Title: Dominance Analysis Methods
Description: Dominance analysis relative importance methods that are intended
for predictive models.
Author: Joseph Luchman [aut, cre]
Maintainer: Joseph Luchman <jluchman@gmail.com>
Diff between domir versions 1.2.0 dated 2024-05-04 and 1.3.0 dated 2026-04-19
domir-1.2.0/domir/man/dominance_scalar.Rd |only domir-1.2.0/domir/man/formula_parse.Rd |only domir-1.3.0/domir/DESCRIPTION | 25 domir-1.3.0/domir/MD5 | 41 domir-1.3.0/domir/NAMESPACE | 2 domir-1.3.0/domir/NEWS.md | 14 domir-1.3.0/domir/R/dominance_internals.r | 805 ++++++-- domir-1.3.0/domir/R/domir-package.r | 34 domir-1.3.0/domir/R/domir.r | 1766 +++++++++---------- domir-1.3.0/domir/R/formula_list.R | 76 domir-1.3.0/domir/README.md | 71 domir-1.3.0/domir/build/vignette.rds |binary domir-1.3.0/domir/inst/doc/domir_basics.Rmd | 6 domir-1.3.0/domir/inst/doc/domir_basics.html | 54 domir-1.3.0/domir/man/domir-package.Rd | 30 domir-1.3.0/domir/man/domir.Rd | 301 +-- domir-1.3.0/domir/man/fmllst2Fml.Rd | 6 domir-1.3.0/domir/man/formula_list.Rd | 2 domir-1.3.0/domir/man/print.domir.Rd | 17 domir-1.3.0/domir/man/summary.domir.Rd | 4 domir-1.3.0/domir/tests/testthat/test-Features.r | 22 domir-1.3.0/domir/tests/testthat/test-Within_Group.r |only domir-1.3.0/domir/vignettes/domir_basics.Rmd | 6 23 files changed, 1783 insertions(+), 1499 deletions(-)
Title: Nearest Neighbor Observation Imputation and Evaluation Tools
Description: Performs nearest neighbor-based imputation using one or more alternative
approaches to processing multivariate data. These include methods based on canonical
correlation: analysis, canonical correspondence analysis, and a multivariate adaptation
of the random forest classification and regression techniques of Leo Breiman and Adele
Cutler. Additional methods are also offered. The package includes functions for
comparing the results from running alternative techniques, detecting imputation targets
that are notably distant from reference observations, detecting and correcting
for bias, bootstrapping and building ensemble imputations, and mapping results.
Author: Jeffrey S. Evans [aut, cre] ,
Nicholas L. Crookston [aut],
Andrew O. Finley [aut],
John Coulston [ctb, com]
Maintainer: Jeffrey S. Evans <sage_insights@outlook.com>
Diff between yaImpute versions 1.0-34.1 dated 2024-09-21 and 1.0-36 dated 2026-04-19
DESCRIPTION | 19 MD5 | 57 - NEWS |only R/newtargets.R | 553 +++++++------- R/notablydistant.R | 1 R/yai.R | 1781 +++++++++++++++++++++++----------------------- build/partial.rdb |binary data/MoscowMtStJoe.RData |binary data/TallyLake.RData |binary inst/CITATION | 33 man/correctbias.Rd | 2 man/figures/logo.png |binary man/impute.yai.Rd | 2 man/newtargets.Rd | 3 man/notablydifferent.Rd | 2 man/rmsd.yai.Rd | 2 man/varSelection.Rd | 4 man/vars.Rd | 4 man/whatsMax.Rd | 2 man/yai.Rd | 6 src/ANN.cpp | 8 src/annImpute.cpp | 3 src/bd_tree.cpp | 12 src/kd_dump.cpp | 2 src/kd_fix_rad_search.cpp | 2 src/kd_pr_search.cpp | 2 src/kd_search.cpp | 2 src/kd_split.cpp | 72 - src/kd_util.cpp | 18 src/util.cpp | 4 30 files changed, 1305 insertions(+), 1291 deletions(-)
Title: Model-Independent Variable Selection via the Rule-Based Variable
Priority
Description: A new framework of variable selection, which instead of generating artificial covariates such as permutation importance and knockoffs, creates release rules to examine the affect on the response for each covariate where the conditional distribution of the response variable can be arbitrary and unknown.
Author: Min Lu [aut],
Aster K. Shear [aut],
Udaya B. Kogalur [aut, cre],
Hemant Ishwaran [aut]
Maintainer: Udaya B. Kogalur <ubk@kogalur.com>
Diff between varPro versions 3.0.0 dated 2026-04-08 and 3.1.0 dated 2026-04-19
varPro-3.0.0/varPro/man/importance.varpro.Rd |only varPro-3.0.0/varPro/man/partial.ivarpro.Rd |only varPro-3.1.0/varPro/DESCRIPTION | 8 varPro-3.1.0/varPro/MD5 | 28 +- varPro-3.1.0/varPro/NAMESPACE | 20 - varPro-3.1.0/varPro/NEWS.md | 27 ++ varPro-3.1.0/varPro/R/importance.varpro.R | 114 +++++++++- varPro-3.1.0/varPro/R/utilities_ivarpro.R | 64 ++--- varPro-3.1.0/varPro/data/alzheimers.rda |binary varPro-3.1.0/varPro/data/glioma.rda |binary varPro-3.1.0/varPro/data/hrrecov.rda |binary varPro-3.1.0/varPro/man/hrrecov.Rd | 4 varPro-3.1.0/varPro/man/importance.Rd |only varPro-3.1.0/varPro/man/ivarpro.Rd | 28 +- varPro-3.1.0/varPro/man/plot.ivarpro.Rd |only varPro-3.1.0/varPro/man/plot.partialpro.Rd | 305 ++++++++++++++------------- varPro-3.1.0/varPro/man/predict.ivarpro.Rd | 47 ++-- 17 files changed, 401 insertions(+), 244 deletions(-)
Title: Fit Neutral Community Model to Microbiome or Ecological Data
Description: Provides tools for fitting the neutral community model (NCM) to
assess the role of stochastic processes in community assembly. The package
implements the framework of Sloan et al. (2006) <doi:10.1111/j.1462-2920.2005.00956.x>,
enabling users to evaluate neutral dynamics in ecological and microbial communities.
Author: Yuxuan He [aut, cre, cph]
Maintainer: Yuxuan He <heyuxuan0525@outlook.com>
Diff between ncmR versions 0.1.0 dated 2026-04-10 and 0.2.0 dated 2026-04-19
DESCRIPTION | 8 ++++---- MD5 | 12 ++++++++---- NAMESPACE | 7 +++++++ NEWS.md | 8 ++++++++ R/plot.R |only README.md | 8 ++++++++ man/ggsave_unicode.Rd |only man/print.unicode_ggplot.Rd |only man/scatter_plot.Rd |only 9 files changed, 35 insertions(+), 8 deletions(-)
Title: Spatial Graph-Theoretic Genetic Gravity Modelling
Description: Implementation of spatial graph-theoretic genetic gravity models.
The model framework is applicable for other types of spatial flow questions.
Includes functions for constructing spatial graphs, sampling and summarizing
associated raster variables and building unconstrained and singly constrained
gravity models.
Author: Jeffrey S. Evans [aut, cre],
Melanie Murphy [aut]
Maintainer: Jeffrey S. Evans <sage_insights@outlook.com>
Diff between GeNetIt versions 0.1-6 dated 2023-06-14 and 0.1-7 dated 2026-04-19
DESCRIPTION | 14 +++++++------- MD5 | 4 ++-- inst/CITATION | 2 +- 3 files changed, 10 insertions(+), 10 deletions(-)
Title: Meta-Package for Compositional Data Analysis
Description: Meta-package for compositional data analysis. It attaches the
main stable packages of the 'coda' ecosystem, currently 'coda.base' and
'coda.plot', and provides helper tools to install development extensions
from 'GitHub'.
Author: Marc Comas-Cufi [aut, cre]
Maintainer: Marc Comas-Cufi <mcomas@imae.udg.edu>
Diff between coda.pack versions 0.1.2 dated 2026-04-10 and 0.1.3 dated 2026-04-19
DESCRIPTION | 6 - MD5 | 13 ++- NAMESPACE | 1 R/dev_install.R | 150 ++++++++++++++++++++++++++++++++++++++++++-- R/load_coda.pack.R | 4 - R/zzz.R | 3 man/install_coda_dev.Rd | 2 man/update_coda_packages.Rd |only 8 files changed, 160 insertions(+), 19 deletions(-)
Title: International Classification of Diseases 'ICD-10'/'ICD-11' for
Chile
Description: Tools for working with the International Classification of
Diseases ('ICD-10' Chile official 'MINSAL'/'DEIS' v2018). Includes
optimized 'SQL' search with 'SQLite', fuzzy matching of medical terms
('Jaro-Winkler'), Charlson and Elixhauser comorbidity calculation,
'WHO' 'ICD-11' 'API' integration, and hierarchical code validation.
Data from Centro FIC Chile 'DEIS' <https://deis.minsal.cl/centrofic/>.
Author: Rodolfo Tasso Suazo [aut, cre]
Maintainer: Rodolfo Tasso Suazo <rtasso@uchile.cl>
Diff between ciecl versions 0.9.2 dated 2026-01-27 and 0.9.6 dated 2026-04-19
ciecl-0.9.2/ciecl/inst/doc/ciecl-en.R |only ciecl-0.9.2/ciecl/inst/doc/ciecl-en.Rmd |only ciecl-0.9.2/ciecl/inst/doc/ciecl-en.html |only ciecl-0.9.2/ciecl/man/generar_cie10_cl.Rd |only ciecl-0.9.2/ciecl/tools |only ciecl-0.9.2/ciecl/vignettes/ciecl-en.Rmd |only ciecl-0.9.6/ciecl/DESCRIPTION | 27 ciecl-0.9.6/ciecl/MD5 | 122 +- ciecl-0.9.6/ciecl/NAMESPACE | 6 ciecl-0.9.6/ciecl/NEWS.md | 83 + ciecl-0.9.6/ciecl/R/cie-api.R | 54 ciecl-0.9.6/ciecl/R/cie-comorbid.R | 55 ciecl-0.9.6/ciecl/R/cie-data.R | 51 ciecl-0.9.6/ciecl/R/cie-search.R | 669 +++++++++--- ciecl-0.9.6/ciecl/R/cie-sql.R | 305 ++++- ciecl-0.9.6/ciecl/R/cie-table.R | 24 ciecl-0.9.6/ciecl/R/cie-utils.R | 124 +- ciecl-0.9.6/ciecl/R/ciecl-package.R |only ciecl-0.9.6/ciecl/R/zzz.R |only ciecl-0.9.6/ciecl/README.md | 345 +++--- ciecl-0.9.6/ciecl/build/vignette.rds |binary ciecl-0.9.6/ciecl/inst/CITATION | 19 ciecl-0.9.6/ciecl/inst/doc/caso-uso-egresos.R |only ciecl-0.9.6/ciecl/inst/doc/caso-uso-egresos.Rmd |only ciecl-0.9.6/ciecl/inst/doc/caso-uso-egresos.html |only ciecl-0.9.6/ciecl/inst/doc/ciecl-es.R |only ciecl-0.9.6/ciecl/inst/doc/ciecl-es.Rmd |only ciecl-0.9.6/ciecl/inst/doc/ciecl-es.html |only ciecl-0.9.6/ciecl/inst/doc/ciecl.R | 58 - ciecl-0.9.6/ciecl/inst/doc/ciecl.Rmd | 82 - ciecl-0.9.6/ciecl/inst/doc/ciecl.html | 156 +- ciecl-0.9.6/ciecl/inst/doc/idiomas.Rmd | 2 ciecl-0.9.6/ciecl/inst/doc/idiomas.html | 6 ciecl-0.9.6/ciecl/inst/doc/instalacion.html | 4 ciecl-0.9.6/ciecl/man/cie10_cl.Rd | 2 ciecl-0.9.6/ciecl/man/cie10_clear_cache.Rd | 49 ciecl-0.9.6/ciecl/man/cie10_disconnect.Rd |only ciecl-0.9.6/ciecl/man/cie10_sql.Rd | 72 - ciecl-0.9.6/ciecl/man/cie11_search.Rd | 78 - ciecl-0.9.6/ciecl/man/cie_comorbid.Rd | 78 - ciecl-0.9.6/ciecl/man/cie_expand.Rd | 49 ciecl-0.9.6/ciecl/man/cie_guia_busqueda.Rd | 44 ciecl-0.9.6/ciecl/man/cie_lookup.Rd | 38 ciecl-0.9.6/ciecl/man/cie_map_comorbid.Rd | 49 ciecl-0.9.6/ciecl/man/cie_normalizar.Rd | 107 + ciecl-0.9.6/ciecl/man/cie_search.Rd | 139 +- ciecl-0.9.6/ciecl/man/cie_siglas.Rd | 73 - ciecl-0.9.6/ciecl/man/cie_table.Rd | 53 ciecl-0.9.6/ciecl/man/cie_validate_vector.Rd | 53 ciecl-0.9.6/ciecl/man/ciecl-package.Rd |only ciecl-0.9.6/ciecl/man/figures/logo.png |only ciecl-0.9.6/ciecl/tests/testthat/setup.R | 49 ciecl-0.9.6/ciecl/tests/testthat/test-api-mock.R | 278 +++- ciecl-0.9.6/ciecl/tests/testthat/test-cie-api.R | 416 +++---- ciecl-0.9.6/ciecl/tests/testthat/test-cie-comorbid.R | 29 ciecl-0.9.6/ciecl/tests/testthat/test-cie-data.R | 508 +++++---- ciecl-0.9.6/ciecl/tests/testthat/test-cie-search.R | 332 +++-- ciecl-0.9.6/ciecl/tests/testthat/test-cie-sql.R | 595 +++++++--- ciecl-0.9.6/ciecl/tests/testthat/test-cie-table.R | 17 ciecl-0.9.6/ciecl/tests/testthat/test-cie-utils.R | 224 ++-- ciecl-0.9.6/ciecl/tests/testthat/test-comorbid-validation.R | 16 ciecl-0.9.6/ciecl/tests/testthat/test-data-integrity.R | 16 ciecl-0.9.6/ciecl/tests/testthat/test-edge-cases.R | 54 ciecl-0.9.6/ciecl/tests/testthat/test-encoding.R | 24 ciecl-0.9.6/ciecl/tests/testthat/test-integration.R | 30 ciecl-0.9.6/ciecl/tests/testthat/test-performance-scale.R |only ciecl-0.9.6/ciecl/tests/testthat/test-robustness.R | 78 - ciecl-0.9.6/ciecl/tests/testthat/test-utils-internal.R | 30 ciecl-0.9.6/ciecl/vignettes/caso-uso-egresos.Rmd |only ciecl-0.9.6/ciecl/vignettes/ciecl-es.Rmd |only ciecl-0.9.6/ciecl/vignettes/ciecl.Rmd | 82 - ciecl-0.9.6/ciecl/vignettes/idiomas.Rmd | 2 72 files changed, 3650 insertions(+), 2206 deletions(-)
Title: Functional Utilities for Data Processing
Description: Covers several areas of data processing: batch-splitting, reading and writing of large
data files, data tiling, one-hot encoding and decoding of data tiles, stratified proportional
(random or probabilistic) data sampling, data normalization and thresholding, substring location
and commonalities inside strings and location and tabulation of amino acids, modifications or
associated monoisotopic masses inside modified peptides. The extractor utility implements code from
'Matrix.utils', Varrichio C (2020), <https://cran.r-project.org/package=Matrix.utils>.
Author: Dragos Bandur [aut, cre]
Maintainer: Dragos Bandur <dbandur@sympatico.ca>
Diff between akin versions 0.2.1 dated 2026-04-17 and 0.3.0 dated 2026-04-19
DESCRIPTION | 6 +++--- MD5 | 15 +++++++++------ NAMESPACE | 1 + NEWS.md | 4 ++++ R/core.R |only R/fcommon.R |only R/tileD.R | 2 +- R/utils.R | 10 ++++++++++ man/fcommon.Rd |only man/tileData.Rd | 2 +- 10 files changed, 29 insertions(+), 11 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-04-17 0.1.3
2025-10-29 0.1.2
2025-04-10 0.1.1
Title: Nonparametric Estimators for Covariance Functions
Description: Several nonparametric estimators of autocovariance functions. Procedures for constructing their confidence regions by using bootstrap techniques. Methods to correct autocovariance estimators and several tools for analysing and comparing them. Supplementary functions, including kernel computations and discrete cosine Fourier transforms. For more details see Bilchouris and Olenko (2025) <doi:10.17713/ajs.v54i1.1975>.
Author: Adam Bilchouris [cre, aut] ,
Andriy Olenko [aut]
Maintainer: Adam Bilchouris <adam.bilchouris@gmail.com>
Diff between CovEsts versions 1.0.0 dated 2025-09-10 and 1.1.0 dated 2026-04-19
CovEsts-1.0.0/CovEsts/man/get_tau.Rd |only CovEsts-1.0.0/CovEsts/man/kernel.Rd |only CovEsts-1.0.0/CovEsts/man/kernel_symm.Rd |only CovEsts-1.0.0/CovEsts/man/taper_single.Rd |only CovEsts-1.0.0/CovEsts/man/tapered_single.Rd |only CovEsts-1.0.0/CovEsts/man/window.Rd |only CovEsts-1.0.0/CovEsts/man/window_symm.Rd |only CovEsts-1.1.0/CovEsts/DESCRIPTION | 7 CovEsts-1.1.0/CovEsts/MD5 | 131 - CovEsts-1.1.0/CovEsts/NAMESPACE | 63 CovEsts-1.1.0/CovEsts/R/B_splines_est.R | 662 +++----- CovEsts-1.1.0/CovEsts/R/block_bootstrap.R | 178 +- CovEsts-1.1.0/CovEsts/R/corrected_standard_estimator.R | 528 +++--- CovEsts-1.1.0/CovEsts/R/deprecated.R |only CovEsts-1.1.0/CovEsts/R/kernel_regression_estimator.R | 288 ++- CovEsts-1.1.0/CovEsts/R/kernels.R | 579 +++---- CovEsts-1.1.0/CovEsts/R/metrics.R | 810 +++++---- CovEsts-1.1.0/CovEsts/R/plotting.R |only CovEsts-1.1.0/CovEsts/R/standard_est.R | 361 ++-- CovEsts-1.1.0/CovEsts/R/tapered_estimator.R | 365 +--- CovEsts-1.1.0/CovEsts/R/windows.R | 447 ++--- CovEsts-1.1.0/CovEsts/man/CovEsts-deprecated.Rd |only CovEsts-1.1.0/CovEsts/man/H2n.Rd | 71 CovEsts-1.1.0/CovEsts/man/Xij_mat.Rd | 60 CovEsts-1.1.0/CovEsts/man/adjusted_est.Rd | 177 +- CovEsts-1.1.0/CovEsts/man/adjusted_spline.Rd | 78 CovEsts-1.1.0/CovEsts/man/area_between.Rd | 95 - CovEsts-1.1.0/CovEsts/man/as.double.CovEsts.Rd |only CovEsts-1.1.0/CovEsts/man/block_bootstrap.Rd | 66 CovEsts-1.1.0/CovEsts/man/bootstrap_sample.Rd | 76 CovEsts-1.1.0/CovEsts/man/check_pd.Rd | 86 - CovEsts-1.1.0/CovEsts/man/corrected_est.Rd | 170 +- CovEsts-1.1.0/CovEsts/man/cyclic_matrix.Rd | 68 CovEsts-1.1.0/CovEsts/man/generate_knots.Rd | 56 CovEsts-1.1.0/CovEsts/man/get_taus.Rd | 56 CovEsts-1.1.0/CovEsts/man/hilbert_schmidt.Rd | 91 - CovEsts-1.1.0/CovEsts/man/kernel_ec.Rd |only CovEsts-1.1.0/CovEsts/man/kernel_est.Rd | 148 + CovEsts-1.1.0/CovEsts/man/kernel_symm_ec.Rd |only CovEsts-1.1.0/CovEsts/man/lines.BootEsts.Rd |only CovEsts-1.1.0/CovEsts/man/lines.CovEsts.Rd |only CovEsts-1.1.0/CovEsts/man/lines.VarioEsts.Rd |only CovEsts-1.1.0/CovEsts/man/make_pd.Rd | 23 CovEsts-1.1.0/CovEsts/man/max_distance.Rd | 89 - CovEsts-1.1.0/CovEsts/man/mse.Rd | 75 CovEsts-1.1.0/CovEsts/man/nearest_pd.Rd | 91 - CovEsts-1.1.0/CovEsts/man/normalise_acf.Rd |only CovEsts-1.1.0/CovEsts/man/plot.BootEsts.Rd |only CovEsts-1.1.0/CovEsts/man/plot.CovEsts.Rd |only CovEsts-1.1.0/CovEsts/man/plot.VarioEsts.Rd |only CovEsts-1.1.0/CovEsts/man/print.BootEsts.Rd |only CovEsts-1.1.0/CovEsts/man/print.CovEsts.Rd |only CovEsts-1.1.0/CovEsts/man/print.VarioEsts.Rd |only CovEsts-1.1.0/CovEsts/man/rho_T1.Rd | 138 - CovEsts-1.1.0/CovEsts/man/shrinking.Rd | 102 - CovEsts-1.1.0/CovEsts/man/solve_shrinking.Rd | 64 CovEsts-1.1.0/CovEsts/man/solve_spline.Rd | 104 - CovEsts-1.1.0/CovEsts/man/spectral_norm.Rd | 103 - CovEsts-1.1.0/CovEsts/man/splines_df.Rd | 64 CovEsts-1.1.0/CovEsts/man/splines_est.Rd | 160 + CovEsts-1.1.0/CovEsts/man/standard_est.Rd | 119 - CovEsts-1.1.0/CovEsts/man/starting_locs.Rd | 2 CovEsts-1.1.0/CovEsts/man/taper.Rd | 84 - CovEsts-1.1.0/CovEsts/man/tapered_est.Rd | 123 - CovEsts-1.1.0/CovEsts/man/to_pacf.Rd | 68 CovEsts-1.1.0/CovEsts/man/to_vario.Rd | 87 - CovEsts-1.1.0/CovEsts/man/truncated_est.Rd | 216 +- CovEsts-1.1.0/CovEsts/man/window_ec.Rd |only CovEsts-1.1.0/CovEsts/man/window_symm_ec.Rd |only CovEsts-1.1.0/CovEsts/tests/testthat/test-B_splines_est.R | 559 +++--- CovEsts-1.1.0/CovEsts/tests/testthat/test-block_bootstrap.R | 394 ++-- CovEsts-1.1.0/CovEsts/tests/testthat/test-corrected_standard_estimator.R | 428 ++--- CovEsts-1.1.0/CovEsts/tests/testthat/test-kernel_regression_estimator.R | 819 +++++----- CovEsts-1.1.0/CovEsts/tests/testthat/test-kernels.R | 374 ++-- CovEsts-1.1.0/CovEsts/tests/testthat/test-metrics.R | 543 +++--- CovEsts-1.1.0/CovEsts/tests/testthat/test-standard_est.R | 205 +- CovEsts-1.1.0/CovEsts/tests/testthat/test-symmetric_kernels.R | 161 + CovEsts-1.1.0/CovEsts/tests/testthat/test-tapered_estimator.R | 421 ++--- CovEsts-1.1.0/CovEsts/tests/testthat/test-windows.R | 291 +-- 79 files changed, 6174 insertions(+), 5450 deletions(-)
Title: Standardized Processing and Analysis of Thermal Imaging Data in
Animal Studies
Description: A modular framework for standardized analysis of thermal imaging data in
animal experimentation. The package integrates thermographic data import
(FLIR, raw, CSV), automated region of interest (ROI) segmentation based on
'EBImage' (Pau et al., 2010 <doi:10.1093/bioinformatics/btq046>), interactive
ROI refinement, and high-throughput batch processing.
Author: BeiHao Li [aut, cre]
Maintainer: BeiHao Li <szright2000@gmail.com>
Diff between BioThermR versions 0.1.0 dated 2026-01-21 and 0.1.1 dated 2026-04-19
DESCRIPTION | 12 MD5 | 25 - NAMESPACE | 30 + R/analysis.r | 681 ++++++++++++++++++++++++++++++++++++- R/visualization.r | 327 +++++++++++++++++ README.md | 17 build/vignette.rds |binary inst/doc/BioThermR_case_study.R |only inst/doc/BioThermR_case_study.Rmd |only inst/doc/BioThermR_case_study.html |only inst/doc/QuickStart.html | 58 +-- inst/extdata/group.csv |only man/analyze_thermal_stats.Rd | 6 man/assess_replicates.Rd |only man/correlate_thermal_traits.Rd |only man/viz_cor_heatmap.Rd |only man/viz_cor_scatter.Rd |only vignettes/BioThermR_case_study.Rmd |only 18 files changed, 1095 insertions(+), 61 deletions(-)
Title: 'SAS' IF Style Data Step Logic for Data Tables
Description: Provides 'SAS'-style IF/ELSE chains, independent IF rules,
and DELETE logic for 'data.table', enabling clinical programmers to
express Study Data Tabulation Model (SDTM) and Analysis Data Model
(ADaM)-style derivations in familiar SAS-like syntax.
Methods are informed by clinical data standards described in CDISC
SDTM and ADaM implementation guides. See
<https://www.cdisc.org/standards/foundational/sdtm> and
<https://www.cdisc.org/standards/foundational/adam>.
Author: Thiyagarajan Chandrasekaran [aut, cre]
Maintainer: Thiyagarajan Chandrasekaran <chandrt23@gmail.com>
Diff between sasif versions 0.1.2 dated 2026-02-03 and 0.1.3 dated 2026-04-19
DESCRIPTION | 12 +++++++++--- MD5 | 11 ++++++++++- NEWS.md |only README.md |only build |only inst |only tests |only vignettes |only 8 files changed, 19 insertions(+), 4 deletions(-)
Title: Fast Unified Random Forests for Survival, Regression, and
Classification (RF-SRC)
Description: Fast OpenMP parallel computing of Breiman's random forests for univariate, multivariate, unsupervised, survival, competing risks, class imbalanced classification and quantile regression. New Mahalanobis splitting for correlated outcomes. Extreme random forests and randomized splitting. Suite of imputation methods for missing data. Fast random forests using subsampling. Confidence regions and standard errors for variable importance. New improved holdout importance. Case-specific importance. Minimal depth variable importance. Visualize trees on your Safari or Google Chrome browser. Anonymous random forests for data privacy.
Author: Hemant Ishwaran [aut],
Udaya B. Kogalur [aut, cre]
Maintainer: Udaya B. Kogalur <ubk@kogalur.com>
Diff between randomForestSRC versions 3.6.1 dated 2026-04-10 and 3.6.2 dated 2026-04-19
randomForestSRC-3.6.1/randomForestSRC/R/utilities_impute.learn.R |only randomForestSRC-3.6.2/randomForestSRC/DESCRIPTION | 8 randomForestSRC-3.6.2/randomForestSRC/MD5 | 18 - randomForestSRC-3.6.2/randomForestSRC/NEWS.md | 35 +- randomForestSRC-3.6.2/randomForestSRC/R/generic.predict.rfsrc.R | 2 randomForestSRC-3.6.2/randomForestSRC/R/impute.learn.rfsrc.R | 136 ++++++- randomForestSRC-3.6.2/randomForestSRC/R/rfsrc.R | 4 randomForestSRC-3.6.2/randomForestSRC/R/utilities_impute_learn.R |only randomForestSRC-3.6.2/randomForestSRC/data/follic.rda |binary randomForestSRC-3.6.2/randomForestSRC/data/peakVO2.rda |binary randomForestSRC-3.6.2/randomForestSRC/man/impute.learn.rfsrc.Rd | 174 +++++++--- 11 files changed, 285 insertions(+), 92 deletions(-)
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Title: Explore Catálogo Taxônomico da Fauna do Brasil Database
Description: A collection of functions designed to retrieve, filter and spatialize data from the Catálogo Taxônomico da Fauna do Brasil. For more information about the dataset, please visit <https://fauna.jbrj.gov.br/fauna/listaBrasil/>.
Author: Weverton Trindade [aut, cre]
Maintainer: Weverton Trindade <wevertonf1993@gmail.com>
Diff between faunabr versions 1.0.0 dated 2025-10-20 and 1.0.1 dated 2026-04-19
DESCRIPTION | 8 ++++---- MD5 | 35 ++++++++++++++++++----------------- NEWS.md | 4 ++++ R/filter_faunabr.R | 2 +- R/helpers.R | 24 ++++++++++++++++-------- README.md | 18 +++++++++++++++++- inst/CITATION |only inst/doc/Spatialize_faunabr.html | 5 +++-- inst/doc/espacializando_faunabr.html | 5 +++-- inst/doc/getting_pam.html | 5 +++-- inst/doc/getting_started.Rmd | 4 ++-- inst/doc/getting_started.html | 9 +++++---- inst/doc/obtendo_pam.html | 5 +++-- inst/doc/primeiros_passos.Rmd | 4 ++-- inst/doc/primeiros_passos.html | 9 +++++---- inst/doc/selecionando_especies.html | 5 +++-- inst/doc/selecting_species.html | 5 +++-- vignettes/getting_started.Rmd | 4 ++-- vignettes/primeiros_passos.Rmd | 4 ++-- 19 files changed, 96 insertions(+), 59 deletions(-)
Title: Data Published by the United States Federal Energy Regulatory
Commission
Description: Data published by the United States Federal Energy Regulatory Commission including
electric company financial data, natural gas company financial data,
hydropower plant data, liquified natural gas plant data, oil company financial data
natural gas company financial data, and natural gas storage field data.
Author: Paul Govan [aut, cre, cph]
Maintainer: Paul Govan <paul.govan2@gmail.com>
Diff between energyr versions 0.2 dated 2025-11-23 and 0.4 dated 2026-04-19
DESCRIPTION | 10 +++++----- MD5 | 36 ++++++++++++++++++------------------ NEWS.md | 8 ++++++++ R/electric.R | 2 +- R/gas.R | 2 +- R/hydropower.R | 6 ++++-- R/lng.R | 2 +- R/oil.R | 2 +- R/pipeline.R | 2 +- R/storage.R | 2 +- data/electric.rda |binary data/gas.rda |binary data/hydropower.rda |binary data/lng.rda |binary data/oil.rda |binary data/pipeline.rda |binary data/storage.rda |binary tests/testthat/test-hydro.R | 2 +- tests/testthat/test-storage.R | 2 +- 19 files changed, 43 insertions(+), 33 deletions(-)
Title: Detect and Check for Separation and Infinite Maximum Likelihood
Estimates
Description: Provides pre-fit and post-fit methods for detecting separation and infinite maximum likelihood estimates in generalized linear models with categorical responses. The pre-fit methods apply on binomial-response generalized liner models such as logit, probit and cloglog regression, and can be directly supplied as fitting methods to the glm() function. They solve the linear programming problems for the detection of separation developed in Konis (2007, <https://ora.ox.ac.uk/objects/uuid:8f9ee0d0-d78e-4101-9ab4-f9cbceed2a2a>) using 'ROI' <https://cran.r-project.org/package=ROI> or 'lpSolveAPI' <https://cran.r-project.org/package=lpSolveAPI>. The post-fit methods apply to models with categorical responses, including binomial-response generalized linear models and multinomial-response models, such as baseline category logits and adjacent category logits models; for example, the models implemented in the 'brglm2' <https://cran.r-project.org/package=brglm2> package. The p [...truncated...]
Author: Ioannis Kosmidis [aut, cre] ,
Dirk Schumacher [aut],
Florian Schwendinger [aut],
Kjell Konis [ctb]
Maintainer: Ioannis Kosmidis <ioannis.kosmidis@warwick.ac.uk>
Diff between detectseparation versions 0.3 dated 2022-08-26 and 0.4.0 dated 2026-04-19
detectseparation-0.3/detectseparation/man/figures/README-unnamed-chunk-5-1.png |only detectseparation-0.4.0/detectseparation/DESCRIPTION | 11 detectseparation-0.4.0/detectseparation/MD5 | 54 - detectseparation-0.4.0/detectseparation/NEWS.md | 23 detectseparation-0.4.0/detectseparation/R/check_infinite_estimates.R | 46 - detectseparation-0.4.0/detectseparation/R/data.R | 100 +- detectseparation-0.4.0/detectseparation/R/detect_infinite_estimates.R | 77 +- detectseparation-0.4.0/detectseparation/R/detect_separation.R | 216 +++-- detectseparation-0.4.0/detectseparation/R/detectseparation-package.R | 11 detectseparation-0.4.0/detectseparation/R/linear_programs.R | 56 + detectseparation-0.4.0/detectseparation/README.md | 76 + detectseparation-0.4.0/detectseparation/build/partial.rdb |binary detectseparation-0.4.0/detectseparation/build/vignette.rds |binary detectseparation-0.4.0/detectseparation/inst/doc/infinite_estimates.R | 18 detectseparation-0.4.0/detectseparation/inst/doc/infinite_estimates.html | 381 +++++----- detectseparation-0.4.0/detectseparation/inst/doc/separation.R | 16 detectseparation-0.4.0/detectseparation/inst/doc/separation.html | 375 ++++----- detectseparation-0.4.0/detectseparation/inst/tinytest/test-detect-separation-ROI.R | 40 + detectseparation-0.4.0/detectseparation/inst/tinytest/test-detect-separation-control.R | 3 detectseparation-0.4.0/detectseparation/man/check_infinite_estimates.Rd | 2 detectseparation-0.4.0/detectseparation/man/check_infinite_estimates.glm.Rd | 37 detectseparation-0.4.0/detectseparation/man/detect_infinite_estimates.Rd | 53 - detectseparation-0.4.0/detectseparation/man/detect_separation.Rd | 102 +- detectseparation-0.4.0/detectseparation/man/detect_separation_control.Rd | 82 +- detectseparation-0.4.0/detectseparation/man/detectseparation.Rd | 22 detectseparation-0.4.0/detectseparation/man/endometrial.Rd | 44 - detectseparation-0.4.0/detectseparation/man/figures/README-unnamed-chunk-7-1.png |only detectseparation-0.4.0/detectseparation/man/lizards.Rd | 39 - detectseparation-0.4.0/detectseparation/man/silvapulle1981.Rd | 13 29 files changed, 1090 insertions(+), 807 deletions(-)
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