Title: Density and Abundance from Distance-Sampling Surveys
Description: Distance-sampling (<doi:10.1007/978-3-319-19219-2>)
is a field survey and analytical method that estimates density and
abundance of survey targets (e.g., animals) when
detection probability declines with observation distance.
Distance-sampling is popular in ecology,
especially when survey targets are observed from aerial platforms (e.g.,
airplane or drone), surface vessels (e.g., boat or truck), or along
walking transects. Analysis involves fitting smooth (parametric) curves to
histograms of observation distances and using those functions to
adjust density estimates for missed targets. Routines included here
fit curves to observation distance histograms, estimate effective
sampling area, density of targets in surveyed areas, and the abundance
of targets in a surrounding study area. Confidence interval estimation
uses built-in bootstrap resampling. Help files are extensive and have been
vetted by multiple authors. Many tutorials are available on the package's
website (URL below).
Author: Trent McDonald [cre, aut],
Jason Carlisle [aut],
Aidan McDonald [aut] ,
Ryan Nielson [ctb] ,
Ben Augustine [ctb] ,
James Griswald [ctb] ,
Patrick McKann [ctb] ,
Lacey Jeroue [ctb] ,
Hoffman Abigail [ctb] ,
Kleinsausser Michael [ctb] ,
Joel Reynolds [ [...truncated...]
Maintainer: Trent McDonald <trent@mcdonalddatasciences.com>
Diff between Rdistance versions 4.3.1 dated 2026-02-11 and 4.4.0 dated 2026-04-22
DESCRIPTION | 10 +- MD5 | 90 ++++++++++-------- NAMESPACE | 10 ++ NEWS.md | 21 ++++ R/GammaModes.R | 2 R/Optim.R | 48 ++++++--- R/RdistanceControls.R | 36 +++++-- R/abundEstim.R | 1 R/autoDistSamp.R | 5 - R/dE.single.R | 208 +++++++++++++++++++----------------------- R/differentiableLikelihoods.R | 4 R/expandW.R |only R/expansionTerms.R | 10 +- R/halfnorm.like.R | 28 ++--- R/huber.cumFunc.R |only R/huber.like.R |only R/huber.start.limits.R |only R/insertOneStepBreaks.R | 2 R/integrateDfuncs.R | 28 ++++- R/integrateHuberLines.R |only R/integrateKey.R | 24 +++- R/integrateNumeric.R | 30 ++++-- R/integrateOneStepNumeric.R | 2 R/integrateTriangleLines.R |only R/likeParamNames.r | 42 +++----- R/mlEstimates.R | 1 R/nLL.R | 180 ++++++++++++++++++++---------------- R/oneStep.start.limits.R | 12 +- R/predDfuncs.R | 19 +-- R/setOptimizer.R |only R/triangle.like.R |only R/triangle.start.limits.R |only R/zzz.R | 4 man/Gamma.like.Rd | 28 ++--- man/Rdistance-package.Rd | 2 man/RdistanceControls.Rd | 36 +++++-- man/abundEstim.Rd | 1 man/autoDistSamp.Rd | 13 ++ man/dE.multi.Rd | 177 +++++++++++++++++------------------ man/dE.single.Rd | 177 +++++++++++++++++------------------ man/dfuncEstim.Rd | 177 +++++++++++++++++------------------ man/expandW.Rd |only man/halfnorm.like.Rd | 28 ++--- man/hazrate.like.Rd | 28 ++--- man/huber.cumFunc.Rd |only man/huber.like.Rd |only man/huber.start.limits.Rd |only man/integrateHuberLines.Rd |only man/integrateTriangleLines.Rd |only man/likeParamNames.Rd | 22 +--- man/negexp.like.Rd | 28 ++--- man/oneStep.like.Rd | 28 ++--- man/setOptimizer.Rd |only man/triangle.like.Rd |only man/triangle.start.limits.Rd |only 55 files changed, 841 insertions(+), 721 deletions(-)
Title: Interface (Wrapper) to MPI (Message-Passing Interface)
Description: An interface (wrapper) to MPI. It also
provides interactive R manager and worker environment.
Author: Hao Yu [aut, cre]
Maintainer: Hao Yu <hyu@stats.uwo.ca>
Diff between Rmpi versions 0.7-3.1 dated 2025-01-13 and 0.7-3.4 dated 2026-04-22
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/zzz.R | 2 +- configure | 9 +++++---- configure.ac | 9 +++++---- 5 files changed, 19 insertions(+), 17 deletions(-)
Title: Nanosecond-Resolution Time Support for R
Description: Full 64-bit resolution date and time functionality with
nanosecond granularity is provided, with easy transition to and from
the standard 'POSIXct' type. Three additional classes offer interval,
period and duration functionality for nanosecond-resolution timestamps.
Author: Dirk Eddelbuettel [aut, cre] ,
Leonardo Silvestri [aut]
Maintainer: Dirk Eddelbuettel <edd@debian.org>
Diff between nanotime versions 0.3.13 dated 2026-03-09 and 0.3.14 dated 2026-04-22
ChangeLog | 38 +++++++++++++++++++++++++++++++++++++- DESCRIPTION | 10 +++++----- MD5 | 26 +++++++++++++------------- R/nanoduration.R | 9 +-------- R/nanotime.R | 14 +++++++++++--- build/vignette.rds |binary inst/NEWS.Rd | 15 +++++++++++++++ inst/doc/nanotime-intro.pdf |binary inst/tinytest/test_nanoduration.R | 12 +++++++----- inst/tinytest/test_nanoival.R | 7 ++++++- inst/tinytest/test_nanoperiod.R | 2 +- inst/tinytest/test_nanotime.R | 2 +- inst/tinytest/test_ops.R | 2 +- tests/tinytest.R | 13 +------------ 14 files changed, 99 insertions(+), 51 deletions(-)
Title: Fast Creation of Dummy (Binary) Columns and Rows from
Categorical Variables
Description: Creates dummy columns from columns that have categorical variables (character or factor types). You can also specify which columns to make dummies out of, or which columns to ignore. Also creates dummy rows from character, factor, and Date columns. This package provides a significant speed increase from creating dummy variables through model.matrix().
Author: Jacob Kaplan [aut, cre] ,
Benjamin Schlegel [ctb]
Maintainer: Jacob Kaplan <jkkaplan6@gmail.com>
Diff between fastDummies versions 1.7.5 dated 2025-01-20 and 1.7.6 dated 2026-04-22
DESCRIPTION | 11 ++++++----- MD5 | 16 ++++++++-------- NEWS.md | 3 +++ R/dummy_cols.R | 5 +++++ R/dummy_rows.R | 5 +++++ build/vignette.rds |binary inst/doc/making-dummy-rows.html | 9 +++++---- inst/doc/making-dummy-variables.html | 9 +++++---- tests/testthat/test-return-type.R | 16 ++++++++++++++++ 9 files changed, 53 insertions(+), 21 deletions(-)
Title: 'Praat Picture' Style Plots of Acoustic Data
Description: Quickly and easily generate plots of acoustic data aligned with transcriptions similar to those made in 'Praat' using either derived signals generated directly in R with 'wrassp' or imported derived signals from 'Praat'. Provides easy and fast out-of-the-box solutions but also a high extent of flexibility. Also provides options for embedding audio in figures and animating figures.
Author: Rasmus Puggaard-Rode [aut, cre, cph]
Maintainer: Rasmus Puggaard-Rode <rasmus.puggaard-rode@ling-phil.ox.ac.uk>
Diff between praatpicture versions 1.7.0 dated 2025-12-08 and 1.8.0 dated 2026-04-22
DESCRIPTION | 6 MD5 | 44 ++--- NEWS.md | 18 ++ R/formantplot.R | 143 +++++++++++------- R/intensity_overlay.R | 60 ++++--- R/intensityplot.R | 56 ++++--- R/pitch_overlay.R | 111 ++++++++------ R/pitchplot.R | 110 ++++++++------ R/praatpicture.R | 107 ++++++++++--- R/specplot.R | 251 +++++++++++++++++++------------- R/talking_praatpicture.R | 65 +++++++- R/tgplot.R | 343 ++++++++++++++++++++++---------------------- R/waveplot.R | 70 +++++--- man/formantplot.Rd | 3 man/intensity_overlay.Rd | 3 man/intensityplot.Rd | 3 man/pitch_overlay.Rd | 3 man/pitchplot.Rd | 3 man/praatpicture.Rd | 31 ++- man/specplot.Rd | 3 man/talking_praatpicture.Rd | 43 +++++ man/tgplot.Rd | 3 man/waveplot.Rd | 13 + 23 files changed, 946 insertions(+), 546 deletions(-)
Title: 'GGML' Tensor Operations for Machine Learning
Description: Provides 'R' bindings to the 'GGML' tensor library for machine
learning, optimized for 'Vulkan' GPU acceleration with a transparent CPU
fallback. The package features a 'Keras'-like sequential API and a
'PyTorch'-style 'autograd' engine for building, training, and deploying
neural networks. Key capabilities include high-performance 5D tensor
operations, 'f16' precision, and efficient quantization. It supports
native 'ONNX' model import (50+ operators) and 'GGUF' weight loading
from the 'llama.cpp' and 'Hugging Face' ecosystems. Designed for
zero-overhead inference via dedicated weight buffering, it integrates
seamlessly as a 'parsnip' engine for 'tidymodels' and provides
first-class learners for the 'mlr3' framework.
See <https://github.com/ggml-org/ggml> for more information about the
underlying library.
Author: Yuri Baramykov [aut, cre],
Georgi Gerganov [ctb, cph] ,
Jeffrey Quesnelle [ctb, cph] ,
Bowen Peng [ctb, cph] ,
Mozilla Foundation [ctb, cph]
Maintainer: Yuri Baramykov <lbsbmsu@mail.ru>
Diff between ggmlR versions 0.7.5 dated 2026-04-20 and 0.7.6 dated 2026-04-22
ggmlR-0.7.5/ggmlR/man/LearnerClassifGGML.Rd |only ggmlR-0.7.5/ggmlR/man/LearnerRegrGGML.Rd |only ggmlR-0.7.6/ggmlR/DESCRIPTION | 10 +++---- ggmlR-0.7.6/ggmlR/MD5 | 18 +++++------- ggmlR-0.7.6/ggmlR/NEWS.md | 5 +++ ggmlR-0.7.6/ggmlR/R/LearnerClassifGGML.R | 4 +- ggmlR-0.7.6/ggmlR/R/LearnerRegrGGML.R | 4 +- ggmlR-0.7.6/ggmlR/R/zzz.R | 32 +++++++++-------------- ggmlR-0.7.6/ggmlR/inst/doc/gpu-vulkan.html | 8 ++--- ggmlR-0.7.6/ggmlR/inst/doc/keras-like-api.html | 2 - ggmlR-0.7.6/ggmlR/inst/doc/mlr3-integration.html | 4 +- 11 files changed, 42 insertions(+), 45 deletions(-)
Title: Models, Datasets and Transformations for Images
Description: Provides access to datasets, models and preprocessing
facilities for deep learning with images. Integrates seamlessly
with the 'torch' package and its API borrows heavily from
the 'PyTorch' vision package.
Author: Tomasz Kalinowski [ctb, cre],
Daniel Falbel [aut, cph],
Christophe Regouby [ctb],
Akanksha Koshti [ctb],
Derrick Richard [ctb],
ANAMASGARD [ctb],
Chandraveer Singh [ctb],
Posit Software, PBC [cph, fnd]
Maintainer: Tomasz Kalinowski <tomasz@posit.co>
Diff between torchvision versions 0.8.0 dated 2025-11-06 and 0.9.0 dated 2026-04-22
torchvision-0.8.0/torchvision/R/imagenet.R |only torchvision-0.8.0/torchvision/R/tiny-imagenet-dataset.R |only torchvision-0.8.0/torchvision/tests/testthat/test-transforms.R |only torchvision-0.9.0/torchvision/DESCRIPTION | 93 - torchvision-0.9.0/torchvision/LICENSE | 4 torchvision-0.9.0/torchvision/MD5 | 286 +-- torchvision-0.9.0/torchvision/NAMESPACE | 35 torchvision-0.9.0/torchvision/NEWS.md | 49 torchvision-0.9.0/torchvision/R/collection-catalog.R |only torchvision-0.9.0/torchvision/R/collection-rf100-biology.R | 37 torchvision-0.9.0/torchvision/R/collection-rf100-damage.R | 4 torchvision-0.9.0/torchvision/R/collection-rf100-doc.R | 52 torchvision-0.9.0/torchvision/R/collection-rf100-infrared.R | 4 torchvision-0.9.0/torchvision/R/collection-rf100-medical.R | 4 torchvision-0.9.0/torchvision/R/collection-rf100-underwater.R | 12 torchvision-0.9.0/torchvision/R/dataset-caltech.R | 20 torchvision-0.9.0/torchvision/R/dataset-cifar.R | 7 torchvision-0.9.0/torchvision/R/dataset-coco.R | 302 ++- torchvision-0.9.0/torchvision/R/dataset-eurosat.R | 4 torchvision-0.9.0/torchvision/R/dataset-fer.R | 4 torchvision-0.9.0/torchvision/R/dataset-fgvc.R | 6 torchvision-0.9.0/torchvision/R/dataset-flickr.R | 14 torchvision-0.9.0/torchvision/R/dataset-flowers.R | 8 torchvision-0.9.0/torchvision/R/dataset-imagenet.R |only torchvision-0.9.0/torchvision/R/dataset-lfw.R | 6 torchvision-0.9.0/torchvision/R/dataset-mnist.R | 198 +- torchvision-0.9.0/torchvision/R/dataset-oxfordiiitpet.R | 29 torchvision-0.9.0/torchvision/R/dataset-pascal.R | 44 torchvision-0.9.0/torchvision/R/dataset-places365.R | 11 torchvision-0.9.0/torchvision/R/dataset-rf100-peixos.R | 8 torchvision-0.9.0/torchvision/R/dataset-vggface2.R |only torchvision-0.9.0/torchvision/R/folder-dataset.R | 10 torchvision-0.9.0/torchvision/R/globals.R | 2 torchvision-0.9.0/torchvision/R/models-convnext.R | 2 torchvision-0.9.0/torchvision/R/models-convnext_detection.R |only torchvision-0.9.0/torchvision/R/models-convnext_segmentation.R |only torchvision-0.9.0/torchvision/R/models-deeplabv3.R | 130 - torchvision-0.9.0/torchvision/R/models-efficientnet.R | 6 torchvision-0.9.0/torchvision/R/models-efficientnetv2.R | 4 torchvision-0.9.0/torchvision/R/models-facenet.R | 12 torchvision-0.9.0/torchvision/R/models-faster_rcnn.R | 862 ++++++---- torchvision-0.9.0/torchvision/R/models-fcn.R | 18 torchvision-0.9.0/torchvision/R/models-mask_rcnn.R |only torchvision-0.9.0/torchvision/R/models-maxvit.R | 2 torchvision-0.9.0/torchvision/R/models-mobilenetv3.R | 5 torchvision-0.9.0/torchvision/R/ops-boxes.R | 56 torchvision-0.9.0/torchvision/R/transforms-array.R | 26 torchvision-0.9.0/torchvision/R/transforms-defaults.R | 42 torchvision-0.9.0/torchvision/R/transforms-generics.R | 59 torchvision-0.9.0/torchvision/R/transforms-magick.R | 2 torchvision-0.9.0/torchvision/R/transforms-segmentation.R |only torchvision-0.9.0/torchvision/R/transforms-tensor.R | 126 + torchvision-0.9.0/torchvision/R/utils.R | 21 torchvision-0.9.0/torchvision/R/vision_utils.R | 111 - torchvision-0.9.0/torchvision/build |only torchvision-0.9.0/torchvision/data |only torchvision-0.9.0/torchvision/inst/doc |only torchvision-0.9.0/torchvision/inst/extdata |only torchvision-0.9.0/torchvision/inst/po/fr/LC_MESSAGES/R-torchvision.mo |binary torchvision-0.9.0/torchvision/man/caltech_classes.Rd |only torchvision-0.9.0/torchvision/man/caltech_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/cifar_datasets.Rd | 1 torchvision-0.9.0/torchvision/man/coco_classes.Rd |only torchvision-0.9.0/torchvision/man/coco_detection_dataset.Rd | 23 torchvision-0.9.0/torchvision/man/coco_segmentation_dataset.Rd |only torchvision-0.9.0/torchvision/man/collection_catalog.Rd |only torchvision-0.9.0/torchvision/man/dot-rename_mobilenet_v3_state_dict.Rd | 1 torchvision-0.9.0/torchvision/man/draw_bounding_boxes.Rd | 7 torchvision-0.9.0/torchvision/man/draw_keypoints.Rd | 8 torchvision-0.9.0/torchvision/man/draw_segmentation_masks.Rd | 4 torchvision-0.9.0/torchvision/man/eurosat_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/fer_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/fgvc_aircraft_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/flowers102_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/get_collection_catalog.Rd |only torchvision-0.9.0/torchvision/man/image_folder_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/imagenet_classes.Rd | 43 torchvision-0.9.0/torchvision/man/lfw_dataset.Rd | 3 torchvision-0.9.0/torchvision/man/list_collection_datasets.Rd |only torchvision-0.9.0/torchvision/man/mnist_dataset.Rd | 6 torchvision-0.9.0/torchvision/man/model_convnext.Rd | 2 torchvision-0.9.0/torchvision/man/model_convnext_detection.Rd |only torchvision-0.9.0/torchvision/man/model_convnext_segmentation.Rd |only torchvision-0.9.0/torchvision/man/model_deeplabv3.Rd | 120 - torchvision-0.9.0/torchvision/man/model_efficientnet.Rd | 4 torchvision-0.9.0/torchvision/man/model_efficientnet_v2.Rd | 2 torchvision-0.9.0/torchvision/man/model_facenet.Rd | 16 torchvision-0.9.0/torchvision/man/model_fasterrcnn.Rd | 117 - torchvision-0.9.0/torchvision/man/model_fcn_resnet.Rd | 1 torchvision-0.9.0/torchvision/man/model_maskrcnn.Rd |only torchvision-0.9.0/torchvision/man/model_maxvit.Rd | 2 torchvision-0.9.0/torchvision/man/model_mobilenet_v3.Rd | 4 torchvision-0.9.0/torchvision/man/oxfordiiitpet_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/oxfordiiitpet_segmentation_dataset.Rd | 19 torchvision-0.9.0/torchvision/man/pascal_voc_classes.Rd |only torchvision-0.9.0/torchvision/man/pascal_voc_datasets.Rd | 18 torchvision-0.9.0/torchvision/man/places365_dataset.Rd | 4 torchvision-0.9.0/torchvision/man/rf100_biology_collection.Rd | 8 torchvision-0.9.0/torchvision/man/rf100_damage_collection.Rd | 6 torchvision-0.9.0/torchvision/man/rf100_document_collection.Rd | 8 torchvision-0.9.0/torchvision/man/rf100_infrared_collection.Rd | 6 torchvision-0.9.0/torchvision/man/rf100_medical_collection.Rd | 6 torchvision-0.9.0/torchvision/man/rf100_peixos_segmentation_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/rf100_underwater_collection.Rd | 14 torchvision-0.9.0/torchvision/man/search_collection.Rd |only torchvision-0.9.0/torchvision/man/target_transform_coco_masks.Rd |only torchvision-0.9.0/torchvision/man/target_transform_trimap_masks.Rd |only torchvision-0.9.0/torchvision/man/tiny_imagenet_dataset.Rd | 3 torchvision-0.9.0/torchvision/man/transform_affine.Rd | 22 torchvision-0.9.0/torchvision/man/transform_perspective.Rd | 2 torchvision-0.9.0/torchvision/man/transform_random_affine.Rd | 20 torchvision-0.9.0/torchvision/man/transform_random_perspective.Rd | 2 torchvision-0.9.0/torchvision/man/transform_random_resized_crop.Rd | 2 torchvision-0.9.0/torchvision/man/transform_random_rotation.Rd | 11 torchvision-0.9.0/torchvision/man/transform_resize.Rd | 2 torchvision-0.9.0/torchvision/man/transform_resized_crop.Rd | 2 torchvision-0.9.0/torchvision/man/transform_rotate.Rd | 11 torchvision-0.9.0/torchvision/man/vggface2_dataset.Rd |only torchvision-0.9.0/torchvision/man/whoi_plankton_dataset.Rd | 1 torchvision-0.9.0/torchvision/man/whoi_small_coralnet_dataset.Rd | 1 torchvision-0.9.0/torchvision/po/R-fr.po | 175 +- torchvision-0.9.0/torchvision/po/R-torchvision.pot | 125 - torchvision-0.9.0/torchvision/tests/testthat/helper-torchvision.R | 31 torchvision-0.9.0/torchvision/tests/testthat/test-collection-catalog.R |only torchvision-0.9.0/torchvision/tests/testthat/test-collection-rf100-biology.R | 17 torchvision-0.9.0/torchvision/tests/testthat/test-collection-rf100-damage.R | 8 torchvision-0.9.0/torchvision/tests/testthat/test-collection-rf100-doc.R | 55 torchvision-0.9.0/torchvision/tests/testthat/test-collection-rf100-infrared.R | 10 torchvision-0.9.0/torchvision/tests/testthat/test-collection-rf100-medical.R | 10 torchvision-0.9.0/torchvision/tests/testthat/test-collection-rf100-underwater.R | 11 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-caltech.R | 6 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-cifar.R | 16 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-coco.R | 41 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-lfw.R | 24 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-mnist.R | 61 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-oxfordiiitpet.R | 4 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-pascal.R | 2 torchvision-0.9.0/torchvision/tests/testthat/test-dataset-vggface2.R |only torchvision-0.9.0/torchvision/tests/testthat/test-folder-dataset.R | 6 torchvision-0.9.0/torchvision/tests/testthat/test-models-alexnet.R | 5 torchvision-0.9.0/torchvision/tests/testthat/test-models-convnext_detection.R |only torchvision-0.9.0/torchvision/tests/testthat/test-models-convnext_segmentation.R |only torchvision-0.9.0/torchvision/tests/testthat/test-models-deeplabv3.R | 18 torchvision-0.9.0/torchvision/tests/testthat/test-models-efficientnet.R | 37 torchvision-0.9.0/torchvision/tests/testthat/test-models-facenet.R | 72 torchvision-0.9.0/torchvision/tests/testthat/test-models-faster_rcnn.R | 226 +- torchvision-0.9.0/torchvision/tests/testthat/test-models-fcn.R | 6 torchvision-0.9.0/torchvision/tests/testthat/test-models-mask_rcnn.R |only torchvision-0.9.0/torchvision/tests/testthat/test-models-mobilenetv2.R | 6 torchvision-0.9.0/torchvision/tests/testthat/test-models-mobilenetv3.R | 6 torchvision-0.9.0/torchvision/tests/testthat/test-models-resnet.R | 18 torchvision-0.9.0/torchvision/tests/testthat/test-ops-box_convert.R | 10 torchvision-0.9.0/torchvision/tests/testthat/test-ops-boxes.R | 14 torchvision-0.9.0/torchvision/tests/testthat/test-rcnn-performance.R |only torchvision-0.9.0/torchvision/tests/testthat/test-segmentation-transforms.R |only torchvision-0.9.0/torchvision/tests/testthat/test-transforms-array.R |only torchvision-0.9.0/torchvision/tests/testthat/test-transforms-defaults.R | 2 torchvision-0.9.0/torchvision/tests/testthat/test-transforms-magick.R | 6 torchvision-0.9.0/torchvision/tests/testthat/test-transforms-tensor.R |only torchvision-0.9.0/torchvision/tests/testthat/test-vision-utils.R | 26 torchvision-0.9.0/torchvision/tools/convert-models.py | 12 torchvision-0.9.0/torchvision/vignettes |only 162 files changed, 2756 insertions(+), 1587 deletions(-)
Title: Fast Text Tokenization
Description: Interfaces with the 'Hugging Face' tokenizers library to provide implementations
of today's most used tokenizers such as the 'Byte-Pair Encoding' algorithm
<https://huggingface.co/docs/tokenizers/index>. It's extremely fast for both
training new vocabularies and tokenizing texts.
Author: Tomasz Kalinowski [ctb, cre],
Daniel Falbel [aut],
Regouby Christophe [ctb],
Posit [cph]
Maintainer: Tomasz Kalinowski <tomasz@posit.co>
Diff between tok versions 0.2.1 dated 2025-09-30 and 0.2.2 dated 2026-04-22
DESCRIPTION | 18 + MD5 | 25 +- NEWS.md | 6 README.md | 2 src/Makevars.in | 6 src/rust/Cargo.lock | 440 +++++++++++++++++++++++++--------------------- src/rust/Cargo.toml | 6 src/rust/src/models.rs | 20 ++ src/rust/src/tokenizer.rs | 13 + src/rust/src/trainers.rs | 2 src/rust/vendor.tar.xz |binary tests/testthat/_snaps |only tools/config.R | 37 +++ tools/vendor.sh | 12 + 14 files changed, 357 insertions(+), 230 deletions(-)
Title: Functionalities for the 'INLA' Package
Description: Contain code to work with a C struct, in short
cgeneric, to define a Gaussian Markov random (GMRF) model.
The cgeneric contain code to specify GMRF elements such as
the graph and the precision matrix, and also the initial and
prior for its parameters, useful for model inference.
It can be accessed from a C program and is the recommended
way to implement new GMRF models in the 'INLA' package
(<https://r-inla.org>).
The 'INLAtools' implement functions to evaluate
each one of the model specifications from R.
The implemented functionalities leverage the use
of 'cgeneric' models and provide a way to debug
the code as well to work with the prior for the
model parameters and to sample from it.
The `generic0` can be used to implement intrinsic models with the
scaling as proposed in
Sørbye & Rue (2014) <doi:10.1016/j.spasta.2013.06.004>,
and the required contraints.
A very useful functionality is the Kronecker product method
that creates a new model from multiple cgeneric models [...truncated...]
Author: Elias Teixeira Krainski [cre, aut, cph] ,
Finn Lindgren [aut] ,
Haavard Rue’ [aut]
Maintainer: Elias Teixeira Krainski <elias.krainski@kaust.edu.sa>
Diff between INLAtools versions 0.1.2 dated 2026-04-08 and 0.1.3 dated 2026-04-22
DESCRIPTION | 20 ++++----- MD5 | 22 +++++----- NAMESPACE | 2 R/aaa_methods.R | 3 - R/aaaaa.R |only R/cgeneric.R | 23 +---------- R/cgeneric_generic0.R | 12 ++--- R/cgeneric_utils.R | 102 ++++++++++++++++++++++++++------------------------ R/kronecker.R | 4 - R/rgeneric.R | 1 R/utils.R | 26 ++++++++++++ R/zzz.R |only src/Makevars | 2 13 files changed, 115 insertions(+), 102 deletions(-)
Title: Draw Network with Data
Description: Extends the 'ggplot2' plotting system to support network visualization. Inspired by the 'Method 1' in 'ggtree' (G Yu (2018) <doi:10.1093/molbev/msy194>), 'ggtangle' is designed to work with network associated data.
Author: Guangchuang Yu [aut, cre]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between ggtangle versions 0.1.1 dated 2026-01-16 and 0.1.2 dated 2026-04-22
DESCRIPTION | 6 +++--- MD5 | 12 ++++++------ NEWS.md | 7 +++++++ R/AllGenerics.r | 6 +++++- R/cnet.r | 5 +++++ inst/doc/ggtangle.html | 16 ++++++++-------- man/cnetplot.Rd | 11 ++++++++++- 7 files changed, 44 insertions(+), 19 deletions(-)
Title: Publication-Ready Forest Plots with 'ggplot2'
Description: Transform model coefficients into flexible forest
plots using 'ggplot2'. Provides helpers to standardize
coefficient data from a range of modelling workflows and render
publication-ready forest plots with a consistent interface.
Author: Carson Richardson [aut, cre, cph]
Maintainer: Carson Richardson <carson.richardson@outlook.com>
Diff between ggforestplotR versions 0.1.0 dated 2026-03-25 and 0.1.1 dated 2026-04-22
DESCRIPTION | 6 MD5 | 33 ++-- NEWS.md | 9 + R/add_forest_table.R | 60 ++++++- R/add_split_table.R | 86 +++++++++- R/as_forest_data.R | 34 ++-- R/ggforestplot.R | 4 R/utils.R | 230 ++++++++++++++++++---------- README.md | 2 man/add_forest_table.Rd | 23 ++ man/add_split_table.Rd | 29 +++ man/as_forest_data.Rd | 4 man/figures/ggforestplotR_logo.png |only man/ggforestplot.Rd | 4 tests/testthat/Rplots.pdf |binary tests/testthat/test-as_forest_data.R | 29 +-- tests/testthat/test-ggforestplot.R | 275 +++++++++++++++++++++++++--------- tests/testthat/test-table-contracts.R | 74 ++++----- 18 files changed, 656 insertions(+), 246 deletions(-)
Title: Simulating Climate Data for Research and Modelling
Description: Generate synthetic station-based monthly climate time-series including
temperature and rainfall, export to Network Common Data Form (NetCDF),
and provide visualization helpers for climate workflows. The approach is
inspired by statistical weather generator concepts described in Wilks (1999)
<doi:10.1016/S0168-1923(99)00037-4> and Richardson (1981) <doi:10.1029/WR017i001p00182>.
Author: Isaac Osei [aut, cre],
Acheampong Baafi-Adomako [aut]
Maintainer: Isaac Osei <ikemillar65@gmail.com>
Diff between CDSim versions 0.1.1 dated 2025-12-15 and 0.1.2 dated 2026-04-22
DESCRIPTION | 19 ++-- MD5 | 24 +++-- NAMESPACE | 14 +++ NEWS.md |only R/simulate_climate.R | 158 +++++++++++++++++++++++++++++++++------ R/utils.R | 1 R/validation.R |only build/vignette.rds |binary inst/doc/CDSim.R | 4 inst/doc/CDSim.Rmd | 19 ++++ inst/doc/CDSim.html | 158 +++++++++++++++++++++++++++++++++++---- man/simulate_climate_series.Rd | 72 ++++++++++++++++- man/validate_climate.Rd |only man/validate_climate_internal.Rd |only vignettes/CDSim.Rmd | 19 ++++ 15 files changed, 424 insertions(+), 64 deletions(-)
Title: Japanese Text Processing Tools
Description: A collection of Japanese text processing tools for filling
Japanese iteration marks, Japanese character type conversions,
segmentation by phrase, and text normalization which is based on rules
for the 'Sudachi' morphological analyzer and the 'NEologd' (Neologism
dictionary for 'MeCab'). These features are specific to Japanese and
are not implemented in 'ICU' (International Components for Unicode).
Author: Akiru Kato [cre, aut],
Koki Takahashi [cph] ,
Shuhei Iitsuka [cph] ,
Taku Kudo [cph]
Maintainer: Akiru Kato <paithiov909@gmail.com>
Diff between audubon versions 0.6.2 dated 2026-01-09 and 0.6.3 dated 2026-04-22
DESCRIPTION | 6 +++--- MD5 | 18 +++++++++--------- NEWS.md | 6 ++++++ R/labellers.R | 9 +++++---- R/strj-date.R | 2 ++ inst/packer/audubon.bundle.js | 2 +- man/label_date_jp.Rd | 4 ++-- man/label_wrap_jp.Rd | 3 ++- man/strj_parse_date.Rd | 2 ++ tests/testthat/test-labellers.R | 2 ++ 10 files changed, 34 insertions(+), 20 deletions(-)
Title: Reliability Analysis Methods for Structural Engineering
Description: Calculate the failure probability of civil engineering problems with Level I up to Level III Methods. Have fun and enjoy. References: Spaethe (1991, ISBN:3-211-82348-4) "Die Sicherheit tragender Baukonstruktionen", AU,BECK (2001) "Estimation of small failure probabilities in high dimensions by subset simulation." <doi:10.1016/S0266-8920(01)00019-4>, Breitung (1989) "Asymptotic approximations for probability integrals." <doi:10.1016/0266-8920(89)90024-6>.
Author: Konstantin Nille-Hauf [aut],
Tania Feiri [aut],
Marcus Ricker [aut],
Til Lux [aut, cre]
Maintainer: Til Lux <til.lux@tu-dortmund.de>
Diff between TesiproV versions 0.9.5 dated 2026-03-24 and 0.9.6 dated 2026-04-22
DESCRIPTION | 8 MD5 | 54 - NAMESPACE | 4 NEWS.md | 31 R/MCIS_helpers.R | 1598 +++++++++++++++++++++++++-------- R/MC_IS.R | 42 R/clsModelContainer.R | 552 +++++++++-- R/clsParam.R | 5 R/helper_debugPrint.R | 11 R/parallel_helpers.R |only R/zzz.R | 27 inst/doc/TesiproV-Vignette.R | 34 inst/doc/TesiproV-Vignette.Rmd | 130 ++ inst/doc/TesiproV-Vignette.html | 518 +++++++--- inst/extdata |only man/MC_IS_gsys.Rd |only man/MC_IS_single.Rd | 1 man/MC_IS_system.Rd | 9 man/PARAM_BASEVAR-class.Rd | 1 man/build_gsys.Rd |only man/create_rng_manager.Rd |only man/debug.print.Rd | 1 man/init_rng_master.Rd | 1 man/is_empty.Rd | 2 man/is_missing.Rd | 1 man/make_parallel_cluster.Rd |only man/run_parallel.Rd |only tests/testthat/test_MCIS_system.R | 903 +++++++++++++++--- tests/testthat/test_MC_IS_single.R |only tests/testthat/test_Methods_lnorm_x0.R | 24 tests/testthat/test_parallel.R |only vignettes/TesiproV-Vignette.Rmd | 130 ++ 32 files changed, 3237 insertions(+), 850 deletions(-)
More information about OdysseusCharacterizationModule at CRAN
Permanent link
Title: Creates a Scientific Project Skeleton as an R Package
Description: Provides a template for new research projects structured as an R
package-based research compendium. Everything - data, R scripts, custom
functions and manuscript or reports - is contained within the same package to
facilitate collaboration and promote reproducible research, following the FAIR
principles.
Author: Saskia Otto [aut, cre, cph]
Maintainer: Saskia Otto <saskia.a.otto@gmail.com>
Diff between SCIproj versions 1.0.0 dated 2026-03-18 and 1.0.1 dated 2026-04-22
DESCRIPTION | 8 +- MD5 | 20 +++--- NEWS.md | 37 ++++++++++++ R/create_proj.R | 91 ++++++++++++++++++++++--------- README.md | 32 ++++++++--- inst/WORDLIST | 3 + inst/doc/SCIproj.Rmd | 15 +++-- inst/doc/SCIproj.html | 34 ++++++++++- man/create_proj.Rd | 26 +++++++-- tests/testthat/test-create_proj.R | 109 +++++++++++++++++++++++++++++++++++++- vignettes/SCIproj.Rmd | 15 +++-- 11 files changed, 322 insertions(+), 68 deletions(-)
Title: Native Desktop App Framework for 'R'
Description: Build native Windows desktop applications using 'R' and
'WebView2'. Provides a robust 'R6'-based event loop, asynchronous
background task management via 'mirai' and 'callr', and a native
'Win32' message bridge for seamless 'R'-to-user-interface
communication without listening ports or network overhead. Allows 'R'
developers to create professional, standalone desktop tools with modern
web-based user interfaces while maintaining a pure 'R' backend.
Author: Janakiraman G [aut, cre] ,
Serge Zaitsev [cph] ),
Niels Lohmann [cph] ),
Microsoft Corporation [cph] )
Maintainer: Janakiraman G <janakiraman.bt@gmail.com>
Diff between RDesk versions 1.0.4 dated 2026-03-31 and 1.0.5 dated 2026-04-22
DESCRIPTION | 6 - MD5 | 29 +++-- NEWS.md | 42 +++++++ R/build.R | 189 ++++++++++++++++++++++++++--------- README.md | 10 + build/vignette.rds |binary inst/doc/ai_skill.Rmd |only inst/doc/ai_skill.html |only inst/doc/architecture.html | 2 inst/doc/cookbook.html | 4 inst/doc/getting-started.Rmd | 199 ++++++++++++++++++------------------- inst/doc/getting-started.html | 4 man/build_app.Rd | 18 ++- man/rdesk_copy_r_runtime.Rd |only man/rdesk_detect_r_home.Rd |only man/rdesk_validate_build_inputs.Rd | 3 vignettes/ai_skill.Rmd |only vignettes/getting-started.Rmd | 199 ++++++++++++++++++------------------- 18 files changed, 435 insertions(+), 270 deletions(-)
Title: Geospatial Regression Equation for European Nutrient Losses
(GREEN)
Description: Tools and methods to apply the model Geospatial Regression Equation
for European Nutrient losses (GREEN);
Grizzetti et al. (2005) <doi:10.1016/j.jhydrol.2004.07.036>;
Grizzetti et al. (2008);
Grizzetti et al. (2012) <doi:10.1111/j.1365-2486.2011.02576.x>;
Grizzetti et al. (2021) <doi:10.1016/j.gloenvcha.2021.102281>.
Author: A. Udias [aut],
B. Grizzetti [aut],
O. Vigiak [aut],
J. Gomez [aut],
C. Alfaro [aut, cre],
A. Aloe [aut]
Maintainer: C. Alfaro <c.alfarog@gmail.com>
Diff between GREENeR versions 1.0.1 dated 2026-02-11 and 1.0.2 dated 2026-04-22
DESCRIPTION | 12 +- MD5 | 18 +-- NAMESPACE | 2 NEWS.md | 6 + R/rgreen.R | 53 +++++---- R/rgreen_plots.R | 8 - build/partial.rdb |binary build/vignette.rds |binary inst/doc/GREENeR.R | 280 +++++++++++++++++++++++++------------------------- inst/doc/GREENeR.html | 106 +++++------------- 10 files changed, 229 insertions(+), 256 deletions(-)
Title: Simplified Legend and Guide Alignment for 'ggplot2'
Description: Provides one-liner functions for common legend and guide operations
in 'ggplot2'. Simplifies legend positioning, styling, wrapping, and
collection across multi-panel plots created with 'patchwork' or 'cowplot'.
Author: Gilles Colling [aut, cre]
Maintainer: Gilles Colling <gilles.colling051@gmail.com>
Diff between ggguides versions 1.1.4 dated 2026-01-09 and 1.1.5 dated 2026-04-22
DESCRIPTION | 6 +- MD5 | 43 +++++++-------- NEWS.md | 21 +++++++ R/legend_style.R | 33 +++++++++++ README.md | 115 +++++++++++++++++++++++++++++++++++++---- inst/doc/getting-started.Rmd | 5 + inst/doc/getting-started.html | 32 +++++------ inst/doc/multiple-legends.R | 28 +++++++++ inst/doc/multiple-legends.Rmd | 48 +++++++++++++++++ inst/doc/multiple-legends.html | 105 +++++++++++++++++++++++++++---------- inst/doc/patchwork.Rmd | 3 + inst/doc/patchwork.html | 24 ++++---- inst/doc/positioning.Rmd | 1 inst/doc/positioning.html | 22 +++---- inst/doc/styling.Rmd | 6 ++ inst/doc/styling.html | 48 ++++++++--------- man/legend_style.Rd | 18 ++++++ tests/testthat/Rplots.pdf |only vignettes/getting-started.Rmd | 5 + vignettes/multiple-legends.Rmd | 48 +++++++++++++++++ vignettes/patchwork.Rmd | 3 + vignettes/positioning.Rmd | 1 vignettes/styling.Rmd | 6 ++ 23 files changed, 493 insertions(+), 128 deletions(-)
Title: Additional Univariate and Multivariate Distributions
Description: Density, distribution function, quantile function
and random generation for a number of univariate
and multivariate distributions. This package implements the
following distributions: Bernoulli, beta-binomial, beta-negative
binomial, beta prime, Bhattacharjee, Birnbaum-Saunders,
bivariate normal, bivariate Poisson, categorical, Dirichlet,
Dirichlet-multinomial, discrete gamma, discrete Laplace,
discrete normal, discrete uniform, discrete Weibull, Frechet,
gamma-Poisson, generalized extreme value, Gompertz,
generalized Pareto, Gumbel, half-Cauchy, half-normal, half-t,
Huber density, inverse chi-squared, inverse-gamma, Kumaraswamy,
Laplace, location-scale t, logarithmic, Lomax, multivariate
hypergeometric, multinomial, negative hypergeometric,
non-standard beta, normal mixture, Poisson mixture, Pareto,
power, reparametrized beta, Rayleigh, shifted Gompertz, Skellam,
slash, triangular, truncated binomial, truncated normal,
truncated Poisson, Tukey lambda, Wald, zero-inflated binomial,
zer [...truncated...]
Author: Tymoteusz Wolodzko [aut],
Sigbert Klinke [cre],
Thomas Farrar [ctb]
Maintainer: Sigbert Klinke <sigbert@wiwi.hu-berlin.de>
Diff between extraDistr versions 1.10.0.2 dated 2026-01-18 and 1.10.0.3 dated 2026-04-22
DESCRIPTION | 18 ++++++++++++------ MD5 | 10 +++++----- NEWS.md | 4 ++++ R/dirichlet-distribution.R | 7 +++---- man/Dirichlet.Rd | 7 +++---- man/extraDistr-package.Rd | 5 +++++ 6 files changed, 32 insertions(+), 19 deletions(-)
Title: Disaster Victim Identification
Description: Joint DNA-based disaster victim identification (DVI), as
described in Vigeland and Egeland (2021)
<doi:10.21203/rs.3.rs-296414/v1>. Identification is performed by
optimising the joint likelihood of all victim samples and reference
individuals. Individual identification probabilities, conditional on
all available information, are derived from the joint solution in the
form of posterior pairing probabilities. 'dvir' is part of the
'pedsuite' collection of packages for pedigree analysis.
Author: Magnus Dehli Vigeland [aut, cre] ,
Thore Egeland [aut]
Maintainer: Magnus Dehli Vigeland <m.d.vigeland@medisin.uio.no>
Diff between dvir versions 3.3.0 dated 2024-09-09 and 3.4.0 dated 2026-04-22
dvir-3.3.0/dvir/data/KETPch4.rda |only dvir-3.3.0/dvir/data/KETPex481.rda |only dvir-3.3.0/dvir/data/KETPex497.rda |only dvir-3.3.0/dvir/data/KETPex498.rda |only dvir-3.3.0/dvir/man/KETPch4.Rd |only dvir-3.3.0/dvir/man/KETPex481.Rd |only dvir-3.3.0/dvir/man/KETPex497.Rd |only dvir-3.3.0/dvir/man/KETPex498.Rd |only dvir-3.4.0/dvir/DESCRIPTION | 19 - dvir-3.4.0/dvir/MD5 | 104 +++---- dvir-3.4.0/dvir/NAMESPACE | 2 dvir-3.4.0/dvir/NEWS.md | 27 + dvir-3.4.0/dvir/R/addVictims.R |only dvir-3.4.0/dvir/R/amDrivenDVI.R | 185 +++++++++--- dvir-3.4.0/dvir/R/data.R | 55 +-- dvir-3.4.0/dvir/R/dviCompare.R | 6 dvir-3.4.0/dvir/R/dviData.R | 149 +++++++--- dvir-3.4.0/dvir/R/dviSim.R | 6 dvir-3.4.0/dvir/R/dviSolve.R | 249 ++++++++++++----- dvir-3.4.0/dvir/R/familias2dvir.R | 20 - dvir-3.4.0/dvir/R/findExcluded.R | 16 - dvir-3.4.0/dvir/R/findNonidentifiable.R | 64 ++-- dvir-3.4.0/dvir/R/findUndisputed.R | 35 +- dvir-3.4.0/dvir/R/formatSummary.R | 34 +- dvir-3.4.0/dvir/R/getDatabase.R |only dvir-3.4.0/dvir/R/jointDVI.R | 62 +++- dvir-3.4.0/dvir/R/pairwiseGLR.R | 4 dvir-3.4.0/dvir/R/pairwiseLR.R | 6 dvir-3.4.0/dvir/R/plotDVI.R | 42 +- dvir-3.4.0/dvir/R/sequentialDVI.R | 4 dvir-3.4.0/dvir/R/subsetDVI.R | 56 ++- dvir-3.4.0/dvir/R/utils.R | 29 + dvir-3.4.0/dvir/README.md | 132 ++++----- dvir-3.4.0/dvir/build/partial.rdb |binary dvir-3.4.0/dvir/data/KETPchap481.rda |only dvir-3.4.0/dvir/data/KETPchap484.rda |only dvir-3.4.0/dvir/data/KETPexer497.rda |only dvir-3.4.0/dvir/data/KETPexer498.rda |only dvir-3.4.0/dvir/man/KETPchap481.Rd |only dvir-3.4.0/dvir/man/KETPchap484.Rd |only dvir-3.4.0/dvir/man/KETPexer497.Rd |only dvir-3.4.0/dvir/man/KETPexer498.Rd |only dvir-3.4.0/dvir/man/addVictims.Rd |only dvir-3.4.0/dvir/man/amDrivenDVI.Rd | 2 dvir-3.4.0/dvir/man/dviSolve.Rd | 48 ++- dvir-3.4.0/dvir/man/example1.Rd | 1 dvir-3.4.0/dvir/man/example2.Rd | 3 dvir-3.4.0/dvir/man/familias2dvir.Rd | 2 dvir-3.4.0/dvir/man/figures/README-example-plot1-1.png |binary dvir-3.4.0/dvir/man/figures/README-example-plot2-1.png |binary dvir-3.4.0/dvir/man/figures/README-solution-1.png |binary dvir-3.4.0/dvir/man/findNonidentifiable.Rd | 13 dvir-3.4.0/dvir/man/findUndisputed.Rd | 3 dvir-3.4.0/dvir/man/fire.Rd | 4 dvir-3.4.0/dvir/man/getDatabase.Rd |only dvir-3.4.0/dvir/man/getFamily.Rd | 5 dvir-3.4.0/dvir/man/grave.Rd | 5 dvir-3.4.0/dvir/man/icmp.Rd | 7 dvir-3.4.0/dvir/man/jointDVI.Rd | 23 + dvir-3.4.0/dvir/man/pairwiseLR.Rd | 2 dvir-3.4.0/dvir/man/planecrash.Rd | 7 dvir-3.4.0/dvir/man/plotDVI.Rd | 7 dvir-3.4.0/dvir/man/subsetDVI.Rd | 24 + 63 files changed, 969 insertions(+), 493 deletions(-)
Title: Create Spreadsheet Publications Following Best Practice
Description: Generate spreadsheet publications that follow best practice
guidance from the UK government's Analysis Function, available at
<https://analysisfunction.civilservice.gov.uk/policy-store/releasing-statistics-in-spreadsheets/>,
with a focus on accessibility. See also the 'Python' package 'gptables'.
Author: Matt Dray [aut],
Tim Taylor [ctb],
Matt Kerlogue [ctb],
Crown Copyright [cph],
Olivia Box Power [cre, ctb],
Zachary Gleisner [ctb]
Maintainer: Olivia Box Power <Olivia.BoxPower@dhsc.gov.uk>
Diff between aftables versions 2.0.0 dated 2026-03-20 and 2.0.1 dated 2026-04-22
DESCRIPTION | 6 MD5 | 10 - NAMESPACE | 1 NEWS.md | 414 ++++++++++++++++++++++++------------------------- R/aftables-package.R | 1 inst/doc/aftables.html | 40 ++-- 6 files changed, 239 insertions(+), 233 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-10-31 0.4-02
2014-08-22 0.4-01
2014-07-14 0.3-06
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-09-08 0.3.2
2019-05-11 0.3.1
2018-06-01 0.3
2017-10-14 0.2
2017-04-23 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-08-12 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-06-17 2.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-07-16 4.3-3
2015-02-04 4.3-1
2014-01-11 4.2-7
2012-02-15 4.1-0
2010-10-16 4.0-4
2010-06-27 4.0-3
2010-05-25 4.0-0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-09-22 5.0.0
2020-08-17 4.0.0
2018-07-16 3.0.0
2017-11-15 2.0.3
2016-07-22 2.0.2
2016-05-20 2.0.1
2015-12-03 2.0.0
2014-11-30 1.1.0
2014-11-11 1.0.0
2014-03-24 0.3.3
2014-02-18 0.3.2
2013-04-23 0.3.1
2012-01-18 0.3
2012-01-02 0.2
2011-12-30 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-11-13 1.1.0
2015-12-10 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-08-20 0.1-7
2021-04-11 0.1-6
2017-08-17 0.1-5
2017-06-25 0.1-4
2015-07-08 0.1-3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2012-07-31 2.2
2012-05-22 2.1
2012-04-25 2.0
2012-03-27 1.2
2011-05-11 1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2013-08-23 0.2
2013-08-13 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2014-03-11 1.0-4
2013-09-23 1.0-3
2011-10-17 1.0-1
2011-02-17 1.0-0
2009-10-26 0.5-1
2008-06-26 0.4-4
2006-10-20 0.4-2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-02-28 0.5.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-08-28 1.1-6
2021-11-25 1.1-3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2015-07-02 1.1
2015-01-01 1.0
Title: Soil Health Assessment Models for Assessing Soil Conditions and
Suitability
Description: Soil health assessment builds information to improve decision in
soil management. It facilitates assessment of soil conditions for crop suitability [such as those given by FAO
<https://www.fao.org/land-water/databases-and-software/crop-information/en/>],
groundwater recharge, fertility, erosion, salinization [<doi:10.1002/ldr.4211>],
carbon sequestration, irrigation potential, and status of soil resources.
Author: Christian Thine Omuto [aut, cre]
Maintainer: Christian Thine Omuto <thineomuto@yahoo.com>
Diff between soilassessment versions 0.3.2 dated 2026-04-13 and 1.3.0 dated 2026-04-22
DESCRIPTION | 6 +- MD5 | 76 ++++++++++++++------------ NAMESPACE | 2 R/CECSuit.R | 121 +++++------------------------------------- R/ECSuit.R | 124 ++++++------------------------------------- R/ECharm_Info.R | 2 R/ESPSuit.R | 126 +++++++------------------------------------- R/PHSuit.R | 122 ++++++------------------------------------- R/PHharm_Info.R | 2 R/SOCSuit.R | 123 ++++++------------------------------------- R/appendTextureclass.R | 101 ++++++++++++----------------------- R/bulkdenSuit.R | 125 +++++--------------------------------------- R/calcSuit.R |only R/carbonateSuit.R | 127 +++++++------------------------------------- R/demSuit.R | 129 +++++++-------------------------------------- R/depthSuit.R | 123 ++++++------------------------------------- R/erosionSuit.R | 116 ++++------------------------------------- R/fertilitySuit.R | 119 ++++-------------------------------------- R/getSuit.R |only R/physicalSuit.R | 130 +++++++--------------------------------------- R/porositySuit.R | 121 ++++-------------------------------------- R/slopeSuit.R | 129 +++++++-------------------------------------- R/stoneSuit.R | 123 ++++++------------------------------------- R/surveyPoints.R | 31 +++------- man/ECSuit.Rd | 12 ---- man/ECharm_Info.Rd | 22 +++++++ man/PHharm_Info.Rd | 22 +++++++ man/SOCSuit.Rd | 8 +- man/appendTextureclass.Rd | 4 - man/calcSuit.Rd |only man/carbonateSuit.Rd | 6 -- man/depthSuit.Rd | 10 --- man/fertilitySuit.Rd | 5 + man/getSuit.Rd |only man/reclassifyMap.Rd | 10 +-- man/slopeSuit.Rd | 12 ++-- man/sloplenFUN.Rd | 2 man/stoneSuit.Rd | 2 man/suitability.Rd | 2 man/surveyPoints.Rd | 8 +- man/tempSuit.Rd | 2 41 files changed, 427 insertions(+), 1778 deletions(-)
More information about soilassessment at CRAN
Permanent link
Title: Execute and Control System Processes
Description: Tools to run system processes in the background. It can
check if a background process is running; wait on a background process
to finish; get the exit status of finished processes; kill background
processes. It can read the standard output and error of the processes,
using non-blocking connections. 'processx' can poll a process for
standard output or error, with a timeout. It can also poll several
processes at once.
Author: Gabor Csardi [aut, cre, cph] ,
Winston Chang [aut],
Posit Software, PBC [cph, fnd] ,
Ascent Digital Services [cph, fnd]
Maintainer: Gabor Csardi <csardi.gabor@gmail.com>
Diff between processx versions 3.8.7 dated 2026-04-01 and 3.9.0 dated 2026-04-22
DESCRIPTION | 10 MD5 | 138 ++++----- NAMESPACE | 5 NEWS.md | 57 +++ R/assertions.R | 13 R/connections.R | 48 +++ R/initialize.R | 58 +++- R/io.R | 49 +++ R/on-load.R | 10 R/pipeline.R |only R/print.R | 12 R/process.R | 189 ++++++++++--- R/run.R | 244 +++++++++++++--- R/standalone-errors.R | 54 ++- R/utils.R | 34 ++ README.md | 11 man/pipeline.Rd |only man/poll.Rd | 2 man/process.Rd | 175 ++++++++++-- man/process_initialize.Rd | 3 man/processx-package.Rd | 2 man/processx_connections.Rd | 30 +- man/run.Rd | 31 +- src/create-time.c | 51 +++ src/init.c | 76 +++++ src/processx-connection.c | 143 ++++++++- src/processx-connection.h | 6 src/processx.h | 7 src/tools/px.c | 56 +++ src/unix/processx-unix.h | 2 src/unix/processx.c | 76 ++++- src/unix/utils.c | 17 + src/win/named_pipe.c | 3 src/win/processx-win.h | 6 src/win/processx.c | 376 +++++++++++++++++++++++++- src/win/stdio.c | 39 ++ src/win/utils.c | 18 + tests/testthat/_snaps/Darwin/process.md | 12 tests/testthat/_snaps/Darwin/run.md | 6 tests/testthat/_snaps/Darwin/unix-sockets.md | 22 - tests/testthat/_snaps/Linux/process.md | 12 tests/testthat/_snaps/Linux/run.md | 6 tests/testthat/_snaps/Linux/unix-sockets.md | 22 - tests/testthat/_snaps/Windows/process.md | 12 tests/testthat/_snaps/Windows/run.md | 6 tests/testthat/_snaps/Windows/unix-sockets.md | 6 tests/testthat/_snaps/err-output.md | 26 - tests/testthat/_snaps/errors.md | 6 tests/testthat/_snaps/fifo.md | 4 tests/testthat/_snaps/io.md | 22 - tests/testthat/_snaps/newcli/err-output.md | 8 tests/testthat/_snaps/process.md | 2 tests/testthat/_snaps/pty.md | 2 tests/testthat/_snaps/run.md |only tests/testthat/_snaps/standalone-errors.md | 8 tests/testthat/_snaps/unix-sockets.md | 24 - tests/testthat/_snaps/utils.md | 6 tests/testthat/helper.R | 29 ++ tests/testthat/test-env.R | 8 tests/testthat/test-fifo.R | 1 tests/testthat/test-io.R | 62 ++++ tests/testthat/test-kill-tree.R | 24 - tests/testthat/test-pipeline.R |only tests/testthat/test-poll-curl.R | 4 tests/testthat/test-print.R | 19 + tests/testthat/test-process.R | 140 +++++++++ tests/testthat/test-pty.R | 72 ++++ tests/testthat/test-run.R | 164 +++++++++++ tests/testthat/test-standalone-errors.R | 4 tests/testthat/test-unix-sockets.R | 34 +- tests/testthat/test-utils.R | 18 + tools/valgrind.supp | 20 - 72 files changed, 2446 insertions(+), 416 deletions(-)
Title: Explore the R Package Dependencies on the Comprehensive R
Archive Network (CRAN) Like Repositories
Description: Explore various dependencies of a packages (on the Comprehensive R Archive Network Like repositories). The functions get_neighborhood() and get_dependencies() provide dependencies of packages and as_graph() can be used to convert into a 'igraph' object for further analysis and plotting.
Author: Komala Sheshachala Srikanth [aut, cre],
Singh Nikhil [aut]
Maintainer: Komala Sheshachala Srikanth <sri.teach@gmail.com>
Diff between pkggraph versions 0.3.0 dated 2026-02-23 and 0.3.1 dated 2026-04-22
DESCRIPTION | 6 ++-- MD5 | 20 +++++++-------- NAMESPACE | 2 - NEWS.md | 4 +++ R/core.R | 5 ++- R/init.R | 41 ++++++++++++++++++------------- R/pkggraph-package.R | 2 - README.md | 14 +++++----- man/figures/README-unnamed-chunk-2-1.png |binary man/init.Rd | 10 +++---- man/pkggraph-package.Rd | 2 - 11 files changed, 57 insertions(+), 49 deletions(-)
Title: An Object Oriented System Meant to Become a Successor to S3 and
S4
Description: A new object oriented programming system designed to be a
successor to S3 and S4. It includes formal class, generic, and method
specification, and a limited form of multiple dispatch. It has been
designed and implemented collaboratively by the R Consortium
Object-Oriented Programming Working Group, which includes
representatives from R-Core, 'Bioconductor', 'Posit'/'tidyverse', and
the wider R community.
Author: Object-Oriented Programming Working Group [cph],
Davis Vaughan [aut],
Jim Hester [aut] ,
Tomasz Kalinowski [aut],
Will Landau [aut],
Michael Lawrence [aut],
Martin Maechler [aut] ,
Luke Tierney [aut],
Hadley Wickham [aut, cre]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between S7 versions 0.2.1-1 dated 2026-04-15 and 0.2.2 dated 2026-04-22
DESCRIPTION | 6 +- MD5 |only NEWS.md | 4 + build/vignette.rds |binary inst/doc/S7.html | 7 +-- inst/doc/classes-objects.html | 5 +- inst/doc/compatibility.html | 5 +- inst/doc/generics-methods.html | 5 +- inst/doc/motivation.html | 5 +- inst/doc/packages.html | 5 +- inst/doc/performance.html | 95 ++++++++++++++++++++--------------------- src/compat.h |only src/init.c | 6 -- src/method-dispatch.c | 10 +--- src/prop.c | 23 ++++++--- 15 files changed, 93 insertions(+), 83 deletions(-)
Title: Interactive 3D Brain Atlas Visualization
Description: Plot brain atlases as interactive 3D meshes using 'Three.js'
via 'htmlwidgets', or render publication-quality static images through
'rgl' and 'rayshader'. A pipe-friendly API lets you map data onto
brain regions, control camera angles, toggle region edges, overlay
glass brains, and snapshot or ray-trace the result. Additional
atlases are available through the 'ggsegverse' r-universe. Mowinckel
& Vidal-Piñeiro (2020) <doi:10.1177/2515245920928009>.
Author: Athanasia Mo Mowinckel [aut, cre] ,
Didac Vidal-Pineiro [aut] ,
Center for Lifespan Changes in Brain and Cognition , University
of Oslo [cph],
three.js authors [ctb, cph]
Maintainer: Athanasia Mo Mowinckel <a.m.mowinckel@psykologi.uio.no>
Diff between ggseg3d versions 2.1.0 dated 2026-04-09 and 2.1.1 dated 2026-04-22
ggseg3d-2.1.0/ggseg3d/man/position_hemisphere.Rd |only ggseg3d-2.1.1/ggseg3d/DESCRIPTION | 18 +- ggseg3d-2.1.1/ggseg3d/LICENSE.note |only ggseg3d-2.1.1/ggseg3d/MD5 | 61 ++++----- ggseg3d-2.1.1/ggseg3d/NEWS.md | 35 +++++ ggseg3d-2.1.1/ggseg3d/R/additions.R | 98 ++++++++------- ggseg3d-2.1.1/ggseg3d/R/brain-mesh.R | 110 ++++++----------- ggseg3d-2.1.1/ggseg3d/R/ggseg3d.R | 26 ---- ggseg3d-2.1.1/ggseg3d/R/rayshader.R | 3 ggseg3d-2.1.1/ggseg3d/R/widget-output.R | 6 ggseg3d-2.1.1/ggseg3d/inst/WORDLIST | 9 + ggseg3d-2.1.1/ggseg3d/man/add_glassbrain.Rd | 12 + ggseg3d-2.1.1/ggseg3d/man/build_centerline_data.Rd | 4 ggseg3d-2.1.1/ggseg3d/man/ggseg3d-package.Rd | 1 ggseg3d-2.1.1/ggseg3d/man/ggseg3d-shiny.Rd | 2 ggseg3d-2.1.1/ggseg3d/man/ggseg3d.Rd | 2 ggseg3d-2.1.1/ggseg3d/man/ggsegray.Rd | 1 ggseg3d-2.1.1/ggseg3d/man/pan_camera.Rd | 4 ggseg3d-2.1.1/ggseg3d/man/resolve_brain_mesh.Rd | 11 - ggseg3d-2.1.1/ggseg3d/man/set_background.Rd | 4 ggseg3d-2.1.1/ggseg3d/man/set_dimensions.Rd | 2 ggseg3d-2.1.1/ggseg3d/man/set_edges.Rd | 4 ggseg3d-2.1.1/ggseg3d/man/set_flat_shading.Rd | 2 ggseg3d-2.1.1/ggseg3d/man/set_legend.Rd | 3 ggseg3d-2.1.1/ggseg3d/man/set_orthographic.Rd | 2 ggseg3d-2.1.1/ggseg3d/man/set_positioning.Rd | 30 ++-- ggseg3d-2.1.1/ggseg3d/man/updateGgseg3dBackground.Rd | 2 ggseg3d-2.1.1/ggseg3d/man/updateGgseg3dCamera.Rd | 2 ggseg3d-2.1.1/ggseg3d/tests/testthat/_snaps |only ggseg3d-2.1.1/ggseg3d/tests/testthat/helper-visual.R |only ggseg3d-2.1.1/ggseg3d/tests/testthat/test-additions.R | 31 +++- ggseg3d-2.1.1/ggseg3d/tests/testthat/test-brain-mesh.R | 66 +++++----- ggseg3d-2.1.1/ggseg3d/tests/testthat/test-ggseg3d.R | 27 ++++ ggseg3d-2.1.1/ggseg3d/tests/testthat/test-visual.R |only 34 files changed, 328 insertions(+), 250 deletions(-)
Title: Tests for Variance Homogeneity
Description: Performs 18 omnibus tests yielding a total of 28 distinct methodological variations for testing the composite hypothesis of variance homogeneity.
Author: Gozde Cosar [aut],
Muhammed Ali Yilmaz [aut],
Merve Kasikci [aut],
Osman Dag [aut, cre]
Maintainer: Osman Dag <osman.dag@outlook.com>
Diff between vartest versions 1.4 dated 2026-04-07 and 1.5 dated 2026-04-22
vartest-1.4/vartest/R/adjusted.taha.test.R |only vartest-1.4/vartest/R/taha.test.R |only vartest-1.4/vartest/man/adjusted.taha.test.Rd |only vartest-1.4/vartest/man/taha.test.Rd |only vartest-1.5/vartest/DESCRIPTION | 12 +++---- vartest-1.5/vartest/MD5 | 34 +++++++++----------- vartest-1.5/vartest/NAMESPACE | 6 ++- vartest-1.5/vartest/R/select_vartest.R |only vartest-1.5/vartest/man/ansari.test.Rd | 2 - vartest-1.5/vartest/man/capon.test.Rd | 2 - vartest-1.5/vartest/man/david.barton.test.Rd | 6 +-- vartest-1.5/vartest/man/duran.test.Rd | 3 + vartest-1.5/vartest/man/fk.test.Rd | 6 +-- vartest-1.5/vartest/man/klotz.test.Rd | 2 - vartest-1.5/vartest/man/mood.test.Rd | 2 - vartest-1.5/vartest/man/print.summary.vht.Rd | 2 - vartest-1.5/vartest/man/select_vartest.Rd |only vartest-1.5/vartest/man/siegel.tukey.test.Rd | 4 +- vartest-1.5/vartest/man/summary.vht.Rd | 2 - vartest-1.5/vartest/man/talwar.gentle.test.Rd | 2 - vartest-1.5/vartest/tests/testthat/testthat-vht.R | 37 +++++----------------- 21 files changed, 53 insertions(+), 69 deletions(-)
Title: A Wrapper for the 'Highcharts' Library
Description: A wrapper for the 'Highcharts' library including
shortcut functions to plot R objects. 'Highcharts'
<https://www.highcharts.com/> is a charting library offering
numerous chart types with a simple configuration syntax.
Author: Joshua Kunst [aut, cre],
Nuno Agostinho [ctb] ,
Danton Noriega [ctb] ,
Martin John Hadley [ctb] ,
Eduardo Flores [ctb] ,
Dean Kilfoyle [ctb] ,
Adline Dsilva [ctb] ,
Kamil Slowikowski [ctb] ,
Christian Minich [ctb] ,
Jonathan Armond [ctb] ,
David Breu [...truncated...]
Maintainer: Joshua Kunst <jbkunst@gmail.com>
Diff between highcharter versions 0.9.4 dated 2022-01-03 and 0.9.5 dated 2026-04-22
highcharter-0.9.4/highcharter/man/highcharter.Rd |only highcharter-0.9.5/highcharter/DESCRIPTION | 11 highcharter-0.9.5/highcharter/MD5 | 383 - highcharter-0.9.5/highcharter/NAMESPACE | 562 +- highcharter-0.9.5/highcharter/NEWS.md | 576 +- highcharter-0.9.5/highcharter/R/data-helpers.R | 488 +- highcharter-0.9.5/highcharter/R/data.R | 494 +- highcharter-0.9.5/highcharter/R/export_hc.R | 156 highcharter-0.9.5/highcharter/R/globals.R | 26 highcharter-0.9.5/highcharter/R/hchart-shorcuts.R | 952 ++-- highcharter-0.9.5/highcharter/R/hchart.R | 79 highcharter-0.9.5/highcharter/R/helpers.R | 820 +-- highcharter-0.9.5/highcharter/R/highcharter-package.R | 86 highcharter-0.9.5/highcharter/R/highcharter.R | 528 +- highcharter-0.9.5/highcharter/R/highcharts-api-add.R | 1558 +++--- highcharter-0.9.5/highcharter/R/highcharts-api-helpers.R | 1048 ++-- highcharter-0.9.5/highcharter/R/highcharts-api.R | 2260 +++++----- highcharter-0.9.5/highcharter/R/highmaps.R | 448 + highcharter-0.9.5/highcharter/R/icons.R | 78 highcharter-0.9.5/highcharter/R/proxy.R | 646 +- highcharter-0.9.5/highcharter/R/theme-alone.R | 188 highcharter-0.9.5/highcharter/R/theme-bloom.R | 278 - highcharter-0.9.5/highcharter/R/theme-elementary.R | 128 highcharter-0.9.5/highcharter/R/theme-ffx.R | 2 highcharter-0.9.5/highcharter/R/theme-flatdark.R | 130 highcharter-0.9.5/highcharter/R/theme-ggplot2.R | 132 highcharter-0.9.5/highcharter/R/theme-hcrt.R | 224 highcharter-0.9.5/highcharter/R/theme-smpl.R | 2 highcharter-0.9.5/highcharter/R/theme-superheroes.R | 150 highcharter-0.9.5/highcharter/R/theme-tufte.R | 162 highcharter-0.9.5/highcharter/README.md | 104 highcharter-0.9.5/highcharter/inst/WORDLIST | 392 - highcharter-0.9.5/highcharter/inst/htmlwidgets/highchart.yaml | 194 highcharter-0.9.5/highcharter/inst/htmlwidgets/highchartzero.js | 68 highcharter-0.9.5/highcharter/inst/htmlwidgets/highchartzero.yaml | 22 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/css/htmlwdgtgrid.css | 558 +- highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/css/motion.css | 96 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/custom/appear.js | 140 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/custom/delay-animation.js | 270 - highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/custom/reset.js | 24 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/custom/symbols-extra.js | 92 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/custom/text-symbols.js | 80 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/custom/tooltip-delay.js | 94 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/modules/map.js | 304 - highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/plugins/draggable-legend.js | 192 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/plugins/grouped-categories.js | 1252 ++--- highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/plugins/highcharts-regression.js | 1334 ++--- highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/plugins/motion.js | 512 +- highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/highcharts/plugins/multicolor_series.js | 1314 ++--- highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/jquery/jquery.min.js | 4 highcharter-0.9.5/highcharter/inst/htmlwidgets/lib/proj4js/proj4.js | 4 highcharter-0.9.5/highcharter/man/citytemp.Rd | 60 highcharter-0.9.5/highcharter/man/citytemp_long.Rd | 54 highcharter-0.9.5/highcharter/man/color_classes.Rd | 40 highcharter-0.9.5/highcharter/man/color_stops.Rd | 40 highcharter-0.9.5/highcharter/man/colorize.Rd | 44 highcharter-0.9.5/highcharter/man/data_to_boxplot.Rd | 104 highcharter-0.9.5/highcharter/man/data_to_hierarchical.Rd | 88 highcharter-0.9.5/highcharter/man/data_to_sankey.Rd | 54 highcharter-0.9.5/highcharter/man/datetime_to_timestamp.Rd | 50 highcharter-0.9.5/highcharter/man/df_to_annotations_labels.Rd | 48 highcharter-0.9.5/highcharter/man/download_map_data.Rd | 70 highcharter-0.9.5/highcharter/man/export_hc.Rd | 96 highcharter-0.9.5/highcharter/man/favorite_bars.Rd | 54 highcharter-0.9.5/highcharter/man/favorite_pies.Rd | 54 highcharter-0.9.5/highcharter/man/figures/circle.svg | 478 +- highcharter-0.9.5/highcharter/man/figures/hexicon.svg | 502 +- highcharter-0.9.5/highcharter/man/figures/square.svg | 480 +- highcharter-0.9.5/highcharter/man/get_data_from_map.Rd | 48 highcharter-0.9.5/highcharter/man/get_hc_series_from_df.Rd | 46 highcharter-0.9.5/highcharter/man/globaltemp.Rd | 62 highcharter-0.9.5/highcharter/man/hc_add_annotation.Rd | 50 highcharter-0.9.5/highcharter/man/hc_add_dependency.Rd | 68 highcharter-0.9.5/highcharter/man/hc_add_dependency_fa.Rd | 44 highcharter-0.9.5/highcharter/man/hc_add_event_point.Rd | 62 highcharter-0.9.5/highcharter/man/hc_add_series.Rd | 48 highcharter-0.9.5/highcharter/man/hc_add_series.character.Rd | 42 highcharter-0.9.5/highcharter/man/hc_add_series.data.frame.Rd | 50 highcharter-0.9.5/highcharter/man/hc_add_series.density.Rd | 36 highcharter-0.9.5/highcharter/man/hc_add_series.forecast.Rd | 70 highcharter-0.9.5/highcharter/man/hc_add_series.geo_json.Rd | 46 highcharter-0.9.5/highcharter/man/hc_add_series.lm.Rd | 84 highcharter-0.9.5/highcharter/man/hc_add_series.numeric.Rd | 36 highcharter-0.9.5/highcharter/man/hc_add_series.ts.Rd | 36 highcharter-0.9.5/highcharter/man/hc_add_series.xts.Rd | 46 highcharter-0.9.5/highcharter/man/hc_add_series_list.Rd | 52 highcharter-0.9.5/highcharter/man/hc_add_series_map.Rd | 134 highcharter-0.9.5/highcharter/man/hc_add_theme.Rd | 56 highcharter-0.9.5/highcharter/man/hc_add_yAxis.Rd | 164 highcharter-0.9.5/highcharter/man/hc_annotations.Rd | 140 highcharter-0.9.5/highcharter/man/hc_boost.Rd | 256 - highcharter-0.9.5/highcharter/man/hc_caption.Rd | 80 highcharter-0.9.5/highcharter/man/hc_chart.Rd | 92 highcharter-0.9.5/highcharter/man/hc_colorAxis.Rd | 188 highcharter-0.9.5/highcharter/man/hc_colors.Rd | 60 highcharter-0.9.5/highcharter/man/hc_credits.Rd | 56 highcharter-0.9.5/highcharter/man/hc_drilldown.Rd | 168 highcharter-0.9.5/highcharter/man/hc_elementId.Rd | 42 highcharter-0.9.5/highcharter/man/hc_exporting.Rd | 54 highcharter-0.9.5/highcharter/man/hc_labels.Rd | 68 highcharter-0.9.5/highcharter/man/hc_legend.Rd | 80 highcharter-0.9.5/highcharter/man/hc_loading.Rd | 60 highcharter-0.9.5/highcharter/man/hc_mapNavigation.Rd | 50 highcharter-0.9.5/highcharter/man/hc_motion.Rd | 42 highcharter-0.9.5/highcharter/man/hc_navigator.Rd | 76 highcharter-0.9.5/highcharter/man/hc_pane.Rd | 184 highcharter-0.9.5/highcharter/man/hc_plotOptions.Rd | 80 highcharter-0.9.5/highcharter/man/hc_rangeSelector.Rd | 70 highcharter-0.9.5/highcharter/man/hc_responsive.Rd | 82 highcharter-0.9.5/highcharter/man/hc_rm_series.Rd | 32 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highcharter-0.9.5/highcharter/man/hc_theme_ggplot2.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_google.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_gridlight.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_handdrawn.Rd | 40 highcharter-0.9.5/highcharter/man/hc_theme_hcrt.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_merge.Rd | 64 highcharter-0.9.5/highcharter/man/hc_theme_monokai.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_null.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_sandsignika.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_smpl.Rd | 40 highcharter-0.9.5/highcharter/man/hc_theme_sparkline.Rd | 40 highcharter-0.9.5/highcharter/man/hc_theme_superheroes.Rd | 38 highcharter-0.9.5/highcharter/man/hc_theme_tufte.Rd | 56 highcharter-0.9.5/highcharter/man/hc_title.Rd | 60 highcharter-0.9.5/highcharter/man/hc_tooltip.Rd | 70 highcharter-0.9.5/highcharter/man/hc_xAxis.Rd | 92 highcharter-0.9.5/highcharter/man/hc_yAxis.Rd | 92 highcharter-0.9.5/highcharter/man/hc_zAxis.Rd | 110 highcharter-0.9.5/highcharter/man/hcaes.Rd | 44 highcharter-0.9.5/highcharter/man/hcaes_string.Rd | 52 highcharter-0.9.5/highcharter/man/hcboxplot.Rd | 54 highcharter-0.9.5/highcharter/man/hchart.Rd | 44 highcharter-0.9.5/highcharter/man/hchart.igraph.Rd |only highcharter-0.9.5/highcharter/man/hchart.survfit.Rd | 122 highcharter-0.9.5/highcharter/man/hciconarray.Rd | 48 highcharter-0.9.5/highcharter/man/hcmap.Rd | 122 highcharter-0.9.5/highcharter/man/hcparcords.Rd | 66 highcharter-0.9.5/highcharter/man/hcpxy_add_point.Rd | 78 highcharter-0.9.5/highcharter/man/hcpxy_add_series.Rd | 36 highcharter-0.9.5/highcharter/man/hcpxy_loading.Rd | 34 highcharter-0.9.5/highcharter/man/hcpxy_redraw.Rd | 28 highcharter-0.9.5/highcharter/man/hcpxy_remove_point.Rd | 48 highcharter-0.9.5/highcharter/man/hcpxy_remove_series.Rd | 38 highcharter-0.9.5/highcharter/man/hcpxy_set_data.Rd | 76 highcharter-0.9.5/highcharter/man/hcpxy_update.Rd | 32 highcharter-0.9.5/highcharter/man/hcpxy_update_point.Rd | 44 highcharter-0.9.5/highcharter/man/hcpxy_update_series.Rd | 40 highcharter-0.9.5/highcharter/man/hcspark.Rd | 56 highcharter-0.9.5/highcharter/man/hctreemap.Rd | 84 highcharter-0.9.5/highcharter/man/hctreemap2.Rd | 124 highcharter-0.9.5/highcharter/man/hex_to_rgba.Rd | 40 highcharter-0.9.5/highcharter/man/highchart.Rd | 84 highcharter-0.9.5/highcharter/man/highchart2.Rd | 106 highcharter-0.9.5/highcharter/man/highchartOutput.Rd | 48 highcharter-0.9.5/highcharter/man/highchartProxy.Rd | 36 highcharter-0.9.5/highcharter/man/highcharter-exports.Rd | 26 highcharter-0.9.5/highcharter/man/highcharter-package.Rd |only highcharter-0.9.5/highcharter/man/highcharts_demo.Rd | 30 highcharter-0.9.5/highcharter/man/hw_grid.Rd | 86 highcharter-0.9.5/highcharter/man/is.hexcolor.Rd | 40 highcharter-0.9.5/highcharter/man/is.highchart.Rd | 28 highcharter-0.9.5/highcharter/man/list_parse.Rd | 48 highcharter-0.9.5/highcharter/man/mountains_panorama.Rd | 58 highcharter-0.9.5/highcharter/man/mutate_mapping.Rd | 50 highcharter-0.9.5/highcharter/man/pokemon.Rd | 32 highcharter-0.9.5/highcharter/man/random_id.Rd | 32 highcharter-0.9.5/highcharter/man/renderHighchart.Rd | 48 highcharter-0.9.5/highcharter/man/stars.Rd | 60 highcharter-0.9.5/highcharter/man/str_to_id.Rd | 42 highcharter-0.9.5/highcharter/man/tooltip_chart.Rd | 194 highcharter-0.9.5/highcharter/man/tooltip_table.Rd | 68 highcharter-0.9.5/highcharter/man/unemployment.Rd | 56 highcharter-0.9.5/highcharter/man/uscountygeojson.Rd | 34 highcharter-0.9.5/highcharter/man/usgeojson.Rd | 34 highcharter-0.9.5/highcharter/man/vaccines.Rd | 58 highcharter-0.9.5/highcharter/man/weather.Rd | 56 highcharter-0.9.5/highcharter/man/worldgeojson.Rd | 34 194 files changed, 14895 insertions(+), 14846 deletions(-)
Title: Create Elegant Data Visualisations Using the Grammar of Graphics
Description: A system for 'declaratively' creating graphics, based on "The
Grammar of Graphics". You provide the data, tell 'ggplot2' how to map
variables to aesthetics, what graphical primitives to use, and it
takes care of the details.
Author: Hadley Wickham [aut] ,
Winston Chang [aut] ,
Lionel Henry [aut],
Thomas Lin Pedersen [aut, cre] ,
Kohske Takahashi [aut],
Claus Wilke [aut] ,
Kara Woo [aut] ,
Hiroaki Yutani [aut] ,
Dewey Dunnington [aut] ,
Teun van den Brand [aut] ,
Posit, PBC [cph, [...truncated...]
Maintainer: Thomas Lin Pedersen <thomas.pedersen@posit.co>
Diff between ggplot2 versions 4.0.2 dated 2026-02-03 and 4.0.3 dated 2026-04-22
DESCRIPTION | 6 +- MD5 | 40 +++++++-------- NEWS.md | 96 ++++++++++++++++++++----------------- R/facet-.R | 8 +-- R/geom-path.R | 4 - R/guide-.R | 2 R/guide-axis-theta.R | 6 +- R/guide-bins.R | 2 R/position-dodge.R | 4 - R/stat-boxplot.R | 7 +- R/stat-sum.R | 2 R/stat-ydensity.R | 4 - R/utilities.R | 13 ++++- inst/doc/extending-ggplot2.html | 49 +++++++++--------- inst/doc/ggplot2-in-packages.html | 3 - inst/doc/ggplot2-specs.html | 31 ++++++----- inst/doc/ggplot2.html | 19 +++---- inst/doc/profiling.html | 9 +-- man/geom_boxplot.Rd | 4 + tests/testthat/test-geom-boxplot.R | 29 +++++++++++ tests/testthat/test-plot.R | 2 21 files changed, 203 insertions(+), 137 deletions(-)
Title: A Modern and Flexible Web Client for R
Description: Bindings to 'libcurl' <https://curl.se/libcurl/> for performing fully
configurable HTTP/FTP requests where responses can be processed in memory, on
disk, or streaming via the callback or connection interfaces. Some knowledge
of 'libcurl' is recommended; for a more-user-friendly web client see the
'httr2' package which builds on this package with http specific tools and logic.
Author: Jeroen Ooms [aut, cre] ,
Hadley Wickham [ctb],
Posit Software, PBC [cph]
Maintainer: Jeroen Ooms <jeroenooms@gmail.com>
Diff between curl versions 7.0.0 dated 2025-08-19 and 7.1.0 dated 2026-04-22
DESCRIPTION | 6 - MD5 | 36 +++++------ NEWS | 6 + R/nslookup.R | 2 R/onload.R | 40 ++++++++++++ build/vignette.rds |binary inst/doc/intro.R | 2 inst/doc/intro.Rmd | 2 inst/doc/intro.html | 115 +++++++++++++++++++------------------ inst/doc/windows.html | 2 man/handle.Rd | 4 - man/handle_cookies.Rd | 2 man/nslookup.Rd | 2 src/download.c | 2 src/handle.c | 4 - src/ieproxy.c | 6 - tests/testthat/test-certificates.R | 2 tests/testthat/test-multi.R | 8 +- vignettes/intro.Rmd | 2 19 files changed, 147 insertions(+), 96 deletions(-)
Title: Univariate Time Series Forecasting
Description: An engine for univariate time series forecasting using
different regression models in an autoregressive way. The engine
provides an uniform interface for applying the different models.
Furthermore, it is extensible so that users can easily apply their
own regression models to univariate time series forecasting and
benefit from all the features of the engine, such as preprocessings
or estimation of forecast accuracy.
Author: Maria Pilar Frias-Bustamante [aut] ,
Francisco Martinez [aut, cre, cph]
Maintainer: Francisco Martinez <fmartin@ujaen.es>
Diff between utsf versions 1.3.2 dated 2026-04-14 and 1.3.3 dated 2026-04-22
DESCRIPTION | 11 MD5 | 18 - NEWS.md | 8 R/build_models.R | 6 R/main.R | 14 - inst/doc/utsf.R | 45 +--- inst/doc/utsf.Rmd | 84 ++----- inst/doc/utsf.html | 584 +++++++++++++++++++++++----------------------------- man/create_model.Rd | 6 vignettes/utsf.Rmd | 84 ++----- 10 files changed, 373 insertions(+), 487 deletions(-)
Title: Tools for Single Cell Genomics
Description: A toolkit for quality control, analysis, and exploration of single cell RNA sequencing data. 'Seurat' aims to enable users to identify and interpret sources of heterogeneity from single cell transcriptomic measurements, and to integrate diverse types of single cell data. See Satija R, Farrell J, Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>, and Hao, Hao, et al (2020) <doi:10.1101/2020.10.12.335331> for more details.
Author: Andrew Butler [ctb] ,
Saket Choudhary [ctb] ,
David Collins [ctb] ,
Charlotte Darby [ctb] ,
Jeff Farrell [ctb],
Isabella Grabski [ctb] ,
Christoph Hafemeister [ctb] ,
Yuhan Hao [ctb] ,
Austin Hartman [ctb] ,
Paul Hoffman [ctb] ,
Jaison Jain [ctb] ,
L [...truncated...]
Maintainer: Rahul Satija <seurat@nygenome.org>
Diff between Seurat versions 5.4.0 dated 2025-12-14 and 5.5.0 dated 2026-04-22
DESCRIPTION | 8 MD5 | 74 +- NAMESPACE | 6 NEWS.md | 40 + R/clustering.R | 26 R/convenience.R | 4 R/differential_expression.R | 188 +++-- R/dimensional_reduction.R | 8 R/integration.R | 2 R/integration5.R | 2 R/mixscape.R | 8 R/objects.R | 10 R/preprocessing.R | 129 +++ R/sketching.R | 2 R/utilities.R | 54 + R/visualization.R | 701 ++++++++++++-------- R/zzz.R | 3 README.md | 20 build/Seurat.pdf |binary build/stage23.rdb |binary man/DimHeatmap.Rd | 13 man/ElbowPlot.Rd | 25 man/FeaturePlot.Rd | 3 man/GetTissueCoordinates.Rd | 2 man/HarmonyIntegration.Rd | 2 man/Load10X_Spatial.Rd | 2 man/ScaleData.Rd | 3 man/Seurat-package.Rd | 3 man/SingleSpatialPlot.Rd | 9 man/SpatialPlot.Rd | 6 src/RModularityOptimizer.cpp | 8 tests/testthat/test_differential_expression.R | 800 ++++++++++++----------- tests/testthat/test_integratedata.R | 51 - tests/testthat/test_integration.R | 870 ++++++++++++-------------- tests/testthat/test_integration5.R | 346 +++++----- tests/testthat/test_preprocessing.R | 407 ++++++------ tests/testthat/test_transferdata.R | 159 ++-- tests/testthat/test_visualization.R | 30 38 files changed, 2255 insertions(+), 1769 deletions(-)
Title: Reporting Tables
Description: Reporting tables often have structure that goes beyond simple
rectangular data. The 'rtables' package provides a framework for
declaring complex multi-level tabulations and then applying them to
data. This framework models both tabulation and the resulting tables
as hierarchical, tree-like objects which support sibling sub-tables,
arbitrary splitting or grouping of data in row and column dimensions,
cells containing multiple values, and the concept of contextual
summary computations. A convenient pipe-able interface is provided for
declaring table layouts and the corresponding computations, and then
applying them to data.
Author: Gabriel Becker [aut] ,
Adrian Waddell [aut],
Daniel Sabanes Bove [ctb],
Maximilian Mordig [ctb],
Davide Garolini [aut] ,
Emily de la Rua [aut] ,
Abinaya Yogasekaram [ctb] ,
Joe Zhu [aut, cre] ,
F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Joe Zhu <joe.zhu@roche.com>
Diff between rtables versions 0.6.15 dated 2025-12-14 and 0.6.16 dated 2026-04-22
DESCRIPTION | 22 MD5 | 153 NAMESPACE | 668 +- NEWS.md | 1212 ++-- R/custom_split_funs.R | 1412 ++-- R/default_split_funs.R | 1414 ++-- R/make_split_fun.R | 961 +-- R/make_subset_expr.R | 629 +- R/tt_paginate.R | 2065 +++---- build/vignette.rds |binary inst/WORDLIST | 89 inst/doc/advanced_usage.R | 342 - inst/doc/advanced_usage.html | 1282 ++-- inst/doc/ard_how_to.R | 230 inst/doc/ard_how_to.html | 1792 +++--- inst/doc/baseline.R | 140 inst/doc/baseline.html | 964 +-- inst/doc/clinical_trials.R | 1424 ++-- inst/doc/clinical_trials.html | 4730 ++++++++-------- inst/doc/col_counts.R | 180 inst/doc/col_counts.html | 1174 ++-- inst/doc/custom_appearance.R | 626 +- inst/doc/custom_appearance.html | 2708 ++++----- inst/doc/example_analysis_coxreg.R | 604 +- inst/doc/example_analysis_coxreg.html | 1740 +++--- inst/doc/exploratory_analysis.R | 240 inst/doc/exploratory_analysis.html | 1578 ++--- inst/doc/format_precedence.R | 406 - inst/doc/format_precedence.html | 1636 ++--- inst/doc/guided_intermediate.R | 32 inst/doc/guided_intermediate.html | 3204 +++++------ inst/doc/guided_intermediate_afun_reqs.R | 408 - inst/doc/guided_intermediate_afun_reqs.html | 4502 +++++++-------- inst/doc/guided_intermediate_split_reqs.R | 372 - inst/doc/guided_intermediate_split_reqs.html | 4626 ++++++++-------- inst/doc/guided_intermediate_translating_shells.R | 976 +-- inst/doc/guided_intermediate_translating_shells.html | 5444 +++++++++---------- inst/doc/introspecting_tables.R | 152 inst/doc/introspecting_tables.html | 1348 ++-- inst/doc/manual_table_construction.R | 48 inst/doc/manual_table_construction.html | 932 +-- inst/doc/pathing.R | 362 - inst/doc/pathing.Rmd | 1034 +-- inst/doc/pathing.html | 2608 ++++----- inst/doc/rtables.R | 312 - inst/doc/rtables.html | 1614 ++--- inst/doc/sorting_pruning.R | 364 - inst/doc/sorting_pruning.html | 2662 ++++----- inst/doc/split_functions.R | 386 - inst/doc/split_functions.html | 1856 +++--- inst/doc/subsetting_tables.R | 226 inst/doc/subsetting_tables.html | 1602 ++--- inst/doc/tabulation_concepts.R | 564 - inst/doc/tabulation_concepts.html | 2344 ++++---- inst/doc/tabulation_dplyr.R | 292 - inst/doc/tabulation_dplyr.html | 1394 ++-- inst/doc/title_footer.R | 282 inst/doc/title_footer.html | 1838 +++--- man/add_combo_facet.Rd | 115 man/add_overall_level.Rd | 270 man/drop_facet_levels.Rd | 59 man/make_split_fun.Rd | 267 man/make_split_result.Rd | 164 man/make_subset_expr.Rd |only man/restrict_facets.Rd |only man/rtables-package.Rd | 80 man/trim_levels_in_facets.Rd | 55 tests/testthat/test-accessors.R | 1260 ++-- tests/testthat/test-custom_split_funs.R | 597 +- tests/testthat/test-exporters.R | 546 - tests/testthat/test-formatting.R | 426 - tests/testthat/test-header-footer.R | 334 - tests/testthat/test-indent-mod.R | 472 - tests/testthat/test-make-afun.R | 956 +-- tests/testthat/test-make-subset_expr.R |only tests/testthat/test-pagination.R | 1192 ++-- tests/testthat/test-regressions.R | 1246 ++-- tests/testthat/test-sort-prune.R | 724 +- vignettes/pathing.Rmd | 1034 +-- 79 files changed, 41226 insertions(+), 40776 deletions(-)
Title: Detection of Chromosomal Aneuploidies in Ancient DNA Studies
Description: An R implementation of ChASM (Chromosomal Aneuploidy Screening Methodology): a statistically rigorous Bayesian approach for screening data sets for autosomal and sex chromosomal aneuploidies. This package takes as input the number of (deduplicated) reads mapping to chromosomes 1-22 and the X and Y chromosomes, and models these using a Dirichlet-multinomial distribution. From this, This package returns posterior probabilities of sex chromosomal karyotypes (XX, XY, XXY, XYY, XXX and X) and full autosomal aneuploidies (trisomy 13, trisomy 18 and trisomy 21). This package also returns two diagnostic statistics: (i) a posterior probability addressing whether contamination between XX and XY may explain the observed sex chromosomal aneuploidy, and (ii) a chi-squared statistic measuring whether the observed read counts are too divergent from the underlying distribution (and may represent abnormal sequencing/quality issues).
Author: Adam B. Rohrlach [aut, cph] ,
Jono Tuke [aut, cre] ,
Wolfgang Haak [aut]
Maintainer: Jono Tuke <simon.tuke@adelaide.edu.au>
Diff between RChASM versions 1.0.0 dated 2026-03-03 and 1.0.1 dated 2026-04-22
DESCRIPTION | 10 +++-- MD5 | 13 ++++--- NEWS.md | 4 ++ inst/doc/example_analysis.R | 10 +---- inst/doc/example_analysis.Rmd | 60 +++++++++++++++++++---------------- inst/doc/example_analysis.html | 69 ++++++++++++++++++++--------------------- inst/extdata/CHASM_input.sh |only vignettes/example_analysis.Rmd | 60 +++++++++++++++++++---------------- 8 files changed, 119 insertions(+), 107 deletions(-)
Title: Efficient Serialization of R Objects
Description: Streamlines and accelerates the process of saving and loading R objects, improving speed and compression compared to other methods. The package provides two compression formats: the 'qs2' format, which uses R serialization via the C API while optimizing compression and disk I/O, and the 'qdata' format, featuring custom serialization for slightly faster performance and better compression. Additionally, the 'qs2' format can be directly converted to the standard 'RDS' format, ensuring long-term compatibility with future versions of R.
Author: Travers Ching [aut, cre, cph],
Yann Collet [ctb, cph] ,
Facebook, Inc. [cph] ,
Reichardt Tino [ctb, cph] ,
Skibinski Przemyslaw [ctb, cph] ,
Mori Yuta [ctb, cph] ,
Francesc Alted [ctb, cph]
Maintainer: Travers Ching <traversc@gmail.com>
Diff between qs2 versions 0.1.7 dated 2026-01-20 and 0.2.0 dated 2026-04-22
qs2-0.1.7/qs2/src/io |only qs2-0.1.7/qs2/src/qd_constants.h |only qs2-0.1.7/qs2/src/qs_unwind_protect.h |only qs2-0.1.7/qs2/src/xxhash |only qs2-0.1.7/qs2/tests/correctness_testing.R |only qs2-0.2.0/qs2/ChangeLog | 19 qs2-0.2.0/qs2/DESCRIPTION | 14 qs2-0.2.0/qs2/MD5 | 147 qs2-0.2.0/qs2/NAMESPACE | 6 qs2-0.2.0/qs2/R/RcppExports.R | 20 qs2-0.2.0/qs2/R/generate_test_data.R |only qs2-0.2.0/qs2/R/qopt.R | 9 qs2-0.2.0/qs2/R/qs_cache.R |only qs2-0.2.0/qs2/R/qs_to_rds.R | 68 qs2-0.2.0/qs2/R/qx_functions.R | 17 qs2-0.2.0/qs2/R/zstd_file_functions.R | 19 qs2-0.2.0/qs2/README.md | 131 qs2-0.2.0/qs2/configure | 60 qs2-0.2.0/qs2/configure.ac | 33 qs2-0.2.0/qs2/inst/doc/vignette.R | 4 qs2-0.2.0/qs2/inst/doc/vignette.html | 241 - qs2-0.2.0/qs2/inst/doc/vignette.rmd | 119 qs2-0.2.0/qs2/inst/include/qdata-cpp |only qs2-0.2.0/qs2/inst/include/qdata_cpp_external.h |only qs2-0.2.0/qs2/inst/include/qs2_external.h | 88 qs2-0.2.0/qs2/man/generate_test_data.Rd |only qs2-0.2.0/qs2/man/qd_deserialize.Rd | 4 qs2-0.2.0/qs2/man/qd_read.Rd | 4 qs2-0.2.0/qs2/man/qd_save.Rd | 2 qs2-0.2.0/qs2/man/qd_serialize.Rd | 2 qs2-0.2.0/qs2/man/qopt.Rd | 9 qs2-0.2.0/qs2/man/qs_cache.Rd |only qs2-0.2.0/qs2/man/qs_deserialize.Rd | 2 qs2-0.2.0/qs2/man/qs_read.Rd | 2 qs2-0.2.0/qs2/man/qs_save.Rd | 2 qs2-0.2.0/qs2/man/qs_serialize.Rd | 2 qs2-0.2.0/qs2/man/rds_to_qs.Rd | 10 qs2-0.2.0/qs2/man/zstd_compress_bound.Rd | 11 qs2-0.2.0/qs2/man/zstd_file_functions.Rd | 6 qs2-0.2.0/qs2/man/zstd_in_out.Rd | 15 qs2-0.2.0/qs2/src/Makevars.in | 4 qs2-0.2.0/qs2/src/Makevars.win | 9 qs2-0.2.0/qs2/src/RcppExports.cpp | 57 qs2-0.2.0/qs2/src/ZSTD/zstd.c | 4391 ++++++++++++++--------- qs2-0.2.0/qs2/src/ZSTD/zstd.h | 366 + qs2-0.2.0/qs2/src/ZSTD/zstd_errors.h |only qs2-0.2.0/qs2/src/ascii_encoding/base85.h | 3 qs2-0.2.0/qs2/src/ascii_encoding/base91.h | 25 qs2-0.2.0/qs2/src/qd_deserializer.h | 231 - qs2-0.2.0/qs2/src/qd_serializer.h | 102 qs2-0.2.0/qs2/src/qdata_cpp_external_api.h |only qs2-0.2.0/qs2/src/qs_deserializer.h | 2 qs2-0.2.0/qs2/src/qs_serializer.h | 2 qs2-0.2.0/qs2/src/qx_dump.h | 21 qs2-0.2.0/qs2/src/qx_file_headers.h | 210 - qs2-0.2.0/qs2/src/qx_functions.cpp | 522 +- qs2-0.2.0/qs2/src/qx_unwind_protect.h |only qs2-0.2.0/qs2/src/r_error_policy.h |only qs2-0.2.0/qs2/src/zstd_file_functions.h | 350 + qs2-0.2.0/qs2/tests/00_smoke_testing.R |only qs2-0.2.0/qs2/tests/qdata_cpp_external_testing.R |only qs2-0.2.0/qs2/tests/utility_testing.R | 38 qs2-0.2.0/qs2/tests/zz_correctness_testing.R |only qs2-0.2.0/qs2/vignettes/vignette.rmd | 119 64 files changed, 4610 insertions(+), 2908 deletions(-)
Title: Tools for Building OLS Regression Models
Description: Tools designed to make it easier for users, particularly beginner/intermediate R users
to build ordinary least squares regression models. Includes comprehensive regression output,
heteroskedasticity tests, collinearity diagnostics, residual diagnostics, measures of influence,
model fit assessment and variable selection procedures.
Author: Aravind Hebbali [aut, cre]
Maintainer: Aravind Hebbali <hebbali.aravind@gmail.com>
Diff between olsrr versions 0.6.1 dated 2024-11-06 and 0.7.0 dated 2026-04-22
DESCRIPTION | 8 LICENSE | 2 MD5 | 220 +++++---- NAMESPACE | 29 + NEWS.md | 20 R/ols-anova.R |only R/ols-best-subsets-regression.R | 20 R/ols-model-info.R |only R/ols-model-performance.R |only R/ols-step.R | 23 R/ols-stepaic-backward-regression.R | 38 + R/ols-stepaic-both-regression.R | 36 + R/ols-stepaic-forward-regression.R | 38 + R/ols-stepwise-backward-regression.R | 20 R/ols-stepwise-forward-regression.R | 14 R/ols-stepwise-hierarchical.R | 41 + R/ols-stepwise-regression.R | 15 R/ols-stepwise-utils.R | 9 R/output.R | 100 ++++ R/todo.R |only R/utils.R | 78 --- README.md | 4 build/vignette.rds |binary inst/doc/heteroskedasticity.html | 5 inst/doc/influence_measures.html | 5 inst/doc/intro.html | 5 inst/doc/regression_diagnostics.html | 9 inst/doc/residual_diagnostics.html | 7 inst/doc/variable_selection.html | 5 man/ols_anova.Rd |only man/ols_compare_model_performance.Rd |only man/ols_count_obs.Rd |only man/ols_count_parameters.Rd |only man/ols_get_call.Rd |only man/ols_get_data.Rd |only man/ols_get_deviance.Rd |only man/ols_get_df.Rd |only man/ols_get_formula.Rd |only man/ols_get_interaction_terms.Rd |only man/ols_get_intercept.Rd |only man/ols_get_model_matrix.Rd |only man/ols_get_parameters.Rd |only man/ols_get_predicted.Rd |only man/ols_get_predictors.Rd |only man/ols_get_residuals.Rd |only man/ols_get_response.Rd |only man/ols_get_sigma.Rd |only man/ols_get_variables.Rd |only man/ols_get_vcov.Rd |only man/ols_has_intercept.Rd |only man/ols_model_info.Rd |only man/ols_model_performance.Rd |only man/ols_step_backward_adj_r2.Rd | 6 man/ols_step_backward_aic.Rd | 8 man/ols_step_backward_p.Rd | 7 man/ols_step_backward_r2.Rd | 6 man/ols_step_backward_sbc.Rd | 6 man/ols_step_backward_sbic.Rd | 6 man/ols_step_both_adj_r2.Rd | 6 man/ols_step_both_aic.Rd | 6 man/ols_step_both_p.Rd | 7 man/ols_step_both_r2.Rd | 6 man/ols_step_both_sbc.Rd | 6 man/ols_step_both_sbic.Rd | 6 man/ols_step_forward_adj_r2.Rd | 6 man/ols_step_forward_aic.Rd | 6 man/ols_step_forward_p.Rd | 6 man/ols_step_forward_r2.Rd | 6 man/ols_step_forward_sbc.Rd | 6 man/ols_step_forward_sbic.Rd | 6 tests/testthat/_snaps/anova.md |only tests/testthat/_snaps/model-performance.md |only tests/testthat/_snaps/step-backward-output.md | 230 +++++++++ tests/testthat/_snaps/step-forward-output.md | 241 ++++++++++ tests/testthat/_snaps/stepwise-output.md | 221 +++++++++ tests/testthat/_snaps/visual/allplot-1.svg | 4 tests/testthat/_snaps/visual/allplot-2.svg | 4 tests/testthat/_snaps/visual/allplot-3.svg | 4 tests/testthat/_snaps/visual/allplot-4.svg | 4 tests/testthat/_snaps/visual/allplot-5.svg | 4 tests/testthat/_snaps/visual/allplot-6.svg | 4 tests/testthat/_snaps/visual/bestplot-1.svg | 66 +- tests/testthat/_snaps/visual/bestplot-2.svg | 66 +- tests/testthat/_snaps/visual/bestplot-3.svg | 70 +- tests/testthat/_snaps/visual/bestplot-4.svg | 72 +- tests/testthat/_snaps/visual/bestplot-5.svg | 66 +- tests/testthat/_snaps/visual/bestplot-6.svg | 66 +- tests/testthat/_snaps/visual/cooks-d-bar-chart-threshold.svg | 2 tests/testthat/_snaps/visual/cooks-d-bar-chart.svg | 2 tests/testthat/_snaps/visual/cooks-d-bar-plot-threshold.svg | 2 tests/testthat/_snaps/visual/cooks-d-bar-plot-type-2.svg | 2 tests/testthat/_snaps/visual/cooks-d-bar-plot-type-3.svg | 2 tests/testthat/_snaps/visual/cooks-d-bar-plot-type-4.svg | 2 tests/testthat/_snaps/visual/cooks-d-bar-plot-type-5.svg | 2 tests/testthat/_snaps/visual/cooks-d-bar-plot.svg | 2 tests/testthat/_snaps/visual/dfbetas-1.svg | 2 tests/testthat/_snaps/visual/dfbetas-2.svg | 2 tests/testthat/_snaps/visual/dfbetas-3.svg | 2 tests/testthat/_snaps/visual/dfbetas-4.svg | 2 tests/testthat/_snaps/visual/dfbetas-5.svg | 2 tests/testthat/_snaps/visual/dffits-cutoff-plot.svg | 2 tests/testthat/_snaps/visual/dffits-plot.svg | 2 tests/testthat/_snaps/visual/diag-2.svg | 2 tests/testthat/_snaps/visual/diag-3.svg | 4 tests/testthat/_snaps/visual/diag-5.svg | 2 tests/testthat/_snaps/visual/diag-6.svg | 2 tests/testthat/_snaps/visual/diag-9.svg | 22 tests/testthat/_snaps/visual/dsrvsp-plot.svg | 2 tests/testthat/_snaps/visual/resp-viz-histogram.svg | 16 tests/testthat/_snaps/visual/rslev-1.svg | 4 tests/testthat/_snaps/visual/sbic-both-direction-regression-plot-details.svg |only tests/testthat/_snaps/visual/sbic-both-direction-regression-plot.svg |only tests/testthat/_snaps/visual/stanres-1.svg | 2 tests/testthat/_snaps/visual/studres-1.svg | 2 tests/testthat/test-anova.R |only tests/testthat/test-best-subsets.R | 6 tests/testthat/test-model-info.R |only tests/testthat/test-model-performance.R |only tests/testthat/test-step-backward-output.R | 7 tests/testthat/test-step-backward.R | 14 tests/testthat/test-step-forward-output.R | 7 tests/testthat/test-step-forward.R | 14 tests/testthat/test-stepaic-b.R | 9 tests/testthat/test-stepaic-both.R | 8 tests/testthat/test-stepaic-f.R | 7 tests/testthat/test-stepwise-output.R | 7 tests/testthat/test-stepwise.R | 7 tests/testthat/test-visual.R | 4 128 files changed, 1644 insertions(+), 519 deletions(-)
More information about GLMBasedRaschEstimation at CRAN
Permanent link
Title: Access and Analyse 'VALD' Data via Our External 'APIs'
Description: Provides helper functions and wrappers to simplify authentication,
data retrieval, and result processing from the 'VALD' 'APIs'.
Designed to streamline integration for analysts and researchers working
with 'VALD's external 'APIs'.
For further documentation on integrating with 'VALD' 'APIs', see:
<https://support.vald.com/hc/en-au/articles/23415335574553-How-to-integrate-with-VALD-APIs>.
For a step-by-step guide to using this package, see:
<https://support.vald.com/hc/en-au/articles/48730811824281-A-guide-to-using-the-valdr-R-package>.
Author: Kieran Harrison [aut, cre],
VALD Support [ctb],
VALD [cph]
Maintainer: Kieran Harrison <k.harrison@vald.com>
Diff between valdr versions 2.2.0 dated 2026-02-25 and 3.0.0 dated 2026-04-22
DESCRIPTION | 6 MD5 | 30 +++- NAMESPACE | 3 R/config.R | 14 +- R/forcedecks_tests.R | 17 -- R/forcedecks_trials.R | 5 R/forceframe_reps_by_id.R |only R/session.R | 75 ++++++++++ R/smartspeed_tests.R |only R/utils.R | 219 ++++++++++++++++++++++++++++++++ man/dot-build_forcedecks_df.Rd |only man/dot-build_forceframe_reps_df.Rd |only man/dot-build_smartspeed_df.Rd |only man/dot-extract_nested.Rd |only man/dot-extract_nested_json.Rd |only man/get_forceframe_repetitions_by_id.Rd |only man/get_forceframe_reps_by_id.Rd |only man/get_forceframe_tests_only.Rd | 2 man/get_nordbord_tests_only.Rd | 2 man/get_smartspeed_data.Rd |only man/get_smartspeed_tests.Rd |only man/get_smartspeed_tests_only.Rd |only 22 files changed, 335 insertions(+), 38 deletions(-)
Title: Statistical Inference for Unsupervised Learning
Description: Test for association between the observed data and their estimated latent variables. The jackstraw package provides a resampling strategy and testing scheme to estimate statistical significance of association between the observed data and their latent variables. Depending on the data type and the analysis aim, the latent variables may be estimated by principal component analysis (PCA), factor analysis (FA), K-means clustering, and related unsupervised learning algorithms. The jackstraw methods learn over-fitting characteristics inherent in this circular analysis, where the observed data are used to estimate the latent variables and used again to test against that estimated latent variables. When latent variables are estimated by PCA, the jackstraw enables statistical testing for association between observed variables and latent variables, as estimated by low-dimensional principal components (PCs). This essentially leads to identifying variables that are significantly associated with PC [...truncated...]
Author: Neo Christopher Chung [aut, cre] ,
John D. Storey [aut] ,
Wei Hao [aut],
Alejandro Ochoa [aut]
Maintainer: Neo Christopher Chung <nchchung@gmail.com>
This is a re-admission after prior archival of version 1.3.17 dated 2024-09-16
Diff between jackstraw versions 1.3.17 dated 2024-09-16 and 1.3.21 dated 2026-04-22
DESCRIPTION | 20 +++---- MD5 | 36 +++++++------ NAMESPACE | 2 NEWS.md | 24 ++++++++ R/jackstraw_lfa.R | 13 ++++ R/ncp_est.R |only R/pvals_nc_chisq.R |only README.md | 3 - build/partial.rdb |binary man/Jurkat293T.Rd | 2 man/jackstraw_cluster.Rd | 4 - man/jackstraw_irlba.Rd | 2 man/jackstraw_kmeans.Rd | 2 man/jackstraw_kmeanspp.Rd | 2 man/jackstraw_lfa.Rd | 13 ++++ man/jackstraw_pam.Rd | 2 man/jackstraw_pca.Rd | 2 man/jackstraw_rpca.Rd | 2 man/ncp_est.Rd |only man/pvals_nc_chisq.Rd |only tests/testthat/test-jackstraw.R | 108 +++++++++++++++++++++++++++++++++++++--- 21 files changed, 189 insertions(+), 48 deletions(-)
Title: Quality Evaluation of Core Collections
Description: Implements various quality evaluation statistics to assess the
value of plant germplasm core collections using qualitative and
quantitative phenotypic trait data according to Odong et al. (2015)
<doi:10.1007/s00122-012-1971-y>.
Author: J. Aravind [aut, cre] ,
Vikender Kaur [aut] ,
Dhammaprakash Pandhari Wankhede [aut] ,
Joghee Nanjundan [aut] ,
ICAR-NBGPR [cph]
Maintainer: J. Aravind <j.aravind@icar.org.in>
Diff between EvaluateCore versions 0.1.4 dated 2025-12-18 and 0.1.5 dated 2026-04-22
DESCRIPTION | 12 MD5 | 78 ++-- NEWS.md | 8 R/EvaluateCore-deprecated.R | 2 R/bar.evaluate.core.R | 2 R/box.evaluate.core.R | 2 R/cassava_CC.R | 2 R/cassava_EC.R | 2 R/checks.evaluate.core.R | 2 R/chisquare.evalueate.core.R | 2 R/corr.evaluate.core.R | 2 R/coverage.evaluate.core.R | 2 R/cr.evaluate.core.R | 2 R/dist.evaluate.core.R | 2 R/diversity.evaluate.core.R | 154 ++++++--- R/freqdist.evaluate.core.R | 2 R/globals.R | 2 R/iqr.evaluate.core.R | 2 R/levene.evaluate.core.R | 2 R/pca.evaluate.core.R | 2 R/pdfdist.evaluate.core.R | 2 R/percentdiff.evaluate.core.R | 5 R/qq.evaluate.core.R | 2 R/rpr.evaluate.core.R | 2 R/scv.evaluate.core.R | 2 R/shannon.evaluate.core.R | 2 R/signtest.evaluate.core.R | 2 R/snk.evaluate.core.R | 2 R/ttest.evaluate.core.R | 2 R/vpf.evaluate.core.R | 2 R/vr.evaluate.core.R | 2 R/wilcox.evaluate.core.R | 2 R/xtra.R | 2 README.md | 107 ++---- build/partial.rdb |binary build/stage23.rdb |binary inst/CITATION | 4 inst/REFERENCES.bib | 610 +++++++++++++++++++++------------------ man/diversity.evaluate.core.Rd | 100 ++++-- man/percentdiff.evaluate.core.Rd | 3 40 files changed, 633 insertions(+), 504 deletions(-)
Title: Discover and Call 'Bund.dev' APIs
Description: Provides a registry of APIs listed on <https://bund.dev> and a core
'OpenAPI' client layer to explore specs and perform requests. Adapter helpers
return tidy data frames for supported APIs, with optional response caching and
rate limiting guidance.
Author: Michael Buecker [aut, cre]
Maintainer: Michael Buecker <michael.buecker@fh-muenster.de>
This is a re-admission after prior archival of version 0.2.1 dated 2026-02-16
Diff between bunddev versions 0.2.1 dated 2026-02-16 and 0.2.3 dated 2026-04-22
DESCRIPTION | 10 MD5 | 533 ++++++++++---------- NAMESPACE | 8 NEWS.md | 37 + R/adapt_abfallnavi.R | 180 +++++-- R/adapt_ausbildungssuche.R | 88 ++- R/adapt_autobahn.R | 417 +++++++++++++--- R/adapt_bewerberboerse.R | 116 +++- R/adapt_bundeshaushalt.R | 55 +- R/adapt_bundesrat.R | 202 +++++-- R/adapt_bundestag.R | 144 ++++- R/adapt_bundestag_lobbyregister.R | 35 + R/adapt_dashboard_deutschland.R | 103 +++- R/adapt_ddb.R | 97 +++ R/adapt_destatis.R | 94 ++- R/adapt_deutschlandatlas.R | 42 + R/adapt_diga.R | 264 ++++++++-- R/adapt_dip_bundestag.R | 638 +++++++++++++++++++++---- R/adapt_dwd.R | 231 ++++++--- R/adapt_eco_visio.R | 35 + R/adapt_feiertage.R | 21 R/adapt_handelsregister.R | 38 + R/adapt_hilfsmittel.R | 285 +++++++++-- R/adapt_hochwasserzentralen.R | 96 ++- R/adapt_jobsuche.R | 131 ++++- R/adapt_klinikatlas.R |only R/adapt_ladestationen.R | 47 + R/adapt_lebensmittelwarnung.R | 44 + R/adapt_luftqualitaet.R | 278 +++++++--- R/adapt_marktstammdaten.R | 303 +++++++++-- R/adapt_mudab.R | 251 +++++++-- R/adapt_nina.R | 347 +++++++++---- R/adapt_pegel_online.R | 178 +++++- R/adapt_pflanzenschutzmittelzulassung.R | 141 ++++- R/adapt_regionalatlas.R | 31 + R/adapt_smard.R | 54 +- R/adapt_tagesschau.R | 123 +++- R/adapt_travelwarning.R | 208 ++++++-- R/bunddev_endpoints.R | 1 R/core_auth.R | 17 R/core_cache.R | 38 + R/core_call.R | 18 R/core_openapi.R | 30 + R/core_registry.R | 24 R/core_throttle.R | 14 R/core_tidy.R | 7 R/core_time.R | 2 README.md | 8 build/vignette.rds |binary inst/doc/getting-started.html | 4 inst/registry/endpoints.yml | 32 + inst/registry/registry.yml | 9 man/abfallnavi_fraktionen.Rd | 27 - man/abfallnavi_fraktionen_hausnummern.Rd | 27 - man/abfallnavi_fraktionen_strassen.Rd | 27 - man/abfallnavi_hausnummern.Rd | 27 - man/abfallnavi_kalender_download.Rd | 27 - man/abfallnavi_ort.Rd | 25 man/abfallnavi_orte.Rd | 27 - man/abfallnavi_strassen.Rd | 30 + man/abfallnavi_termine_hausnummern.Rd | 29 - man/abfallnavi_termine_strassen.Rd | 29 - man/adapt_klinikatlas.Rd |only man/ausbildungssuche_details.Rd | 16 man/ausbildungssuche_search.Rd | 86 ++- man/autobahn_charging_station_details.Rd | 36 + man/autobahn_charging_stations.Rd | 56 +- man/autobahn_closure_details.Rd | 35 + man/autobahn_closures.Rd | 56 +- man/autobahn_parking_lorries.Rd | 56 +- man/autobahn_parking_lorry_details.Rd | 36 + man/autobahn_roads.Rd | 22 man/autobahn_roadwork_details.Rd | 35 + man/autobahn_roadworks.Rd | 56 +- man/autobahn_warning_details.Rd | 35 + man/autobahn_warnings.Rd | 56 +- man/autobahn_webcam_details.Rd | 35 + man/autobahn_webcams.Rd | 56 +- man/bewerberboerse_details.Rd | 51 + man/bewerberboerse_search.Rd | 66 ++ man/bunddev_auth_get.Rd | 7 man/bunddev_auth_set.Rd | 16 man/bunddev_cache_dir.Rd | 19 man/bunddev_call.Rd | 30 + man/bunddev_call_tidy.Rd | 19 man/bunddev_endpoints.Rd | 33 + man/bunddev_info.Rd | 8 man/bunddev_list.Rd | 9 man/bunddev_ms_to_posix.Rd | 14 man/bunddev_parameter_values.Rd | 16 man/bunddev_parameters.Rd | 25 man/bunddev_parameters_for.Rd | 16 man/bunddev_rate_limit_get.Rd | 10 man/bunddev_rate_limit_set.Rd | 10 man/bunddev_registry.Rd | 18 man/bunddev_search.Rd | 9 man/bunddev_spec.Rd | 18 man/bunddev_spec_path.Rd | 15 man/bunddev_timestamp_to_ms.Rd | 14 man/bundeshaushalt_budget_data.Rd | 65 +- man/bundesrat_aktuelles.Rd | 32 + man/bundesrat_mitglieder.Rd | 32 + man/bundesrat_plenum_aktuelle_sitzung.Rd | 32 + man/bundesrat_plenum_chronologisch.Rd | 32 + man/bundesrat_plenum_kompakt.Rd | 32 + man/bundesrat_plenum_naechste_sitzungen.Rd | 32 + man/bundesrat_praesidium.Rd | 32 + man/bundesrat_startlist.Rd | 34 + man/bundesrat_stimmverteilung.Rd | 32 + man/bundesrat_termine.Rd | 32 + man/bundestag_article.Rd | 28 - man/bundestag_ausschuesse.Rd | 28 - man/bundestag_ausschuss.Rd | 28 - man/bundestag_conferences.Rd | 28 - man/bundestag_lobbyregister_search.Rd | 35 + man/bundestag_mdb_bio.Rd | 28 - man/bundestag_mdb_index.Rd | 28 - man/bundestag_speaker.Rd | 28 - man/bundestag_video_feed.Rd | 28 - man/dashboard_deutschland_geo.Rd | 41 + man/dashboard_deutschland_get.Rd | 51 + man/dashboard_deutschland_indicators.Rd | 26 - man/ddb_institution_sectors.Rd | 20 man/ddb_institutions.Rd | 50 + man/ddb_search.Rd | 49 + man/destatis_catalogue_cubes.Rd | 41 + man/destatis_catalogue_tables.Rd | 41 + man/destatis_data_cube.Rd | 39 + man/destatis_data_table.Rd | 39 + man/deutschlandatlas_query.Rd | 50 + man/diga_catalog_entries.Rd | 52 +- man/diga_charge_item_definitions.Rd | 54 +- man/diga_device_definitions.Rd | 53 +- man/diga_organizations.Rd | 52 +- man/diga_questionnaire_responses.Rd | 51 + man/diga_questionnaires.Rd | 52 +- man/dip_bundestag_aktivitaet.Rd | 54 +- man/dip_bundestag_aktivitaet_list.Rd | 72 ++ man/dip_bundestag_drucksache.Rd | 60 ++ man/dip_bundestag_drucksache_list.Rd | 78 ++- man/dip_bundestag_drucksache_text.Rd | 43 + man/dip_bundestag_drucksache_text_list.Rd | 79 ++- man/dip_bundestag_person.Rd | 52 +- man/dip_bundestag_person_list.Rd | 70 ++ man/dip_bundestag_plenarprotokoll.Rd | 55 +- man/dip_bundestag_plenarprotokoll_list.Rd | 73 ++ man/dip_bundestag_plenarprotokoll_text.Rd | 43 + man/dip_bundestag_plenarprotokoll_text_list.Rd | 74 ++ man/dip_bundestag_vorgang.Rd | 63 ++ man/dip_bundestag_vorgang_list.Rd | 87 ++- man/dip_bundestag_vorgangsposition.Rd | 66 ++ man/dip_bundestag_vorgangsposition_list.Rd | 84 +++ man/dwd_alpine_forecast_text.Rd | 23 man/dwd_avalanche_warnings.Rd | 23 man/dwd_coast_warnings.Rd | 44 + man/dwd_crowd_reports.Rd | 48 + man/dwd_municipality_warnings.Rd | 37 + man/dwd_sea_warning_text.Rd | 23 man/dwd_station_overview.Rd | 51 + man/dwd_warnings_nowcast.Rd | 54 +- man/eco_visio_counters.Rd | 22 man/eco_visio_data.Rd | 19 man/feiertage_list.Rd | 21 man/handelsregister_search.Rd | 38 + man/hilfsmittel_nachweisschema.Rd | 43 + man/hilfsmittel_produkt.Rd | 60 ++ man/hilfsmittel_produktart.Rd | 53 +- man/hilfsmittel_produkte.Rd | 54 +- man/hilfsmittel_produktgruppe.Rd | 57 +- man/hilfsmittel_tree.Rd | 28 - man/hilfsmittel_untergruppe.Rd | 53 +- man/hochwasserzentralen_bundeslaender.Rd | 23 man/hochwasserzentralen_bundesland_geojson.Rd | 39 + man/hochwasserzentralen_bundesland_info.Rd | 23 man/hochwasserzentralen_lagepegel.Rd | 23 man/hochwasserzentralen_pegel_info.Rd | 23 man/jobsuche_logo.Rd | 17 man/jobsuche_search.Rd | 79 ++- man/jobsuche_search_app.Rd | 79 ++- man/klinikatlas_german_places.Rd |only man/klinikatlas_german_states.Rd |only man/klinikatlas_hospital_detail.Rd |only man/klinikatlas_icd_codes.Rd |only man/klinikatlas_locations.Rd |only man/klinikatlas_ops_codes.Rd |only man/klinikatlas_search.Rd |only man/klinikatlas_states.Rd |only man/ladestationen_query.Rd | 47 + man/lebensmittelwarnung_warnings.Rd | 44 + man/luftqualitaet_airquality.Rd | 43 + man/luftqualitaet_airquality_limits.Rd | 31 + man/luftqualitaet_annualbalances.Rd | 44 + man/luftqualitaet_components.Rd | 45 + man/luftqualitaet_measures.Rd | 43 + man/luftqualitaet_measures_limits.Rd | 33 + man/luftqualitaet_meta.Rd | 45 + man/luftqualitaet_networks.Rd | 44 + man/luftqualitaet_scopes.Rd | 45 + man/luftqualitaet_stationsettings.Rd | 44 + man/luftqualitaet_stationtypes.Rd | 43 + man/luftqualitaet_thresholds.Rd | 45 + man/luftqualitaet_transgressions.Rd | 45 + man/luftqualitaet_transgressiontypes.Rd | 44 + man/marktstammdaten_filters_gaserzeugung.Rd | 43 + man/marktstammdaten_filters_gasverbrauch.Rd | 43 + man/marktstammdaten_filters_stromerzeugung.Rd | 43 + man/marktstammdaten_filters_stromverbrauch.Rd | 43 + man/marktstammdaten_gaserzeugung.Rd | 57 +- man/marktstammdaten_gasverbrauch.Rd | 57 +- man/marktstammdaten_stromerzeugung.Rd | 58 +- man/marktstammdaten_stromverbrauch.Rd | 57 +- man/mudab_parameter_values.Rd | 38 + man/mudab_parameters.Rd | 33 + man/mudab_parameters_biologie.Rd | 33 + man/mudab_parameters_biota.Rd | 33 + man/mudab_parameters_sediment.Rd | 33 + man/mudab_parameters_wasser.Rd | 33 + man/mudab_plc_measurements.Rd | 44 + man/mudab_plc_parameters.Rd | 36 + man/mudab_plc_stations.Rd | 34 + man/mudab_project_stations.Rd | 46 + man/mudab_stations.Rd | 31 + man/nina_archive_mowas.Rd | 36 + man/nina_archive_mowas_mapping.Rd | 36 + man/nina_covid_infos.Rd | 35 + man/nina_covid_map.Rd | 35 + man/nina_covid_rules.Rd | 36 + man/nina_covid_ticker.Rd | 35 + man/nina_covid_ticker_message.Rd | 36 + man/nina_dashboard.Rd | 39 + man/nina_event_code.Rd | 36 + man/nina_event_codes.Rd | 39 + man/nina_faqs.Rd | 40 + man/nina_logo.Rd | 36 + man/nina_logos.Rd | 39 + man/nina_mapdata.Rd | 46 + man/nina_mowas_rss.Rd | 36 + man/nina_notfalltipps.Rd | 40 + man/nina_version.Rd | 37 + man/nina_warning.Rd | 36 + man/nina_warning_geojson.Rd | 36 + man/nina_warning_json.Rd | 44 + man/nina_warnings.Rd | 44 + man/pegel_online_measurements.Rd | 25 man/pegel_online_measurements_plot.Rd | 24 man/pegel_online_station.Rd | 57 +- man/pegel_online_stations.Rd | 61 ++ man/pegel_online_timeseries.Rd | 42 + man/pegel_online_waters.Rd | 55 +- man/psm_anwendungen.Rd | 58 ++ man/psm_kultur_gruppen.Rd | 36 + man/psm_mittel.Rd | 39 + man/psm_schadorg_gruppen.Rd | 36 + man/psm_stand.Rd | 20 man/psm_wirkstoffe.Rd | 37 + man/regionalatlas_query.Rd | 31 + man/smard_indices.Rd | 18 man/smard_table.Rd | 24 man/smard_timeseries.Rd | 23 man/tagesschau_channels.Rd | 29 - man/tagesschau_homepage.Rd | 57 +- man/tagesschau_news.Rd | 28 - man/tagesschau_search.Rd | 29 - man/travelwarning_healthcare.Rd | 33 + man/travelwarning_representatives_country.Rd | 51 + man/travelwarning_representatives_germany.Rd | 51 + man/travelwarning_state_names.Rd | 34 + man/travelwarning_warning.Rd | 44 + man/travelwarning_warnings.Rd | 41 + tests/testthat/test-dashboard-deutschland.R | 17 tests/testthat/test-endpoints.R | 18 tests/testthat/test-klinikatlas.R |only tests/testthat/test-registry.R | 9 273 files changed, 11769 insertions(+), 2531 deletions(-)
Title: Spatial Analysis in Archaeology from Refitting Fragments
Description: Methods to analyse spatial units in archaeology from the refitting relationships between fragments of objects scattered in these units (e.g. stratigraphic layers). Graphs are used to model archaeological observations. The package is mainly based on the 'igraph' package for graph analysis. Functions can: 1) create, manipulate, visualise, and simulate fragmentation graphs, 2) measure the cohesion and admixture of archaeological spatial units, and 3) characterise the topology of a specific set of refitting relationships. A series of published empirical datasets is included. Documentation about 'archeofrag' is provided by a vignette and by the accompanying scientific papers: Plutniak (2021, Journal of Archaeological Science, <doi:10.1016/j.jas.2021.105501>) and Plutniak (2022, Journal of Open Source Software, <doi:10.21105/joss.04335>). This package is complemented by the 'archeofrag.gui' R package, a companion GUI application available at <https://analytics.huma-num.fr/Seba [...truncated...]
Author: Sebastien Plutniak [aut, cre]
Maintainer: Sebastien Plutniak <sebastien.plutniak@posteo.net>
Diff between archeofrag versions 1.2.3 dated 2025-09-26 and 1.2.4 dated 2026-04-22
DESCRIPTION | 10 +-- MD5 | 17 +++--- NAMESPACE | 1 NEWS.md | 6 ++ R/frag.cohesion.ranking.R |only R/make_frag_object.R | 4 - TODO | 19 +++++-- inst/doc/archeofrag-vignette.html | 72 ++++++++++++++-------------- man/frag.cohesion.ranking.Rd |only man/frag.layers.cohesion.Rd | 2 tests/testthat/test.frag.cohesion.ranking.R |only 11 files changed, 76 insertions(+), 55 deletions(-)
Title: Weighting for Covariate Balance in Observational Studies
Description: Generates balancing weights for causal effect estimation in observational studies with
binary, multi-category, or continuous point or longitudinal treatments by easing and
extending the functionality of several R packages and providing in-house estimation methods.
Available methods include those that rely on parametric modeling, optimization, and machine learning. Also
allows for assessment of weights and checking of covariate balance by interfacing directly
with the 'cobalt' package. Methods for estimating weighted regression models that take into account
uncertainty in the estimation of the weights via M-estimation or bootstrapping are available. See the vignette "Installing Supporting Packages" for instructions on how
to install any optional package 'WeightIt' uses, including those that may not be on CRAN.
Author: Noah Greifer [aut, cre]
Maintainer: Noah Greifer <noah.greifer@gmail.com>
Diff between WeightIt versions 1.6.0 dated 2026-03-19 and 1.7.0 dated 2026-04-22
WeightIt-1.6.0/WeightIt/R/arg_functions.R |only WeightIt-1.7.0/WeightIt/DESCRIPTION | 18 WeightIt-1.7.0/WeightIt/MD5 | 137 - WeightIt-1.7.0/WeightIt/NAMESPACE | 2 WeightIt-1.7.0/WeightIt/NEWS.md | 20 WeightIt-1.7.0/WeightIt/R/ESS.R | 4 WeightIt-1.7.0/WeightIt/R/anova.glm_weightit.R | 68 WeightIt-1.7.0/WeightIt/R/as.weightit.R | 68 WeightIt-1.7.0/WeightIt/R/calibrate.R | 15 WeightIt-1.7.0/WeightIt/R/coxph_weightit.R |only WeightIt-1.7.0/WeightIt/R/dist_functions.R | 28 WeightIt-1.7.0/WeightIt/R/functions_for_processing.R | 291 +- WeightIt-1.7.0/WeightIt/R/get_w_from_ps.R | 29 WeightIt-1.7.0/WeightIt/R/glm_weightit-methods.R | 153 - WeightIt-1.7.0/WeightIt/R/glm_weightit.R | 222 -- WeightIt-1.7.0/WeightIt/R/glm_weightit_helpers.R | 1097 ++++------ WeightIt-1.7.0/WeightIt/R/make_full_rank.R | 8 WeightIt-1.7.0/WeightIt/R/multinom_weightit.R | 184 + WeightIt-1.7.0/WeightIt/R/ordinal_weightit.R | 189 + WeightIt-1.7.0/WeightIt/R/plot.weightit.R | 4 WeightIt-1.7.0/WeightIt/R/predict.glm_weightit.R | 42 WeightIt-1.7.0/WeightIt/R/sbps.R | 210 - WeightIt-1.7.0/WeightIt/R/summary.weightit.R | 53 WeightIt-1.7.0/WeightIt/R/treat.R | 2 WeightIt-1.7.0/WeightIt/R/trim.R | 42 WeightIt-1.7.0/WeightIt/R/utils.R | 202 - WeightIt-1.7.0/WeightIt/R/weightit.R | 115 - WeightIt-1.7.0/WeightIt/R/weightit.fit.R | 132 - WeightIt-1.7.0/WeightIt/R/weightit2bart.R | 6 WeightIt-1.7.0/WeightIt/R/weightit2cbps.R | 238 +- WeightIt-1.7.0/WeightIt/R/weightit2cfd.R | 136 - WeightIt-1.7.0/WeightIt/R/weightit2ebal.R | 801 +++---- WeightIt-1.7.0/WeightIt/R/weightit2energy.R | 136 - WeightIt-1.7.0/WeightIt/R/weightit2gbm.R | 76 WeightIt-1.7.0/WeightIt/R/weightit2glm.R | 91 WeightIt-1.7.0/WeightIt/R/weightit2ipt.R | 22 WeightIt-1.7.0/WeightIt/R/weightit2npcbps.R | 6 WeightIt-1.7.0/WeightIt/R/weightit2optweight.R | 51 WeightIt-1.7.0/WeightIt/R/weightit2ps.R | 4 WeightIt-1.7.0/WeightIt/R/weightit2super.R | 32 WeightIt-1.7.0/WeightIt/R/weightit2user.R | 20 WeightIt-1.7.0/WeightIt/R/weightitMSM.R | 34 WeightIt-1.7.0/WeightIt/README.md | 14 WeightIt-1.7.0/WeightIt/build/stage23.rdb |binary WeightIt-1.7.0/WeightIt/inst/doc/WeightIt.html | 62 WeightIt-1.7.0/WeightIt/inst/doc/estimating-effects.Rmd | 151 - WeightIt-1.7.0/WeightIt/inst/doc/estimating-effects.html | 711 +++--- WeightIt-1.7.0/WeightIt/inst/doc/installing-packages.html | 4 WeightIt-1.7.0/WeightIt/man/WeightIt-package.Rd | 2 WeightIt-1.7.0/WeightIt/man/coxph_weightit.Rd |only WeightIt-1.7.0/WeightIt/man/glm_weightit.Rd | 138 - WeightIt-1.7.0/WeightIt/man/macros/macros.Rd | 3 WeightIt-1.7.0/WeightIt/man/method_ebal.Rd | 24 WeightIt-1.7.0/WeightIt/man/method_ipt.Rd | 3 WeightIt-1.7.0/WeightIt/man/multinom_weightit.Rd |only WeightIt-1.7.0/WeightIt/man/ordinal_weightit.Rd |only WeightIt-1.7.0/WeightIt/man/predict.glm_weightit.Rd | 6 WeightIt-1.7.0/WeightIt/man/sbps.Rd | 29 WeightIt-1.7.0/WeightIt/man/weightit.Rd | 2 WeightIt-1.7.0/WeightIt/tests/testthat/helpers.R | 12 WeightIt-1.7.0/WeightIt/tests/testthat/test-glm_weightit.R | 6 WeightIt-1.7.0/WeightIt/tests/testthat/test-method_cbps.R | 32 WeightIt-1.7.0/WeightIt/tests/testthat/test-method_ebal.R | 98 WeightIt-1.7.0/WeightIt/tests/testthat/test-method_glm.R | 22 WeightIt-1.7.0/WeightIt/tests/testthat/test-method_ipt.R | 24 WeightIt-1.7.0/WeightIt/tests/testthat/test-moments.R | 9 WeightIt-1.7.0/WeightIt/tests/testthat/test-multinom_weightit.R | 6 WeightIt-1.7.0/WeightIt/tests/testthat/test-ordinal_weightit.R | 6 WeightIt-1.7.0/WeightIt/tests/testthat/test-update.R | 57 WeightIt-1.7.0/WeightIt/tests/testthat/test-vcov_arg.R | 21 WeightIt-1.7.0/WeightIt/vignettes/estimating-effects.Rmd | 151 - WeightIt-1.7.0/WeightIt/vignettes/references.bib | 15 72 files changed, 3312 insertions(+), 3284 deletions(-)
Title: Evaluation of Tweedie Exponential Family Models
Description: Maximum likelihood computations for Tweedie families, including the series expansion (Dunn and Smyth, 2005; <doi:10.1007/s11222-005-4070-y>) and the Fourier inversion (Dunn and Smyth, 2008; <doi:10.1007/s11222-007-9039-6>), and related methods.
Author: Peter K. Dunn [cre, aut]
Maintainer: Peter K. Dunn <pdunn2@usc.edu.au>
Diff between tweedie versions 3.0.17 dated 2026-02-27 and 3.0.19 dated 2026-04-22
tweedie-3.0.17/tweedie/src/Doxyfile |only tweedie-3.0.17/tweedie/src/deps.out |only tweedie-3.0.17/tweedie/src/docs |only tweedie-3.0.19/tweedie/DESCRIPTION | 8 tweedie-3.0.19/tweedie/MD5 | 427 ------------ tweedie-3.0.19/tweedie/NEWS.md | 10 tweedie-3.0.19/tweedie/R/tweedie_plot.R | 215 ++++-- tweedie-3.0.19/tweedie/build/partial.rdb |binary tweedie-3.0.19/tweedie/build/vignette.rds |binary tweedie-3.0.19/tweedie/inst/CITATION | 2 tweedie-3.0.19/tweedie/inst/doc/tweedie.html | 46 - tweedie-3.0.19/tweedie/man/tweedie_plot.Rd | 2 tweedie-3.0.19/tweedie/src/Calcs_K.f90 | 11 tweedie-3.0.19/tweedie/src/Makevars.HIDE |only tweedie-3.0.19/tweedie/src/Makevars.in | 7 tweedie-3.0.19/tweedie/src/accelerate.f90 | 78 +- tweedie-3.0.19/tweedie/tests/testthat/Rplots.pdf |binary tweedie-3.0.19/tweedie/tests/testthat/test-other-ptweedie.R | 3 tweedie-3.0.19/tweedie/tests/testthat/tests-valgrind.RHIDE |only 19 files changed, 251 insertions(+), 558 deletions(-)
Title: Mobility Oriented-Parity Metric
Description: A set of tools to perform multiple versions of the Mobility
Oriented-Parity metric. This multivariate analysis helps to characterize
levels of dissimilarity between a set of conditions of reference and another
set of conditions of interest. If predictive models are transferred to
conditions different from those over which models were calibrated (trained),
this metric helps to identify transfer conditions that differ
substantially from those of calibration. These tools are implemented
following principles proposed in Owens et al. (2013)
<doi:10.1016/j.ecolmodel.2013.04.011>, and expanded to obtain more detailed
results that aid in interpretation as in Cobos et al. (2024)
<doi:10.21425/fob.17.132916>.
Author: Marlon E. Cobos [aut, cre] ,
Hannah L. Owens [aut] ,
Jorge Soberon [aut] ,
A. Townsend Peterson [aut]
Maintainer: Marlon E. Cobos <manubio13@gmail.com>
Diff between mop versions 0.1.3 dated 2025-04-24 and 0.1.4 dated 2026-04-22
DESCRIPTION | 21 +++++++++------ MD5 | 26 +++++++++---------- NEWS.md | 6 ++++ R/out_range.R | 14 +++++----- README.md | 54 +++++++++++++++++++++-------------------- man/figures/README-load-1.png |binary man/figures/README-load-2.png |binary man/figures/README-plots-1.png |binary man/figures/README-plots-2.png |binary man/figures/README-plots-3.png |binary man/figures/README-plots-4.png |binary man/figures/README-plots-5.png |binary src/Makevars.ucrt | 1 src/Makevars.win | 2 - 14 files changed, 66 insertions(+), 58 deletions(-)
Title: A Centralized Metadata Object Focus on Clinical Trial Data
Programming Workflows
Description: Create an immutable container holding metadata for the
purpose of better enabling programming activities and functionality of
other packages within the clinical programming workflow.
Author: Liam Hobby [aut, cre],
Christina Fillmore [aut] ,
Bill Denney [aut],
Maya Gans [aut] ,
Ashley Tarasiewicz [aut],
Mike Stackhouse [aut] ,
Tamara Senior [aut],
GSK/Atorus JPT [cph, fnd]
Maintainer: Liam Hobby <liam.f.hobby@gsk.com>
Diff between metacore versions 0.2.1 dated 2025-07-21 and 0.3.0 dated 2026-04-22
metacore-0.2.1/metacore/man/check_columns.Rd |only metacore-0.3.0/metacore/DESCRIPTION | 12 metacore-0.3.0/metacore/MD5 | 83 metacore-0.3.0/metacore/NAMESPACE | 2 metacore-0.3.0/metacore/NEWS.md | 141 - metacore-0.3.0/metacore/R/DatasetMeta.R | 111 metacore-0.3.0/metacore/R/checks.R | 64 metacore-0.3.0/metacore/R/metacore-package.R |only metacore-0.3.0/metacore/R/metacore.R | 881 +++--- metacore-0.3.0/metacore/R/spec_builder.R | 1213 +++++---- metacore-0.3.0/metacore/R/utils.R | 271 +- metacore-0.3.0/metacore/R/validators.R | 609 ++-- metacore-0.3.0/metacore/R/xml_builders.R | 679 ++--- metacore-0.3.0/metacore/R/xml_helpers.R | 18 metacore-0.3.0/metacore/R/zzz.R | 70 metacore-0.3.0/metacore/README.md | 39 metacore-0.3.0/metacore/build/vignette.rds |binary metacore-0.3.0/metacore/inst/WORDLIST |only metacore-0.3.0/metacore/inst/doc/Building_Specification_Readers.R | 129 - metacore-0.3.0/metacore/inst/doc/Building_Specification_Readers.Rmd | 146 - metacore-0.3.0/metacore/inst/doc/Building_Specification_Readers.html | 676 ++--- metacore-0.3.0/metacore/inst/doc/Example.R | 2 metacore-0.3.0/metacore/inst/doc/Example.Rmd | 2 metacore-0.3.0/metacore/inst/doc/Example.html | 131 - metacore-0.3.0/metacore/man/create_tbl.Rd | 4 metacore-0.3.0/metacore/man/define_to_metacore.Rd | 21 metacore-0.3.0/metacore/man/figures/labeled-ds_vars.png |binary metacore-0.3.0/metacore/man/figures/labeled_schema.png |binary metacore-0.3.0/metacore/man/figures/lifecycle-deprecated.svg |only metacore-0.3.0/metacore/man/figures/lifecycle-experimental.svg |only metacore-0.3.0/metacore/man/figures/lifecycle-stable.svg |only metacore-0.3.0/metacore/man/figures/lifecycle-superseded.svg |only metacore-0.3.0/metacore/man/is_DatasetMeta.Rd | 6 metacore-0.3.0/metacore/man/metacore-package.Rd |only metacore-0.3.0/metacore/man/metacore.Rd | 24 metacore-0.3.0/metacore/man/select_dataset.Rd | 24 metacore-0.3.0/metacore/man/spec_to_metacore.Rd | 40 metacore-0.3.0/metacore/man/spec_type_to_ds_vars.Rd | 2 metacore-0.3.0/metacore/man/verify_DatasetMeta.Rd | 6 metacore-0.3.0/metacore/tests/testthat/spec_failed_regex.xlsx |only metacore-0.3.0/metacore/tests/testthat/test-checks.R | 77 metacore-0.3.0/metacore/tests/testthat/test-metacore.R | 487 +++ metacore-0.3.0/metacore/tests/testthat/test-reader.R | 1272 +++++----- metacore-0.3.0/metacore/tests/testthat/test-utils.R | 331 ++ metacore-0.3.0/metacore/tests/testthat/test-validators.R | 243 + metacore-0.3.0/metacore/vignettes/Building_Specification_Readers.Rmd | 146 - metacore-0.3.0/metacore/vignettes/Example.Rmd | 2 47 files changed, 4767 insertions(+), 3197 deletions(-)
Title: JavaScript Object Signing and Encryption
Description: Read and write JSON Web Keys (JWK, rfc7517), generate and verify JSON
Web Signatures (JWS, rfc7515) and encode/decode JSON Web Tokens (JWT, rfc7519)
<https://datatracker.ietf.org/wg/jose/documents/>. These standards provide
modern signing and encryption formats that are natively supported by browsers
via the JavaScript WebCryptoAPI <https://www.w3.org/TR/webcrypto/#jose>,
and used by services like OAuth 2.0, LetsEncrypt, and Github Apps.
Author: Jeroen Ooms [aut, cre]
Maintainer: Jeroen Ooms <jeroenooms@gmail.com>
Diff between jose versions 1.2.1 dated 2024-10-04 and 2.0.0 dated 2026-04-22
DESCRIPTION | 12 ++++----- MD5 | 41 +++++++++++++++++--------------- NAMESPACE | 5 ++++ NEWS | 4 +++ R/claim.R | 2 - R/jwt.R | 51 ++++++++++++++++++++++++++++++----------- R/read.R | 12 +++++++++ R/write.R | 20 ++++++++++++++++ build/vignette.rds |binary inst/doc/jwk.Rmd | 2 - inst/doc/jwk.html | 30 ++++++++++++------------ inst/doc/jwt.R | 4 +++ inst/doc/jwt.html | 32 +++++++++++++------------ man/jwt_claim.Rd | 2 - man/jwt_encode.Rd | 2 - tests/keys/ed25519.json |only tests/keys/ed25519.pub.json |only tests/testthat/test_ec.R | 5 ++++ tests/testthat/test_ed25519.R |only tests/testthat/test_examples.R | 11 ++++++++ tests/testthat/test_rsa.R | 4 +++ tests/testthat/test_sizes.R | 7 +++++ vignettes/jwk.Rmd | 2 - 23 files changed, 175 insertions(+), 73 deletions(-)
Title: Data Science for Psychologists
Description: All datasets and functions required for the examples and exercises of the book "Data Science for Psychologists" (by Hansjoerg Neth, Konstanz University, 2026, <doi:10.5281/zenodo.7229812>), freely available at <https://hneth-ds4psy.share.connect.posit.cloud/>. The book and corresponding courses introduce principles and methods of data science to students of psychology and other biological or social sciences. The 'ds4psy' package primarily provides datasets, but also functions for data generation and manipulation (e.g., of text and time data) and graphics that are used in the book and its exercises. All functions included in 'ds4psy' are designed to be explicit and instructive, rather than efficient or elegant.
Author: Hansjoerg Neth [aut, cre]
Maintainer: Hansjoerg Neth <h.neth@uni.kn>
Diff between ds4psy versions 1.2.0 dated 2025-11-05 and 1.3.0 dated 2026-04-22
DESCRIPTION | 12 ++-- MD5 | 28 +++++------ NEWS.md | 101 +++++++++++++++++++++++++++++----------- R/data.R | 12 +++- README.md | 126 +++++++++++++++++++++++++++++++++------------------ build/partial.rdb |binary build/vignette.rds |binary data/i2ds_survey.rda |binary inst/CITATION | 8 +-- inst/WORDLIST | 2 inst/doc/ds4psy.R | 21 +++++++- inst/doc/ds4psy.Rmd | 63 ++++++++++++++++++++----- inst/doc/ds4psy.html | 57 +++++++++++++++++------ man/i2ds_survey.Rd | 8 ++- vignettes/ds4psy.Rmd | 63 ++++++++++++++++++++----- 15 files changed, 359 insertions(+), 142 deletions(-)
Title: Compare Detrital Zircon Suites
Description: Compare detrital zircon suites by uploading univariate,
U-Pb age, or bivariate, U-Pb age and Lu-Hf data, in a 'shiny'-based
user-interface. Outputs publication quality figures using 'ggplot2', and
tables of statistics currently in use in the detrital zircon geochronology
community.
Author: Magnus Kristoffersen [aut, cre]
Maintainer: Magnus Kristoffersen <magnus.kristoffersen@geo.uio.no>
Diff between detzrcr versions 0.3.1 dated 2020-07-23 and 0.3.2 dated 2026-04-22
DESCRIPTION | 11 - MD5 | 22 +- NEWS.md | 4 R/calculations.R | 2 R/plotting.R | 155 ++++++++++--------- README.md | 4 build/vignette.rds |binary inst/CITATION | 25 +-- inst/doc/detzrcr-vignette.R | 18 +- inst/doc/detzrcr-vignette.Rmd | 8 - inst/doc/detzrcr-vignette.html | 321 +++++++++++++++++++++++------------------ vignettes/detzrcr-vignette.Rmd | 8 - 12 files changed, 317 insertions(+), 261 deletions(-)
Title: Simulate Package Installation and Attach
Description: Simulates the process of installing a package and then
attaching it. This is a key part of the 'devtools' package as it
allows you to rapidly iterate while developing a package.
Author: Hadley Wickham [aut],
Winston Chang [aut],
Jim Hester [aut],
Lionel Henry [aut, cre],
Posit Software, PBC [cph, fnd],
R Core team [ctb]
Maintainer: Lionel Henry <lionel@posit.co>
Diff between pkgload versions 1.5.1 dated 2026-04-01 and 1.5.2 dated 2026-04-22
DESCRIPTION | 6 +++--- MD5 | 8 ++++---- NEWS.md | 5 +++++ R/dev-topic.R | 21 ++++++++++----------- tests/testthat/test-help.R | 17 +++++++++++++++++ 5 files changed, 39 insertions(+), 18 deletions(-)
Title: 'NetCDF' Geometry and Time Series
Description: Tools to create time series and geometry 'NetCDF' files.
Author: David Blodgett [aut, cre],
Luke Winslow [ctb]
Maintainer: David Blodgett <dblodgett@usgs.gov>
Diff between ncdfgeom versions 1.1.6 dated 2024-01-25 and 1.2.2 dated 2026-04-22
ncdfgeom-1.1.6/ncdfgeom/inst/extdata/Yahara_alb.zip |only ncdfgeom-1.1.6/ncdfgeom/inst/extdata/hucDemo/hucPolygons.dbf |only ncdfgeom-1.1.6/ncdfgeom/inst/extdata/hucDemo/hucPolygons.prj |only ncdfgeom-1.1.6/ncdfgeom/inst/extdata/hucDemo/hucPolygons.shp |only ncdfgeom-1.1.6/ncdfgeom/inst/extdata/hucDemo/hucPolygons.shx |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/NHDLine/NHDLine.dbf |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/NHDLine/NHDLine.prj |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/NHDLine/NHDLine.shp |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/NHDLine/NHDLine.shx |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/Yahara_alb/Yahara_River_HRUs_alb_eq.dbf |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/Yahara_alb/Yahara_River_HRUs_alb_eq.prj |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/Yahara_alb/Yahara_River_HRUs_alb_eq.shp |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/Yahara_alb/Yahara_River_HRUs_alb_eq.shx |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/se_sites/se_sitest.dbf |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/se_sites/se_sitest.prj |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/se_sites/se_sitest.shp |only ncdfgeom-1.1.6/ncdfgeom/tests/testthat/data/se_sites/se_sitest.shx |only ncdfgeom-1.2.2/ncdfgeom/DESCRIPTION | 12 ncdfgeom-1.2.2/ncdfgeom/MD5 | 96 ++--- ncdfgeom-1.2.2/ncdfgeom/NAMESPACE | 2 ncdfgeom-1.2.2/ncdfgeom/NEWS.md | 14 ncdfgeom-1.2.2/ncdfgeom/R/calculate_area_intersection_weights.R | 170 +++++++--- ncdfgeom-1.2.2/ncdfgeom/R/create_cell_geometry.R | 12 ncdfgeom-1.2.2/ncdfgeom/R/read_attribute_data.R | 4 ncdfgeom-1.2.2/ncdfgeom/R/read_geometry.R | 8 ncdfgeom-1.2.2/ncdfgeom/R/read_timeseries_dsg.R | 4 ncdfgeom-1.2.2/ncdfgeom/R/write_attribute_data.R | 17 - ncdfgeom-1.2.2/ncdfgeom/R/write_geometry.R | 28 + ncdfgeom-1.2.2/ncdfgeom/R/write_point_dsg.R | 4 ncdfgeom-1.2.2/ncdfgeom/R/write_timeseries_dsg.R | 11 ncdfgeom-1.2.2/ncdfgeom/README.md | 7 ncdfgeom-1.2.2/ncdfgeom/build/vignette.rds |binary ncdfgeom-1.2.2/ncdfgeom/inst/WORDLIST |only ncdfgeom-1.2.2/ncdfgeom/inst/doc/geometry.R | 4 ncdfgeom-1.2.2/ncdfgeom/inst/doc/geometry.html | 7 ncdfgeom-1.2.2/ncdfgeom/inst/doc/ncdfgeom.R | 150 ++++---- ncdfgeom-1.2.2/ncdfgeom/inst/doc/ncdfgeom.Rmd | 4 ncdfgeom-1.2.2/ncdfgeom/inst/doc/ncdfgeom.html | 11 ncdfgeom-1.2.2/ncdfgeom/inst/doc/polygon_intersection.R |only ncdfgeom-1.2.2/ncdfgeom/inst/doc/polygon_intersection.Rmd |only ncdfgeom-1.2.2/ncdfgeom/inst/doc/polygon_intersection.html |only ncdfgeom-1.2.2/ncdfgeom/inst/doc/timeseries.html | 1 ncdfgeom-1.2.2/ncdfgeom/inst/extdata/gdptools_prl_out.csv |only ncdfgeom-1.2.2/ncdfgeom/man/calculate_area_intersection_weights.Rd | 109 ++++-- ncdfgeom-1.2.2/ncdfgeom/man/read_attribute_data.Rd | 2 ncdfgeom-1.2.2/ncdfgeom/man/read_geometry.Rd | 4 ncdfgeom-1.2.2/ncdfgeom/man/read_timeseries_dsg.Rd | 2 ncdfgeom-1.2.2/ncdfgeom/man/write_geometry.Rd | 2 ncdfgeom-1.2.2/ncdfgeom/man/write_timeseries_dsg.Rd | 6 ncdfgeom-1.2.2/ncdfgeom/tests/testthat/data/NHDLine/NHDLine.gpkg |only ncdfgeom-1.2.2/ncdfgeom/tests/testthat/data/Yahara_alb/Yahara_River_HRUs_alb_eq.gpkg |only ncdfgeom-1.2.2/ncdfgeom/tests/testthat/data/se_sites/se_sitest.gpkg |only ncdfgeom-1.2.2/ncdfgeom/tests/testthat/helper-functions.R | 3 ncdfgeom-1.2.2/ncdfgeom/tests/testthat/test_area_weighted.R | 167 +++++++++ ncdfgeom-1.2.2/ncdfgeom/tests/testthat/test_check_ncdf.R | 2 ncdfgeom-1.2.2/ncdfgeom/tests/testthat/test_create_cell_geometry.R | 4 ncdfgeom-1.2.2/ncdfgeom/tests/testthat/test_line.R | 2 ncdfgeom-1.2.2/ncdfgeom/tests/testthat/test_point.R | 2 ncdfgeom-1.2.2/ncdfgeom/tests/testthat/test_poly.R | 2 ncdfgeom-1.2.2/ncdfgeom/tests/testthat/test_read-write_attribute_data.R | 2 ncdfgeom-1.2.2/ncdfgeom/vignettes/ncdfgeom.Rmd | 4 ncdfgeom-1.2.2/ncdfgeom/vignettes/polygon_intersection.Rmd |only 62 files changed, 601 insertions(+), 278 deletions(-)
Title: Advanced Tables for Markdown/HTML
Description: Tables with state-of-the-art layout elements such as row spanners,
column spanners, table spanners, zebra striping, and more. While allowing
advanced layout, the underlying css-structure is simple in order to maximize
compatibility with common word processors. The package also contains a few
text formatting functions that help outputting text compatible with HTML/LaTeX.
Author: Max Gordon [aut, cre],
Stephen Gragg [aut],
Peter Konings [aut]
Maintainer: Max Gordon <max@gforge.se>
Diff between htmlTable versions 2.4.3 dated 2024-07-20 and 2.5.0 dated 2026-04-22
htmlTable-2.4.3/htmlTable/tests/testthat/structure.tex |only htmlTable-2.4.3/htmlTable/tests/visual_tests/word_test.html |only htmlTable-2.5.0/htmlTable/DESCRIPTION | 8 htmlTable-2.5.0/htmlTable/MD5 | 91 +-- htmlTable-2.5.0/htmlTable/NAMESPACE | 1 htmlTable-2.5.0/htmlTable/NEWS.md | 4 htmlTable-2.5.0/htmlTable/R/htmlTable.R | 22 htmlTable-2.5.0/htmlTable/R/htmlTable_helpers_getStyle.R | 3 htmlTable-2.5.0/htmlTable/R/htmlTable_helpers_prepareColors.R | 27 - htmlTable-2.5.0/htmlTable/R/htmlTable_render_addCells.R | 16 htmlTable-2.5.0/htmlTable/R/htmlTable_render_prAddEmptySpacerCell.R | 4 htmlTable-2.5.0/htmlTable/R/htmlTable_style_handlers.R | 192 +++++++ htmlTable-2.5.0/htmlTable/R/interactiveTable.R | 23 htmlTable-2.5.0/htmlTable/R/tidyHtmlTable.R | 55 +- htmlTable-2.5.0/htmlTable/R/tidyHtmlTable_helpers_bindDataListIntoColumns.r | 6 htmlTable-2.5.0/htmlTable/R/tidyHtmlTable_helpers_checkUniqueness.r | 2 htmlTable-2.5.0/htmlTable/R/tidyHtmlTable_helpers_extractElementsAndConvertToTbl.R | 4 htmlTable-2.5.0/htmlTable/R/tidyHtmlTable_helpers_getColTbl.R | 4 htmlTable-2.5.0/htmlTable/R/tidyHtmlTable_helpers_getRowTbl.r | 7 htmlTable-2.5.0/htmlTable/R/tidyHtmlTable_helpers_removeRowsWithNA.r | 11 htmlTable-2.5.0/htmlTable/R/txtFrmt_round.R | 7 htmlTable-2.5.0/htmlTable/R/txtFrmt_round_data.frame.R | 7 htmlTable-2.5.0/htmlTable/README.md | 125 +---- htmlTable-2.5.0/htmlTable/build/vignette.rds |binary htmlTable-2.5.0/htmlTable/inst/doc/complex_tables.Rmd | 2 htmlTable-2.5.0/htmlTable/inst/doc/complex_tables.html | 11 htmlTable-2.5.0/htmlTable/inst/doc/general.R | 72 +- htmlTable-2.5.0/htmlTable/inst/doc/general.Rmd | 79 +-- htmlTable-2.5.0/htmlTable/inst/doc/general.html | 246 ++++++---- htmlTable-2.5.0/htmlTable/inst/doc/text_formatters.html | 7 htmlTable-2.5.0/htmlTable/inst/doc/tidyHtmlTable.html | 7 htmlTable-2.5.0/htmlTable/inst/examples/concatHtmlTables_example.R | 45 - htmlTable-2.5.0/htmlTable/inst/examples/htmlTable_example.R | 92 +-- htmlTable-2.5.0/htmlTable/inst/examples/interactiveTable_example.R | 15 htmlTable-2.5.0/htmlTable/inst/examples/tidyHtmlTable_example.R | 31 - htmlTable-2.5.0/htmlTable/man/addStyles.Rd | 8 htmlTable-2.5.0/htmlTable/man/concatHtmlTables.Rd | 45 - htmlTable-2.5.0/htmlTable/man/getHtmlTableStyle.Rd | 6 htmlTable-2.5.0/htmlTable/man/hasHtmlTableStyle.Rd | 9 htmlTable-2.5.0/htmlTable/man/highlightRow.Rd |only htmlTable-2.5.0/htmlTable/man/htmlTable.Rd | 94 +-- htmlTable-2.5.0/htmlTable/man/interactiveTable.Rd | 19 htmlTable-2.5.0/htmlTable/man/prGetScriptString.Rd | 2 htmlTable-2.5.0/htmlTable/man/tidyHtmlTable.Rd | 33 - htmlTable-2.5.0/htmlTable/man/txtRound.Rd | 5 htmlTable-2.5.0/htmlTable/tests/testthat/test-api-compatibility.R |only htmlTable-2.5.0/htmlTable/tests/testthat/test-row_highlight.R |only htmlTable-2.5.0/htmlTable/vignettes/complex_tables.Rmd | 2 htmlTable-2.5.0/htmlTable/vignettes/general.Rmd | 79 +-- 49 files changed, 875 insertions(+), 653 deletions(-)