Title: An Extension of 'Tidymodels' Supporting Offset Terms
Description: Extend the 'tidymodels' ecosystem <https://www.tidymodels.org/> to
enable the creation of predictive models with offset terms. Models with
offsets are most useful when working with count data or when fitting an
adjustment model on top of an existing model with a prior expectation.
The former situation is common in insurance where data is often weighted by
exposures. The latter is common in life insurance where industry mortality
tables are often used as a starting point for setting assumptions.
Author: Matt Heaphy [aut, cre, cph]
Maintainer: Matt Heaphy <mattrmattrs@gmail.com>
Diff between offsetreg versions 1.1.1 dated 2025-03-02 and 1.2.0 dated 2026-03-22
DESCRIPTION | 13 MD5 | 48 +-- NEWS.md | 6 R/boost_tree_data.R | 20 - R/boost_tree_offset.R | 84 +++--- R/decision_tree_data.R | 10 R/decision_tree_exposure.R | 49 ++- R/glm.R | 187 +++++++------ R/glmnet.R | 156 ++++++----- R/poisson_reg_data.R | 29 +- R/poisson_reg_offset.R | 47 ++- R/rpart.R | 180 +++++++------ R/us_deaths.R | 50 +-- R/xgboost.R | 563 ++++++++++++++++++++++-------------------- build/vignette.rds |binary inst/doc/usage.html | 23 - man/glm_offset.Rd | 13 man/glmnet_offset.Rd | 5 man/rpart_exposure.Rd | 7 man/us_deaths.Rd | 68 ++--- man/xgb_train_offset.Rd | 13 tests/testthat.R | 26 - tests/testthat/test-poisson.R | 161 ++++++++---- tests/testthat/test-rpart.R | 125 +++++---- tests/testthat/test-xgboost.R | 190 ++++++++------ 25 files changed, 1165 insertions(+), 908 deletions(-)
Title: Tools and Statistical Procedures in Plant Science
Description: The 'inti' package is part of the 'inkaverse' project for developing
different procedures and tools used in plant science and experimental designs.
The mean aim of the package is to support researchers during the planning of
experiments and data collection (tarpuy()), data analysis and graphics (yupana())
, and scientific writing.
Learn more about the 'inkaverse' project at <https://inkaverse.com/>.
Author: Flavio Lozano-Isla [aut, cre] ,
Maria Belen Kistner [ctb] ,
QuipoLab [ctb],
Inkaverse [cph]
Maintainer: Flavio Lozano-Isla <flozanoisla@gmail.com>
Diff between inti versions 0.6.91 dated 2026-01-10 and 0.6.92 dated 2026-03-22
DESCRIPTION | 6 +- MD5 | 20 ++++--- NEWS.md | 10 +++ R/utils.R | 28 +++++++--- build/partial.rdb |binary build/vignette.rds |binary inst/doc/apps.html | 2 inst/extdata/_extensions/scihub/ReadMe.qmd | 70 +++------------------------ inst/extdata/_extensions/scihub/analysis.qmd | 5 - inst/extdata/_extensions/scihub/article.qmd | 16 ++++++ inst/extdata/_extensions/scihub/article.zp |only inst/extdata/_extensions/scihub/scihub.proj |only 12 files changed, 70 insertions(+), 87 deletions(-)
Title: Extended Two-Way Fixed Effects
Description: Convenience functions for implementing extended two-way
fixed effect regressions a la Wooldridge (2023, 2025)
<doi:10.1093/ectj/utad016>, <doi:10.1007/s00181-025-02807-z>.
Author: Grant McDermott [aut, cre] ,
Frederic Kluser [ctb],
Ulrich Morawetz [ctb]
Maintainer: Grant McDermott <contact@grantmcdermott.com>
Diff between etwfe versions 0.6.1 dated 2026-03-16 and 0.6.2 dated 2026-03-22
DESCRIPTION | 8 - MD5 | 8 - NEWS.md | 6 + inst/doc/etwfe.html | 242 ++++++++++++++++++++++----------------------- inst/tinytest/test_etwfe.R | 18 ++- 5 files changed, 149 insertions(+), 133 deletions(-)
Title: Interact with 'Condor' from R via SSH
Description: Interact with 'Condor' from R via SSH connection. Files are first
uploaded from user machine to submitter machine, and the job is then submitted
from the submitter machine to 'Condor'. Functions are provided to submit,
list, and download 'Condor' jobs from R. 'Condor' is an open source
high-throughput computing software framework for distributed parallelization
of computationally intensive tasks.
Author: Arni Magnusson [aut, cre],
Nan Yao [aut],
Jemery Day [ctb],
Thomas Teears [ctb]
Maintainer: Arni Magnusson <thisisarni@gmail.com>
Diff between condor versions 3.0.1 dated 2025-09-22 and 3.0.2 dated 2026-03-22
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- NEWS.md | 8 ++++++++ R/condor_download.R | 8 ++++---- 4 files changed, 19 insertions(+), 11 deletions(-)
Title: Execute and View Data Quality Checks on OMOP CDM Database
Description: Assesses data quality in Observational Medical Outcomes Partnership Common Data Model (OMOP CDM) databases. Executes data quality checks and provides an R 'shiny' application to view the results.
Author: Katy Sadowski [aut, cre],
Clair Blacketer [aut],
Maxim Moinat [aut],
Ajit Londhe [aut],
Anthony Sena [aut],
Anthony Molinaro [aut],
Frank DeFalco [aut],
Pavel Grafkin [aut]
Maintainer: Katy Sadowski <sadowski@ohdsi.org>
Diff between DataQualityDashboard versions 2.8.6 dated 2026-01-28 and 2.8.7 dated 2026-03-22
DESCRIPTION | 10 +++++----- MD5 | 30 +++++++++++++++--------------- NEWS.md | 4 ++++ R/calculateNotApplicableStatus.R | 23 +++++++++++++++++++++-- README.md | 8 +++++++- inst/csv/OMOP_CDMv5.2_Concept_Level.csv | 4 ++-- inst/csv/OMOP_CDMv5.3_Concept_Level.csv | 4 ++-- inst/csv/OMOP_CDMv5.4_Concept_Level.csv | 4 ++-- inst/doc/AddNewCheck.html | 2 +- inst/doc/CheckStatusDefinitions.html | 2 +- inst/doc/DataQualityDashboard.html | 6 +++++- inst/doc/DataQualityDashboard.rmd | 8 ++++++++ inst/doc/DqdForCohorts.html | 2 +- inst/doc/SqlOnly.html | 2 +- inst/doc/Thresholds.html | 2 +- vignettes/DataQualityDashboard.rmd | 8 ++++++++ 16 files changed, 84 insertions(+), 35 deletions(-)
More information about DataQualityDashboard at CRAN
Permanent link
Title: Parametric Time-to-Event Analysis with Variable Incubation
Phases
Description: Fit parametric models for time-to-event data that show an initial
'incubation period', i.e., a variable delay phase where no events occur.
The delayed Weibull distribution serves as the foundational data model.
For parameter estimation, different flavours of maximum likelihood
estimation ('MLE') and the method of maximum product of spacings estimation
('MPSE') are implemented. Bootstrap confidence intervals for parameters and
significance tests in a two group setting are provided.
Author: Matthias Kuhn [aut, cre, cph]
Maintainer: Matthias Kuhn <matthias.kuhn@tu-dresden.de>
Diff between incubate versions 1.3.0 dated 2024-08-16 and 1.4.0 dated 2026-03-22
incubate-1.3.0/incubate/data/publication_examples.rda |only incubate-1.3.0/incubate/inst/scripts/MLEw_weights.RData |only incubate-1.3.0/incubate/inst/scripts/simRes_test_2023-09-08-15h24m35s.rds |only incubate-1.3.0/incubate/inst/scripts/simRes_test_OUT.rds |only incubate-1.3.0/incubate/man/minObjFunPORT.Rd |only incubate-1.3.0/incubate/man/publication_examples.Rd |only incubate-1.4.0/incubate/DESCRIPTION | 43 incubate-1.4.0/incubate/MD5 | 120 incubate-1.4.0/incubate/NAMESPACE | 6 incubate-1.4.0/incubate/NEWS.md | 24 incubate-1.4.0/incubate/R/aaa.R |only incubate-1.4.0/incubate/R/cpp11.R |only incubate-1.4.0/incubate/R/data.R | 110 incubate-1.4.0/incubate/R/delay.R | 1631 +++- incubate-1.4.0/incubate/R/delay_estimation.R | 4062 +++++++--- incubate-1.4.0/incubate/R/delay_test.R | 2263 ++++- incubate-1.4.0/incubate/R/incubate-package.R | 5 incubate-1.4.0/incubate/R/integration.R |only incubate-1.4.0/incubate/R/sysdata.rda |binary incubate-1.4.0/incubate/R/utils.R | 461 + incubate-1.4.0/incubate/R/zzz.R |only incubate-1.4.0/incubate/README.md | 45 incubate-1.4.0/incubate/build |only incubate-1.4.0/incubate/data/fatigue.rda |binary incubate-1.4.0/incubate/data/graphite.rda |only incubate-1.4.0/incubate/data/long2017.rda |only incubate-1.4.0/incubate/data/measles_sailer.rda |only incubate-1.4.0/incubate/data/pollution.rda |binary incubate-1.4.0/incubate/data/rockette.rda |only incubate-1.4.0/incubate/data/rockette74.rda |only incubate-1.4.0/incubate/data/susquehanna.rda |binary incubate-1.4.0/incubate/inst/WORDLIST |only incubate-1.4.0/incubate/inst/doc |only incubate-1.4.0/incubate/inst/scripts/gather_results.R | 421 - incubate-1.4.0/incubate/inst/scripts/simul_MLEweights.R |only incubate-1.4.0/incubate/inst/scripts/simul_bootstrap.R | 134 incubate-1.4.0/incubate/inst/scripts/simul_confint.R | 664 + incubate-1.4.0/incubate/inst/scripts/simul_estim.R |only incubate-1.4.0/incubate/inst/scripts/simul_test.R | 845 +- incubate-1.4.0/incubate/inst/scripts/test_GOF_ad_pval.R |only incubate-1.4.0/incubate/man/DelayedExponential.Rd | 24 incubate-1.4.0/incubate/man/DelayedWeibull.Rd | 30 incubate-1.4.0/incubate/man/as_percent.Rd | 2 incubate-1.4.0/incubate/man/buildControl.Rd |only incubate-1.4.0/incubate/man/buildDist.Rd |only incubate-1.4.0/incubate/man/coef.incubate_fit.Rd | 8 incubate-1.4.0/incubate/man/delay_model.Rd | 64 incubate-1.4.0/incubate/man/estimRoundingError.Rd | 8 incubate-1.4.0/incubate/man/figures/README-example_fit-1.png |binary incubate-1.4.0/incubate/man/figures/README-example_inf-1.png |binary incubate-1.4.0/incubate/man/getDist.Rd | 12 incubate-1.4.0/incubate/man/lines.incubate_fit.Rd |only incubate-1.4.0/incubate/man/logLik.incubate_fit.Rd |only incubate-1.4.0/incubate/man/long2017.Rd |only incubate-1.4.0/incubate/man/measles_sailer.Rd |only incubate-1.4.0/incubate/man/minObjFunAlt.Rd |only incubate-1.4.0/incubate/man/near.Rd |only incubate-1.4.0/incubate/man/objFunFactory.Rd | 35 incubate-1.4.0/incubate/man/plot.incubate_fit.Rd |only incubate-1.4.0/incubate/man/power_diff.Rd | 132 incubate-1.4.0/incubate/man/prepResponseVar.Rd |only incubate-1.4.0/incubate/man/rockette74.Rd |only incubate-1.4.0/incubate/man/scalePars.Rd | 2 incubate-1.4.0/incubate/man/stankovic.Rd | 6 incubate-1.4.0/incubate/man/test_GOF.Rd | 24 incubate-1.4.0/incubate/man/test_diff.Rd | 69 incubate-1.4.0/incubate/man/transform.incubate_fit.Rd | 19 incubate-1.4.0/incubate/man/update.incubate_fit.Rd | 7 incubate-1.4.0/incubate/man/w1Fint.Rd |only incubate-1.4.0/incubate/man/w2Fint.Rd |only incubate-1.4.0/incubate/man/w3FFint.Rd |only incubate-1.4.0/incubate/src |only incubate-1.4.0/incubate/tests/spelling.R |only incubate-1.4.0/incubate/tests/testthat/test-delay.R | 1028 ++ incubate-1.4.0/incubate/tests/testthat/test-delay_estimation.R | 3296 ++++++-- incubate-1.4.0/incubate/tests/testthat/test-delay_test.R | 762 + incubate-1.4.0/incubate/tests/testthat/test-utils.R | 484 + incubate-1.4.0/incubate/vignettes |only 78 files changed, 13349 insertions(+), 3497 deletions(-)
Title: Assessment Tools for Regression Models with Discrete and
Semicontinuous Outcomes
Description: Provides assessment tools for regression models with discrete and semicontinuous outcomes proposed in Yang (2021) <doi:10.1080/10618600.2021.1910042>, Yang (2024) <doi:10.1080/10618600.2024.2303336>, Yang (2024) <doi:10.1093/biomtc/ujae007>, and Yang (2026) <doi:10.1002/cjs.70046>. It calculates the double probability integral transform (DPIT) residuals. It also constructs QQ plots of residuals the ordered curve for assessing mean structures, quasi-empirical distribution function for overall assessment, and a formal goodness-of-fit test.
Author: Lu Yang [aut],
Jeonghwan Lee [cre, aut]
Maintainer: Jeonghwan Lee <lee03938@umn.edu>
Diff between assessor versions 1.1.1 dated 2025-02-16 and 1.3.0 dated 2026-03-22
assessor-1.1.1/assessor/R/2pm.R |only assessor-1.1.1/assessor/R/Ordered_curve.R |only assessor-1.1.1/assessor/R/binom.R |only assessor-1.1.1/assessor/R/discrete_resid.R |only assessor-1.1.1/assessor/R/logistic.R |only assessor-1.1.1/assessor/R/nb.R |only assessor-1.1.1/assessor/R/pois.R |only assessor-1.1.1/assessor/R/qqplot.R |only assessor-1.1.1/assessor/R/semiconti.R |only assessor-1.1.1/assessor/R/zero_resid.R |only assessor-1.1.1/assessor/R/znb.R |only assessor-1.1.1/assessor/R/zpois.R |only assessor-1.1.1/assessor/man/qqresid.Rd |only assessor-1.1.1/assessor/man/resid_2pm.Rd |only assessor-1.1.1/assessor/man/resid_disc.Rd |only assessor-1.1.1/assessor/man/resid_quasi.Rd |only assessor-1.1.1/assessor/man/resid_semiconti.Rd |only assessor-1.1.1/assessor/man/resid_zeroinfl.Rd |only assessor-1.1.1/assessor/tests |only assessor-1.3.0/assessor/DESCRIPTION | 14 - assessor-1.3.0/assessor/MD5 | 68 ++++--- assessor-1.3.0/assessor/NAMESPACE | 71 ++++++- assessor-1.3.0/assessor/R/LGPIF.R |only assessor-1.3.0/assessor/R/bballHR.R | 3 assessor-1.3.0/assessor/R/dpit_2pm.R |only assessor-1.3.0/assessor/R/dpit_binomial.R |only assessor-1.3.0/assessor/R/dpit_glm.R |only assessor-1.3.0/assessor/R/dpit_helper.R |only assessor-1.3.0/assessor/R/dpit_main.R |only assessor-1.3.0/assessor/R/dpit_nb.R |only assessor-1.3.0/assessor/R/dpit_ordinal.R |only assessor-1.3.0/assessor/R/dpit_pois.R |only assessor-1.3.0/assessor/R/dpit_tobit.R |only assessor-1.3.0/assessor/R/dpit_tweedie.R |only assessor-1.3.0/assessor/R/dpit_zeroinfl.R |only assessor-1.3.0/assessor/R/dpit_znb.R |only assessor-1.3.0/assessor/R/dpit_zpois.R |only assessor-1.3.0/assessor/R/gof_calc.R |only assessor-1.3.0/assessor/R/gof_main.R |only assessor-1.3.0/assessor/R/ord_curve.R |only assessor-1.3.0/assessor/R/quasi.R | 171 ++++++++++++++---- assessor-1.3.0/assessor/R/quasi_func.R | 226 ++++++++++++++++++------- assessor-1.3.0/assessor/data/LGPIF.rda |only assessor-1.3.0/assessor/man/LGPIF.Rd |only assessor-1.3.0/assessor/man/bballHR.Rd | 3 assessor-1.3.0/assessor/man/dpit.Rd |only assessor-1.3.0/assessor/man/dpit_2pm.Rd |only assessor-1.3.0/assessor/man/dpit_bin.Rd |only assessor-1.3.0/assessor/man/dpit_nb.Rd |only assessor-1.3.0/assessor/man/dpit_ordi.Rd |only assessor-1.3.0/assessor/man/dpit_pois.Rd |only assessor-1.3.0/assessor/man/dpit_tobit.Rd |only assessor-1.3.0/assessor/man/dpit_tweedie.Rd |only assessor-1.3.0/assessor/man/dpit_znb.Rd |only assessor-1.3.0/assessor/man/dpit_zpois.Rd |only assessor-1.3.0/assessor/man/gof_disc.Rd |only assessor-1.3.0/assessor/man/ord_curve.Rd | 12 + assessor-1.3.0/assessor/man/quasi_plot.Rd |only 58 files changed, 422 insertions(+), 146 deletions(-)
Title: Just a Rather Bayesian Evidence Synthesis
Description: Provides a new class of Bayesian meta-analysis models that incorporates a model for internal and external validity bias. In this way, it is possible to combine studies of diverse quality and different types. For example, we can combine the results of randomized control trials (RCTs) with the results of observational studies (OS).
Author: Pablo Emilio Verde [aut, cre]
Maintainer: Pablo Emilio Verde <pabloemilio.verde@hhu.de>
Diff between jarbes versions 2.4.2 dated 2026-02-11 and 2.5.0 dated 2026-03-22
jarbes-2.4.2/jarbes/man/print.bmeta.Rd |only jarbes-2.5.0/jarbes/ChangeLog | 21 + jarbes-2.5.0/jarbes/DESCRIPTION | 8 jarbes-2.5.0/jarbes/MD5 | 89 +++--- jarbes-2.5.0/jarbes/R/b3lmeta.R | 6 jarbes-2.5.0/jarbes/R/bcbnp.R | 6 jarbes-2.5.0/jarbes/R/bcbnp_0.R | 6 jarbes-2.5.0/jarbes/R/bcdpmeta.R | 7 jarbes-2.5.0/jarbes/R/bcmeta.R | 98 ++++--- jarbes-2.5.0/jarbes/R/bcmixmeta.R | 87 +++++- jarbes-2.5.0/jarbes/R/bmeta.R | 365 +++++++++++++++------------ jarbes-2.5.0/jarbes/R/data-documentation.R | 104 +++++++ jarbes-2.5.0/jarbes/R/diagnostic.bcmeta.R | 212 ++++++--------- jarbes-2.5.0/jarbes/R/diagnostic.bmeta.R | 91 ++++-- jarbes-2.5.0/jarbes/R/dpmeta.R | 18 + jarbes-2.5.0/jarbes/R/dpmetareg.R | 6 jarbes-2.5.0/jarbes/R/dpmmeta.R | 6 jarbes-2.5.0/jarbes/R/jarbes-package.R | 6 jarbes-2.5.0/jarbes/R/plot.bcmeta.R | 252 +++++++++++++----- jarbes-2.5.0/jarbes/R/plot.bcmixmeta.R | 341 +++++++++++++------------ jarbes-2.5.0/jarbes/R/plot.bmeta.R | 58 ++-- jarbes-2.5.0/jarbes/R/plot.dpmeta.R | 208 +++++++++++++-- jarbes-2.5.0/jarbes/R/plot_data.R | 277 +++++++++++++++----- jarbes-2.5.0/jarbes/R/summary.bcbnp.R | 4 jarbes-2.5.0/jarbes/R/summary.bcmeta.R | 12 jarbes-2.5.0/jarbes/R/summary.bcmixmeta.R | 4 jarbes-2.5.0/jarbes/R/summary.bmeta.R | 70 +++-- jarbes-2.5.0/jarbes/R/summary.dpmeta.R | 319 +++++++++++++++++++---- jarbes-2.5.0/jarbes/R/summary.hmr.R | 3 jarbes-2.5.0/jarbes/R/summary.metarisk.R | 3 jarbes-2.5.0/jarbes/data/ganzfeld.rda |only jarbes-2.5.0/jarbes/data/stemcells.rda |binary jarbes-2.5.0/jarbes/data/tyge_2011.rda |only jarbes-2.5.0/jarbes/man/ai_distress.Rd | 4 jarbes-2.5.0/jarbes/man/bcmeta.Rd | 33 +- jarbes-2.5.0/jarbes/man/bcmixmeta.Rd | 24 + jarbes-2.5.0/jarbes/man/bmeta.Rd | 56 +--- jarbes-2.5.0/jarbes/man/diagnostic.bcmeta.Rd | 9 jarbes-2.5.0/jarbes/man/ganzfeld.Rd |only jarbes-2.5.0/jarbes/man/plot.bcmeta.Rd | 45 ++- jarbes-2.5.0/jarbes/man/plot.bcmixmeta.Rd | 48 ++- jarbes-2.5.0/jarbes/man/plot.bmeta.Rd | 4 jarbes-2.5.0/jarbes/man/plot.dpmeta.Rd | 32 ++ jarbes-2.5.0/jarbes/man/plot_data.Rd | 47 ++- jarbes-2.5.0/jarbes/man/stemcells.Rd | 4 jarbes-2.5.0/jarbes/man/summary.bcmeta.Rd | 4 jarbes-2.5.0/jarbes/man/summary.dpmeta.Rd | 21 + jarbes-2.5.0/jarbes/man/tyge_2011.Rd |only 48 files changed, 2078 insertions(+), 940 deletions(-)
Title: Use 'QGIS' Processing Algorithms
Description: Provides seamless access to the 'QGIS'
(<https://qgis.org>) processing toolbox using the standalone
'qgis_process' command-line utility. Both native and third-party
(plugin) processing providers are supported. Beside referring data
sources from file, also common objects from 'sf', 'terra' and 'stars'
are supported. The native processing algorithms are documented by QGIS.org
(2024) <https://docs.qgis.org/latest/en/docs/user_manual/processing_algs/>.
Author: Dewey Dunnington [aut] ,
Floris Vanderhaeghe [aut, cre] ),
Jan Caha [aut] ,
Jannes Muenchow [aut] ,
Antony Barja [ctb] ,
Robin Lovelace [ctb] ,
Jakub Nowosad [ctb] ,
Research Institute for Nature and Forest [cph, fnd]
Maintainer: Floris Vanderhaeghe <floris.vanderhaeghe@inbo.be>
Diff between qgisprocess versions 0.4.1 dated 2024-10-06 and 0.4.2 dated 2026-03-22
DESCRIPTION | 46 +- MD5 | 94 ++--- NEWS.md | 4 R/compat-terra.R | 2 R/qgis-algorithms.R | 64 ++- R/qgis-arguments.R | 9 R/qgis-cache.R | 9 R/qgis-configure.R | 9 R/qgis-function.R | 42 +- R/qgis-plugins.R | 25 - R/qgis-result.R | 4 R/qgis-state.R | 36 -- R/qgisprocess-deprecated.R | 1 README.md | 26 - build/vignette.rds |binary inst/CITATION | 4 inst/doc/options.html | 2 inst/doc/qgis_arguments.R | 4 inst/doc/qgis_arguments.html | 7 inst/doc/qgis_expressions.R | 16 inst/doc/qgis_expressions.html | 9 inst/doc/qgisprocess.R | 66 +-- inst/doc/qgisprocess.html | 526 +++++++++++++------------------ man/as_qgis_argument.Rd | 2 man/qgis_algorithms.Rd | 2 man/qgis_as_raster.Rd | 2 man/qgis_as_terra.Rd | 2 man/qgis_clean_result.Rd | 2 man/qgis_enable_plugins.Rd | 2 man/qgis_extract_output.Rd | 2 man/qgis_function.Rd | 2 man/qgis_path.Rd | 2 man/qgis_result_status.Rd | 2 man/qgis_run.Rd | 2 man/qgis_run_algorithm.Rd | 2 man/qgis_run_algorithm_p.Rd | 2 man/qgis_search_algorithms.Rd | 6 man/qgis_show_help.Rd | 2 man/qgis_using_json_input.Rd | 2 man/st_as_sf.Rd | 2 man/st_as_stars.Rd | 2 tests/testthat/test-compat-terra.R | 13 tests/testthat/test-qgis-algorithms.R | 44 ++ tests/testthat/test-qgis-arguments.R | 1 tests/testthat/test-qgis-configure.R | 5 tests/testthat/test-qgis-plugins.R | 7 tests/testthat/test-qgis-run-algorithm.R | 3 tests/testthat/test-qgis-state.R | 9 48 files changed, 520 insertions(+), 607 deletions(-)
Title: Patient-Reported Outcome Data Analysis with Stan
Description: Estimation for blinding bias in randomized controlled trials with
a latent continuous outcome, a binary response depending on treatment and the
latent outcome, and a noisy surrogate subject to possibly response-dependent
measurement error. Implements EM estimators in R backed by compiled C routines
for models with and without the restriction delta0 = 0, and Bayesian Stan
wrappers for the same two models. Functions were added for latent outcome
models with differential measurement error.
Author: Bin Wang [aut, cre]
Maintainer: Bin Wang <bwang831@gmail.com>
Diff between prome versions 3.1.0.1 dated 2026-02-06 and 4.0.0.3 dated 2026-03-22
prome-3.1.0.1/prome/LICENSE |only prome-3.1.0.1/prome/R/bate.R |only prome-3.1.0.1/prome/R/blindingCPE.R |only prome-3.1.0.1/prome/R/blindingTEST.R |only prome-3.1.0.1/prome/R/crossover2x2.R |only prome-3.1.0.1/prome/R/means.R |only prome-3.1.0.1/prome/R/prome-package.R |only prome-3.1.0.1/prome/R/proportions.R |only prome-3.1.0.1/prome/R/ratio.R |only prome-3.1.0.1/prome/R/stanmodels.R |only prome-3.1.0.1/prome/R/zzz.R |only prome-3.1.0.1/prome/configure |only prome-3.1.0.1/prome/configure.win |only prome-3.1.0.1/prome/data |only prome-3.1.0.1/prome/inst/extdata/ctest.rda |only prome-3.1.0.1/prome/inst/extdata/dtest.rda |only prome-3.1.0.1/prome/inst/extdata/etest.rda |only prome-3.1.0.1/prome/inst/include |only prome-3.1.0.1/prome/inst/stan/ate.stan |only prome-3.1.0.1/prome/inst/stan/ate2m.stan |only prome-3.1.0.1/prome/inst/stan/ate4m.stan |only prome-3.1.0.1/prome/inst/stan/blindlogit.stan |only prome-3.1.0.1/prome/inst/stan/cross0.stan |only prome-3.1.0.1/prome/inst/stan/cross1.stan |only prome-3.1.0.1/prome/inst/stan/hm2mean.stan |only prome-3.1.0.1/prome/inst/stan/hmmean.stan |only prome-3.1.0.1/prome/inst/stan/include |only prome-3.1.0.1/prome/inst/stan/proportion.stan |only prome-3.1.0.1/prome/inst/stan/proportions.stan |only prome-3.1.0.1/prome/inst/stan/zate.stan |only prome-3.1.0.1/prome/man/bate.Rd |only prome-3.1.0.1/prome/man/blindingBI.Rd |only prome-3.1.0.1/prome/man/blindingcpe.Rd |only prome-3.1.0.1/prome/man/blindingdata.Rd |only prome-3.1.0.1/prome/man/blindingtest.Rd |only prome-3.1.0.1/prome/man/data100x3.Rd |only prome-3.1.0.1/prome/man/meanHM.Rd |only prome-3.1.0.1/prome/man/prome-package.Rd |only prome-3.1.0.1/prome/man/propHM.Rd |only prome-3.1.0.1/prome/man/xover.Rd |only prome-3.1.0.1/prome/src/Makevars |only prome-3.1.0.1/prome/src/Makevars.win |only prome-3.1.0.1/prome/src/RcppExports.cpp |only prome-3.1.0.1/prome/src/stanExports_lm.cc |only prome-3.1.0.1/prome/src/stanExports_lm.h |only prome-4.0.0.3/prome/DESCRIPTION | 38 +++++---- prome-4.0.0.3/prome/MD5 | 71 ++++------------- prome-4.0.0.3/prome/NAMESPACE | 31 +------ prome-4.0.0.3/prome/PORTING |only prome-4.0.0.3/prome/R/em.R |only prome-4.0.0.3/prome/R/rctme-package.R |only prome-4.0.0.3/prome/R/stan.R |only prome-4.0.0.3/prome/R/utils.R |only prome-4.0.0.3/prome/inst/extdata/rctme_sim_small.csv |only prome-4.0.0.3/prome/inst/stan/rctme_delta0_fixed.stan |only prome-4.0.0.3/prome/inst/stan/rctme_delta_free.stan |only prome-4.0.0.3/prome/man/blindingMLE.Rd |only prome-4.0.0.3/prome/man/dot-validate_inputs.Rd |only prome-4.0.0.3/prome/man/fit_rctme_em.Rd |only prome-4.0.0.3/prome/man/fit_rctme_em_delta0_fixed.Rd |only prome-4.0.0.3/prome/man/fit_rctme_stan.Rd |only prome-4.0.0.3/prome/man/fit_rctme_stan_delta0_fixed.Rd |only prome-4.0.0.3/prome/man/prome.Rd |only prome-4.0.0.3/prome/man/rctme_stan_file.Rd |only prome-4.0.0.3/prome/man/simulate_rctme_data.Rd |only prome-4.0.0.3/prome/src/rctme_em.c |only 66 files changed, 49 insertions(+), 91 deletions(-)
Title: Model Diagnostics for Accelerated Failure Time Models
Description: A collection of model checking methods for semiparametric
accelerated failure time (AFT) models under the rank-based approach. For the
(computational) efficiency, Gehan's weight is used. It provides functions to
verify whether the observed data fit the specific model assumptions such as
a functional form of each covariate, a link function, and an omnibus test.
The p-value offered in this package is based on the Kolmogorov-type supremum
test and the variance of the proposed test statistics is estimated through
the re-sampling method. Furthermore, a graphical technique to compare the
shape of the observed residual to a number of the approximated realizations
is provided. See the following references; A general model-checking
procedure for semiparametric accelerated failure time models, Statistics and
Computing, 34 (3), 117 <doi:10.1007/s11222-024-10431-7>; Diagnostics for
semiparametric accelerated failure time models with R package 'afttest',
arXiv, <doi:10.48550/arXiv.2511.098 [...truncated...]
Author: Woojung Bae [aut, cre] ,
Dongrak Choi [aut] ,
Jun Yan [aut] ,
Sangwook Kang [aut]
Maintainer: Woojung Bae <matt.woojung@gmail.com>
Diff between afttest versions 4.5.2.2 dated 2026-02-24 and 4.5.3 dated 2026-03-22
afttest-4.5.2.2/afttest/man/export_Surv.Rd |only afttest-4.5.3/afttest/DESCRIPTION | 10 afttest-4.5.3/afttest/MD5 | 26 + afttest-4.5.3/afttest/NAMESPACE | 1 afttest-4.5.3/afttest/R/afttest-package.R |only afttest-4.5.3/afttest/R/afttest.R | 263 ++++++++++--------- afttest-4.5.3/afttest/R/generic.R | 66 ++-- afttest-4.5.3/afttest/inst/examples/ex_afttest.R | 113 +++----- afttest-4.5.3/afttest/man/afttest-package.Rd |only afttest-4.5.3/afttest/man/afttest.Rd | 266 +++++--------------- afttest-4.5.3/afttest/man/afttest.aftgee.Rd |only afttest-4.5.3/afttest/man/afttest.aftsrr.Rd |only afttest-4.5.3/afttest/man/afttest.formula.Rd |only afttest-4.5.3/afttest/man/plot.afttest.Rd | 139 ++++------ afttest-4.5.3/afttest/man/print.afttest.Rd | 125 +++------ afttest-4.5.3/afttest/man/summary.afttest.Rd | 125 +++------ afttest-4.5.3/afttest/tests/testthat/test-afttest.R | 26 - 17 files changed, 485 insertions(+), 675 deletions(-)
Title: Sumerian Cuneiform Text Analysis
Description: Provides functions for converting transliterated Sumerian texts to sign names and cuneiform characters,
creating and querying dictionaries, analyzing the structure of
Sumerian words, and creating translations. Includes a built-in dictionary and supports both
forward lookup (Sumerian to English) and reverse lookup (English to
Sumerian).
Author: Robin Wellmann [aut, cre]
Maintainer: Robin Wellmann <ro.wellmann@gmail.com>
Diff between sumer versions 1.3.0 dated 2026-03-11 and 1.4.0 dated 2026-03-22
sumer-1.3.0/sumer/inst/extdata/enki_and_the_world_order.txt |only sumer-1.4.0/sumer/DESCRIPTION | 6 sumer-1.4.0/sumer/MD5 | 113 sumer-1.4.0/sumer/NAMESPACE | 4 sumer-1.4.0/sumer/R/add_brackets.R | 18 sumer-1.4.0/sumer/R/as.cuneiform.R | 75 sumer-1.4.0/sumer/R/beautify_translations.R | 38 sumer-1.4.0/sumer/R/compose_skeleton_entry.R | 12 sumer-1.4.0/sumer/R/eval_operator.R | 321 + sumer-1.4.0/sumer/R/fill_substr_info.R |only sumer-1.4.0/sumer/R/grammatical_structure.R | 51 sumer-1.4.0/sumer/R/guess_substr_info.R | 11 sumer-1.4.0/sumer/R/info.R | 228 - sumer-1.4.0/sumer/R/merge_dictionaries.R |only sumer-1.4.0/sumer/R/read_translated_text.R | 151 sumer-1.4.0/sumer/R/sign_grammar.R | 227 - sumer-1.4.0/sumer/R/skeleton.R | 161 sumer-1.4.0/sumer/R/split_sumerian.R | 26 sumer-1.4.0/sumer/R/translate.R | 2143 ++++++------ sumer-1.4.0/sumer/R/translate_line.R |only sumer-1.4.0/sumer/R/translation_context.R |only sumer-1.4.0/sumer/inst/doc/getting-started.R | 120 sumer-1.4.0/sumer/inst/doc/getting-started.Rmd | 457 +- sumer-1.4.0/sumer/inst/doc/getting-started.html | 1006 ++++- sumer-1.4.0/sumer/inst/doc/translating-texts.R | 86 sumer-1.4.0/sumer/inst/doc/translating-texts.Rmd | 321 - sumer-1.4.0/sumer/inst/doc/translating-texts.html | 802 ++-- sumer-1.4.0/sumer/inst/extdata/grammatical_structure.png |only sumer-1.4.0/sumer/inst/extdata/project |only sumer-1.4.0/sumer/man/add_brackets.Rd | 131 sumer-1.4.0/sumer/man/as.cuneiform.Rd | 146 sumer-1.4.0/sumer/man/compose_skeleton_entry.Rd | 8 sumer-1.4.0/sumer/man/fill_substr_info.Rd |only sumer-1.4.0/sumer/man/grammatical_structure.Rd | 21 sumer-1.4.0/sumer/man/guess_substr_info.Rd | 123 sumer-1.4.0/sumer/man/info.Rd | 198 - sumer-1.4.0/sumer/man/make_dictionary.Rd | 184 - sumer-1.4.0/sumer/man/mark_ngrams.Rd | 135 sumer-1.4.0/sumer/man/merge_dictionaries.Rd |only sumer-1.4.0/sumer/man/ngram_frequencies.Rd | 160 sumer-1.4.0/sumer/man/plot_sign_grammar.Rd | 3 sumer-1.4.0/sumer/man/read_translated_text.Rd | 214 - sumer-1.4.0/sumer/man/split_sumerian.Rd | 8 sumer-1.4.0/sumer/man/translate.Rd | 174 sumer-1.4.0/sumer/man/translate_line.Rd |only sumer-1.4.0/sumer/vignettes/getting-started.Rmd | 457 +- sumer-1.4.0/sumer/vignettes/translating-texts.Rmd | 321 - 47 files changed, 5157 insertions(+), 3503 deletions(-)
Title: Efficient and Publishing-Oriented Workflow for Psychological
Science
Description: The main goal of the psycho package is to provide tools for psychologists, neuropsychologists and neuroscientists,
to facilitate and speed up the time spent on data analysis. It aims at supporting best practices and tools to format the output
of statistical methods to directly paste them into a manuscript, ensuring statistical reporting standardization and conformity.
Author: Dominique Makowski [aut, cre, cph] ,
Hugo Najberg [ctb],
Viliam Simko [ctb],
Sasha Epskamp [rev]
Maintainer: Dominique Makowski <dom.makowski@gmail.com>
Diff between psycho versions 0.6.1 dated 2021-01-19 and 0.6.2 dated 2026-03-22
DESCRIPTION | 12 - MD5 | 52 +++--- R/crawford.test.R | 99 ++++++------ R/dprime.R | 69 +++++--- R/miscellaneous.R | 4 R/psychobject.R | 6 README.md | 4 build/vignette.rds |binary inst/doc/bayesian.html | 79 ++------- inst/doc/overview.R | 20 +- inst/doc/overview.Rmd | 2 inst/doc/overview.html | 311 ++++++++++++++++++++------------------ man/affective.Rd | 52 +++--- man/assess.Rd | 144 ++++++++--------- man/crawford.test.Rd | 144 ++++++++--------- man/crawford.test.freq.Rd | 58 +++---- man/crawford_dissociation.test.Rd | 90 +++++----- man/dprime.Rd | 152 +++++++++--------- man/emotion.Rd | 58 +++---- man/find_combinations.formula.Rd | 72 ++++---- man/find_matching_string.Rd | 58 +++---- man/find_season.Rd | 86 +++++----- man/is.standardized.Rd | 64 +++---- man/mellenbergh.test.Rd | 60 +++---- man/power_analysis.Rd | 126 +++++++-------- man/summary.psychobject.Rd | 42 ++--- vignettes/overview.Rmd | 2 27 files changed, 938 insertions(+), 928 deletions(-)
Title: Large Language Model (LLM) Tools for Psychological Text Analysis
Description: A collection of large language model (LLM) text analysis methods
designed with psychological data in mind. Currently, LLMing (aka "lemming")
includes a text anomaly detection method based on the angle-based subspace
approach described by Zhang, Lin, and Karim (2015) and a text generation method.
<doi:10.1016/j.ress.2015.05.025>.
Author: Lindley Slipetz [aut, cre],
Teague Henry [aut],
Siqi Sun [ctb]
Maintainer: Lindley Slipetz <ddj6tu@virginia.edu>
Diff between LLMing versions 1.1.0 dated 2026-01-08 and 1.2.0 dated 2026-03-22
DESCRIPTION | 12 - MD5 | 22 - NAMESPACE | 26 +- NEWS.md | 4 R/embed.R | 580 +++++++++++++++++++++++++++++++++++++++++++++++----- R/text_datagen.R | 32 +- R/textanomaly.R | 52 ++-- README.md | 53 ---- build/partial.rdb |binary man/embed.Rd | 100 ++++++-- man/text_datagen.Rd | 1 man/textanomaly.Rd | 5 12 files changed, 697 insertions(+), 190 deletions(-)
Title: Exploratory Data Analysis for the 'spatstat' Family
Description: Functionality for exploratory data analysis and nonparametric analysis of
spatial data, mainly spatial point patterns,
in the 'spatstat' family of packages.
(Excludes analysis of spatial data on a linear network,
which is covered by the separate package 'spatstat.linnet'.)
Methods include quadrat counts, K-functions and their simulation envelopes, nearest neighbour distance and empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with cross-validated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics, and kernel estimates of covariate effects. Formal hypothesis tests of random pattern (chi-squared, Kolmogorov-Smirnov, Monte Carlo, Diggle-Cressie-Loosmore-Ford, Dao-Genton, two-stage Monte Carlo) and tests for covariate effects (Cox-Berman-Waller-Lawson, Kolmogorov-Smirnov, ANOVA) are also supported.
Author: Adrian Baddeley [aut, cre, cph] ,
Rolf Turner [aut, cph] ,
Ege Rubak [aut, cph] ,
Kasper Klitgaard Berthelsen [ctb],
Warick Brown [cph],
Achmad Choiruddin [ctb],
Ya-Mei Chang [ctb],
Jean-Francois Coeurjolly [ctb],
Lucia Cobo Sanchez [ctb, cph],
Ottma [...truncated...]
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between spatstat.explore versions 3.7-0 dated 2026-01-22 and 3.8-0 dated 2026-03-22
DESCRIPTION | 14 MD5 | 93 - NAMESPACE | 11 NEWS | 122 ++ R/Kmulti.inhom.R | 12 R/bw.pcf.R | 4 R/coxmap.R |only R/dclftest.R | 1 R/envelope.R | 2147 ++------------------------------------- R/envelope3.R | 131 +- R/envelopeClass.R |only R/envelopeEngine.R |only R/hopskel.R | 8 R/localKcross.R | 12 R/pcf.R | 597 ++++++---- R/pcfinhom.R | 429 ++----- R/pcfmulti.R | 283 +++-- R/pcfmulti.inhom.R | 287 +++-- R/quadrattest.R | 62 - R/resolve.lambda.R | 212 ++- build/partial.rdb |binary inst/doc/packagesizes.txt | 3 inst/info/packagesizes.txt | 3 man/Kcross.inhom.Rd | 62 - man/Kdot.inhom.Rd | 48 man/Kmulti.inhom.Rd | 130 +- man/Smooth.ppp.Rd | 4 man/Tstat.Rd | 3 man/bits.test.Rd | 32 man/coxmap.Rd |only man/dclf.test.Rd | 54 man/density.ppp.Rd | 6 man/dg.test.Rd | 32 man/envelope.Rd | 56 - man/envelope.pp3.Rd | 49 man/macros/defns.Rd | 5 man/markcorr.Rd | 7 man/markcrosscorr.Rd | 7 man/pcf.ppp.Rd | 83 + man/pcfcross.Rd | 84 - man/pcfcross.inhom.Rd | 71 - man/pcfdot.Rd | 84 - man/pcfdot.inhom.Rd | 77 - man/pcfinhom.Rd | 23 man/pcfmulti.Rd | 162 +- man/pcfmulti.inhom.Rd |only man/relrisk.ppp.Rd | 2 man/spatstat.explore-internal.Rd | 28 tests/testsGtoJ.R | 2 tests/testsK.R | 23 50 files changed, 2083 insertions(+), 3482 deletions(-)
More information about spatstat.explore at CRAN
Permanent link
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-03-10 1.0.0
2026-03-08 0.9.0
Title: Random Generation Functionality for the 'spatstat' Family
Description: Functionality for random generation of spatial data in the 'spatstat' family of packages.
Generates random spatial patterns of points according to many simple rules (complete spatial randomness,
Poisson, binomial, random grid, systematic, cell), randomised alteration of patterns
(thinning, random shift, jittering), simulated realisations of random point processes including
simple sequential inhibition, Matern inhibition models, Neyman-Scott cluster processes
(using direct, Brix-Kendall, or hybrid algorithms),
log-Gaussian Cox processes, product shot noise cluster processes
and Gibbs point processes (using Metropolis-Hastings birth-death-shift algorithm,
alternating Gibbs sampler, or coupling-from-the-past perfect simulation).
Also generates random spatial patterns of line segments,
random tessellations, and random images (random noise, random mosaics).
Excludes random generation on a linear network,
which is covered by the separate package 'spatstat.linnet'.
Author: Adrian Baddeley [aut, cre, cph] ,
Rolf Turner [aut, cph] ,
Ege Rubak [aut, cph] ,
Tilman Davies [aut, cph] ,
Kasper Klitgaard Berthelsen [ctb, cph],
David Bryant [ctb, cph],
Ya-Mei Chang [ctb, cph],
Ute Hahn [ctb],
Abdollah Jalilian [ctb],
Dominic Sc [...truncated...]
Maintainer: Adrian Baddeley <Adrian.Baddeley@curtin.edu.au>
Diff between spatstat.random versions 3.4-4 dated 2026-01-21 and 3.4-5 dated 2026-03-22
DESCRIPTION | 10 +- MD5 | 44 +++++----- NAMESPACE | 18 ++-- NEWS | 59 ++++++++++++++ R/clusterprocess.R | 5 - R/kraever.R | 20 ++-- R/random.R | 149 ++--------------------------------- R/randomSSI.R |only R/randomfields.R | 2 R/randommk.R | 2 R/randompp3.R | 166 +++++++++++++++++++++++++++++++++++----- R/rmhmodel.R | 2 build/partial.rdb |binary inst/doc/packagesizes.txt | 1 inst/info/packagesizes.txt | 1 man/clusterprocess.Rd |only man/macros/defns.Rd | 5 - man/methods.clusterprocess.Rd |only man/rSSI.Rd | 39 ++++++--- man/rpoint3.Rd |only man/rpoispp3.Rd | 26 +++++- man/runifpoint3.Rd | 11 ++ man/spatstat.random-internal.Rd | 24 ++--- src/mhsnoop.c | 47 +++++++---- tests/Random.R | 32 +++++++ 25 files changed, 414 insertions(+), 249 deletions(-)
More information about spatstat.random at CRAN
Permanent link
Title: Minimal Interface of the C++ 'MixtComp' Library for Mixture
Models with Heterogeneous and (Partially) Missing Data
Description: Mixture Composer <https://github.com/modal-inria/MixtComp> is a project to build mixture models with
heterogeneous data sets and partially missing data management.
It includes models for real, categorical, counting, functional and ranking data.
This package contains the minimal R interface of the C++ 'MixtComp' library.
Author: Vincent Kubicki [aut],
Christophe Biernacki [aut],
Quentin Grimonprez [aut, cre],
Serge Iovleff [ctb],
Matthieu Marbac-Lourdelle [ctb],
Etienne Goffinet [ctb],
Patrick Wieschollek [ctb] ,
Tobias Wood [ctb] ,
Julien Vandaele [ctb]
Maintainer: Quentin Grimonprez <quentingrim@yahoo.fr>
Diff between RMixtCompIO versions 4.0.11 dated 2023-10-03 and 4.0.12 dated 2026-03-22
DESCRIPTION | 10 MD5 | 110 +++++----- NEWS | 13 - R/RMixtCompIO-package.R | 3 man/RMixtCompIO-package.Rd | 21 + src/Makevars | 2 src/lib/Composer/ClassDataStat.cpp | 2 src/lib/Composer/ClassDataStat.h | 4 src/lib/Composer/ClassSampler.cpp | 2 src/lib/Composer/ClassSampler.h | 6 src/lib/Data/AugmentedData.h | 11 - src/lib/Data/ConfIntDataStat.h | 2 src/lib/IO/IO.h | 3 src/lib/IO/MisValParser.h | 2 src/lib/LinAlg/ConstIterator.h | 6 src/lib/LinAlg/Iterator.h | 7 src/lib/Mixture/Functional/FuncCSComputation.cpp | 5 src/lib/Mixture/Functional/FunctionCS.h | 2 src/lib/Mixture/Functional/FunctionCSParser.cpp | 2 src/lib/Mixture/IMixture.h | 39 ++- src/lib/Mixture/Rank/RankISRIndividual.h | 8 src/lib/Mixture/Rank/RankISRParser.cpp | 6 src/lib/Mixture/Rank/RankISRStat.h | 4 src/lib/Mixture/Simple/Gaussian/Gaussian.cpp | 7 src/lib/Mixture/Simple/Gaussian/Gaussian.h | 7 src/lib/Mixture/Simple/Gaussian/GaussianLikelihood.cpp | 4 src/lib/Mixture/Simple/Gaussian/GaussianLikelihood.h | 4 src/lib/Mixture/Simple/Gaussian/GaussianSampler.h | 6 src/lib/Mixture/Simple/Multinomial/MultinomialDataStat.h | 2 src/lib/Mixture/Simple/Multinomial/MultinomialLikelihood.h | 4 src/lib/Mixture/Simple/Multinomial/MultinomialSampler.cpp | 2 src/lib/Mixture/Simple/Multinomial/MultinomialSampler.h | 6 src/lib/Mixture/Simple/NegativeBinomial/NegativeBinomial.h | 4 src/lib/Mixture/Simple/NegativeBinomial/NegativeBinomialLikelihood.cpp | 4 src/lib/Mixture/Simple/NegativeBinomial/NegativeBinomialLikelihood.h | 2 src/lib/Mixture/Simple/NegativeBinomial/NegativeBinomialSampler.h | 4 src/lib/Mixture/Simple/NegativeBinomial/NegativeBinomialStatistic.h | 4 src/lib/Mixture/Simple/Poisson/Poisson.cpp | 6 src/lib/Mixture/Simple/Poisson/Poisson.h | 4 src/lib/Mixture/Simple/Poisson/PoissonLikelihood.cpp | 4 src/lib/Mixture/Simple/Poisson/PoissonLikelihood.h | 4 src/lib/Mixture/Simple/Poisson/PoissonSampler.h | 4 src/lib/Mixture/Simple/Poisson/PoissonStatistic.h | 5 src/lib/Mixture/Simple/Weibull/Weibull.cpp | 6 src/lib/Mixture/Simple/Weibull/Weibull.h | 6 src/lib/Mixture/Simple/Weibull/WeibullStatistic.h | 3 src/lib/Run/Learn.h | 1 src/lib/Run/Predict.h | 3 src/lib/Statistic/ExponentialStatistic.h | 2 src/lib/Statistic/GaussianStatistic.h | 2 src/lib/Statistic/MultinomialStatistic.h | 7 src/lib/Statistic/UniformStatistic.h | 2 src/lib/Strategy/GibbsStrategy.h | 4 src/lib/Strategy/SEMStrategy.h | 5 src/lib/Various/Constants.h | 2 src/lib/Various/Various.cpp | 2 56 files changed, 239 insertions(+), 163 deletions(-)
Title: Download and Tidy Data from the Australian Prudential Regulation
Authority
Description: Download the latest data from the Australian Prudential Regulation
Authority <https://www.apra.gov.au/> and import it into R as a tidy data
frame.
Author: Jarrod van der Wal [aut, cre, cph]
Maintainer: Jarrod van der Wal <jarvanderwal@gmail.com>
Diff between readapra versions 0.2.1 dated 2025-02-22 and 0.2.2 dated 2026-03-22
DESCRIPTION | 13 +-- MD5 | 32 ++++---- NEWS.md | 4 + R/download_apra.R | 134 +++++++++++++++++++++--------------- R/read_adipops.R | 11 ++ R/read_madis.R | 8 ++ R/read_qadicp.R | 9 ++ R/readapra_package.R | 3 R/test_wrappers.R | 12 --- R/url_selector.R | 2 man/apra_stat_pubs.Rd | 44 +++++------ man/download_apra.Rd | 106 ++++++++++++++-------------- man/figures/README-plot_madis-1.png |binary man/read_apra.Rd | 110 ++++++++++++++--------------- man/read_apra_local.Rd | 98 +++++++++++++------------- man/readapra-package.Rd | 46 ++++++------ tests/testthat/test-download_apra.R | 61 ++-------------- 17 files changed, 351 insertions(+), 342 deletions(-)
Title: Analyzing and Visualizing Multidimensional Plant Traits
Description: Implements analytical methods for multidimensional plant traits, including Competitors-Stress tolerators-Ruderals strategy analysis using leaf traits, Leaf-Height-Seed strategy analysis, Niche Periodicity Table analysis, and Trait Network analysis. Provides functions for data analysis, visualization, and network metrics calculation. Methods are based on He et al. (2026) <doi:10.1002/ecog.08026>.
Author: Yan He [aut, cre],
Zhaogang Liu [aut],
Jiangshan Lai [aut],
Lingfeng Mao [aut]
Maintainer: Yan He <heyan@njfu.edu.cn>
Diff between MultiTraits versions 0.6.0 dated 2025-10-01 and 1.0.0 dated 2026-03-22
DESCRIPTION | 12 MD5 | 50 ++- NAMESPACE | 17 + NEWS.md | 14 R/LHS_strategy_scheme.R | 16 - R/NPT_discrete_plot.R | 4 R/PTMN.R |only R/PTMN_metrics.R |only R/PTMN_plot.R |only R/average_interlayer_clustering_coefficient.R |only R/average_interlayer_path_length.R |only R/cross_layer_groups.R |only R/crosslayer_module_assoc.R |only R/forest_invader_traits.R |only R/forest_invader_tree.R |only R/interlayer_closeness.R |only R/interlayer_clustering_coefficient.R |only R/interlayer_degree.R |only R/interlayer_edge_density.R |only README.md | 114 +++++-- build/partial.rdb |only data/forest_invader_traits.rda |only data/forest_invader_tree.rda |only inst/doc/MultiTraits_tutorial.R | 45 ++ inst/doc/MultiTraits_tutorial.Rmd | 99 ++++-- inst/doc/MultiTraits_tutorial.html | 355 ++++++++++++++++++----- man/PTMN.Rd |only man/PTMN_metrics.Rd |only man/PTMN_plot.Rd |only man/average_interlayer_clustering_coefficient.Rd |only man/average_interlayer_path_length.Rd |only man/cross_layer_groups.Rd |only man/crosslayer_module_assoc.Rd |only man/figures/6.jpg |only man/forest_invader_traits.Rd |only man/forest_invader_tree.Rd |only man/interlayer_closeness.Rd |only man/interlayer_clustering_coefficient.Rd |only man/interlayer_degree.Rd |only man/interlayer_edge_density.Rd |only vignettes/MultiTraits_tutorial.Rmd | 99 ++++-- 41 files changed, 661 insertions(+), 164 deletions(-)
Title: Cross-Platform File System Operations Based on 'libuv'
Description: A cross-platform interface to file system operations, built
on top of the 'libuv' C library.
Author: Jim Hester [aut],
Hadley Wickham [aut],
Gabor Csardi [aut],
Jeroen Ooms [cre],
libuv project contributors [cph] ,
Joyent, Inc. and other Node contributors [cph] ,
Posit Software, PBC [cph, fnd]
Maintainer: Jeroen Ooms <jeroenooms@gmail.com>
Diff between fs versions 1.6.7 dated 2026-03-06 and 2.0.0 dated 2026-03-22
fs-1.6.7/fs/src/Makevars |only fs-1.6.7/fs/src/libuv-1.44.2 |only fs-2.0.0/fs/DESCRIPTION | 11 - fs-2.0.0/fs/MD5 | 350 +------------------------------------ fs-2.0.0/fs/NEWS.md | 8 fs-2.0.0/fs/build/vignette.rds |binary fs-2.0.0/fs/cleanup | 5 fs-2.0.0/fs/configure |only fs-2.0.0/fs/src/Makevars.in |only fs-2.0.0/fs/src/Makevars.vendor |only fs-2.0.0/fs/src/Makevars.win | 38 +--- fs-2.0.0/fs/src/windows/getmode.cc | 1 fs-2.0.0/fs/tools |only 13 files changed, 39 insertions(+), 374 deletions(-)
Title: High Performance Container Data Types
Description: Provides high performance container data types such
as queues, stacks, deques, dicts and ordered dicts. Benchmarks
<https://randy3k.github.io/collections/articles/benchmark.html> have
shown that these containers are asymptotically more efficient than
those offered by other packages.
Author: Randy Lai [aut, cre],
Andrea Mazzoleni [cph] ,
Yann Collet [cph]
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Diff between collections versions 0.3.11 dated 2026-02-05 and 0.3.12 dated 2026-03-22
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- src/dict.c | 2 +- src/utils.c | 2 +- src/utils.h | 9 +++++++++ 5 files changed, 19 insertions(+), 10 deletions(-)
Title: Fast Generators and Iterators for Permutations, Combinations,
Integer Partitions and Compositions
Description: Fast generators and iterators for permutations, combinations,
integer partitions and compositions. The arrangements are in
lexicographical order and generated iteratively in a memory efficient manner.
It has been demonstrated that 'arrangements' outperforms most existing
packages of similar kind. Benchmarks could be found at
<https://randy3k.github.io/arrangements/articles/benchmark.html>.
Author: Randy Lai [aut, cre]
Maintainer: Randy Lai <randy.cs.lai@gmail.com>
Diff between arrangements versions 1.1.9 dated 2020-09-13 and 1.1.10 dated 2026-03-22
DESCRIPTION | 12 ++++++------ MD5 | 10 +++++----- README.md | 6 +++--- man/arrangements-package.Rd | 2 +- src/macros.h | 25 ++++++++++++++++--------- src/utils.c | 17 ++++++++++++++--- 6 files changed, 45 insertions(+), 27 deletions(-)
Title: Data Analysis Using Regression and Multilevel/Hierarchical
Models
Description: Functions to accompany A. Gelman and J. Hill, Data Analysis Using Regression and Multilevel/Hierarchical Models, Cambridge University Press, 2007.
Author: Andrew Gelman [aut],
Yu-Sung Su [aut, cre] ,
Masanao Yajima [ctb],
Jennifer Hill [ctb],
Maria Grazia Pittau [ctb],
Jouni Kerman [ctb],
Tian Zheng [ctb],
Vincent Dorie [ctb]
Maintainer: Yu-Sung Su <suyusung@tsinghua.edu.cn>
Diff between arm versions 1.15-1 dated 2026-03-15 and 1.15-2 dated 2026-03-22
CHANGELOG | 4 ++++ DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/rescale.R | 15 +++------------ 4 files changed, 14 insertions(+), 19 deletions(-)
Title: Transport Modeling: Network Processing, Route Enumeration, and
Traffic Assignment
Description: High-performance tools for transport modeling - network processing, route
enumeration, and traffic assignment in R. The package implements the Path-Sized Logit
model for traffic assignment - Ben-Akiva and Bierlaire (1999) <doi:10.1007/978-1-4615-5203-1_2> -
an efficient route enumeration algorithm, and provides powerful utility functions for (multimodal)
network generation, consolidation/contraction, and/or simplification. The user is expected to provide
a transport network (either a graph or collection of linestrings) and an origin-destination (OD)
matrix of trade/traffic flows. Maintained by transport consultants at CPCS (cpcs.ca).
Author: Sebastian Krantz [aut, cre],
Kamol Roy [ctb]
Maintainer: Sebastian Krantz <sebastian.krantz@graduateinstitute.ch>
Diff between flownet versions 0.2.1 dated 2026-02-22 and 0.2.2 dated 2026-03-22
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NAMESPACE | 2 +- NEWS.md | 6 ++++++ R/assignment.R | 7 ++----- R/utils.R | 4 ++-- inst/doc/introduction.html | 4 ++-- 7 files changed, 22 insertions(+), 19 deletions(-)