Title: An API Client for Australian Weather and Climate Data Resources
Description: Provides automated downloading, parsing and formatting of
weather data for Australia through API endpoints provided by the
Department of Primary Industries and Regional Development (DPIRD) of
Western Australia and by the Science and Technology Division of the
Queensland Government's Department of Environment and Science (DES).
As well as the Bureau of Meteorology (BOM) of the Australian
government precis and coastal forecasts,
and downloading and importing radar and satellite imagery files.
DPIRD weather data are accessed through public APIs provided by
DPIRD, <https://www.dpird.wa.gov.au/online-tools/apis/>, providing
access to weather station data from the DPIRD weather station
network. Australia-wide weather data are based on data from the
Australian Bureau of Meteorology (BOM) data and accessed through
SILO (Scientific Information for Land Owners) Jeffrey et al. (2001)
<doi:10.1016/S1364-8152(01)00008-1>. DPIRD data are made available
under a Creative Commons Attribut [...truncated...]
Author: Rodrigo Pires [aut, cre] ,
Anna Hepworth [aut] ,
Rebecca O'Leary [aut],
Jonathan Carroll [aut] ,
James Goldie [aut] ,
Dean Marchiori [aut] ,
Paul Melloy [aut] ,
Mark Padgham [aut] ,
Hugh Parsonage [aut] ,
Keith Pembleton [ctb] ,
Maelle Salmon [ctb] . [...truncated...]
Maintainer: Rodrigo Pires <rodrigo.pires@dpird.wa.gov.au>
Diff between weatherOz versions 2.0.2 dated 2025-09-19 and 3.0.0 dated 2026-04-08
weatherOz-2.0.2/weatherOz/R/get_ag_bulletin.R |only weatherOz-2.0.2/weatherOz/R/parse_ag_bulletin.R |only weatherOz-2.0.2/weatherOz/man/get_ag_bulletin.Rd |only weatherOz-2.0.2/weatherOz/man/parse_ag_bulletin.Rd |only weatherOz-2.0.2/weatherOz/tests/testthat/test-get_ag_bulletin.R |only weatherOz-3.0.0/weatherOz/DESCRIPTION | 15 weatherOz-3.0.0/weatherOz/MD5 | 216 - weatherOz-3.0.0/weatherOz/NAMESPACE | 9 weatherOz-3.0.0/weatherOz/NEWS.md | 110 weatherOz-3.0.0/weatherOz/R/find_forecast_towns.R | 56 weatherOz-3.0.0/weatherOz/R/get_coastal_forecast.R | 2 weatherOz-3.0.0/weatherOz/R/get_dpird_apsim.R | 24 weatherOz-3.0.0/weatherOz/R/get_dpird_summaries.R | 548 ++- weatherOz-3.0.0/weatherOz/R/get_key.R | 141 weatherOz-3.0.0/weatherOz/R/get_metno_daily_forecast.R |only weatherOz-3.0.0/weatherOz/R/get_metno_forecast.R |only weatherOz-3.0.0/weatherOz/R/get_patched_point.R | 36 weatherOz-3.0.0/weatherOz/R/get_precis_forecast.R | 2 weatherOz-3.0.0/weatherOz/R/get_radar_imagery.R | 4 weatherOz-3.0.0/weatherOz/R/get_satellite_imagery.R | 4 weatherOz-3.0.0/weatherOz/R/get_stations_metadata.R | 4 weatherOz-3.0.0/weatherOz/R/globals.R | 26 weatherOz-3.0.0/weatherOz/R/internal_functions.R | 536 ++- weatherOz-3.0.0/weatherOz/R/parse_coastal_forecast.R | 2 weatherOz-3.0.0/weatherOz/R/parse_precis_forecast.R | 2 weatherOz-3.0.0/weatherOz/R/weatherOz_print_functions.R | 8 weatherOz-3.0.0/weatherOz/README.md | 188 - weatherOz-3.0.0/weatherOz/build/vignette.rds |binary weatherOz-3.0.0/weatherOz/inst/WORDLIST | 31 weatherOz-3.0.0/weatherOz/inst/doc/use_case.html | 6 weatherOz-3.0.0/weatherOz/inst/doc/weatherOz.Rmd | 200 - weatherOz-3.0.0/weatherOz/inst/doc/weatherOz.html | 411 +- weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_BOM.Rmd | 479 ++- weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_BOM.html | 503 ++- weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_DPIRD.Rmd | 835 +++++ weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_DPIRD.html | 1097 ++++++- weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_SILO.Rmd | 1176 +++---- weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_SILO.html | 1493 +++++----- weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_metno.Rmd |only weatherOz-3.0.0/weatherOz/inst/doc/weatherOz_for_metno.html |only weatherOz-3.0.0/weatherOz/man/find_forecast_towns.Rd | 8 weatherOz-3.0.0/weatherOz/man/find_stations_in.Rd | 2 weatherOz-3.0.0/weatherOz/man/get_available_imagery.Rd | 6 weatherOz-3.0.0/weatherOz/man/get_available_radar.Rd | 6 weatherOz-3.0.0/weatherOz/man/get_coastal_forecast.Rd | 9 weatherOz-3.0.0/weatherOz/man/get_data_drill.Rd | 3 weatherOz-3.0.0/weatherOz/man/get_data_drill_apsim.Rd | 3 weatherOz-3.0.0/weatherOz/man/get_dpird_apsim.Rd | 3 weatherOz-3.0.0/weatherOz/man/get_dpird_extremes.Rd | 3 weatherOz-3.0.0/weatherOz/man/get_dpird_minute.Rd | 3 weatherOz-3.0.0/weatherOz/man/get_dpird_summaries.Rd | 15 weatherOz-3.0.0/weatherOz/man/get_key.Rd | 11 weatherOz-3.0.0/weatherOz/man/get_metno_daily_forecast.Rd |only weatherOz-3.0.0/weatherOz/man/get_metno_forecast.Rd |only weatherOz-3.0.0/weatherOz/man/get_patched_point.Rd | 5 weatherOz-3.0.0/weatherOz/man/get_patched_point_apsim.Rd | 3 weatherOz-3.0.0/weatherOz/man/get_precis_forecast.Rd | 9 weatherOz-3.0.0/weatherOz/man/get_radar_imagery.Rd | 9 weatherOz-3.0.0/weatherOz/man/get_satellite_imagery.Rd | 9 weatherOz-3.0.0/weatherOz/man/get_stations_metadata.Rd | 4 weatherOz-3.0.0/weatherOz/man/metno_get_dominant_symbol.Rd |only weatherOz-3.0.0/weatherOz/man/metno_resample_data_table.Rd |only weatherOz-3.0.0/weatherOz/man/metno_timeseries_to_data_table.Rd |only weatherOz-3.0.0/weatherOz/man/parse_coastal_forecast.Rd | 10 weatherOz-3.0.0/weatherOz/man/parse_precis_forecast.Rd | 10 weatherOz-3.0.0/weatherOz/man/weatherOz-package.Rd | 8 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_all_availability.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_extreme_all_values.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_extreme_erosion_conditions.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_get_apsim.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_minute_values.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_period_availability.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_summaries_15min.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_summaries_30min.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_summaries_daily.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_summaries_hourly.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_summaries_mixed_schema_me003.json |only weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_summaries_monthly.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/dpird_summaries_yearly.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/metadata_all_cassette.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/metadata_dpird_station.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/metadata_dpird_station_rich_TRUE.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/metadata_silo_station.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/metno_cache_reuse_compact.json |only weatherOz-3.0.0/weatherOz/tests/fixtures/metno_cache_revalidate_compact.json |only weatherOz-3.0.0/weatherOz/tests/fixtures/metno_daily_cache_reuse_compact.json |only weatherOz-3.0.0/weatherOz/tests/fixtures/metno_forecast_compact.json |only weatherOz-3.0.0/weatherOz/tests/fixtures/nearby_all_stations_DPIRD_station_code.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/nearby_all_stations_SILO_station_code.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/nearby_all_stations_latlon.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/nearby_dpird_stations_dpird_code.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/nearby_dpird_stations_lonlat_with_no_stations.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/nearby_dpird_stations_lonlat_with_stations.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/silo_get_data_drill_all_daily_values.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/silo_get_data_drill_apsim.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/silo_get_data_drill_selected_daily_values.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/silo_get_patched_point_apsim.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/silo_get_patched_point_daily_values.json | 2 weatherOz-3.0.0/weatherOz/tests/fixtures/silo_get_patched_point_selected_daily_values.json | 2 weatherOz-3.0.0/weatherOz/tests/testthat/test-get_dpird_availability.R | 116 weatherOz-3.0.0/weatherOz/tests/testthat/test-get_dpird_summaries.R | 215 + weatherOz-3.0.0/weatherOz/tests/testthat/test-get_patched_point.R | 30 weatherOz-3.0.0/weatherOz/tests/testthat/test-get_stations_metadata.R | 426 +- weatherOz-3.0.0/weatherOz/tests/testthat/test-metno_api.R |only weatherOz-3.0.0/weatherOz/vignettes/!precompile.R | 10 weatherOz-3.0.0/weatherOz/vignettes/combined_historical_forecast_plot-1.png |only weatherOz-3.0.0/weatherOz/vignettes/daily_forecast_plot-1.png |only weatherOz-3.0.0/weatherOz/vignettes/dpird-station-locations-map-1.png |binary weatherOz-3.0.0/weatherOz/vignettes/heat_stress_plot-1.png |only weatherOz-3.0.0/weatherOz/vignettes/hourly_forecast_plot-1.png |only weatherOz-3.0.0/weatherOz/vignettes/plot_sw_land_div_map-1.png |binary weatherOz-3.0.0/weatherOz/vignettes/silo-station-locations-map-1.png |binary weatherOz-3.0.0/weatherOz/vignettes/use_case.Rmd.orig | 2 weatherOz-3.0.0/weatherOz/vignettes/view_sw_ag_region-1.png |binary weatherOz-3.0.0/weatherOz/vignettes/weatherOz.Rmd | 200 - weatherOz-3.0.0/weatherOz/vignettes/weatherOz.Rmd.orig | 26 weatherOz-3.0.0/weatherOz/vignettes/weatherOz_for_BOM.Rmd | 479 ++- weatherOz-3.0.0/weatherOz/vignettes/weatherOz_for_BOM.Rmd.orig | 12 weatherOz-3.0.0/weatherOz/vignettes/weatherOz_for_DPIRD.Rmd | 835 +++++ weatherOz-3.0.0/weatherOz/vignettes/weatherOz_for_SILO.Rmd | 1176 +++---- weatherOz-3.0.0/weatherOz/vignettes/weatherOz_for_metno.Rmd |only weatherOz-3.0.0/weatherOz/vignettes/weatherOz_for_metno.Rmd.orig |only 122 files changed, 7846 insertions(+), 4040 deletions(-)
Title: Stacked Elastic Net
Description: Implements stacked elastic net regression (Rauschenberger 2021 <doi:10.1093/bioinformatics/btaa535>). The elastic net generalises ridge and lasso regularisation (Zou 2005 <doi:10.1111/j.1467-9868.2005.00503.x>). Instead of fixing or tuning the mixing parameter alpha, we combine multiple alpha by stacked generalisation (Wolpert 1992 <doi:10.1016/S0893-6080(05)80023-1>).
Author: Armin Rauschenberger [aut, cre]
Maintainer: Armin Rauschenberger <armin.rauschenberger@uni.lu>
Diff between starnet versions 1.0.0 dated 2025-06-10 and 1.0.1 dated 2026-04-08
starnet-1.0.0/starnet/man/dot-simulate.Rd |only starnet-1.0.1/starnet/DESCRIPTION | 8 starnet-1.0.1/starnet/MD5 | 20 starnet-1.0.1/starnet/R/functions.R | 43 - starnet-1.0.1/starnet/R/pkgname.R | 6 starnet-1.0.1/starnet/build/partial.rdb |binary starnet-1.0.1/starnet/build/vignette.rds |binary starnet-1.0.1/starnet/inst/doc/script.R | 880 ++++++++++++------------- starnet-1.0.1/starnet/inst/doc/starnet.R | 6 starnet-1.0.1/starnet/inst/doc/starnet.html | 5 starnet-1.0.1/starnet/man/simulate-internal.Rd |only starnet-1.0.1/starnet/man/starnet-package.Rd | 54 + 12 files changed, 543 insertions(+), 479 deletions(-)
Title: Power and Sample Size Calculation for Non-Proportional Hazards
and Beyond
Description: Performs power and sample size calculation for non-proportional hazards model using the Fleming-Harrington family of weighted log-rank tests. The sequentially calculated log-rank test score statistics are assumed to have independent increments as characterized in Anastasios A. Tsiatis (1982) <doi:10.1080/01621459.1982.10477898>. The mean and variance of log-rank test score statistics are calculated based on Kaifeng Lu (2021) <doi:10.1002/pst.2069>. The boundary crossing probabilities are calculated using the recursive integration algorithm described in Christopher Jennison and Bruce W. Turnbull (2000, ISBN:0849303168). The package can also be used for continuous, binary, and count data. For continuous data, it can handle missing data through mixed-model for repeated measures (MMRM). In crossover designs, it can estimate direct treatment effects while accounting for carryover effects. For binary data, it can design Simon's 2-stage, modified toxicity probability-2 (mTPI-2), a [...truncated...]
Author: Kaifeng Lu [aut, cre]
Maintainer: Kaifeng Lu <kaifenglu@gmail.com>
Diff between lrstat versions 0.3.0 dated 2026-03-07 and 0.3.1 dated 2026-04-08
DESCRIPTION | 12 MD5 | 269 +++++++++-------- NAMESPACE | 9 NEWS.md | 13 R/RcppExports.R | 266 +++++++++++++++++ R/lrsim.R | 2 R/lrsim_tsssd.R |only R/lrstat-package.R | 2 R/mvnormr.R |only R/parameter_descriptions.R | 50 +-- R/prints.R | 301 ++++++++++++++++--- README.md | 4 build/vignette.rds |binary inst/doc/direct_approximation_vs_schoenfeld.html | 4 inst/doc/fixed_follow-up.html | 10 inst/doc/group_sequential_simulation.html | 12 inst/doc/non-proportional_hazards.html | 8 inst/doc/stratified.html | 6 man/accrual.Rd | 2 man/binary_tte_sim.Rd | 4 man/caltime.Rd | 6 man/corr_pfs_os.Rd | 2 man/covrmst.Rd | 4 man/dtpwexp.Rd | 2 man/exitprob_tsssd.Rd |only man/figures |only man/getAccrualDurationFromN.Rd | 2 man/getBound.Rd | 21 - man/getBound_tsssd.Rd |only man/getDesign.Rd | 40 +- man/getDesignEquiv.Rd | 19 - man/getDesignMeanDiff.Rd | 40 +- man/getDesignMeanDiffEquiv.Rd | 19 - man/getDesignMeanDiffMMRM.Rd | 44 +- man/getDesignMeanDiffXO.Rd | 40 +- man/getDesignMeanDiffXOEquiv.Rd | 19 - man/getDesignMeanRatio.Rd | 40 +- man/getDesignMeanRatioEquiv.Rd | 19 - man/getDesignMeanRatioXO.Rd | 40 +- man/getDesignMeanRatioXOEquiv.Rd | 19 - man/getDesignOddsRatio.Rd | 40 +- man/getDesignOddsRatioEquiv.Rd | 19 - man/getDesignOneMean.Rd | 40 +- man/getDesignOneProportion.Rd | 40 +- man/getDesignOneSlope.Rd | 40 +- man/getDesignPairedMeanDiff.Rd | 40 +- man/getDesignPairedMeanDiffEquiv.Rd | 19 - man/getDesignPairedMeanRatio.Rd | 40 +- man/getDesignPairedMeanRatioEquiv.Rd | 19 - man/getDesignPairedPropMcNemar.Rd | 40 +- man/getDesignRiskDiff.Rd | 40 +- man/getDesignRiskDiffEquiv.Rd | 19 - man/getDesignRiskRatio.Rd | 40 +- man/getDesignRiskRatioEquiv.Rd | 19 - man/getDesignRiskRatioFM.Rd | 40 +- man/getDesignSlopeDiff.Rd | 40 +- man/getDesignSlopeDiffMMRM.Rd | 46 +-- man/getDesignWilcoxon.Rd | 40 +- man/getDesign_tsssd.Rd |only man/getDurationFromNevents.Rd | 6 man/getNeventsFromHazardRatio.Rd | 40 +- man/hazard_pd.Rd | 2 man/hazard_sub.Rd | 2 man/kmpower.Rd | 34 +- man/kmpower1s.Rd | 34 +- man/kmpowerequiv.Rd | 25 - man/kmsamplesize.Rd | 46 +-- man/kmsamplesize1s.Rd | 46 +-- man/kmsamplesizeequiv.Rd | 25 - man/kmstat.Rd | 6 man/kmsurv.Rd | 2 man/lrpower.Rd | 38 +- man/lrpowerequiv.Rd | 29 + man/lrsamplesize.Rd | 50 +-- man/lrsamplesizeequiv.Rd | 29 + man/lrschoenfeld.Rd | 46 +-- man/lrsim.Rd | 9 man/lrsim2e.Rd | 6 man/lrsim2e3a.Rd | 6 man/lrsim3a.Rd | 6 man/lrsim_tsssd.Rd |only man/lrsimsub.Rd | 6 man/lrstat.Rd | 6 man/mtpwexp.Rd | 2 man/natrisk.Rd | 4 man/nbpower.Rd | 34 +- man/nbpower1s.Rd | 34 +- man/nbpowerequiv.Rd | 25 - man/nbsamplesize.Rd | 46 +-- man/nbsamplesize1s.Rd | 46 +-- man/nbsamplesizeequiv.Rd | 25 - man/nbstat.Rd | 6 man/nevent.Rd | 4 man/param_accrualTime.Rd | 2 man/param_efficacyStopping.Rd | 2 man/param_fixedFollowup.Rd | 2 man/param_futilityBounds.Rd | 2 man/param_futilityStopping.Rd | 2 man/param_parameterAlphaSpending.Rd | 3 man/param_parameterBetaSpending.Rd | 3 man/param_piecewiseSurvivalTime.Rd | 2 man/param_typeAlphaSpending.Rd | 16 - man/param_typeBetaSpending.Rd | 12 man/param_typeOfComputation.Rd | 4 man/patrisk.Rd | 2 man/pevent.Rd | 2 man/pmvnormr.Rd |only man/print.lrsim_tsssd.Rd |only man/print.tsssd.Rd |only man/ptpwexp.Rd | 2 man/qmvnormr.Rd |only man/qtpwexp.Rd | 2 man/repeatedPValue.Rd | 19 - man/rmpower.Rd | 34 +- man/rmpower1s.Rd | 34 +- man/rmpowerequiv.Rd | 25 - man/rmsamplesize.Rd | 46 +-- man/rmsamplesize1s.Rd | 46 +-- man/rmsamplesizeequiv.Rd | 25 - man/rmst.Rd | 2 man/rmstat.Rd | 6 man/rtpwexp.Rd | 2 man/simonBayesSim.Rd | 2 src/Makevars |only src/Makevars.win |only src/RcppExports.cpp | 168 +++++++++++ src/dataframe_list.cpp | 159 ++++++++++ src/dataframe_list.h | 323 +++++++++++++++------ src/enrollment_event.h | 32 -- src/generic_design.cpp | 5 src/generic_design.h | 16 - src/logistic_regression.cpp | 3 src/logistic_regression.h | 13 src/lrsim.cpp | 25 + src/lrsim_tsssd.cpp |only src/miettinen_nurminen.h | 8 src/mvnormr.cpp |only src/mvnormr.h |only src/survival_analysis.cpp | 15 src/survival_analysis.h | 19 - src/thread_utils.h | 5 src/tsssd_design.cpp |only src/utilities.cpp | 347 +++++++++++++++++------ src/utilities.h | 239 ++++++++------- 144 files changed, 2955 insertions(+), 1417 deletions(-)
Title: Black-Box Optimization Toolkit
Description: Features highly configurable search spaces via the 'paradox'
package and optimizes every user-defined objective function. The
package includes several optimization algorithms e.g. Random Search,
Iterated Racing, Bayesian Optimization (in 'mlr3mbo') and Hyperband
(in 'mlr3hyperband'). bbotk is the base package of 'mlr3tuning',
'mlr3fselect' and 'miesmuschel'.
Author: Marc Becker [cre, aut] ,
Jakob Richter [aut] ,
Michel Lang [aut] ,
Bernd Bischl [aut] ,
Martin Binder [aut],
Olaf Mersmann [ctb]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between bbotk versions 1.9.0 dated 2026-02-28 and 1.10.0 dated 2026-04-08
bbotk-1.10.0/bbotk/DESCRIPTION | 12 bbotk-1.10.0/bbotk/MD5 | 228 +++++----- bbotk-1.10.0/bbotk/NAMESPACE | 5 bbotk-1.10.0/bbotk/NEWS.md | 7 bbotk-1.10.0/bbotk/R/Archive.R | 10 bbotk-1.10.0/bbotk/R/ArchiveAsync.R | 37 + bbotk-1.10.0/bbotk/R/ArchiveAsyncFrozen.R | 13 bbotk-1.10.0/bbotk/R/ArchiveBatch.R | 45 + bbotk-1.10.0/bbotk/R/CallbackAsync.R | 63 +- bbotk-1.10.0/bbotk/R/CallbackBatch.R | 48 +- bbotk-1.10.0/bbotk/R/Codomain.R | 24 - bbotk-1.10.0/bbotk/R/ContextAsync.R | 11 bbotk-1.10.0/bbotk/R/ContextBatch.R | 11 bbotk-1.10.0/bbotk/R/EvalInstance.R | 16 bbotk-1.10.0/bbotk/R/Objective.R | 45 + bbotk-1.10.0/bbotk/R/ObjectiveRFun.R | 28 - bbotk-1.10.0/bbotk/R/ObjectiveRFunDt.R | 38 + bbotk-1.10.0/bbotk/R/ObjectiveRFunMany.R | 43 + bbotk-1.10.0/bbotk/R/OptimInstance.R | 20 bbotk-1.10.0/bbotk/R/OptimInstanceAsync.R | 14 bbotk-1.10.0/bbotk/R/OptimInstanceAsyncMultiCrit.R | 21 bbotk-1.10.0/bbotk/R/OptimInstanceAsyncSingleCrit.R | 23 - bbotk-1.10.0/bbotk/R/OptimInstanceBatch.R | 40 + bbotk-1.10.0/bbotk/R/OptimInstanceBatchMultiCrit.R | 13 bbotk-1.10.0/bbotk/R/OptimInstanceBatchSingleCrit.R | 21 bbotk-1.10.0/bbotk/R/OptimInstanceMultiCrit.R | 10 bbotk-1.10.0/bbotk/R/OptimInstanceSingleCrit.R | 10 bbotk-1.10.0/bbotk/R/Optimizer.R | 40 + bbotk-1.10.0/bbotk/R/OptimizerAsync.R | 76 ++- bbotk-1.10.0/bbotk/R/OptimizerAsyncDesignPoints.R | 11 bbotk-1.10.0/bbotk/R/OptimizerAsyncGridSearch.R | 16 bbotk-1.10.0/bbotk/R/OptimizerAsyncRandomSearch.R | 10 bbotk-1.10.0/bbotk/R/OptimizerBatch.R | 36 + bbotk-1.10.0/bbotk/R/OptimizerBatchChain.R | 18 bbotk-1.10.0/bbotk/R/OptimizerBatchCmaes.R | 15 bbotk-1.10.0/bbotk/R/OptimizerBatchDesignPoints.R | 8 bbotk-1.10.0/bbotk/R/OptimizerBatchFocusSearch.R | 163 ++++--- bbotk-1.10.0/bbotk/R/OptimizerBatchGenSA.R | 21 bbotk-1.10.0/bbotk/R/OptimizerBatchGridSearch.R | 11 bbotk-1.10.0/bbotk/R/OptimizerBatchIrace.R | 35 + bbotk-1.10.0/bbotk/R/OptimizerBatchLocalSearch.R | 4 bbotk-1.10.0/bbotk/R/OptimizerBatchNLoptr.R | 40 + bbotk-1.10.0/bbotk/R/OptimizerBatchRandomSearch.R | 7 bbotk-1.10.0/bbotk/R/Progressor.R | 12 bbotk-1.10.0/bbotk/R/Terminator.R | 30 - bbotk-1.10.0/bbotk/R/TerminatorClockTime.R | 6 bbotk-1.10.0/bbotk/R/TerminatorCombo.R | 16 bbotk-1.10.0/bbotk/R/TerminatorEvals.R | 7 bbotk-1.10.0/bbotk/R/TerminatorNone.R | 11 bbotk-1.10.0/bbotk/R/TerminatorPerfReached.R | 7 bbotk-1.10.0/bbotk/R/TerminatorRunTime.R | 13 bbotk-1.10.0/bbotk/R/TerminatorStagnation.R | 8 bbotk-1.10.0/bbotk/R/TerminatorStagnationBatch.R | 24 - bbotk-1.10.0/bbotk/R/TerminatorStagnationHypervolume.R | 10 bbotk-1.10.0/bbotk/R/as_terminator.R | 15 bbotk-1.10.0/bbotk/R/assertions.R | 65 ++ bbotk-1.10.0/bbotk/R/bb_optimize.R | 32 + bbotk-1.10.0/bbotk/R/bbotk_reflections.R | 13 bbotk-1.10.0/bbotk/R/bibentries.R | 3 bbotk-1.10.0/bbotk/R/conditions.R | 8 bbotk-1.10.0/bbotk/R/helper.R | 8 bbotk-1.10.0/bbotk/R/local_search.R | 21 bbotk-1.10.0/bbotk/R/mlr_callbacks.R | 12 bbotk-1.10.0/bbotk/R/mlr_optimizers.R | 63 +- bbotk-1.10.0/bbotk/R/mlr_terminators.R | 25 - bbotk-1.10.0/bbotk/R/mlr_test_functions.R |only bbotk-1.10.0/bbotk/R/nds_selection.R | 7 bbotk-1.10.0/bbotk/R/sugar.R | 46 +- bbotk-1.10.0/bbotk/R/worker_loops.R | 16 bbotk-1.10.0/bbotk/build/partial.rdb |binary bbotk-1.10.0/bbotk/man/ArchiveAsync.Rd | 2 bbotk-1.10.0/bbotk/man/ArchiveAsyncFrozen.Rd | 2 bbotk-1.10.0/bbotk/man/ObjectiveTestFunction.Rd |only bbotk-1.10.0/bbotk/man/OptimInstanceAsyncMultiCrit.Rd | 2 bbotk-1.10.0/bbotk/man/OptimInstanceAsyncSingleCrit.Rd | 2 bbotk-1.10.0/bbotk/man/OptimizerAsync.Rd | 8 bbotk-1.10.0/bbotk/man/mlr_optimizers_async_design_points.Rd | 2 bbotk-1.10.0/bbotk/man/mlr_optimizers_async_grid_search.Rd | 2 bbotk-1.10.0/bbotk/man/mlr_optimizers_async_random_search.Rd | 2 bbotk-1.10.0/bbotk/man/mlr_test_functions.Rd |only bbotk-1.10.0/bbotk/man/oi_async.Rd | 2 bbotk-1.10.0/bbotk/man/otfun.Rd |only bbotk-1.10.0/bbotk/src/rc_helpers.c | 7 bbotk-1.10.0/bbotk/tests/testthat/helper.R | 32 - bbotk-1.10.0/bbotk/tests/testthat/setup.R | 12 bbotk-1.10.0/bbotk/tests/testthat/teardown.R | 4 bbotk-1.10.0/bbotk/tests/testthat/test_ArchiveAsync.R | 7 bbotk-1.10.0/bbotk/tests/testthat/test_ArchiveBatch.R | 92 ++-- bbotk-1.10.0/bbotk/tests/testthat/test_CallbackAsync.R | 106 ++-- bbotk-1.10.0/bbotk/tests/testthat/test_CallbackBatch.R | 99 +--- bbotk-1.10.0/bbotk/tests/testthat/test_Objective.R | 147 ++++-- bbotk-1.10.0/bbotk/tests/testthat/test_OptimInstanceAsyncSingleCrit.R | 2 bbotk-1.10.0/bbotk/tests/testthat/test_OptimInstanceBatchMultiCrit.R | 1 bbotk-1.10.0/bbotk/tests/testthat/test_OptimInstanceBatchSingleCrit.R | 22 bbotk-1.10.0/bbotk/tests/testthat/test_Optimizer.R | 12 bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerAsynDesignPoints.R | 1 bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerAsync.R | 12 bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchChain.R | 32 - bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchCmaes.R | 6 bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchDesignPoints.R | 10 bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchFocusSearch.R | 105 ++-- bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchGenSA.R | 6 bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchIrace.R | 126 +++-- bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchLocalSearch.R | 60 +- bbotk-1.10.0/bbotk/tests/testthat/test_OptimizerBatchNLoptr.R | 30 + bbotk-1.10.0/bbotk/tests/testthat/test_TerminatorClockTime.R | 6 bbotk-1.10.0/bbotk/tests/testthat/test_TerminatorEvals.R | 2 bbotk-1.10.0/bbotk/tests/testthat/test_TerminatorRunTime.R | 2 bbotk-1.10.0/bbotk/tests/testthat/test_TerminatorStagnationHypervolume.R | 1 bbotk-1.10.0/bbotk/tests/testthat/test_bb_optimize.R | 9 bbotk-1.10.0/bbotk/tests/testthat/test_c_functions.R | 24 - bbotk-1.10.0/bbotk/tests/testthat/test_deprecated.R | 32 - bbotk-1.10.0/bbotk/tests/testthat/test_local_search.R | 17 bbotk-1.10.0/bbotk/tests/testthat/test_mlr_callbacks.R | 8 bbotk-1.10.0/bbotk/tests/testthat/test_mlr_test_functions.R |only bbotk-1.10.0/bbotk/tests/testthat/test_nds_selection.R | 47 +- bbotk-1.10.0/bbotk/tests/testthat/test_search_start.R | 12 bbotk-1.9.0/bbotk/tests/testthat/helper_rush.R |only 118 files changed, 1824 insertions(+), 1136 deletions(-)
Title: An 'Armadillo' Interface
Description: Provides function declarations and inline function definitions that
facilitate communication between R and the 'Armadillo' 'C++' library for
linear algebra and scientific computing. This implementation is derived
from Vargas Sepulveda and Schneider Malamud (2024)
<doi:10.1016/j.softx.2025.102087>.
Author: Mauricio Vargas Sepulveda [aut, cre] ,
Jonathan Schneider Malamud [ctb],
Conrad Sanderson [aut] )
Maintainer: Mauricio Vargas Sepulveda <m.vargas.sepulveda@gmail.com>
Diff between armadillo4r versions 0.7.0 dated 2025-12-04 and 0.8.0 dated 2026-04-08
armadillo4r-0.7.0/armadillo4r/inst/extdata/src/02_your_functions.h |only armadillo4r-0.8.0/armadillo4r/DESCRIPTION | 6 armadillo4r-0.8.0/armadillo4r/MD5 | 31 - armadillo4r-0.8.0/armadillo4r/NEWS.md | 9 armadillo4r-0.8.0/armadillo4r/README.md | 2 armadillo4r-0.8.0/armadillo4r/build/partial.rdb |binary armadillo4r-0.8.0/armadillo4r/configure | 155 +++--- armadillo4r-0.8.0/armadillo4r/inst/extdata/configure | 254 ++++++++-- armadillo4r-0.8.0/armadillo4r/inst/extdata/configure.win |only armadillo4r-0.8.0/armadillo4r/inst/extdata/dev/01_load_or_install.R | 2 armadillo4r-0.8.0/armadillo4r/inst/extdata/src/02_ols_qr.h |only armadillo4r-0.8.0/armadillo4r/inst/extdata/src/Makevars.win | 3 armadillo4r-0.8.0/armadillo4r/inst/extdata/src/main.cpp | 4 armadillo4r-0.8.0/armadillo4r/inst/include/armadillo4r.hpp | 42 + armadillo4r-0.8.0/armadillo4r/inst/include/armadillo4r/wrappers/cubes.hpp |only armadillo4r-0.8.0/armadillo4r/inst/include/armadillo4r/wrappers/fields.hpp |only armadillo4r-0.8.0/armadillo4r/inst/include/armadillo4r/wrappers/matrices.hpp | 16 armadillo4r-0.8.0/armadillo4r/inst/include/armadillo4r/wrappers/sparse_matrices.hpp | 199 ++++--- armadillo4r-0.8.0/armadillo4r/inst/include/armadillo4r/wrappers/vectors.hpp | 7 19 files changed, 536 insertions(+), 194 deletions(-)
Title: Multiple Imputation by Super Learning
Description: Performs multiple imputation of missing data using an ensemble
super learner built with the tidymodels framework. For each incomplete
column, a stacked ensemble of candidate learners is trained on a bootstrap
sample of the observed data and used to generate imputations via predictive
mean matching (continuous), probability draws (binary), or cumulative
probability draws (categorical). Supports parallelism across imputed
datasets via the future framework.
Author: Justin Manjourides [aut, cre] ,
Thomas Carpenito [aut]
Maintainer: Justin Manjourides <j.manjourides@northeastern.edu>
Diff between misl versions 1.0.0 dated 2026-03-30 and 2.0.0 dated 2026-04-08
DESCRIPTION | 25 + MD5 | 26 + NAMESPACE | 1 NEWS.md | 53 +++ R/misl.R | 533 +++++++++++++++++++++++++++++--------- inst/doc/misl-introduction.R | 215 ++++++++++----- inst/doc/misl-introduction.Rmd | 235 ++++++++++++---- inst/doc/misl-introduction.html | 560 ++++++++++++++++++++++++---------------- man/check_datatype.Rd | 3 man/list_learners.Rd | 9 man/misl.Rd | 65 +++- man/plot_misl_trace.Rd |only man/predict.misl_polr_fit.Rd |only tests/testthat/test-misl.R | 275 +++++++++++++++++++ vignettes/misl-introduction.Rmd | 235 ++++++++++++---- 15 files changed, 1660 insertions(+), 575 deletions(-)