPTION | 10 MD5 | 100 NEWS.md | 22 R/api_define_extract.R | 6993 +++++++++++++++----------------- R/api_helpers.R | 15 R/api_metadata.R | 4 R/ddi_read.R | 2363 +++++----- R/micro_read.R | 738 +-- R/micro_read_chunked.R | 734 +-- R/micro_read_yield.R | 668 +-- R/proj_config.R | 1 README.md | 896 ++-- build/vignette.rds |binary inst/doc/ipums-api-agg.R | 438 +- inst/doc/ipums-api-agg.html | 1639 +++---- inst/doc/ipums-api-micro.R | 440 +- inst/doc/ipums-api-micro.Rmd | 2 inst/doc/ipums-api-micro.html | 1807 ++++---- inst/doc/ipums-api.R | 548 +- inst/doc/ipums-api.Rmd | 1 inst/doc/ipums-api.html | 1686 +++---- inst/doc/ipums-bigdata.R | 558 +- inst/doc/ipums-bigdata.Rmd | 1331 +++--- inst/doc/ipums-bigdata.html | 2123 ++++----- inst/doc/ipums-read.R | 274 - inst/doc/ipums-read.html | 1823 ++++---- inst/doc/ipums.R | 172 inst/doc/ipums.Rmd | 1 inst/doc/ipums.html | 1350 +++--- inst/doc/value-labels.R | 348 - inst/doc/value-labels.html | 1891 ++++---- man/define_extract_micro.Rd | 1 man/get_sample_info.Rd | 1 man/ipums_data_collections.Rd | 1 man/ipums_ddi-class.Rd | 2 man/ipums_shape_join.Rd | 2 man/read_ipums_ddi.Rd | 3 man/read_ipums_micro.Rd | 2 man/read_ipums_micro_chunked.Rd | 2 man/read_ipums_micro_yield.Rd | 2 man/read_ipums_sf.Rd | 2 man/set_ipums_api_key.Rd | 15 tests/fixtures/cps_00111.xml |only tests/fixtures/ipumsi_00987.xml |only tests/testthat/helper_api.R | 13 tests/testthat/test_api_helpers.R | 2 tests/testthat/test_read_ddi.R | 25 vignettes/fixtures/wait-for-extract.yml | 166 vignettes/ipums-api-micro.Rmd | 2 vignettes/ipums-api.Rmd | 1 vignettes/ipums-bigdata.Rmd | 1331 +++--- vignettes/ipums.Rmd | 1 52 files changed, 15398 insertions(+), 15152 deletions(-)
Title: Statistical Analysis of Haplotypes with Traits and Covariates
when Linkage Phase is Ambiguous
Description: Routines for the analysis of indirectly measured haplotypes. The statistical methods assume that all subjects are unrelated and that haplotypes are ambiguous (due to unknown linkage phase of the genetic markers). The main functions are: haplo.em(), haplo.glm(), haplo.score(), and haplo.power(); all of which have detailed examples in the vignette.
Author: Schaid Daniel [aut],
Jason P. Sinnwell [aut, cre]
Maintainer: Jason P. Sinnwell <sinnwell.jason@mayo.edu>
Diff between haplo.stats versions 1.9.8.2 dated 2026-02-13 and 1.9.8.3 dated 2026-03-13
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- inst/doc/haplostats.R | 4 ++++ inst/doc/haplostats.Rmd | 4 ++++ vignettes/haplostats.Rmd | 4 ++++ 5 files changed, 20 insertions(+), 8 deletions(-)
Title: Identify Global Objects in R Expressions
Description: Identifies global ("unknown" or "free") objects in R expressions
by code inspection using various strategies (ordered, liberal,
conservative, or deep-first search). The objective of this package is to
make it as simple as possible to identify global objects for the purpose
of exporting them in parallel, distributed compute environments.
Author: Henrik Bengtsson [aut, cre, cph],
Davis Vaughan [ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between globals versions 0.19.0 dated 2026-02-02 and 0.19.1 dated 2026-03-13
DESCRIPTION | 6 MD5 | 34 ++-- NEWS.md | 11 + R/Globals-class.R | 9 + R/call_find_globals_with_dotdotdot.R | 2 R/findGlobalsDFS.R | 3 R/find_globals_ordered.R | 59 ------- R/globalsByName.R | 2 R/utils-debug.R | 2 R/where.R | 2 inst/testme/test-Globals.R | 73 ++++++++- inst/testme/test-cleanup.R | 63 +++++++ inst/testme/test-dotdotdot.R | 18 ++ inst/testme/test-findGlobals,dfs.R | 52 ++++++ inst/testme/test-findGlobals.R | 126 +++++++++++++++ inst/testme/test-globalsByName.R | 19 ++ inst/testme/test-globalsOf.R | 102 ++++++++++++ inst/testme/test-utils.R | 281 +++++++++++++++++++++++++++++++++++ 18 files changed, 776 insertions(+), 88 deletions(-)
Title: Faster Generation of Quantile Quantile Plots with Large Samples
Description: New and faster implementations for quantile quantile plots.
The package also includes a function to prune data for quantile quantile
plots. This can drastically reduce the running time for large samples,
for 100 million samples, you can expect a factor 80X speedup.
Author: Gudmundur Einarsson [aut, cre],
Hafsteinn Einarsson [aut]
Maintainer: Gudmundur Einarsson <gudmundur.einarsson.phd@gmail.com>
Diff between fastqq versions 0.1.3 dated 2022-10-25 and 0.1.4 dated 2026-03-13
DESCRIPTION | 10 +- MD5 | 37 +++++--- NAMESPACE | 2 NEWS.md | 12 ++ R/RcppExports.R | 10 ++ R/qq.R | 129 ++++++++++++++++++++++++++++- README.md | 132 +++++++++++++++++++++++------- man/figures/README-example-1.png |binary man/figures/README-example-2.png |binary man/figures/README-ggplot-1.png |binary man/figures/README-qqchisq1_ex-1.png |only man/figures/README-qqchisq1_extreme-1.png |only man/figures/README-qqlog_ex-1.png |only man/figures/README-qqnorm_ex-1.png |binary man/figures/README-qqplot_ex-1.png |binary man/figures/README-zero_action_ex-1.png |only man/qq.Rd | 12 ++ man/qqchisq1.Rd |only man/qqlog.Rd |only src/RcppExports.cpp | 26 +++++ src/code.cpp | 115 ++++++++++++++++++++++++++ tests |only 22 files changed, 434 insertions(+), 51 deletions(-)
Title: Tools for Choice Model Estimation and Application
Description: Choice models are a widely used technique across numerous scientific disciplines. The Apollo package is a very flexible tool for the estimation and application
of choice models in R. Users are able to write their own
model functions or use a mix of already available ones. Random heterogeneity,
both continuous and discrete and at the level of individuals and
choices, can be incorporated for all models. There is support for both standalone
models and hybrid model structures. Both classical
and Bayesian estimation is available, and multiple discrete
continuous models are covered in addition to discrete choice.
Multi-threading processing is supported for estimation and a large
number of pre and post-estimation routines, including for computing posterior
(individual-level) distributions are available.
For examples, a manual, and a support forum, visit
<https://www.ApolloChoiceModelling.com>. For more information on choice
models see Train, K. (2009) <isbn:978-0-521-74738-7> and [...truncated...]
Author: Stephane Hess [aut, cre],
David Palma [aut],
Thomas Hancock [ctb]
Maintainer: Stephane Hess <S.Hess@leeds.ac.uk>
Diff between apollo versions 0.3.6 dated 2025-09-19 and 0.3.7 dated 2026-03-13
DESCRIPTION | 8 MD5 | 72 ++-- NAMESPACE | 3 R/apollo_classAlloc.R | 3 R/apollo_cnl.R | 3 R/apollo_cnl2.R | 3 R/apollo_deltaMethod.R | 4 R/apollo_el.R | 3 R/apollo_estimate.R | 31 +- R/apollo_estimateHB.R | 62 ++-- R/apollo_firstRow.R | 10 R/apollo_fmnl.R | 3 R/apollo_fnl.R | 3 R/apollo_initialise.R | 2 R/apollo_lcEM.R | 1 R/apollo_lcEM_new.R | 21 - R/apollo_makeCluster.R | 2 R/apollo_mnl.R | 8 R/apollo_modelOutput.R | 31 +- R/apollo_modifyUserDefFunc.R | 19 + R/apollo_nl.R | 3 R/apollo_prediction.R | 4 R/apollo_rrm.R | 1 R/apollo_saveOutput.R | 16 - R/apollo_searchStart.R | 6 R/apollo_speedTest.R | 15 - R/apollo_validateControl.R | 11 R/apollo_validateInputs.R | 4 R/onAttach.R | 5 inst/doc/apollofirstexample.html | 565 +++++++++++++++++++-------------------- man/apollo_estimate.Rd | 2 man/apollo_modelOutput.Rd | 1 man/apollo_prediction.Rd | 1 man/apollo_rrm.Rd | 1 man/apollo_saveOutput.Rd | 2 man/apollo_speedTest.Rd | 2 man/apollo_validateInputs.Rd | 4 37 files changed, 523 insertions(+), 412 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-03-06 1.0.4
2024-02-26 1.0.2
2024-02-26 1.0.3
2022-01-18 1.0.1
2021-11-19 1.0.0
2020-12-14 0.1.1
2020-09-29 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-02-26 1.5.2
2024-01-23 1.5.1
2022-10-17 1.5.0
2022-09-30 1.4.9
2022-09-26 1.4.8
2022-09-04 1.4.7
2022-04-11 1.4.6
2022-01-21 1.4.5
2021-11-08 1.4.4
2021-08-07 1.4.3
2021-06-29 1.4.2
2021-05-15 1.4.1
2021-02-23 1.4.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-03-08 1.0.14
2025-08-18 1.0.13
2024-02-26 1.0.12
2023-08-08 1.0.11
2022-04-19 1.0.10
2022-03-02 1.0.9
2021-12-12 1.0.8
2021-11-15 1.0.7
2021-10-06 1.0.6
2021-08-11 1.0.5
2021-06-29 1.0.4
2021-05-03 1.0.3
2021-03-04 1.0.2
2021-02-23 1.0.1
2021-01-28 1.0.0
Title: Predict with 'tidymodels' Workflows in Databases
Description: Turn 'tidymodels' workflows into objects containing the
sufficient sequential equations to perform predictions. These smaller
objects allow for low dependency prediction locally or directly in
databases.
Author: Emil Hvitfeldt [aut, cre],
Posit Software, PBC [cph, fnd]
Maintainer: Emil Hvitfeldt <emil.hvitfeldt@posit.co>
Diff between orbital versions 0.5.0 dated 2026-02-27 and 0.5.1 dated 2026-03-13
DESCRIPTION | 17 +- MD5 | 152 ++++++++++----------- NAMESPACE | 50 ++++++ NEWS.md | 10 + R/adjust_equivocal_zone.R | 8 - R/adjust_numeric_range.R | 23 +++ R/adjust_predictions_custom.R | 10 + R/adjust_probability_threshold.R | 8 - R/estimate-size.R |only R/model-xgboost.R | 17 ++ R/parsnip.R | 34 +++- R/step_adasyn.R | 5 R/step_bsmote.R | 5 R/step_center.R | 10 + R/step_corr.R | 5 R/step_downsample.R | 5 R/step_dummy.R | 14 + R/step_filter_missing.R | 5 R/step_impute_mean.R | 10 + R/step_impute_median.R | 10 + R/step_indicate_na.R | 12 + R/step_lincomb.R | 5 R/step_log.R | 11 + R/step_mutate.R | 6 R/step_nearmiss.R | 5 R/step_normalize.R | 10 + R/step_nzv.R | 5 R/step_pca.R | 10 + R/step_range.R | 10 + R/step_rm.R | 5 R/step_rose.R | 5 R/step_scale.R | 10 + R/step_select.R | 5 R/step_smote.R | 5 R/step_smotenc.R | 5 R/step_sqrt.R | 10 + R/step_tomek.R | 5 R/step_upsample.R | 5 R/step_zv.R | 5 inst/doc/supported-models.html | 110 +++++++-------- man/estimate_orbital_size.Rd |only tests/testthat/_snaps/estimate-size.md |only tests/testthat/_snaps/sql.md | 29 ---- tests/testthat/derby.log | 6 tests/testthat/test-adjust_equivocal_zone.R | 30 ++++ tests/testthat/test-adjust_numeric_range.R | 53 +++++++ tests/testthat/test-adjust_predictions_custom.R | 38 +++++ tests/testthat/test-adjust_probability_threshold.R | 26 +++ tests/testthat/test-estimate-size.R |only tests/testthat/test-model-xgboost.R | 22 +++ tests/testthat/test-sql.R | 12 - tests/testthat/test-step_adasyn.R | 15 ++ tests/testthat/test-step_bsmote.R | 15 ++ tests/testthat/test-step_center.R | 23 +++ tests/testthat/test-step_corr.R | 11 + tests/testthat/test-step_downsample.R | 15 ++ tests/testthat/test-step_dummy.R | 27 +++ tests/testthat/test-step_filter_missing.R | 11 + tests/testthat/test-step_impute_mean.R | 23 +++ tests/testthat/test-step_impute_median.R | 23 +++ tests/testthat/test-step_indicate_na.R | 23 +++ tests/testthat/test-step_lincomb.R | 11 + tests/testthat/test-step_log.R | 23 +++ tests/testthat/test-step_mutate.R | 23 +++ tests/testthat/test-step_nearmiss.R | 15 ++ tests/testthat/test-step_normalize.R | 23 +++ tests/testthat/test-step_nzv.R | 11 + tests/testthat/test-step_pca.R | 15 ++ tests/testthat/test-step_range.R | 23 +++ tests/testthat/test-step_rm.R | 11 + tests/testthat/test-step_rose.R | 15 ++ tests/testthat/test-step_scale.R | 23 +++ tests/testthat/test-step_select.R | 11 + tests/testthat/test-step_smote.R | 15 ++ tests/testthat/test-step_smotenc.R | 15 ++ tests/testthat/test-step_sqrt.R | 23 +++ tests/testthat/test-step_tomek.R | 15 ++ tests/testthat/test-step_upsample.R | 15 ++ tests/testthat/test-step_zv.R | 11 + 79 files changed, 1152 insertions(+), 190 deletions(-)
Title: Multilevel Functions
Description: Tools used by organizational researchers for the analysis of multilevel data. Includes four broad sets of tools. First, functions for estimating within-group agreement and reliability indices. Second, functions for manipulating multilevel and longitudinal (panel) data. Third, simulations for estimating power and generating multilevel data. Fourth, miscellaneous functions for estimating reliability and performing simple calculations and data transformations.
Author: Paul Bliese [aut, cre],
Gilad Chen [ctb],
Patrick Downes [ctb],
Patrick Flynn [ctb],
Jonas Lang [ctb],
Donald Schepker [ctb]
Maintainer: Paul Bliese <pdbliese@gmail.com>
Diff between multilevel versions 2.7.1 dated 2025-09-08 and 2.8 dated 2026-03-13
DESCRIPTION | 18 ++++++++++-------- MD5 | 13 ++++++++----- R/multilevel.R | 32 +++++++++++++++++++++++++------- data/banddat.rda |only man/banddat.Rd |only man/correct.gcor.Rd |only man/paneldat.Rd | 27 ++++++++++++++++----------- man/rwg.j.Rd | 12 ++++++++---- man/rwg.j.lindell.Rd | 22 +++++++++++++--------- 9 files changed, 80 insertions(+), 44 deletions(-)
Title: Intergovernmental Organizations Database
Description: Tools to extract information from the Intergovernmental
Organizations ('IGO') Database (v3), provided by the Correlates of War
Project <https://correlatesofwar.org/>. See also Pevehouse, J. C. et
al. (2020) <doi:10.1177/0022343319881175>.
Author: Diego Hernangomez [aut, cre, cph] ,
The Correlates of War Project [cph]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between igoR versions 1.0.0 dated 2026-01-17 and 1.0.1 dated 2026-03-13
igoR-1.0.0/igoR/inst/doc/igoR.Rmd |only igoR-1.0.0/igoR/inst/doc/mapping.Rmd |only igoR-1.0.0/igoR/vignettes/AustShared-1.png |only igoR-1.0.0/igoR/vignettes/NAShared-1.png |only igoR-1.0.0/igoR/vignettes/UNMaps-1.png |only igoR-1.0.0/igoR/vignettes/igoR.Rmd |only igoR-1.0.0/igoR/vignettes/mapping.Rmd |only igoR-1.0.1/igoR/DESCRIPTION | 14 igoR-1.0.1/igoR/MD5 | 50 - igoR-1.0.1/igoR/NEWS.md | 5 igoR-1.0.1/igoR/R/sysdata.rda |binary igoR-1.0.1/igoR/README.md | 53 - igoR-1.0.1/igoR/build/partial.rdb |binary igoR-1.0.1/igoR/build/vignette.rds |binary igoR-1.0.1/igoR/data/igo_year_format3.rda |binary igoR-1.0.1/igoR/data/state_year_format3.rda |binary igoR-1.0.1/igoR/data/states2016.rda |binary igoR-1.0.1/igoR/inst/CITATION | 73 - igoR-1.0.1/igoR/inst/COPYRIGHTS | 22 igoR-1.0.1/igoR/inst/REFERENCES.bib | 86 - igoR-1.0.1/igoR/inst/WORDLIST | 1 igoR-1.0.1/igoR/inst/doc/igoR.R | 494 ++++++++-- igoR-1.0.1/igoR/inst/doc/igoR.html | 1235 ++++++++++++++----------- igoR-1.0.1/igoR/inst/doc/igoR.qmd |only igoR-1.0.1/igoR/inst/doc/mapping.html | 553 +++-------- igoR-1.0.1/igoR/inst/doc/mapping.qmd |only igoR-1.0.1/igoR/inst/schemaorg.json | 4 igoR-1.0.1/igoR/vignettes/REFERENCES.bib | 86 - igoR-1.0.1/igoR/vignettes/fig-AustShared-1.png |only igoR-1.0.1/igoR/vignettes/fig-NAShared-1.png |only igoR-1.0.1/igoR/vignettes/fig-UNMaps-1.png |only igoR-1.0.1/igoR/vignettes/igoR.qmd |only igoR-1.0.1/igoR/vignettes/mapping.qmd |only 33 files changed, 1524 insertions(+), 1152 deletions(-)
Title: Gaussian and Student-t Copula Models for Count Time Series
Description: Provides likelihood-based inference for Gaussian and Student-t
copula models for univariate count time series. Supports Poisson,
negative binomial, binomial, beta-binomial, and zero-inflated
marginals with ARMA dependence structures. Includes simulation,
maximum-likelihood estimation, residual diagnostics, and predictive
inference. Implements Time Series Minimax Exponential Tilting (TMET)
<doi:10.1016/j.csda.2026.108344>, an adaptation of minimax exponential
tilting of Botev (2017) <doi:10.1111/rssb.12162>. Also provides a
linear-cost implementation of the Geweke–Hajivassiliou–Keane (GHK)
simulator following Masarotto and Varin (2012) <doi:10.1214/12-EJS721>,
and the Continuous Extension (CE) approximation of Nguyen and
De Oliveira (2025) <doi:10.1080/02664763.2025.2498502>. The package
follows the S3 design philosophy of 'gcmr' but is developed independently.
Author: Quynh Nguyen [aut, cre],
Victor De Oliveira [aut]
Maintainer: Quynh Nguyen <nqnhu2209@gmail.com>
Diff between gctsc versions 0.1.3 dated 2025-12-17 and 0.2.0 dated 2026-03-13
gctsc-0.1.3/gctsc/R/copula-utils.R |only gctsc-0.1.3/gctsc/R/core_utils.R |only gctsc-0.1.3/gctsc/R/loglik_vmet.R |only gctsc-0.1.3/gctsc/data/campyl.csv |only gctsc-0.1.3/gctsc/inst/CITATION |only gctsc-0.1.3/gctsc/inst/examples |only gctsc-0.1.3/gctsc/man/pmvn_ce.Rd |only gctsc-0.1.3/gctsc/man/pmvn_ghk.Rd |only gctsc-0.1.3/gctsc/man/pmvn_tmet.Rd |only gctsc-0.1.3/gctsc/src/gctsc_dummy.cpp |only gctsc-0.1.3/gctsc/src/lnNpr.cpp |only gctsc-0.1.3/gctsc/src/mvnkernel.cpp |only gctsc-0.1.3/gctsc/src/predmvn.cpp |only gctsc-0.2.0/gctsc/DESCRIPTION | 34 - gctsc-0.2.0/gctsc/LICENSE | 2 gctsc-0.2.0/gctsc/MD5 | 154 ++-- gctsc-0.2.0/gctsc/NAMESPACE | 11 gctsc-0.2.0/gctsc/R/RcppExports.R | 46 + gctsc-0.2.0/gctsc/R/arma-helpers.R | 187 +++-- gctsc-0.2.0/gctsc/R/cond_mv.R |only gctsc-0.2.0/gctsc/R/cormat.R | 46 + gctsc-0.2.0/gctsc/R/data.R | 9 gctsc-0.2.0/gctsc/R/grad_jac_prod.R |only gctsc-0.2.0/gctsc/R/import.R | 7 gctsc-0.2.0/gctsc/R/loglik_ce.R | 273 +++++--- gctsc-0.2.0/gctsc/R/loglik_factory.R | 70 +- gctsc-0.2.0/gctsc/R/loglik_ghk.R | 315 ++++++---- gctsc-0.2.0/gctsc/R/loglik_tmet.R | 500 ++++++++------- gctsc-0.2.0/gctsc/R/main.R | 330 ++++++---- gctsc-0.2.0/gctsc/R/marg_utils.R | 17 gctsc-0.2.0/gctsc/R/marginals.R | 32 - gctsc-0.2.0/gctsc/R/methods-print.R | 36 - gctsc-0.2.0/gctsc/R/prediction.R | 317 ++++++---- gctsc-0.2.0/gctsc/R/residuals.R | 308 ++++++--- gctsc-0.2.0/gctsc/R/sample_utils.R |only gctsc-0.2.0/gctsc/R/sim-utils.R | 142 +++- gctsc-0.2.0/gctsc/R/simulate-gctsc.R | 272 ++++---- gctsc-0.2.0/gctsc/R/tmet_t_solver.R |only gctsc-0.2.0/gctsc/R/validate-utils.R | 75 +- gctsc-0.2.0/gctsc/README.md | 117 +++ gctsc-0.2.0/gctsc/build/vignette.rds |binary gctsc-0.2.0/gctsc/data/KCWC.rda |binary gctsc-0.2.0/gctsc/data/campyl.rda |binary gctsc-0.2.0/gctsc/data/datalist | 1 gctsc-0.2.0/gctsc/data/rota.csv |only gctsc-0.2.0/gctsc/data/rota.rda |only gctsc-0.2.0/gctsc/inst/Gaussian_copula_examples |only gctsc-0.2.0/gctsc/inst/doc/gctsc_vignette.R | 104 ++- gctsc-0.2.0/gctsc/inst/doc/gctsc_vignette.Rmd | 201 ++++-- gctsc-0.2.0/gctsc/inst/doc/gctsc_vignette.html | 755 +++++++++++++----------- gctsc-0.2.0/gctsc/inst/t_copula_examples |only gctsc-0.2.0/gctsc/man/KCWC.Rd | 32 - gctsc-0.2.0/gctsc/man/arma.cormat.Rd | 41 - gctsc-0.2.0/gctsc/man/coef.gctsc.Rd | 39 - gctsc-0.2.0/gctsc/man/gctsc.Rd | 309 +++++---- gctsc-0.2.0/gctsc/man/gctsc.opts.Rd | 54 - gctsc-0.2.0/gctsc/man/marginal.gctsc.Rd | 156 ++-- gctsc-0.2.0/gctsc/man/plot.gctsc.Rd | 156 ++-- gctsc-0.2.0/gctsc/man/pmv_ce.Rd |only gctsc-0.2.0/gctsc/man/pmv_ghk.Rd |only gctsc-0.2.0/gctsc/man/pmv_tmet.Rd |only gctsc-0.2.0/gctsc/man/predict.gctsc.Rd | 137 +++- gctsc-0.2.0/gctsc/man/print.gctsc.Rd | 40 - gctsc-0.2.0/gctsc/man/print.summary.gctsc.Rd | 40 - gctsc-0.2.0/gctsc/man/residuals.gctsc.Rd | 122 ++- gctsc-0.2.0/gctsc/man/rota.Rd |only gctsc-0.2.0/gctsc/man/sim_gctsc.Rd | 314 ++++++--- gctsc-0.2.0/gctsc/man/summary.gctsc.Rd | 46 - gctsc-0.2.0/gctsc/src/RcppExports.cpp | 120 +++ gctsc-0.2.0/gctsc/src/cond_var.cpp | 5 gctsc-0.2.0/gctsc/src/gauss_utils.cpp | 12 gctsc-0.2.0/gctsc/src/gauss_utils.h | 13 gctsc-0.2.0/gctsc/src/kernel_mvn.cpp |only gctsc-0.2.0/gctsc/src/kernel_mvt.cpp |only gctsc-0.2.0/gctsc/src/lnNpr.h | 9 gctsc-0.2.0/gctsc/src/lnTpr.h |only gctsc-0.2.0/gctsc/src/loglik_ce.cpp | 147 ++++ gctsc-0.2.0/gctsc/src/pred_mvn.cpp |only gctsc-0.2.0/gctsc/src/pred_mvt.cpp |only gctsc-0.2.0/gctsc/src/res_mvn.cpp |only gctsc-0.2.0/gctsc/src/res_mvt.cpp |only gctsc-0.2.0/gctsc/src/sampling_utils.h | 2 gctsc-0.2.0/gctsc/src/t_utils.cpp |only gctsc-0.2.0/gctsc/src/t_utils.h |only gctsc-0.2.0/gctsc/vignettes/gctsc_vignette.Rmd | 201 ++++-- 85 files changed, 4033 insertions(+), 2323 deletions(-)
Title: Efficient Inference on High-Dimensional Linear Model with
Missing Outcomes
Description: A statistically and computationally efficient debiasing method for conducting valid inference on the high-dimensional linear regression function with missing outcomes.
The reference paper is Zhang, Giessing, and Chen (2023) <doi:10.48550/arXiv.2309.06429>.
Author: Yikun Zhang [aut, cre] ,
Alexander Giessing [aut] ,
Yen-Chi Chen [aut]
Maintainer: Yikun Zhang <yikunzhang@foxmail.com>
Diff between DebiasInfer versions 0.2 dated 2023-10-09 and 0.2.1 dated 2026-03-13
DESCRIPTION | 17 +++++++------- MD5 | 12 +++++----- R/DebiasProg.R | 61 ++++++++++++++++++++++++++++++++-------------------- R/DebiasProgCV.R | 22 +++++++++++++++--- build/partial.rdb |binary man/DebiasProg.Rd | 5 ++-- man/DebiasProgCV.Rd | 5 ++-- 7 files changed, 77 insertions(+), 45 deletions(-)