Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-07-29 0.5.2
2025-06-18 0.5.1
2025-04-28 0.5.0
2025-03-05 0.4.0
Title: A Data Analysis GUI for R
Description: An intuitive, cross-platform graphical data analysis system. It uses menus and dialogs to guide the user efficiently through the data manipulation and analysis process, and has an excel like spreadsheet for easy data frame visualization and editing. Deducer works best when used with the Java based R GUI JGR, but the dialogs can be called from the command line. Dialogs have also been integrated into the Windows Rgui.
Author: Ian Fellows [aut, cre]
Maintainer: Ian Fellows <ian@fellstat.com>
Diff between Deducer versions 0.9-1 dated 2025-10-02 and 0.9-2 dated 2026-05-06
DESCRIPTION | 10 ++-- MD5 | 14 +++--- NEWS | 9 +++ R/zzz.R | 113 ++++++++++++++++++++++++++++++++++++++----------- inst/java/deducer.jar |binary java/org/deducer.jar |binary man/Helpers.Rd | 3 + man/deducer.addmenu.Rd | 6 +- 8 files changed, 116 insertions(+), 39 deletions(-)
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Title: Mediterranean Landscape Simulation
Description: Simulate forest hydrology, forest function and dynamics over landscapes [De Caceres et al. (2015) <doi:10.1016/j.agrformet.2015.06.012>]. Parallelization is allowed in several simulation functions and simulations may be conducted including spatial processes such as lateral water transfer and seed dispersal.
Author: Miquel De Caceres [aut, cre],
Aitor Ameztegui [aut] ,
Maria Gonzalez [aut] ,
Nuria Aquilue [aut],
Daniel Caviedes-Voullieme [aut],
Mario Morales-Hernandez [aut],
Mario Beltran [ctb],
Rodrigo Balaguer-Romano [ctb] ,
Roberto Molowny-Horas [ctb]
Maintainer: Miquel De Caceres <miquelcaceres@gmail.com>
Diff between medfateland versions 2.8.1 dated 2025-10-22 and 3.0.0 dated 2026-05-06
DESCRIPTION | 16 MD5 | 72 +- NAMESPACE | 3 R/RcppExports.R | 20 R/add_soilgrids.R | 176 ++--- R/initialize_landscape.R | 34 R/medfateland-package.R | 1 R/model_land.R | 186 +++-- R/model_land_utils.R | 22 R/model_spatial_day.R | 58 + R/plot_summary.R | 45 + R/simulation_summary.R | 4 R/sysdata.rda |binary man/plot_summary.Rd | 10 man/simulation_summary.Rd | 4 man/soil_parametrization.Rd | 21 man/spwb_land.Rd | 2 man/spwb_land_day.Rd | 12 man/unnest_summary.Rd |only src/RcppExports.cpp | 98 -- src/fireutils.cpp | 2 src/fireutils.h | 2 src/serghei.cpp | 2 src/serghei.h | 2 src/spwbland.cpp | 196 ++--- src/spwbland.h | 2 src/tetis.cpp | 833 +++++++++++------------- src/tetis_channel.cpp | 2 src/tetis_channel.h | 2 tests/testthat/initialized_objects |only tests/testthat/test_land.R | 9 tests/testthat/test_old_version_input_objects.R |only tests/testthat/test_spatial.R | 1 tests/testthat/test_spatial_day.R | 25 34 files changed, 932 insertions(+), 930 deletions(-)
Title: Online Changepoint Detection in Univariate and Multivariate Data
Streams
Description: Provides high-performance online changepoint detection in univariate and multivariate data
streams. Implements efficient 'C++' backends for the 'focus', 'md-focus' and 'np-focus'
algorithms, with an 'R' interface for real-time monitoring and offline analysis.
The package bundles code from 'Qhull' <http://www.qhull.org/>, by C. B. Barber and
The Geometry Center. See 'inst/COPYRIGHTS' for details.
Author: Gaetano Romano [aut, cre, trl],
Kes Ward [aut],
Yuntang Fan [aut],
Guillem Rigaill [aut],
Vincent Runge [aut],
Paul Fearnhead [aut],
Idris A. Eckley [aut],
C. B. Barber [ctb, cph] ,
The Geometry Center [cph]
Maintainer: Gaetano Romano <g.romano@lancaster.ac.uk>
Diff between focus versions 0.1.3 dated 2026-03-31 and 0.1.5 dated 2026-05-06
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- src/ARpInfo.h | 42 ++++++++++++++++++++++++++---------------- src/focus_rcpp_module.cpp | 20 ++++++++++++++++---- 4 files changed, 49 insertions(+), 27 deletions(-)
Title: Explore 'Wikidata' Through Tidy Data Frames
Description: Query 'Wikidata' API <https://www.wikidata.org/wiki/Wikidata:Main_Page> with ease, get tidy data frames in response, and cache data in a local database.
Author: Giorgio Comai [aut, cre, cph] ,
EDJNet [fnd]
Maintainer: Giorgio Comai <giorgio.comai@cci.tn.it>
Diff between tidywikidatar versions 0.6.1 dated 2026-02-09 and 0.6.2 dated 2026-05-06
DESCRIPTION | 8 - MD5 | 122 +++++++++++------------ NEWS.md | 5 R/tw_check.R | 6 - R/tw_extract.R | 22 ++-- R/tw_filter.R | 19 ++- R/tw_get.R | 47 ++++++-- R/tw_get_cached_search.R | 4 R/tw_get_field.R | 7 + R/tw_get_image.R | 48 ++++++--- R/tw_get_item.R | 12 +- R/tw_get_others.R | 39 +++++-- R/tw_get_property.R | 36 ++++-- R/tw_get_property_description.R | 6 - R/tw_get_property_label.R | 4 R/tw_get_property_with_details.R | 41 +++++-- R/tw_get_qualifiers.R | 37 +++++- R/tw_get_wikipedia_page_section_links.R | 6 - R/tw_search.R | 50 ++++++++- R/tw_write_search_to_cache.R | 3 build/vignette.rds |binary man/tw_check_search.Rd | 6 - man/tw_create_cache_folder.Rd | 4 man/tw_extract_qualifier.Rd | 28 ++++- man/tw_filter.Rd | 2 man/tw_filter_first.Rd | 2 man/tw_filter_people.Rd | 8 - man/tw_get.Rd | 8 + man/tw_get_cached_search.Rd | 4 man/tw_get_description.Rd | 20 +++ man/tw_get_field.Rd | 7 + man/tw_get_image.Rd | 18 ++- man/tw_get_image_metadata.Rd | 20 +++ man/tw_get_image_metadata_single.Rd | 14 ++ man/tw_get_image_same_length.Rd | 24 +++- man/tw_get_item.Rd | 9 + man/tw_get_label.Rd | 19 ++- man/tw_get_p1.Rd | 18 +++ man/tw_get_property.Rd | 16 ++- man/tw_get_property_description.Rd | 4 man/tw_get_property_description_single.Rd | 2 man/tw_get_property_label_single.Rd | 4 man/tw_get_property_same_length.Rd | 20 +++ man/tw_get_property_with_details.Rd | 18 +++ man/tw_get_property_with_details_single.Rd | 21 +++ man/tw_get_qualifiers.Rd | 12 ++ man/tw_get_qualifiers_single.Rd | 12 ++ man/tw_get_single.Rd | 8 + man/tw_get_wikipedia.Rd | 20 +++ man/tw_get_wikipedia_section_links_api_url.Rd | 6 - man/tw_reset_item_cache.Rd | 8 - man/tw_reset_qualifiers_cache.Rd | 4 man/tw_reset_wikipedia_category_members_cache.Rd | 4 man/tw_reset_wikipedia_page_cache.Rd | 4 man/tw_reset_wikipedia_page_links_cache.Rd | 4 man/tw_reset_wikipedia_page_sections_cache.Rd | 4 man/tw_search.Rd | 8 + man/tw_search_item.Rd | 4 man/tw_search_single.Rd | 14 ++ man/tw_write_qualifiers_to_cache.Rd | 3 man/tw_write_search_to_cache.Rd | 3 tests/testthat/test-get_image.R | 15 ++ 62 files changed, 713 insertions(+), 238 deletions(-)
Title: Access the Open Experience Sampling Method Database
Description: Provides programmatic access to the Open Experience Sampling Method ('openESM') database (<https://openesmdata.org>),
a collection of harmonized experience sampling datasets. The package enables researchers to discover, download,
and work with the datasets while ensuring proper citation and license compliance.
Author: Bjoern S. Siepe [aut, cre, cph] ,
Matthias Kloft [aut]
Maintainer: Bjoern S. Siepe <bjoernsiepe@gmail.com>
Diff between openesm versions 0.1.2 dated 2025-12-03 and 0.2.0 dated 2026-05-06
DESCRIPTION | 6 +- MD5 | 14 +++--- NAMESPACE | 2 NEWS.md | 63 +++++++++++++++++------------ R/get_dataset.R | 81 ++++++++++++++++++++++++++++---------- R/zenodo.R | 66 ++++++------------------------ tests/testthat/test-get_dataset.R | 16 ++++++- tests/testthat/test-zenodo.R | 37 ++++++++++------- 8 files changed, 159 insertions(+), 126 deletions(-)
Title: Simulate Discrete Character Data along Phylogenetic Trees
Description: Tools to simulate morphological traits along phylogenetic trees
with branch lengths representing evolutionary distance or time.
Includes functions for visualizing evolutionary processes along trees
and within morphological character matrices.
Author: Laura Mulvey [aut, cre, cph],
Tim Brandler [aut, cph],
Alessio Capobianco [aut, cph],
Rachel Warnock [aut, cph],
Joelle Barido-Sottani [aut, cph]
Maintainer: Laura Mulvey <lauramulvey479@gmail.com>
Diff between MorphSim versions 0.1.0 dated 2026-01-12 and 1.2.0 dated 2026-05-06
DESCRIPTION | 10 +- MD5 | 49 ++++++++----- NAMESPACE | 14 +++ R/morpho.R | 5 + R/plot.morpho.R | 62 ++++++++++++++-- R/plotMorphoGrid.R | 2 R/reconstruct.tree.R | 2 R/sim.missing.data.R | 127 ++++++++++++++------------------- R/sim.morpho.R | 157 +++++++++++++++++++++++++++++++++-------- R/summary.r | 176 +++++++++++++++++++++++++++++++++++++++++++++-- R/write.r | 57 +++++++++++++++ README.md | 52 +++++++++++-- build |only inst/doc |only man/convergent_evol.Rd | 9 ++ man/find_path_to_tip.Rd | 4 - man/get.convergent.Rd |only man/get.matrix.Rd |only man/get.reconstructed.Rd | 7 + man/get.transitions.Rd |only man/morpho.Rd | 6 + man/plot.morpho.Rd | 16 ++-- man/sim.missing.data.Rd | 37 ++++++--- man/sim.morpho.Rd | 112 ++++++++++++++++++++++------- man/stats.morpho.Rd | 5 + man/write.morpho.Rd |only tests |only vignettes |only 28 files changed, 703 insertions(+), 206 deletions(-)
Title: Entropy Partitioning to Measure Diversity
Description: Measurement and partitioning of diversity, based on Tsallis entropy, following Marcon and Herault (2015) <doi:10.18637/jss.v067.i08>.
'divent' provides functions to estimate alpha, beta and gamma diversity of communities, including phylogenetic and functional diversity.
Author: Eric Marcon [aut, cre] ,
Florence Puech [aut]
Maintainer: Eric Marcon <eric.marcon@agroparistech.fr>
Diff between divent versions 0.5-3 dated 2025-08-27 and 0.5-4 dated 2026-05-06
DESCRIPTION | 14 - MD5 | 82 +++---- NEWS.md | 26 +- R/accum_sp_hill.R | 3 R/coverage.R | 39 ++- R/div_gen_simpson.R | 1 R/div_hill.R | 2 R/div_hurlbert.R | 1 R/div_richness.R | 28 +- R/ent_phylo.R | 2 R/ent_similarity.R | 2 R/ent_tsallis.R | 2 R/metacommunity.R | 2 R/package.R | 5 build/partial.rdb |binary build/vignette.rds |binary inst/REFERENCES.bib | 414 +++++++++++++++++++++++++++++++++------ inst/doc/divent.R | 6 inst/doc/divent.Rmd | 39 +-- inst/doc/divent.html | 38 +-- man/accum_div_phylo.Rd | 2 man/alphahull.Rd | 86 ++++---- man/autoplot.wmppp.Rd | 4 man/check_divent_args.Rd | 2 man/coverage.Rd | 1 man/div_gen_simpson.Rd | 142 ++++++------- man/div_pd.Rd | 2 man/div_phylo.Rd | 2 man/divent-package.Rd | 1 man/ent_allen.Rd | 2 man/ent_gen_simpson.Rd | 168 +++++++-------- man/ent_phylo.Rd | 2 man/ent_rao.Rd | 2 man/mock_3sp.Rd | 2 man/non_species_columns.Rd | 5 man/paracou_6_taxo.Rd | 2 man/phylo_divent.Rd | 4 man/plot.phylo_divent.Rd | 2 man/plot.species_distribution.Rd | 2 man/profile_phylo.Rd | 2 man/reexports.Rd | 2 vignettes/divent.Rmd | 39 +-- 42 files changed, 746 insertions(+), 436 deletions(-)
Title: A C++11 Interface for R's C Interface
Description: Provides a header only, C++11 interface to R's C
interface. Compared to other approaches 'cpp11' strives to be safe
against long jumps from the C API as well as C++ exceptions, conform
to normal R function semantics and supports interaction with 'ALTREP'
vectors.
Author: Davis Vaughan [aut, cre] ,
Jim Hester [aut] ,
Romain Francois [aut] ,
Benjamin Kietzman [ctb],
Posit Software, PBC [cph, fnd]
Maintainer: Davis Vaughan <davis@posit.co>
Diff between cpp11 versions 0.5.4 dated 2026-04-04 and 0.5.5 dated 2026-05-06
DESCRIPTION | 6 - MD5 | 42 ++++++------- NEWS.md | 6 + R/source.R | 65 +++++++++++++++----- README.md | 2 inst/doc/FAQ.Rmd | 2 inst/doc/FAQ.html | 10 +-- inst/doc/cpp11.R | 32 ++++++---- inst/doc/cpp11.Rmd | 44 ++++++++----- inst/doc/cpp11.html | 130 ++++++++++++++++++++++------------------- inst/doc/internals.Rmd | 2 inst/doc/internals.html | 2 inst/doc/motivations.Rmd | 14 ++-- inst/doc/motivations.html | 16 ++--- inst/include/cpp11/protect.hpp | 74 ++++++++++++++++++----- man/cpp_source.Rd | 4 - tests/testthat/fixtures |only tests/testthat/test-source.R | 14 ++++ vignettes/FAQ.Rmd | 2 vignettes/cpp11.Rmd | 44 ++++++++----- vignettes/internals.Rmd | 2 vignettes/motivations.Rmd | 14 ++-- 22 files changed, 333 insertions(+), 194 deletions(-)
Title: Blinded Sample Size Recalculation
Description: Computation of key characteristics and plots for blinded sample size recalculation.
Continuous as well as binary endpoints are supported in superiority and non-inferiority trials.
See Baumann, Pilz, Kieser (2022) <doi:10.32614/RJ-2022-001> for a detailed description.
The implemented methods include the approaches by
Lu, K. (2016) <doi:10.1002/pst.1737>,
Kieser, M. and Friede, T. (2000) <doi:10.1002/(SICI)1097-0258(20000415)19:7%3C901::AID-SIM405%3E3.0.CO;2-L>,
Friede, T. and Kieser, M. (2004) <doi:10.1002/pst.140>,
Friede, T., Mitchell, C., Mueller-Veltern, G. (2007) <doi:10.1002/bimj.200610373>, and
Friede, T. and Kieser, M. (2011) <doi:10.3414/ME09-01-0063>.
Author: Lukas Baumann [aut, cre] ,
Maximilian Pilz [aut] ,
Institute of Medical Biometry - University of Heidelberg [cph]
Maintainer: Lukas Baumann <baumann@imbi.uni-heidelberg.de>
Diff between blindrecalc versions 1.1.0 dated 2025-06-17 and 1.1.1 dated 2026-05-06
DESCRIPTION | 11 ++++++----- MD5 | 18 +++++++++--------- NEWS.md | 4 ++++ R/Student.R | 23 ++++++++++++++++++----- R/test_statistics.R | 6 +++--- README.md | 19 ++++++++++--------- build/vignette.rds |binary man/Student.Rd | 6 +++--- man/simulation.Rd | 8 ++++---- tests/testthat/test_t_test.R | 12 +++++++++++- 10 files changed, 68 insertions(+), 39 deletions(-)
Title: Sequential Probability Ratio Tests Toolbox
Description: A toolbox for Sequential Probability Ratio Tests (SPRT) based on
Wald (1945) <doi:10.2134/agronj1947.00021962003900070011x>.
SPRTs are applied during the sampling process, ideally after each
observation, and at every stage return a decision to either continue
sampling or terminate and accept one of the specified hypotheses.
The `seq_ttest()` function performs one-sample, two-sample, and paired
t-tests for one- and two-sided hypotheses (Schnuerch & Erdfelder (2019)
<doi:10.1037/met0000234>). The `seq_anova()` function performs a sequential
one-way fixed effects ANOVA (Steinhilber et al. (2024)
<doi:10.1037/met0000677>). The `plan_sample_size()` function helps plan
sequential studies by simulating required sample sizes across a range of
effect sizes. For more information, see the vignettes
browseVignettes(package = "sprtt") or the package website
<https://meikesteinhilber.github.io/sprtt/>.
Author: Meike Snijder-Steinhilber [aut, cre] ,
Martin Schnuerch [aut, ths] ,
Anna-Lena Schubert [aut, ths]
Maintainer: Meike Snijder-Steinhilber <Meike.Steinhilber@aol.com>
Diff between sprtt versions 0.2.0 dated 2023-07-06 and 0.3.1 dated 2026-05-06
sprtt-0.2.0/sprtt/inst/doc/sprts.Rmd |only sprtt-0.2.0/sprtt/inst/doc/sprts.html |only sprtt-0.2.0/sprtt/inst/doc/usage_sprtt.R |only sprtt-0.2.0/sprtt/inst/doc/usage_sprtt.Rmd |only sprtt-0.2.0/sprtt/inst/doc/usage_sprtt.html |only sprtt-0.2.0/sprtt/tests/testthat/_snaps/calc_plot_sprt |only sprtt-0.2.0/sprtt/vignettes/sprts.Rmd |only sprtt-0.2.0/sprtt/vignettes/usage_sprtt.Rmd |only sprtt-0.3.1/sprtt/DESCRIPTION | 53 sprtt-0.3.1/sprtt/MD5 | 203 sprtt-0.3.1/sprtt/NAMESPACE | 11 sprtt-0.3.1/sprtt/NEWS.md | 32 sprtt-0.3.1/sprtt/R/CLASS_seq_anova_arguments.R | 6 sprtt-0.3.1/sprtt/R/calc_plot_sprt.R | 22 sprtt-0.3.1/sprtt/R/draw_sample_mixture.R | 3 sprtt-0.3.1/sprtt/R/draw_sample_normal.R | 1 sprtt-0.3.1/sprtt/R/load_data_external.R |only sprtt-0.3.1/sprtt/R/plan_sample_size.R |only sprtt-0.3.1/sprtt/R/plot_sprt.R | 130 sprtt-0.3.1/sprtt/R/seq_anova.R | 76 sprtt-0.3.1/sprtt/R/seq_ttest.R | 45 sprtt-0.3.1/sprtt/R/zzz.R |only sprtt-0.3.1/sprtt/README.md | 125 sprtt-0.3.1/sprtt/build/partial.rdb |binary sprtt-0.3.1/sprtt/build/vignette.rds |binary sprtt-0.3.1/sprtt/data/df_cancer.rda |binary sprtt-0.3.1/sprtt/data/df_income.rda |binary sprtt-0.3.1/sprtt/data/df_stress.rda |binary sprtt-0.3.1/sprtt/inst/doc/developer_guide.R |only sprtt-0.3.1/sprtt/inst/doc/developer_guide.Rmd |only sprtt-0.3.1/sprtt/inst/doc/developer_guide.html |only sprtt-0.3.1/sprtt/inst/doc/one_way_anova.R | 118 sprtt-0.3.1/sprtt/inst/doc/one_way_anova.Rmd | 290 sprtt-0.3.1/sprtt/inst/doc/one_way_anova.html | 599 - 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Title: Quality Control for Label-Free Proteomics Expression Data
Description: Label-free bottom-up proteomics expression data is often affected by data heterogeneity and missing values. Normalization and missing value imputation are commonly used techniques to address these issues and make the dataset suitable for further downstream analysis. This package provides an optimal combination of normalization and imputation methods for the dataset. The package utilizes three normalization methods and three imputation methods.The statistical evaluation measures named pooled co-efficient of variance, pooled estimate of variance and pooled median absolute deviation are used for selecting the best combination of normalization and imputation method for the given dataset. The user can also visualize the results by using various plots available in this package. The user can also perform the differential expression analysis between two sample groups with the function included in this package. The chosen three normalization methods, three imputation methods and three evaluati [...truncated...]
Author: Kabilan S [aut, cre],
Dr Shashi Bhushan Lal [aut, ths],
Dr Sudhir Srivastava [aut, ths],
Dr Krishna Kumar Chaturvedi [ths],
Dr Yasin Jeshima K [ths],
Dr Ramasubramanian V [ths],
Dr Dwijesh Chandra Mishra [ths],
Dr Girish Kumar Jha [ctb],
Dr Sharanbas [...truncated...]
Maintainer: Kabilan S <kabilan151414@gmail.com>
Diff between lfproQC versions 1.4.2 dated 2026-05-01 and 1.4.3 dated 2026-05-06
DESCRIPTION | 9 +++++---- MD5 | 8 ++++---- NEWS | 5 +++++ inst/doc/user_guide.html | 2 +- man/lfproQC-package.Rd | 1 + 5 files changed, 16 insertions(+), 9 deletions(-)
Title: Simple Features for R
Description: Support for simple feature access, a standardized way to
encode and analyze spatial vector data. Binds to 'GDAL'
<doi:10.5281/zenodo.5884351> for reading and writing data, to 'GEOS'
<doi:10.5281/zenodo.11396894> for geometrical operations,
and to 'PROJ' <doi:10.5281/zenodo.5884394> for projection
conversions and datum transformations. Uses by default the 's2'
package for geometry operations on geodetic (long/lat degree)
coordinates.
Author: Edzer Pebesma [aut, cre] ,
Roger Bivand [ctb] ,
Etienne Racine [ctb],
Michael Sumner [ctb],
Ian Cook [ctb],
Tim Keitt [ctb],
Robin Lovelace [ctb],
Hadley Wickham [ctb],
Jeroen Ooms [ctb] ,
Kirill Mueller [ctb],
Thomas Lin Pedersen [ctb],
Dan Baston [c [...truncated...]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between sf versions 1.1-0 dated 2026-02-24 and 1.1-1 dated 2026-05-06
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Title: Random Fields on Metric Graphs
Description: Facilitates creation and manipulation of metric graphs, such as street or river networks. Further facilitates operations and visualizations of data on metric graphs, and the creation of a large class of random fields and stochastic partial differential equations on such spaces. These random fields can be used for simulation, prediction and inference. In particular, linear mixed effects models including random field components can be fitted to data based on computationally efficient sparse matrix representations. Interfaces to the R packages 'INLA' and 'inlabru' are also provided, which facilitate working with Bayesian statistical models on metric graphs. The main references for the methods are Bolin, Simas and Wallin (2024) <doi:10.3150/23-BEJ1647>, Bolin, Kovacs, Kumar and Simas (2023) <doi:10.1090/mcom/3929> and Bolin, Simas and Wallin (2023) <doi:10.48550/arXiv.2304.03190> and <doi:10.48550/arXiv.2304.10372>.
Author: David Bolin [cre, aut],
Alexandre Simas [aut],
Jonas Wallin [aut]
Maintainer: David Bolin <davidbolin@gmail.com>
Diff between MetricGraph versions 1.5.0 dated 2025-05-19 and 1.6.0 dated 2026-05-06
MetricGraph-1.5.0/MetricGraph/tests/testthat/test.alpha2.R |only MetricGraph-1.5.0/MetricGraph/tests/testthat/test.alpha2.constraints.R |only MetricGraph-1.5.0/MetricGraph/tests/testthat/test_crossval.R |only MetricGraph-1.5.0/MetricGraph/tests/testthat/test_directional.R |only MetricGraph-1.5.0/MetricGraph/tests/testthat/test_exp.R |only MetricGraph-1.5.0/MetricGraph/tests/testthat/test_isoExp.R |only MetricGraph-1.5.0/MetricGraph/tests/testthat/test_precomputed_likelihood.R |only MetricGraph-1.5.0/MetricGraph/tests/testthat/test_split_line.R |only MetricGraph-1.6.0/MetricGraph/DESCRIPTION | 23 MetricGraph-1.6.0/MetricGraph/MD5 | 90 MetricGraph-1.6.0/MetricGraph/NAMESPACE | 23 MetricGraph-1.6.0/MetricGraph/NEWS.md | 25 MetricGraph-1.6.0/MetricGraph/R/MetricGraph-package.R | 10 MetricGraph-1.6.0/MetricGraph/R/RcppExports.R | 194 MetricGraph-1.6.0/MetricGraph/R/graph_components.R |only MetricGraph-1.6.0/MetricGraph/R/graph_crossval.R |only MetricGraph-1.6.0/MetricGraph/R/graph_inference.R | 280 MetricGraph-1.6.0/MetricGraph/R/graph_lgcp.R | 759 MetricGraph-1.6.0/MetricGraph/R/graph_likelihoods.R | 545 MetricGraph-1.6.0/MetricGraph/R/graph_lme.R | 72 MetricGraph-1.6.0/MetricGraph/R/graph_spde.R | 2005 - MetricGraph-1.6.0/MetricGraph/R/metric_graph.R |17217 +++++----- MetricGraph-1.6.0/MetricGraph/R/profile.R | 1 MetricGraph-1.6.0/MetricGraph/R/space_time.R | 59 MetricGraph-1.6.0/MetricGraph/R/spde_covariance.R | 89 MetricGraph-1.6.0/MetricGraph/R/spde_posteriors.R | 189 MetricGraph-1.6.0/MetricGraph/R/spde_precision.R | 143 MetricGraph-1.6.0/MetricGraph/R/spde_sampling.R | 248 MetricGraph-1.6.0/MetricGraph/R/util.R | 449 MetricGraph-1.6.0/MetricGraph/build/vignette.rds |binary MetricGraph-1.6.0/MetricGraph/inst/doc/MetricGraph_pkg.html | 4 MetricGraph-1.6.0/MetricGraph/man/MetricGraph-package.Rd | 1 MetricGraph-1.6.0/MetricGraph/man/augment.graph_lme.Rd | 2 MetricGraph-1.6.0/MetricGraph/man/bru_mapper.inla_metric_graph_spde.Rd | 8 MetricGraph-1.6.0/MetricGraph/man/cross_validation.Rd |only MetricGraph-1.6.0/MetricGraph/man/glance.graph_lme.Rd | 4 MetricGraph-1.6.0/MetricGraph/man/graph_components.Rd | 646 MetricGraph-1.6.0/MetricGraph/man/graph_lgcp_sim.Rd | 83 MetricGraph-1.6.0/MetricGraph/man/graph_spde.Rd | 59 MetricGraph-1.6.0/MetricGraph/man/lgcp_graph.Rd | 156 MetricGraph-1.6.0/MetricGraph/man/match_mesh_data.Rd |only MetricGraph-1.6.0/MetricGraph/man/metric_graph.Rd | 3540 +- MetricGraph-1.6.0/MetricGraph/man/posterior_crossvalidation_loo.Rd |only MetricGraph-1.6.0/MetricGraph/man/precompute_lgcp_graph.Rd |only MetricGraph-1.6.0/MetricGraph/man/predict.inla_metric_graph_spde.Rd | 2 MetricGraph-1.6.0/MetricGraph/man/predict.rspde_metric_graph.Rd | 2 MetricGraph-1.6.0/MetricGraph/man/update_graph.Rd |only MetricGraph-1.6.0/MetricGraph/src/CB.cpp | 494 MetricGraph-1.6.0/MetricGraph/src/CB_revisited.cpp |only MetricGraph-1.6.0/MetricGraph/src/RcppExports.cpp | 221 MetricGraph-1.6.0/MetricGraph/src/aux_functions.cpp | 252 MetricGraph-1.6.0/MetricGraph/src/metric_graph_helpers.cpp |only MetricGraph-1.6.0/MetricGraph/tests/testthat/helper-metric-graph.R |only MetricGraph-1.6.0/MetricGraph/tests/testthat/test-metric-graph-components.R |only MetricGraph-1.6.0/MetricGraph/tests/testthat/test-metric-graph-constructor.R |only MetricGraph-1.6.0/MetricGraph/tests/testthat/test-prune-vertices.R |only MetricGraph-1.6.0/MetricGraph/tests/testthat/test-set-edge-weights.R |only 57 files changed, 16837 insertions(+), 11058 deletions(-)
Title: Mediterranean Forest Simulation
Description: Simulate Mediterranean forest functioning and dynamics using cohort-based description of vegetation [De Caceres et al. (2015) <doi:10.1016/j.agrformet.2015.06.012>; De Caceres et al. (2021) <doi:10.1016/j.agrformet.2020.108233>].
Author: Miquel De Caceres [aut, cre, cph] ,
Nicolas Martin-StPaul [aut] ,
Victor Granda [aut] ,
Antoine Cabon [aut] ,
Arsene Druel [aut] ,
Julien Ruffault [aut] ,
Jordi Martinez-Vilalta [ctb] ,
Maurizio Mencuccini [ctb] ,
Francois Pimont [ctb] ,
Herve Cochar [...truncated...]
Maintainer: Miquel De Caceres <miquelcaceres@gmail.com>
Diff between medfate versions 4.8.4 dated 2025-10-21 and 5.0.0 dated 2026-05-06
medfate-4.8.4/medfate/R/soil_retentionCurvePlot.R |only medfate-4.8.4/medfate/src/aspwb.h |only medfate-4.8.4/medfate/src/fireseverity.cpp |only medfate-4.8.4/medfate/src/fireseverity.h |only medfate-4.8.4/medfate/src/growth.h |only medfate-4.8.4/medfate/src/incbeta.cpp |only medfate-4.8.4/medfate/src/incbeta.h |only medfate-4.8.4/medfate/src/incgamma.cpp |only medfate-4.8.4/medfate/src/incgamma.h |only medfate-4.8.4/medfate/src/phenology.h |only medfate-4.8.4/medfate/src/spwb_day.h |only medfate-4.8.4/medfate/src/struct_photosynthesis.h |only medfate-4.8.4/medfate/src/struct_sureau.h |only medfate-4.8.4/medfate/src/transpiration.h |only medfate-4.8.4/medfate/src/windextinction.cpp |only medfate-4.8.4/medfate/src/windextinction.h |only medfate-5.0.0/medfate/DESCRIPTION | 19 medfate-5.0.0/medfate/MD5 | 387 - medfate-5.0.0/medfate/NAMESPACE | 7 medfate-5.0.0/medfate/R/MedfateRunner.R |only medfate-5.0.0/medfate/R/RcppExports.R | 1867 +++-- medfate-5.0.0/medfate/R/VerticalProfiles.R | 31 medfate-5.0.0/medfate/R/dataset_documentation.R | 99 medfate-5.0.0/medfate/R/defaultControl.R | 53 medfate-5.0.0/medfate/R/defaultSoilParams.R | 8 medfate-5.0.0/medfate/R/emptyforest.R | 118 medfate-5.0.0/medfate/R/extract.R | 314 medfate-5.0.0/medfate/R/fordyn.R | 96 medfate-5.0.0/medfate/R/fordynutils.R | 290 medfate-5.0.0/medfate/R/forest_mapWoodyTables.R | 16 medfate-5.0.0/medfate/R/forest_mergeTrees.R | 268 medfate-5.0.0/medfate/R/plot.forest.R | 5 medfate-5.0.0/medfate/R/plot.soil.R |only medfate-5.0.0/medfate/R/plot.spwb.R | 13 medfate-5.0.0/medfate/R/plot_internals.R | 33 medfate-5.0.0/medfate/R/regeneration.R | 329 medfate-5.0.0/medfate/R/soil_redefineLayers.R | 9 medfate-5.0.0/medfate/R/stand_metrics.R | 19 medfate-5.0.0/medfate/R/summary.forest.R | 84 medfate-5.0.0/medfate/R/summary.soil.R | 11 medfate-5.0.0/medfate/R/summary.spwb.R | 2 medfate-5.0.0/medfate/R/transp_stomatalRegulationPlot.R | 226 medfate-5.0.0/medfate/R/welcome.R | 2 medfate-5.0.0/medfate/build/partial.rdb |binary medfate-5.0.0/medfate/data/SpParamsDefinition.rda |binary medfate-5.0.0/medfate/data/SpParamsMED.rda |binary medfate-5.0.0/medfate/data/exampleforest.rda |binary medfate-5.0.0/medfate/data/exampleforest2.rda |binary medfate-5.0.0/medfate/data/exampleobs.rda |binary medfate-5.0.0/medfate/data/poblet_trees.rda |binary medfate-5.0.0/medfate/inst/include/medfate_RcppExports.h | 529 - 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Title: APSIM Next Generation
Description: The Agricultural Production Systems sIMulator ('APSIM') is a widely
used to simulate the agricultural systems for multiple crops. This package
is designed to create, modify and run 'apsimx' files in the 'APSIM' Next
Generation <https://www.apsim.info/>.
Author: Bangyou Zheng [aut, cre]
Maintainer: Bangyou Zheng <zheng.bangyou@gmail.com>
Diff between rapsimng versions 0.4.6 dated 2026-02-09 and 0.5.0 dated 2026-05-06
rapsimng-0.4.6/rapsimng/inst/extdata/Models.Rds |only rapsimng-0.4.6/rapsimng/man/available_models.Rd |only rapsimng-0.5.0/rapsimng/DESCRIPTION | 11 rapsimng-0.5.0/rapsimng/MD5 | 42 - rapsimng-0.5.0/rapsimng/NAMESPACE | 15 rapsimng-0.5.0/rapsimng/R/experiment.R |only rapsimng-0.5.0/rapsimng/R/model_frost_heat_damage.R |only rapsimng-0.5.0/rapsimng/R/models.R | 129 ++--- rapsimng-0.5.0/rapsimng/R/search.R | 2 rapsimng-0.5.0/rapsimng/README.md | 1 rapsimng-0.5.0/rapsimng/build/vignette.rds |binary rapsimng-0.5.0/rapsimng/inst/doc/modify.R | 3 rapsimng-0.5.0/rapsimng/inst/doc/modify.Rmd | 255 ++++------ rapsimng-0.5.0/rapsimng/inst/doc/modify.html | 68 -- rapsimng-0.5.0/rapsimng/inst/doc/sensitivity.Rmd | 142 ++--- rapsimng-0.5.0/rapsimng/man/frost_heat_damage.Rd |only rapsimng-0.5.0/rapsimng/man/get_experiment.Rd |only rapsimng-0.5.0/rapsimng/man/get_pawc.Rd | 60 +- rapsimng-0.5.0/rapsimng/man/new_cultivar.Rd | 56 +- rapsimng-0.5.0/rapsimng/man/search_path.Rd | 4 rapsimng-0.5.0/rapsimng/man/with_apsimx.Rd | 28 - rapsimng-0.5.0/rapsimng/tests/testthat/test-experiment.R |only rapsimng-0.5.0/rapsimng/tests/testthat/test-frost-heat-damage.R |only rapsimng-0.5.0/rapsimng/tests/testthat/test-simulations.R | 120 ++-- rapsimng-0.5.0/rapsimng/vignettes/modify.Rmd | 255 ++++------ rapsimng-0.5.0/rapsimng/vignettes/sensitivity.Rmd | 142 ++--- 26 files changed, 650 insertions(+), 683 deletions(-)
Title: Extract from the Scottish Health and Social Care Open Data
Platform
Description: Extract and interact with data from the Scottish Health and
Social Care Open Data platform <https://www.opendata.nhs.scot>.
Author: Public Health Scotland [cph],
Csilla Scharle [cre, aut],
James Hayes [aut] ,
David Aikman [aut],
Ross Hull [aut],
Haritha Jagadeesh [aut],
Simon Barnes [ctb]
Maintainer: Csilla Scharle <csilla.scharle2@phs.scot>
Diff between phsopendata versions 1.0.3 dated 2026-02-05 and 1.1.0 dated 2026-05-06
DESCRIPTION | 33 ++-- MD5 | 22 +-- NEWS.md | 9 - R/get_resource_sql.R | 82 +++++++---- R/list_datasets.R | 15 ++ R/list_resources.R | 255 +++++++++++++++++++++++++++++------ R/request_url.R | 3 README.md | 83 ++++++----- man/get_resource_sql.Rd | 78 +++++++--- man/list_datasets.Rd | 16 ++ man/list_resources.Rd | 37 +++-- tests/testthat/test-list_resources.R | 238 ++++++++++++++++++++++++++++++-- 12 files changed, 695 insertions(+), 176 deletions(-)
Title: Access Colombian Data via APIs and Curated Datasets
Description: Provides a comprehensive interface to access diverse public data about
Colombia through multiple APIs and curated datasets. The package integrates
four different APIs: 'API-Colombia' for Colombian-specific data including
geography, culture, tourism, and government information; 'World Bank API'
for economic and demographic indicators; 'Nager.Date' for public holidays;
and 'REST Countries API' for general country information. The package enables
users to explore various aspects of Colombia such as geographic locations,
cultural attractions, economic indicators, demographic data, and public
holidays. Additionally, 'ColombiAPI' includes curated datasets covering
Bogota air stations, business and holiday dates, public schools, Colombian
coffee exports, cannabis licenses, Medellin rainfall, malls in Bogota, as
well as datasets on indigenous languages, student admissions and school
statistics, forest liana mortality, municipal and regional data, connectivity
and digital infrastructure, progra [...truncated...]
Author: Renzo Caceres Rossi [aut, cre]
Maintainer: Renzo Caceres Rossi <arenzocaceresrossi@gmail.com>
Diff between ColombiAPI versions 0.3.1 dated 2025-10-12 and 0.3.2 dated 2026-05-06
DESCRIPTION | 6 MD5 | 176 ++++++------- NAMESPACE | 2 NEWS.md | 220 ++++++++++++----- R/colombiapi-package.R | 4 R/data-documentation.R | 4 R/get_colombia_airports.R | 60 ++-- R/get_colombia_attractions.R | 64 +++- R/get_colombia_child_mortality.R | 44 ++- R/get_colombia_cities.R | 60 ++-- R/get_colombia_cpi.R | 44 ++- R/get_colombia_departments.R | 58 ++-- R/get_colombia_energy_use.R | 44 ++- R/get_colombia_gdp.R | 44 ++- R/get_colombia_holidays.R | 65 ++++- R/get_colombia_hospital_beds.R | 44 ++- R/get_colombia_invasive_species.R | 65 +++-- R/get_colombia_life_expectancy.R | 82 ++---- R/get_colombia_literacy_rate.R | 57 ++-- R/get_colombia_native_communities.R | 62 +++- R/get_colombia_natural_areas.R | 77 +++-- R/get_colombia_population.R | 47 ++- R/get_colombia_presidents.R | 56 ++-- R/get_colombia_radios.R | 64 +++- R/get_colombia_regions.R | 48 ++- R/get_colombia_typical_dishes.R | 66 +++-- R/get_colombia_unemployment.R | 44 ++- R/get_country_info_co.R | 111 +++++--- R/utils.R | 4 R/view_datasets_ColombiAPI.R | 4 README.md | 2 build/vignette.rds |binary inst/CITATION | 4 inst/licenses/LICENSE.md | 2 man/get_colombia_attractions.Rd | 30 ++ man/get_colombia_cities.Rd | 26 +- man/get_colombia_holidays.Rd | 16 + man/get_colombia_invasive_species.Rd | 31 ++ man/get_colombia_life_expectancy.Rd | 10 man/get_colombia_literacy_rate.Rd | 5 man/get_colombia_native_communities.Rd | 28 +- man/get_colombia_natural_areas.Rd | 31 ++ man/get_colombia_population.Rd | 3 man/get_colombia_radios.Rd | 30 +- man/get_colombia_typical_dishes.Rd | 31 +- man/get_country_info_co.Rd | 39 ++- tests/testthat/test-Bogota_airstations_df.R | 4 tests/testthat/test-Bogota_business_Date.R | 4 tests/testthat/test-Bogota_holidays_Date.R | 4 tests/testthat/test-Bogota_malls_tbl_df.R | 4 tests/testthat/test-Bucaramanga_wifi_tbl_df.R | 4 tests/testthat/test-Cannabis_Licenses_tbl_df.R | 4 tests/testthat/test-Cartagena_wifi_tbl_df.R | 4 tests/testthat/test-Colombia_coffee_tbl_df.R | 4 tests/testthat/test-Medellin_rain_tbl_df.R | 4 tests/testthat/test-Tulua_Public_Schools_tbl_df.R | 4 tests/testthat/test-admitted_students_df.R | 4 tests/testthat/test-dead_lianas_df.R | 4 tests/testthat/test-digital_centers_tbl_df.R | 4 tests/testthat/test-digital_graduates_tbl_df.R | 4 tests/testthat/test-foreign_visitors_tbl_df.R | 4 tests/testthat/test-gdp_departments_tbl_df.R | 4 tests/testthat/test-get_colombia_airports.R | 4 tests/testthat/test-get_colombia_attractions.R | 4 tests/testthat/test-get_colombia_child_mortality.R | 4 tests/testthat/test-get_colombia_cities.R | 186 +++----------- tests/testthat/test-get_colombia_cpi.R | 97 ++----- tests/testthat/test-get_colombia_departments.R | 224 ++++------------- tests/testthat/test-get_colombia_energy_use.R | 93 +++---- tests/testthat/test-get_colombia_gdp.R | 117 ++++----- tests/testthat/test-get_colombia_holidays.R | 85 +++--- tests/testthat/test-get_colombia_hospital_beds.R | 111 +++----- tests/testthat/test-get_colombia_invasive_species.R | 107 ++++---- tests/testthat/test-get_colombia_life_expectancy.R | 147 +++-------- tests/testthat/test-get_colombia_literacy_rate.R | 143 +++-------- tests/testthat/test-get_colombia_native_communities.R | 80 +++--- tests/testthat/test-get_colombia_natural_areas.R | 152 ++++++----- tests/testthat/test-get_colombia_population.R | 156 ++++-------- tests/testthat/test-get_colombia_presidents.R | 232 ++++++------------ tests/testthat/test-get_colombia_radios.R | 97 ++++--- tests/testthat/test-get_colombia_regions.R | 191 +++++--------- tests/testthat/test-get_colombia_typical_dishes.R | 90 +++--- tests/testthat/test-get_colombia_unemployment.R | 123 +++------ tests/testthat/test-get_country_info_co.R | 155 +++--------- tests/testthat/test-indigenous_vocabulary_df.R | 4 tests/testthat/test-municipalities_tbl_df.R | 4 tests/testthat/test-school_levels_df.R | 4 tests/testthat/test-vehicle_count_tbl_df.R | 4 tests/testthat/test-view_datasets_ColombiAPI.R | 4 89 files changed, 2335 insertions(+), 2361 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-03-24 0.3
2018-12-16 0.2
2017-11-27 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-04-21 0.5.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-15 1.1
2018-02-21 1.0.9
2018-01-24 1.0.8
2017-10-26 1.0.7
2017-04-06 1.0.6
2017-03-14 1.0.5
2016-12-30 1.0.4
2016-12-21 1.0.3
2016-04-24 1.0.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-05-15 0.5
2018-09-27 0.3
2018-04-22 0.2
2018-04-12 0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-04-24 1.2.0
2018-08-29 1.1.0
2018-02-09 1.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-15 0.4.0
2018-12-31 0.3.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-06-11 0.1.3
2018-06-04 0.1.2
2017-07-10 0.1.1
2017-03-14 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-02-27 1.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-01-22 4.0.0
2017-12-21 3.0.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2018-12-18 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-03-17 0.1.4
2018-04-29 0.1.3
2017-06-26 0.1.2
2017-01-07 0.1.1
2016-12-11 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-03-22 0.4-14.1
2019-05-27 0.4-14
2018-05-17 0.4-13
2013-11-12 0.4-11
2013-08-21 0.4-10
2012-06-19 0.4-6
2012-05-12 0.4-4
2011-11-02 0.4-3
2011-09-07 0.4-2
2011-09-05 0.4.1
Title: Spatial Data Analysis
Description: Methods for spatial data analysis with vector (points, lines, polygons) and raster (grid) data. Methods for vector data include geometric operations such as intersect and buffer. Raster methods include local, focal, global, zonal and geometric operations. The predict and interpolate methods facilitate the use of regression type (interpolation, machine learning) models for spatial prediction, including with satellite remote sensing data. Processing of very large files is supported. See the manual and tutorials on <https://rspatial.org/> to get started.
Author: Robert J. Hijmans [cre, aut] ,
Andrew Brown [aut] ,
Marcia Barbosa [aut] ,
Krzysztof Dyba [ctb] ,
Roger Bivand [ctb] ,
Michael Chirico [ctb] ,
Emanuele Cordano [ctb] ,
Edzer Pebesma [ctb] ,
Barry Rowlingson [ctb] ,
Michael D. Sumner [ctb]
Maintainer: Robert J. Hijmans <r.hijmans@gmail.com>
Diff between terra versions 1.9-11 dated 2026-03-26 and 1.9-25 dated 2026-05-06
terra-1.9-11/terra/R/merge.R |only terra-1.9-11/terra/R/update.R |only terra-1.9-11/terra/inst/ex/countries.rds |only terra-1.9-11/terra/src/gcp.cpp |only terra-1.9-11/terra/src/movingWindow.cpp |only terra-1.9-11/terra/src/ncdf.cpp |only terra-1.9-11/terra/src/nearest.cpp |only terra-1.9-11/terra/src/patches.cpp |only terra-1.9-11/terra/src/spatVector2.cpp |only terra-1.9-11/terra/src/spatVector2.h |only terra-1.9-11/terra/src/surfArea.cpp |only terra-1.9-11/terra/src/watershed_internal.cpp |only terra-1.9-11/terra/src/watershed_internal.h |only terra-1.9-25/terra/DESCRIPTION | 14 terra-1.9-25/terra/MD5 | 303 terra-1.9-25/terra/NAMESPACE | 52 terra-1.9-25/terra/NEWS.md | 56 terra-1.9-25/terra/R/Aclasses.R | 1 terra-1.9-25/terra/R/Agenerics.R | 6 terra-1.9-25/terra/R/Arith_generics.R | 5 terra-1.9-25/terra/R/RcppExports.R | 12 terra-1.9-25/terra/R/SpatRasterDataset.R | 15 terra-1.9-25/terra/R/animate.R | 23 terra-1.9-25/terra/R/autocor.R | 35 terra-1.9-25/terra/R/coerce.R | 45 terra-1.9-25/terra/R/crs.R | 35 terra-1.9-25/terra/R/distance.R | 17 terra-1.9-25/terra/R/focal.R | 127 terra-1.9-25/terra/R/generics.R | 3098 +++++----- terra-1.9-25/terra/R/geom.R | 54 terra-1.9-25/terra/R/kml.R |only terra-1.9-25/terra/R/messages.R | 9 terra-1.9-25/terra/R/ncdf.R | 49 terra-1.9-25/terra/R/options.R | 5 terra-1.9-25/terra/R/panel.R | 2 terra-1.9-25/terra/R/plot_add.R | 81 terra-1.9-25/terra/R/plot_legend_continuous.R | 37 terra-1.9-25/terra/R/plot_let.R | 58 terra-1.9-25/terra/R/plot_scale.R | 51 terra-1.9-25/terra/R/rast.R | 50 terra-1.9-25/terra/R/show.R | 551 - terra-1.9-25/terra/R/spatvec.R | 2 terra-1.9-25/terra/R/subset.R | 6 terra-1.9-25/terra/R/tile_apply.R |only terra-1.9-25/terra/R/tiles.R | 81 terra-1.9-25/terra/R/values.R | 19 terra-1.9-25/terra/R/vect.R | 12 terra-1.9-25/terra/R/write.R | 35 terra-1.9-25/terra/R/z_show.R |only terra-1.9-25/terra/build/partial.rdb |binary terra-1.9-25/terra/configure | 43 terra-1.9-25/terra/configure.ac | 41 terra-1.9-25/terra/inst/ex/nouragues.nc |only terra-1.9-25/terra/inst/tinytest/test_autocor.R |only terra-1.9-25/terra/inst/tinytest/test_classify_subst_parallel.R |only terra-1.9-25/terra/inst/tinytest/test_costDist.R |only terra-1.9-25/terra/inst/tinytest/test_distance.R | 126 terra-1.9-25/terra/inst/tinytest/test_focal2.R |only terra-1.9-25/terra/inst/tinytest/test_focal_cores.R |only terra-1.9-25/terra/inst/tinytest/test_future.R |only terra-1.9-25/terra/inst/tinytest/test_kml_extended.R |only terra-1.9-25/terra/inst/tinytest/test_merge.R | 16 terra-1.9-25/terra/inst/tinytest/test_misc-raster.R |only terra-1.9-25/terra/inst/tinytest/test_misc-vector.R |only terra-1.9-25/terra/inst/tinytest/test_nc.R |only terra-1.9-25/terra/inst/tinytest/test_proj_pipelines.R |only terra-1.9-25/terra/inst/tinytest/test_raster-local.R |only terra-1.9-25/terra/inst/tinytest/test_revdep_fixes.R |only terra-1.9-25/terra/inst/tinytest/test_sample.R |only terra-1.9-25/terra/inst/tinytest/test_tessellate.R |only terra-1.9-25/terra/inst/tinytest/test_tile_apply.R |only terra-1.9-25/terra/inst/tinytest/test_update.R |only terra-1.9-25/terra/inst/tinytest/test_vrt.R |only terra-1.9-25/terra/inst/tinytest/test_window.R | 61 terra-1.9-25/terra/man/add_mtext.Rd | 4 terra-1.9-25/terra/man/aggregate.Rd | 2 terra-1.9-25/terra/man/animate.Rd | 17 terra-1.9-25/terra/man/as.list.Rd | 2 terra-1.9-25/terra/man/autocor.Rd | 7 terra-1.9-25/terra/man/centroids.Rd | 2 terra-1.9-25/terra/man/chunk.Rd | 2 terra-1.9-25/terra/man/clamp_ts.Rd | 2 terra-1.9-25/terra/man/compare-generics.Rd | 1 terra-1.9-25/terra/man/compareGeom.Rd | 4 terra-1.9-25/terra/man/costDist.Rd | 11 terra-1.9-25/terra/man/crs.Rd | 2 terra-1.9-25/terra/man/densify.Rd | 2 terra-1.9-25/terra/man/focal.Rd | 13 terra-1.9-25/terra/man/gdal.Rd | 4 terra-1.9-25/terra/man/gridDist.Rd | 5 terra-1.9-25/terra/man/legend_cont.Rd |only terra-1.9-25/terra/man/makeTiles.Rd | 22 terra-1.9-25/terra/man/merge.Rd | 13 terra-1.9-25/terra/man/mosaic.Rd | 28 terra-1.9-25/terra/man/plet.Rd | 8 terra-1.9-25/terra/man/plot.Rd | 6 terra-1.9-25/terra/man/proj_pipelines.Rd |only terra-1.9-25/terra/man/project.Rd | 260 terra-1.9-25/terra/man/quantile.Rd | 2 terra-1.9-25/terra/man/rast.Rd | 18 terra-1.9-25/terra/man/sbar.Rd | 3 terra-1.9-25/terra/man/sds.Rd | 3 terra-1.9-25/terra/man/sprc.Rd | 2 terra-1.9-25/terra/man/terra-package.Rd | 143 terra-1.9-25/terra/man/terraOptions.Rd | 5 terra-1.9-25/terra/man/tessellate.Rd |only terra-1.9-25/terra/man/thin.Rd |only terra-1.9-25/terra/man/tile_apply.Rd |only terra-1.9-25/terra/man/update.Rd | 41 terra-1.9-25/terra/man/vect.Rd | 5 terra-1.9-25/terra/man/vrt.Rd | 2 terra-1.9-25/terra/man/warp_scale.Rd |only terra-1.9-25/terra/src/RcppExports.cpp | 42 terra-1.9-25/terra/src/RcppFunctions.cpp | 106 terra-1.9-25/terra/src/RcppModule.cpp | 30 terra-1.9-25/terra/src/arith.cpp | 21 terra-1.9-25/terra/src/catchments.cpp |only terra-1.9-25/terra/src/costDistance.cpp |only terra-1.9-25/terra/src/crs.cpp | 237 terra-1.9-25/terra/src/crs.h | 10 terra-1.9-25/terra/src/distRaster.cpp | 2376 +++++-- terra-1.9-25/terra/src/distValueRaster.cpp | 3 terra-1.9-25/terra/src/distVector.cpp | 187 terra-1.9-25/terra/src/distance.cpp | 2 terra-1.9-25/terra/src/extract.cpp | 2 terra-1.9-25/terra/src/file_utils.cpp | 154 terra-1.9-25/terra/src/file_utils.h | 3 terra-1.9-25/terra/src/focal.cpp | 1106 +++ terra-1.9-25/terra/src/gdal_algs.cpp | 454 + terra-1.9-25/terra/src/gdal_multidimensional.cpp | 1029 ++- terra-1.9-25/terra/src/gdalio.cpp | 35 terra-1.9-25/terra/src/gdalio.h | 7 terra-1.9-25/terra/src/geos_methods.cpp | 7 terra-1.9-25/terra/src/geos_spat.h | 11 terra-1.9-25/terra/src/geosphere.cpp | 342 + terra-1.9-25/terra/src/geosphere.h | 41 terra-1.9-25/terra/src/math_utils.cpp | 2 terra-1.9-25/terra/src/mediancut.cpp | 2 terra-1.9-25/terra/src/memory.cpp | 9 terra-1.9-25/terra/src/merge.cpp |only terra-1.9-25/terra/src/ram.cpp | 2 terra-1.9-25/terra/src/raster_methods.cpp | 903 -- terra-1.9-25/terra/src/raster_stats.cpp | 4 terra-1.9-25/terra/src/rasterize.cpp | 16 terra-1.9-25/terra/src/read.cpp | 28 terra-1.9-25/terra/src/read_gdal.cpp | 213 terra-1.9-25/terra/src/read_ogr.cpp | 429 - terra-1.9-25/terra/src/sample.cpp | 4 terra-1.9-25/terra/src/show.cpp |only terra-1.9-25/terra/src/sort.cpp | 16 terra-1.9-25/terra/src/spatBase.cpp | 3 terra-1.9-25/terra/src/spatBase.h | 12 terra-1.9-25/terra/src/spatDataframe.cpp | 23 terra-1.9-25/terra/src/spatDataframe.h | 16 terra-1.9-25/terra/src/spatFactor.cpp | 4 terra-1.9-25/terra/src/spatFactor.h | 8 terra-1.9-25/terra/src/spatRaster.cpp | 17 terra-1.9-25/terra/src/spatRaster.h | 33 terra-1.9-25/terra/src/spatRasterMultiple.cpp | 40 terra-1.9-25/terra/src/spatRasterMultiple.h | 15 terra-1.9-25/terra/src/spatSources.cpp | 11 terra-1.9-25/terra/src/spatTime.cpp | 25 terra-1.9-25/terra/src/spatTime.h | 5 terra-1.9-25/terra/src/spatVector.cpp | 29 terra-1.9-25/terra/src/spatVector.h | 21 terra-1.9-25/terra/src/string_utils.cpp | 11 terra-1.9-25/terra/src/string_utils.h | 2 terra-1.9-25/terra/src/table_utils.cpp | 17 terra-1.9-25/terra/src/tbb_helper.h |only terra-1.9-25/terra/src/tessellate.cpp |only terra-1.9-25/terra/src/vecmath.cpp | 2 terra-1.9-25/terra/src/vecmathse.cpp | 2 terra-1.9-25/terra/src/vector_methods.cpp | 6 terra-1.9-25/terra/src/write.cpp | 2 terra-1.9-25/terra/src/write_gdal.cpp | 137 terra-1.9-25/terra/src/write_ogr.cpp | 57 176 files changed, 9534 insertions(+), 4671 deletions(-)
Title: Automatic Short Form Creation
Description: Performs automatic creation of short forms of scales with an
ant colony optimization algorithm and a Tabu search. As implemented in the
package, the ant colony algorithm randomly selects items to build a model of
a specified length, then updates the probability of item selection according
to the fit of the best model within each set of searches. The algorithm
continues until the same items are selected by multiple ants a given number
of times in a row. On the other hand, the Tabu search changes one parameter at
a time to be either free, constrained, or fixed while keeping track of the
changes made and putting changes that result in worse fit in a "tabu" list
so that the algorithm does not revisit them for some number of searches.
See Leite, Huang, & Marcoulides (2008) <doi:10.1080/00273170802285743> for
an applied example of the ant colony algorithm, and Marcoulides & Falk (2018)
<doi:10.1080/10705511.2017.1409074> for an applied example of the Tabu search.
Author: Anthony Raborn [aut, cre] ,
Walter Leite [aut]
Maintainer: Anthony Raborn <anthony.w.raborn@gmail.com>
Diff between ShortForm versions 0.5.7 dated 2026-05-03 and 0.5.8 dated 2026-05-06
DESCRIPTION | 12 - MD5 | 14 - NAMESPACE | 8 R/ACO.R | 334 ++++++++++++++++++++++--------------- R/TS.R | 60 +++--- R/tabu_sem_shortform.R | 24 +- man/plot-ACO-ANY-method.Rd | 2 tests/testthat/test-aco-internals |only tests/testthat/test-tabu-internals |only 9 files changed, 271 insertions(+), 183 deletions(-)
Title: Spatial and Spatio-Temporal Models using 'INLA'
Description: Prepare objects to implement models over spatial and
spacetime domains with the 'INLA' package (<https://www.r-inla.org>).
These objects contain data to for the 'cgeneric' interface in
'INLA', enabling fast parallel computations.
We implemented the spatial barrier model, see Bakka et. al. (2019)
<doi:10.1016/j.spasta.2019.01.002>, and some of the spatio-temporal
models proposed in Lindgren et. al. (2024)
<https://raco.cat/index.php/SORT/article/view/428665>.
Details are provided in the available vignettes and from the URL bellow.
Author: Elias Teixeira Krainski [cre, aut, cph] ,
Finn Lindgren [aut] ,
Haavard Rue’ [aut]
Maintainer: Elias Teixeira Krainski <elias.krainski@kaust.edu.sa>
This is a re-admission after prior archival of version 0.1.13 dated 2025-12-21
Diff between INLAspacetime versions 0.1.13 dated 2025-12-21 and 0.1.14 dated 2026-05-06
INLAspacetime-0.1.13/INLAspacetime/R/cWhittleMatern.R |only INLAspacetime-0.1.13/INLAspacetime/man/cWhittleMatern.Rd |only INLAspacetime-0.1.13/INLAspacetime/man/pcrange.Rd |only INLAspacetime-0.1.14/INLAspacetime/DESCRIPTION | 38 ++---- INLAspacetime-0.1.14/INLAspacetime/MD5 | 54 ++++---- INLAspacetime-0.1.14/INLAspacetime/NAMESPACE | 12 + INLAspacetime-0.1.14/INLAspacetime/R/INLAspacetime.R | 5 INLAspacetime-0.1.14/INLAspacetime/R/aaa.R |only INLAspacetime-0.1.14/INLAspacetime/R/ar2precision.R | 2 INLAspacetime-0.1.14/INLAspacetime/R/barrierModel.define.R | 33 +---- INLAspacetime-0.1.14/INLAspacetime/R/cgeneric_sspde.R | 24 ++- INLAspacetime-0.1.14/INLAspacetime/R/mesh2fem.R | 12 - INLAspacetime-0.1.14/INLAspacetime/R/paramsUtils.R | 25 --- INLAspacetime-0.1.14/INLAspacetime/R/stModel.define.R | 26 +--- INLAspacetime-0.1.14/INLAspacetime/R/stModel.matrices.R | 2 INLAspacetime-0.1.14/INLAspacetime/R/stats.inla.R | 7 - INLAspacetime-0.1.14/INLAspacetime/R/zzz.R |only INLAspacetime-0.1.14/INLAspacetime/build/partial.rdb |binary INLAspacetime-0.1.14/INLAspacetime/build/vignette.rds |binary INLAspacetime-0.1.14/INLAspacetime/demo/pcrange.R | 16 -- INLAspacetime-0.1.14/INLAspacetime/man/bru_get_mapper.stModel_cgeneric.Rd | 2 INLAspacetime-0.1.14/INLAspacetime/man/cgeneric_sspde.Rd | 7 - INLAspacetime-0.1.14/INLAspacetime/src/INLAspacetime.c | 63 +++++++++- INLAspacetime-0.1.14/INLAspacetime/src/INLAspacetime.h | 32 ++++- INLAspacetime-0.1.14/INLAspacetime/src/INLAspacetime_init.c | 4 INLAspacetime-0.1.14/INLAspacetime/src/cgeneric_ast.c | 4 INLAspacetime-0.1.14/INLAspacetime/src/cgeneric_barrier.c | 4 INLAspacetime-0.1.14/INLAspacetime/src/cgeneric_nngp.c |only INLAspacetime-0.1.14/INLAspacetime/src/cgeneric_sspde.c | 4 INLAspacetime-0.1.14/INLAspacetime/src/cgeneric_sstspde.c | 6 INLAspacetime-0.1.14/INLAspacetime/src/cgeneric_vrst.c | 4 31 files changed, 214 insertions(+), 172 deletions(-)
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Title: R Interface to 'Redatam' Library
Description: Provides an API to work with 'Redatam' (see <https://redatam.org>)
databases in both formats: 'RXDB' (new format) and 'DICX' (old format) and running
'Redatam' programs written in 'SPC' language. It's a wrapper around 'Redatam'
core and provides functions to open/close a database (redatam_open()/redatam_close()),
list entities and variables from the database (redatam_entities(), redatam_variables())
and execute a 'SPC' program and gets the results as data frames
(redatam_query(), redatam_run()).
Author: Jaime Salvador [aut, cre] ,
CELADE [cph]
Maintainer: Jaime Salvador <jaime.salvador@ideasybits.com>
Diff between redatamx versions 1.2.1 dated 2025-11-22 and 1.3.0 dated 2026-05-06
DESCRIPTION | 6 MD5 | 66 +++--- NAMESPACE | 30 +-- NEWS.md | 7 R/output-env.R | 82 ++++---- R/redatam-api.R | 414 +++++++++++++++++++++--------------------- R/redatam-package.R | 16 - R/redatam-plugins.R | 76 +++---- R/redatam-query.R | 206 ++++++++++---------- R/redatam-run.R | 200 ++++++++++---------- R/zzz.R | 34 +-- README.md | 20 -- configure | 2 configure.win | 2 inst/COPYRIGHTS | 6 inst/License.txt | 2 man/outputs.Rd | 62 +++--- man/redatam_close.Rd | 56 ++--- man/redatam_create.Rd | 54 ++--- man/redatam_destroy_.Rd | 48 ++-- man/redatam_entities.Rd | 52 ++--- man/redatam_info.Rd | 40 ++-- man/redatam_init_.Rd | 54 ++--- man/redatam_internal_query.Rd | 58 ++--- man/redatam_internal_run.Rd | 58 ++--- man/redatam_load_plugin.Rd | 58 ++--- man/redatam_open.Rd | 52 ++--- man/redatam_query.Rd | 70 +++---- man/redatam_run.Rd | 70 +++---- man/redatam_save.Rd | 60 +++--- man/redatam_variables.Rd | 56 ++--- man/redatam_version.Rd | 40 ++-- man/redatamx-package.Rd | 58 ++--- src/red_initialize.cpp | 2 34 files changed, 1061 insertions(+), 1056 deletions(-)
Title: Qualitative Analysis with Large Language Models
Description: Tools for AI-assisted qualitative data coding using large language
models ('LLMs') via the 'ellmer' package, supporting providers including
'OpenAI', 'Anthropic', 'Google', 'Azure', and local models via 'Ollama'.
Provides a 'codebook'-based workflow for defining coding instructions and
applying them to texts, images, and other data. Includes built-in 'codebooks'
for common applications such as sentiment analysis and policy coding, and
functions for creating custom 'codebooks' for specific research questions.
Supports systematic replication across models and settings, computing
inter-coder reliability statistics including Krippendorff's alpha
(Krippendorff 2019, <doi:10.4135/9781071878781>) and Fleiss' kappa
(Fleiss 1971, <doi:10.1037/h0031619>), as well as gold-standard validation
metrics including accuracy, precision, recall, and F1 scores following
Sokolova and Lapalme (2009, <doi:10.1016/j.ipm.2009.03.002>). Provides audit
trail functionality for documenting coding [...truncated...]
Author: Seraphine F. Maerz [aut, cre] ,
Kenneth Benoit [aut]
Maintainer: Seraphine F. Maerz <seraphine.maerz@unimelb.edu.au>
Diff between quallmer versions 0.3.0 dated 2026-02-16 and 0.4.0 dated 2026-05-06
DESCRIPTION | 12 - MD5 | 62 ++++-- NAMESPACE | 7 NEWS.md | 37 ++++ R/accessors.R | 2 R/alpha_u.R |only R/as_qlm_coded.R | 138 ++++++++++++++- R/data.R | 71 +++++++ R/qlm_code.R | 35 +-- R/qlm_compare.R | 335 ++++++++++++++++++++++++++++++++++--- R/qlm_segment.R |only R/qlm_validate.R | 3 R/quallmer-package.R | 2 R/trail_compare.R | 17 - R/validate.R | 77 ++++---- README.md | 36 ++- build/partial.rdb |binary build/vignette.rds |binary data/data_corpus_MPexamples.rda |only data/data_corpus_MPexamplesseg.rda |only inst/doc/getting-started.Rmd | 2 inst/doc/getting-started.html | 5 man/annotate.Rd | 10 - man/as_qlm_coded.Rd | 22 ++ man/codebook.Rd | 1 man/data_corpus_MPexamples.Rd |only man/inputs.Rd | 1 man/qlm_code.Rd | 13 - man/qlm_compare.Rd | 62 ++++++ man/qlm_segment.Rd |only tests/testthat/_problems |only tests/testthat/test-alpha_u.R |only tests/testthat/test-qlm_code.R | 32 +-- tests/testthat/test-qlm_segment.R |only vignettes/getting-started.Rmd | 2 35 files changed, 807 insertions(+), 177 deletions(-)
Title: Safe, Multiple, Simultaneous String Substitution
Description: Designed to enable simultaneous substitution in strings in a safe fashion.
Safe means it does not rely on placeholders (which can cause errors in same length matches).
Author: Mark Ewing [aut, cre]
Maintainer: Mark Ewing <b.mark.ewing@gmail.com>
Diff between mgsub versions 1.7.3 dated 2021-07-28 and 2.0.0 dated 2026-05-06
DESCRIPTION | 17 MD5 | 39 + NAMESPACE | 1 NEWS.md | 80 +-- R/base_fallback_helpers.R |only R/helper_functions.R | 156 ++++-- R/mgsub-package.R |only R/mgsub.R | 184 +++---- R/mgsub_censor.R | 11 README.md | 90 +-- build/vignette.rds |binary inst/doc/Safe-Censoring.R | 138 ++--- inst/doc/Safe-Censoring.html | 923 +++++++++++++++++++++------------------- inst/doc/Safe-Substitution.R | 74 +-- inst/doc/Safe-Substitution.html | 823 +++++++++++++++++++---------------- man/censor_worker.Rd | 10 man/filter_overlap_base.Rd |only man/get_matches_base.Rd |only man/mgsub-package.Rd |only man/mgsub_censor.Rd | 10 src |only tests/testthat/test_mgsub.R | 713 +++++++++++++++++++++++++----- 22 files changed, 1959 insertions(+), 1310 deletions(-)
Title: Utility Functions for Production R Code
Description: A suite of utility functions providing functionality commonly
needed for production level projects such as logging, error handling,
cache management and date-time parsing. Functions for date-time parsing and
formatting require that time zones be specified explicitly, avoiding a common
source of error when working with environmental time series.
Author: Jonathan Callahan [aut, cre],
Eli Grosman [ctb],
Spencer Pease [ctb],
Thomas Bergamaschi [ctb]
Maintainer: Jonathan Callahan <jonathan.s.callahan@gmail.com>
Diff between MazamaCoreUtils versions 0.6.0 dated 2026-01-12 and 0.6.2 dated 2026-05-06
DESCRIPTION | 12 - MD5 | 130 ++++++------- NEWS.md | 14 + R/MazamaCoreUtils-package.R | 133 ++++++++----- R/cacheManagement.R | 107 ++++++----- R/createLocationID.R | 166 +++++------------ R/createLocationMask.R | 53 ++--- R/dateRange.R | 180 ++++++++---------- R/dateSequence.R | 128 ++++++------- R/devtools_check.R | 86 ++++---- R/errorHandling.R | 112 ++++------- R/functionArgument_lintRules.R | 83 +++----- R/functionArgument_linting.R | 87 ++++----- R/html_getLinks.R | 84 ++++---- R/html_getTables.R | 64 ++---- R/initializeLogging.R | 34 ++- R/loadDataFile.R | 71 ++++--- R/parseDatetime.R | 120 +++++------- R/setIfNull.R | 152 +++++---------- R/stopIfNull.R | 50 +++-- R/timeRange.R | 76 ++++--- R/timeStamp.R | 81 +++----- R/utils-location.R | 75 +++++-- R/utils-logging.R | 319 +++++++++++++++++++++------------ R/utils-pipe.R | 6 R/utils-tidyeval-data.R | 4 inst/doc/logging.html | 32 +-- man/APIKeys.Rd | 24 +- man/MazamaCoreUtils-package.Rd | 30 +-- man/createLocationID.Rd | 79 ++------ man/createLocationMask.Rd | 44 ++-- man/dateRange.Rd | 160 +++++++--------- man/dateSequence.Rd | 108 +++++------ man/getAPIKey.Rd | 15 - man/html_getLinks.Rd | 57 +++-- man/html_getTables.Rd | 51 ++--- man/initializeLogging.Rd | 31 ++- man/lintFunctionArgs.Rd | 80 ++++---- man/loadDataFile.Rd | 62 +++--- man/logLevels.Rd | 18 + man/logger.debug.Rd | 15 - man/logger.error.Rd | 15 - man/logger.fatal.Rd | 15 - man/logger.info.Rd | 15 - man/logger.isInitialized.Rd | 17 + man/logger.setLevel.Rd | 33 ++- man/logger.setup.Rd | 84 ++++---- man/logger.trace.Rd | 15 - man/logger.warn.Rd | 15 - man/manageCache.Rd | 91 +++++---- man/packageCheck.Rd | 67 +++--- man/parseDatetime.Rd | 112 +++++------ man/pipe.Rd | 2 man/setAPIKey.Rd | 14 - man/setIfNull.Rd | 91 +++------ man/showAPIKeys.Rd | 8 man/stopIfNull.Rd | 32 ++- man/stopOnError.Rd | 102 +++------- man/tidyeval-data.Rd | 2 man/timeRange.Rd | 69 +++---- man/timeStamp.Rd | 77 +++---- man/timezoneLintRules.Rd | 56 +---- man/validateLonLat.Rd | 23 +- man/validateLonsLats.Rd | 32 ++- tests/testthat/test-createLocationID.R | 24 -- tests/testthat/test-setIfNull.R | 68 +++---- 66 files changed, 2162 insertions(+), 2150 deletions(-)
More information about MazamaCoreUtils at CRAN
Permanent link
Title: Bivariate Copula Functions Based on Regular Grid
Description: Estimates grid type bivariate copula functions, calculates some association measures and provides several copula graphics.
Author: Rogelio Salinas Gutierrez [aut, cre, cph] ,
Angelica Hernandez Quintero [aut, cph] ,
Pedro Abraham Montoya Calzada [aut, cph]
Maintainer: Rogelio Salinas Gutierrez <rsalinas@correo.uaa.mx>
Diff between GRIDCOPULA versions 1.1.0 dated 2025-09-13 and 1.1.1 dated 2026-05-06
DESCRIPTION | 8 +++--- MD5 | 18 ++++++++------ NAMESPACE | 2 - R/alpha_logis.R |only R/calculate_lsq.R | 55 ++++++++++++++------------------------------- R/calculate_lsq2.R |only R/estimate_gridCopula.R | 23 ++++++++++++++++++ R/measures_grid.R | 2 - R/mi_grid.R | 4 +-- R/schweizer_grid.R | 9 +++++++ man/estimate.gridCopula.Rd | 2 - 11 files changed, 68 insertions(+), 55 deletions(-)
Title: Extension of `data.frame`
Description: Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and fast character-separated-value read/write. Offers a natural and flexible syntax, for faster development.
Author: Tyson Barrett [aut, cre] ,
Matt Dowle [aut],
Arun Srinivasan [aut],
Jan Gorecki [aut],
Michael Chirico [aut] ,
Toby Hocking [aut] ,
Benjamin Schwendinger [aut] ,
Ivan Krylov [aut] ,
Pasha Stetsenko [ctb],
Tom Short [ctb],
Steve Lianoglou [ctb],
Eduar [...truncated...]
Maintainer: Tyson Barrett <t.barrett88@gmail.com>
Diff between data.table versions 1.18.2.1 dated 2026-01-27 and 1.18.4 dated 2026-05-06
DESCRIPTION | 12 +-- MD5 | 48 ++++++------ NEWS.md | 12 +++ R/data.table.R | 9 +- R/frollapply.R | 4 - build/vignette.rds |binary inst/cc | 4 - inst/doc/datatable-benchmarking.html | 10 +- inst/doc/datatable-faq.html | 16 ++-- inst/doc/datatable-fread-and-fwrite.html | 10 +- inst/doc/datatable-importing.html | 10 +- inst/doc/datatable-intro.html | 10 +- inst/doc/datatable-joins.html | 10 +- inst/doc/datatable-keys-fast-subset.html | 16 ++-- inst/doc/datatable-programming.html | 16 ++-- inst/doc/datatable-reference-semantics.html | 12 +-- inst/doc/datatable-reshape.html | 18 ++-- inst/doc/datatable-sd-usage.html | 16 ++-- inst/doc/datatable-secondary-indices-and-auto-indexing.html | 24 +++--- inst/tests/froll.Rraw.bz2 |binary inst/tests/frollBatch.Rraw.bz2 |binary inst/tests/tests.Rraw.bz2 |binary src/assign.c | 4 - src/fread.c | 8 +- src/init.c | 2 25 files changed, 147 insertions(+), 124 deletions(-)
Title: Summarise and Visualise Characteristics of Patients in the OMOP
CDM
Description: Summarise and visualise the characteristics of patients in data
mapped to the Observational Medical Outcomes Partnership (OMOP) common data
model (CDM).
Author: Marti Catala [aut, cre] ,
Yuchen Guo [aut] ,
Mike Du [ctb] ,
Kim Lopez-Guell [aut] ,
Edward Burn [aut] ,
Nuria Mercade-Besora [aut] ,
Marta Alcalde [aut]
Maintainer: Marti Catala <marti.catalasabate@ndorms.ox.ac.uk>
Diff between CohortCharacteristics versions 1.1.2 dated 2026-03-21 and 1.1.3 dated 2026-05-06
DESCRIPTION | 24 MD5 | 45 - NEWS.md | 6 R/summariseLargeScaleCharacteristics.R | 131 ++- R/utilities.R | 65 + README.md | 54 - inst/CITATION |only inst/doc/summarise_characteristics.html | 602 +++++++-------- inst/doc/summarise_cohort_overlap.html | 220 ++--- inst/doc/summarise_cohort_timing.html | 222 ++--- inst/doc/summarise_large_scale_characteristics.html | 224 ++--- man/figures/README-unnamed-chunk-10-1.png |binary man/figures/README-unnamed-chunk-12-1.png |binary man/figures/README-unnamed-chunk-16-1.png |binary man/figures/README-unnamed-chunk-17-1.png |binary man/figures/README-unnamed-chunk-19-1.png |binary man/figures/README-unnamed-chunk-20-1.png |binary man/figures/README-unnamed-chunk-21-1.png |binary man/figures/README-unnamed-chunk-23-1.png |binary man/figures/README-unnamed-chunk-24-1.png |binary man/figures/README-unnamed-chunk-26-1.png |binary man/figures/README-unnamed-chunk-28-1.png |binary man/figures/README-unnamed-chunk-9-1.png |binary tests/testthat/test-summariseLargeScaleCharacteristics.R | 4 24 files changed, 860 insertions(+), 737 deletions(-)
More information about CohortCharacteristics at CRAN
Permanent link
Title: Tools for Bayesian Analyses
Description: Provides tools for conducting Bayesian analyses and Bayesian model averaging
(Kass and Raftery, 1995, <doi:10.1080/01621459.1995.10476572>,
Hoeting et al., 1999, <doi:10.1214/ss/1009212519>). The package contains
functions for creating a wide range of prior distribution objects, mixing posterior
samples from 'JAGS' and 'Stan' models, plotting posterior distributions, and etc...
The tools for working with prior distribution span from visualization, generating 'JAGS'
and 'bridgesampling' syntax to basic functions such as rng, quantile, and distribution functions.
Author: Frantisek Bartos [aut, cre]
Maintainer: Frantisek Bartos <f.bartos96@gmail.com>
Diff between BayesTools versions 0.2.23 dated 2025-12-08 and 0.3.0 dated 2026-05-06
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