Title: Working with Healthcare Databases
Description: A system for identifying diseases or events from healthcare databases and
preparing data for epidemiological studies. It includes capabilities not
supported by 'SQL', such as matching strings by 'stringr' style regular
expressions, and can compute comorbidity scores (Quan et al. (2005)
<doi:10.1097/01.mlr.0000182534.19832.83>) directly on a database server. The
implementation is based on 'dbplyr' with full 'tidyverse' compatibility.
Author: Kevin Hu [aut, cre, cph]
Maintainer: Kevin Hu <kevin.hu@bccdc.ca>
Diff between healthdb versions 0.5.0 dated 2026-01-07 and 0.5.1 dated 2026-05-26
DESCRIPTION | 13 ++-- MD5 | 32 +++++----- NEWS.md | 6 + R/identify_rows_sql.R | 40 ++++--------- R/if_dates.R | 2 inst/doc/healthdb.html | 135 ++++++++++++++++++++++---------------------- man/collapse_episode.Rd | 2 man/compute_comorbidity.Rd | 2 man/define_case.Rd | 2 man/define_case_with_age.Rd | 2 man/exclude.Rd | 8 +- man/fetch_var.Rd | 2 man/healthdb-package.Rd | 5 + man/identify_row.Rd | 4 - man/if_date.Rd | 2 man/restrict_date.Rd | 2 man/restrict_n.Rd | 2 17 files changed, 134 insertions(+), 127 deletions(-)
Title: Treatment Switching
Description: Implements rank preserving structural failure time model (RPSFTM), iterative parameter estimation (IPE), inverse probability of censoring weights (IPCW), marginal structural model (MSM), simple two-stage estimation (TSEsimp), and improved two-stage estimation with g-estimation (TSEgest) methods for treatment switching in randomized clinical trials.
Author: Kaifeng Lu [aut, cre]
Maintainer: Kaifeng Lu <kaifenglu@gmail.com>
Diff between trtswitch versions 0.2.5 dated 2026-03-13 and 0.2.6 dated 2026-05-26
DESCRIPTION | 12 + MD5 | 54 ++++---- NAMESPACE | 1 NEWS.md | 7 - R/ipcw.R | 8 - R/ipe.R | 6 R/msm.R | 8 - R/preptdc.R | 13 + R/rpsftm.R | 6 R/trtswitch-package.R | 2 R/tsegest.R | 6 R/tsesimp.R | 6 README.md |only build/vignette.rds |binary man/figures |only man/ipcw.Rd | 2 man/ipe.Rd | 2 man/msm.Rd | 2 man/preptdc.Rd | 8 - man/rpsftm.Rd | 2 man/tsegest.Rd | 2 man/tsesimp.Rd | 2 src/dataframe_list.h | 306 +++++++++++++++++++++++----------------------- src/logistic_regression.h | 13 - src/splines.h | 22 +-- src/survival_analysis.h | 18 +- src/thread_utils.h | 11 - src/utilities.cpp | 31 +++- src/utilities.h | 157 +++++++++++------------ 29 files changed, 377 insertions(+), 330 deletions(-)
Title: Data from all Seasons of Survivor (US) TV Series in Tidy Format
Description: Datasets detailing the results, castaways, and events of each
season of Survivor for the US, Australia, South Africa, New Zealand, and the
UK. This includes details on the cast, voting history, immunity and reward
challenges, jury votes, boot order, advantage details, and episode ratings.
Use this for analysis of trends and statistics of the game.
Author: Daniel Oehm [aut, cre],
Carly Levitz [ctb]
Maintainer: Daniel Oehm <danieloehm@gmail.com>
Diff between survivoR versions 2.3.10 dated 2026-02-05 and 2.3.12 dated 2026-05-26
DESCRIPTION | 6 MD5 | 71 ++++---- NAMESPACE | 1 NEWS.md | 12 + R/datasets.R | 61 +++++-- R/filters.R | 35 +++- README.md | 330 ++++++++++++++++++++++----------------- data/advantage_details.rda |binary data/advantage_movement.rda |binary data/advantage_timeline.rda |only data/auction_details.rda |binary data/boot_mapping.rda |binary data/boot_order.rda |binary data/castaway_details.rda |binary data/castaway_scores.rda |binary data/castaways.rda |binary data/challenge_description.rda |binary data/challenge_results.rda |binary data/challenge_summary.rda |binary data/confessionals.rda |binary data/episodes.rda |binary data/journeys.rda |binary data/jury_votes.rda |binary data/season_summary.rda |binary data/survivor_auction.rda |binary data/tribe_colours.rda |binary data/tribe_mapping.rda |binary data/viewers.rda |binary data/vote_history.rda |binary man/advantage_timeline.Rd |only man/castaway_scores.Rd | 31 +-- man/challenge_description.Rd | 3 man/confessionals.Rd | 2 man/filter_au.Rd |only man/filter_us.Rd | 2 man/season_summary.Rd | 1 tests/testthat/tests-functions.R | 8 tests/testthat/tests.R | 85 +++++----- 38 files changed, 392 insertions(+), 256 deletions(-)
Title: 'DataRobot' Predictive Modeling API
Description: For working with the 'DataRobot' predictive modeling platform's API <https://www.datarobot.com/>.
Author: Ron Pearson [aut],
Zachary Deane-Mayer [aut],
David Chudzicki [aut],
Dallin Akagi [aut],
Sergey Yurgenson [aut],
Thakur Raj Anand [aut],
Peter Hurford [aut],
Chester Ismay [aut],
AJ Alon [aut, cre],
Andrew Watson [aut],
Gregory Williams [aut],
Anasta [...truncated...]
Maintainer: AJ Alon <api-maintainer@datarobot.com>
Diff between datarobot versions 2.18.7 dated 2025-10-02 and 2.18.8 dated 2026-05-26
DESCRIPTION | 8 +++--- MD5 | 40 +++++++++++++++--------------- NEWS.md | 28 ++++++++++++++++++--- inst/doc/AdvancedTuning.html | 4 +-- inst/doc/AdvancedVignette.R | 21 ++++++++------- inst/doc/AdvancedVignette.Rmd | 33 +++++++++++++----------- inst/doc/AdvancedVignette.html | 30 ++++++++++++---------- inst/doc/Calendars.html | 4 +-- inst/doc/ComparingSubsets.html | 4 +-- inst/doc/ComplianceDocumentation.html | 4 +-- inst/doc/DatetimePartitionedProjects.html | 4 +-- inst/doc/Deployment.html | 4 +-- inst/doc/IntroductionToDataRobot.html | 4 +-- inst/doc/Multiclass.html | 4 +-- inst/doc/PartialDependence.html | 4 +-- inst/doc/PredictionExplanations.html | 4 +-- inst/doc/RatingTables.html | 4 +-- inst/doc/TimeSeries.html | 4 +-- inst/doc/TrainingPredictions.html | 4 +-- inst/doc/VariableImportance.html | 4 +-- vignettes/AdvancedVignette.Rmd | 33 +++++++++++++----------- 21 files changed, 141 insertions(+), 108 deletions(-)
Title: Heterogeneous Treatment Effects in Regression Discontinuity
Designs
Description: Understanding heterogeneous causal effects based on pretreatment covariates is a crucial step in modern empirical work in data science. Building on the recent developments in Calonico et al (2025) <doi:10.48550/arXiv.2503.13696>, this package provides tools for estimation and inference of heterogeneous treatment effects in Regression Discontinuity (RD) Designs. The package includes two main commands: 'rdhte' to conduct estimation and robust bias-corrected inference for conditional RD treatment effects (given choice of bandwidth parameter); 'rdbwhte', which implements automatic bandwidth selection methods; and 'rdhte_lincom' to test linear combinations of parameters.
Author: Sebastian Calonico [aut, cre],
Matias D. Cattaneo [aut],
Max H. Farrell [aut],
Filippo Palomba [aut],
Rocio Titiunik [aut]
Maintainer: Sebastian Calonico <scalonico@ucdavis.edu>
Diff between rdhte versions 0.1.0 dated 2025-07-18 and 0.2.0 dated 2026-05-26
rdhte-0.1.0/rdhte/inst/doc/rdhte-examples.R |only rdhte-0.1.0/rdhte/inst/doc/rdhte-examples.Rmd |only rdhte-0.1.0/rdhte/inst/doc/rdhte-examples.html |only rdhte-0.1.0/rdhte/vignettes/rdhte-examples.Rmd |only rdhte-0.2.0/rdhte/DESCRIPTION | 23 rdhte-0.2.0/rdhte/MD5 | 59 rdhte-0.2.0/rdhte/NAMESPACE | 60 rdhte-0.2.0/rdhte/NEWS.md |only rdhte-0.2.0/rdhte/R/helpers.R |only rdhte-0.2.0/rdhte/R/plot.rdhte.R |only rdhte-0.2.0/rdhte/R/rdbwhte.R | 953 ++++++---- rdhte-0.2.0/rdhte/R/rdhte-package.R | 112 - rdhte-0.2.0/rdhte/R/rdhte.R | 1840 +++++++++++---------- rdhte-0.2.0/rdhte/R/rdhte_contrast.R |only rdhte-0.2.0/rdhte/R/rdhte_lincom.R | 310 ++- rdhte-0.2.0/rdhte/build/vignette.rds |binary rdhte-0.2.0/rdhte/data |only rdhte-0.2.0/rdhte/inst/doc/rdhte-illustration.R |only rdhte-0.2.0/rdhte/inst/doc/rdhte-illustration.Rmd |only rdhte-0.2.0/rdhte/inst/doc/rdhte-illustration.html |only rdhte-0.2.0/rdhte/man/glance.rdbwhte.Rd |only rdhte-0.2.0/rdhte/man/glance.rdhte.Rd |only rdhte-0.2.0/rdhte/man/plot.rdhte.Rd |only rdhte-0.2.0/rdhte/man/print.rdbwhte.Rd | 36 rdhte-0.2.0/rdhte/man/print.rdhte.Rd | 36 rdhte-0.2.0/rdhte/man/print.summary.rdbwhte.Rd |only rdhte-0.2.0/rdhte/man/print.summary.rdhte.Rd |only rdhte-0.2.0/rdhte/man/rdbwhte.Rd | 274 +-- rdhte-0.2.0/rdhte/man/rdhte-package.Rd | 75 rdhte-0.2.0/rdhte/man/rdhte.Rd | 359 ++-- rdhte-0.2.0/rdhte/man/rdhte_contrast.Rd |only rdhte-0.2.0/rdhte/man/rdhte_dataset.Rd |only rdhte-0.2.0/rdhte/man/rdhte_lincom.Rd | 170 + rdhte-0.2.0/rdhte/man/summary.rdbwhte.Rd | 39 rdhte-0.2.0/rdhte/man/summary.rdhte.Rd | 39 rdhte-0.2.0/rdhte/man/tidy.rdbwhte.Rd |only rdhte-0.2.0/rdhte/man/tidy.rdhte.Rd |only rdhte-0.2.0/rdhte/tests |only rdhte-0.2.0/rdhte/vignettes/rdhte-illustration.Rmd |only 39 files changed, 2533 insertions(+), 1852 deletions(-)
Title: Phylogeny-Guided Bayesian Microbial Network Inference
Description: Implements a phylogeny-aware Bayesian graphical modeling
framework for microbial network inference using a shrinkage
precision estimator guided by a phylogenetic kernel, with optional
hyperparameter-ensemble edge reliability analysis.
Author: Rosa Aghdam [aut, cre]
Maintainer: Rosa Aghdam <rosaaghdam@gmail.com>
Diff between phymapnet versions 0.1.2 dated 2026-02-25 and 0.1.3 dated 2026-05-26
DESCRIPTION | 8 ++--- MD5 | 24 ++++++++-------- R/core-fit.R | 10 ++++-- R/normalization.R | 15 ++-------- R/preprocess.R | 42 ++++++++++++++++++++-------- R/reliability.R | 17 ++++++++--- R/utils-checks.R | 42 ++++++++++++++++++++++++++++ README.md | 32 +++++++++++++++++++--- man/phymapnet_fit.Rd | 10 ++++-- man/phymapnet_prepare_inputs.Rd | 11 ++++--- man/phymapnet_reliability.Rd | 9 +++--- tests/testthat/test-core.R | 58 ++++++++++++++++++++++++++++++++++++++++ tests/testthat/test-prepare.R | 58 +++++++++++++++++++++++++++++++++++++++- 13 files changed, 270 insertions(+), 66 deletions(-)
Title: Electricity Load Curves Forecasting at Individual Level
Description: Implements forecasting methods for individual electricity load
curves, including Kernel Wavelet Functional (KWF), clustered KWF,
Generalized Additive Models (GAM), Multivariate Adaptive Regression
Splines (MARS), and Long Short-Term Memory (LSTM) models. Provides
normalized dataset adapters for iFlex, StoreNet, Smart-Grid Smart-City,
Low Carbon London, and REFIT; download and read support for IDEAL and GX;
explicit Python backend selection for TensorFlow-based LSTM fits; helpers
for daily segmentation and rolling-origin benchmarking; and compact
shipped example panels and benchmark-result datasets.
Author: Frederic Bertrand [cre, aut] ,
Fatima Fahs [aut],
Myriam Maumy-Bertrand [aut]
Maintainer: Frederic Bertrand <frederic.bertrand@lecnam.net>
Diff between elcf4R versions 0.4.0 dated 2026-04-21 and 0.4.2 dated 2026-05-26
DESCRIPTION | 18 - MD5 | 36 +- NAMESPACE | 2 NEWS.md | 11 R/download_datasets.R | 71 +++++ R/elcf4R-package.R | 7 R/preprocess_segments.R | 425 ++++++++++++++++++++++++++++++++ R/sgsc_datasets.R |only README.md | 23 + data/elcf4r_sgsc_example.rda |only inst/CITATION | 5 inst/doc/elcf4R-datasets-vignette.R | 15 + inst/doc/elcf4R-datasets-vignette.Rmd | 23 + inst/doc/elcf4R-datasets-vignette.html | 96 ++++--- inst/doc/elcf4R-iflex-workflow.html | 8 man/elcf4R-package.Rd | 7 man/elcf4r_download_sgsc.Rd |only man/elcf4r_read_sgsc.Rd |only man/elcf4r_sgsc_example.Rd |only tests/testthat/test-release-hardening.R | 1 tests/testthat/test-sgsc.R |only vignettes/elcf4R-datasets-vignette.Rmd | 23 + 22 files changed, 694 insertions(+), 77 deletions(-)
Title: Extract 'REDCap' Databases into Tidy 'Tibble's
Description: Convert 'REDCap' exports into tidy tables for easy handling of 'REDCap' repeat instruments and event arms.
Author: Richard Hanna [aut, cre] ,
Stephan Kadauke [aut] ,
Ezra Porter [aut]
Maintainer: Richard Hanna <hannar1@chop.edu>
Diff between REDCapTidieR versions 1.2.4 dated 2025-07-28 and 1.2.5 dated 2026-05-26
DESCRIPTION | 8 MD5 | 68 +++--- NAMESPACE | 3 NEWS.md | 10 + R/REDCapTidieR-package.R | 6 R/bind_tibbles.R | 6 R/checks.R | 236 ++++++++++++++++++++--- R/clean_redcap.R | 21 -- R/clean_redcap_long.R | 46 ++-- R/combine_checkboxes.R | 62 ++---- R/extract_tibble.R | 6 R/labelled.R | 6 R/read_redcap.R | 110 +++++++---- R/skimr.R | 11 - R/utils.R | 37 +-- R/write.R | 131 +++++++------ README.md | 8 build/vignette.rds |binary inst/WORDLIST | 5 inst/doc/REDCapTidieR.html | 5 inst/doc/glossary.Rmd | 6 inst/doc/glossary.html | 13 - man/add_skimr_metadata.Rd | 4 man/check_metadata_field_types.Rd |only man/checkmate.Rd | 3 man/read_redcap.Rd | 33 +++ tests/testthat/test-checks.R | 196 +++++++++++++------ tests/testthat/test-clean_redcap_long.R | 121 ++++++------ tests/testthat/test-combine_checkboxes.R | 165 ++++++++-------- tests/testthat/test-labelled.R | 84 ++++---- tests/testthat/test-read_redcap.R | 309 +++++++++++++++++-------------- tests/testthat/test-skimr.R | 6 tests/testthat/test-utils.R | 197 +++++++++++-------- tests/testthat/test-write.R | 166 +++++++++------- tests/testthat/testthat-problems.rds |only vignettes/glossary.Rmd | 6 36 files changed, 1264 insertions(+), 830 deletions(-)
Title: Spatial Structural Change Detection by an Analysis of
Variability Between Blocks of Observations
Description: Provides methods to detect structural changes in time series or random fields (spatial data). Focus is on the detection of abrupt changes or trends in independent data, but the package also provides a function to de-correlate data with dependence. The functions are based on the test suggested in Schmidt (2024) <DOI:10.3150/23-BEJ1686> and the work in Görz and Fried (2025) <DOI:10.48550/arXiv.2512.11599>.
Author: Sheila Goerz [aut, cre],
Roland Fried [ctb, ths]
Maintainer: Sheila Goerz <sheila.goerz@tu-dortmund.de>
Diff between SChangeBlock versions 0.1.0 dated 2026-01-09 and 0.1.1 dated 2026-05-26
SChangeBlock-0.1.0/SChangeBlock/inst |only SChangeBlock-0.1.1/SChangeBlock/DESCRIPTION | 9 +-- SChangeBlock-0.1.1/SChangeBlock/MD5 | 31 +++++----- SChangeBlock-0.1.1/SChangeBlock/NAMESPACE | 1 SChangeBlock-0.1.1/SChangeBlock/R/RcppExports.R | 6 +- SChangeBlock-0.1.1/SChangeBlock/R/block_pValue.R | 2 SChangeBlock-0.1.1/SChangeBlock/R/block_stat.R | 35 +++++++++-- SChangeBlock-0.1.1/SChangeBlock/R/decorr.R | 37 +++++++++--- SChangeBlock-0.1.1/SChangeBlock/R/genField.R | 60 +++++++++++--------- SChangeBlock-0.1.1/SChangeBlock/README.md | 2 SChangeBlock-0.1.1/SChangeBlock/man/Mu.Rd | 2 SChangeBlock-0.1.1/SChangeBlock/man/changeRegion.Rd | 4 - SChangeBlock-0.1.1/SChangeBlock/man/decorr.Rd | 8 ++ SChangeBlock-0.1.1/SChangeBlock/man/genField.Rd | 7 +- SChangeBlock-0.1.1/SChangeBlock/man/genTheta.Rd | 4 - SChangeBlock-0.1.1/SChangeBlock/src/Mu.cpp | 2 SChangeBlock-0.1.1/SChangeBlock/src/dependency.cpp | 16 ++++- 17 files changed, 144 insertions(+), 82 deletions(-)
Title: Integration Unit Tests for Pharmacoepidemiological Studies
Description: An R interface to load testing data in the 'OMOP' Common Data Model ('CDM'). An input file, csv or xlsx, can be converted to a 'CDMConnector' object. This object can be used to execute and test studies that use the 'CDM' <https://www.ohdsi.org/data-standardization/>.
Author: Cesar Barboza [aut, cre] ,
Ioanna Nika [aut],
Ger Inberg [aut] ,
Adam Black [aut]
Maintainer: Cesar Barboza <c.barboza@darwin-eu.org>
Diff between TestGenerator versions 0.7.0 dated 2026-04-30 and 0.8.0 dated 2026-05-26
TestGenerator-0.7.0/TestGenerator/inst/cdmTableSpecifications/emptycdm_5.4/Archive.zip |only TestGenerator-0.7.0/TestGenerator/inst/testCases |only TestGenerator-0.7.0/TestGenerator/man/figures |only TestGenerator-0.7.0/TestGenerator/tests/testthat/test-visualisations.R |only TestGenerator-0.7.0/TestGenerator/tests/testthat/testCases/basic.json |only TestGenerator-0.7.0/TestGenerator/tests/testthat/testCases/basic2.json |only TestGenerator-0.7.0/TestGenerator/tests/testthat/testCases/basic3.json |only TestGenerator-0.7.0/TestGenerator/tests/testthat/testCases/diabetes.json |only TestGenerator-0.7.0/TestGenerator/tests/testthat/testCases/test33.json |only TestGenerator-0.7.0/TestGenerator/tests/testthat/testCases/test44.json |only TestGenerator-0.7.0/TestGenerator/tests/testthat/testCases/tests323.json |only TestGenerator-0.8.0/TestGenerator/DESCRIPTION | 23 TestGenerator-0.8.0/TestGenerator/MD5 | 60 + TestGenerator-0.8.0/TestGenerator/NAMESPACE | 6 TestGenerator-0.8.0/TestGenerator/NEWS.md | 12 TestGenerator-0.8.0/TestGenerator/R/patients.R | 263 -------- TestGenerator-0.8.0/TestGenerator/R/patientsRemote.R |only TestGenerator-0.8.0/TestGenerator/R/useGithubAction.R |only TestGenerator-0.8.0/TestGenerator/R/visualisations.R | 71 -- TestGenerator-0.8.0/TestGenerator/README.md | 304 ++++------ TestGenerator-0.8.0/TestGenerator/build/vignette.rds |binary TestGenerator-0.8.0/TestGenerator/inst/doc/gettingStarted.R | 33 - TestGenerator-0.8.0/TestGenerator/inst/doc/gettingStarted.Rmd | 61 -- TestGenerator-0.8.0/TestGenerator/inst/doc/gettingStarted.html | 138 ---- TestGenerator-0.8.0/TestGenerator/inst/doc/githubActions.R |only TestGenerator-0.8.0/TestGenerator/inst/doc/githubActions.Rmd |only TestGenerator-0.8.0/TestGenerator/inst/doc/githubActions.html |only TestGenerator-0.8.0/TestGenerator/inst/doc/remoteDatabases.R |only TestGenerator-0.8.0/TestGenerator/inst/doc/remoteDatabases.Rmd |only TestGenerator-0.8.0/TestGenerator/inst/doc/remoteDatabases.html |only TestGenerator-0.8.0/TestGenerator/inst/workflows |only TestGenerator-0.8.0/TestGenerator/man/cleanupTestCdm.Rd | 2 TestGenerator-0.8.0/TestGenerator/man/graphCohort.Rd | 30 TestGenerator-0.8.0/TestGenerator/man/patientsCDM.Rd | 2 TestGenerator-0.8.0/TestGenerator/man/useGithubAction.Rd |only TestGenerator-0.8.0/TestGenerator/tests/testthat/test-databricks.R |only TestGenerator-0.8.0/TestGenerator/tests/testthat/test-patients.R | 22 TestGenerator-0.8.0/TestGenerator/tests/testthat/test-patientsRemote.R |only TestGenerator-0.8.0/TestGenerator/tests/testthat/test-postgresql.R |only TestGenerator-0.8.0/TestGenerator/tests/testthat/test-sqlserver.R |only TestGenerator-0.8.0/TestGenerator/tests/testthat/test-useGithubAction.R |only TestGenerator-0.8.0/TestGenerator/vignettes/gettingStarted.Rmd | 61 -- TestGenerator-0.8.0/TestGenerator/vignettes/githubActions.Rmd |only TestGenerator-0.8.0/TestGenerator/vignettes/remoteDatabases.Rmd |only 44 files changed, 251 insertions(+), 837 deletions(-)
Title: Get Spanish Origin-Destination Data
Description: Gain seamless access to origin-destination (OD) data from the
Spanish Ministry of Transport, hosted at
<https://www.transportes.gob.es/ministerio/proyectos-singulares/estudios-de-movilidad-con-big-data/opendata-movilidad>.
This package simplifies the management of these large datasets by
providing tools to download zone boundaries, handle associated
origin-destination data, and process it efficiently with the 'duckdb'
database interface. Local caching minimizes repeated downloads,
streamlining workflows for researchers and analysts. Methods
described in Kotov et al. (2026) <doi:10.1177/23998083251415040>.
Extensive documentation is available at
<https://ropenspain.github.io/spanishoddata/index.html>, offering
guides on creating static and dynamic mobility flow visualizations and
transforming large datasets into analysis-ready formats.
Author: Egor Kotov [aut, cre] ,
Robin Lovelace [aut] ,
Eugeni Vidal-Tortosa [ctb]
Maintainer: Egor Kotov <kotov.egor@gmail.com>
Diff between spanishoddata versions 0.2.4 dated 2026-04-09 and 0.2.5 dated 2026-05-26
DESCRIPTION | 10 +- MD5 | 46 ++++++------- NEWS.md | 9 ++ R/available-data.R | 76 ++++++++++++++-------- R/check-files.R | 3 R/dev-tools.R | 25 +++++-- R/download_data.R | 3 R/get-zones.R | 1 README.md | 33 ++++++++- build/partial.rdb |binary build/vignette.rds |binary inst/doc/convert.html | 2 inst/doc/quick-get.html | 2 inst/doc/v1-2020-2021-mitma-data-codebook.html | 2 inst/doc/v2-2022-onwards-mitma-data-codebook.html | 2 inst/schemaorg.json | 4 - man/spod_available_data.Rd | 4 - man/spod_available_data_v1.Rd | 4 - man/spod_available_data_v2.Rd | 2 tests/testthat/test-available-data-coverage.R | 37 ++++++++-- tests/testthat/test-available-data-s3-coverage.R |only tests/testthat/test-available-data.R | 2 tests/testthat/test-data-dir-coverage.R | 53 +++++++++++++++ tests/testthat/test-folders-coverage.R |only tests/testthat/test-internal_utils.R | 18 +++++ 25 files changed, 251 insertions(+), 87 deletions(-)
Title: 'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest
Neighbors
Description: 'Hnswlib' is a C++ library for Approximate Nearest Neighbors.
This package provides a minimal R interface by relying on the 'Rcpp'
package. See <https://github.com/nmslib/hnswlib> for more on
'hnswlib'. 'hnswlib' is released under Version 2.0 of the Apache
License.
Author: James Melville [aut, cre, cph],
Aaron Lun [ctb],
Samuel Granjeaud [ctb],
Dmitriy Selivanov [ctb],
Yuxing Liao [ctb]
Maintainer: James Melville <jlmelville@gmail.com>
Diff between RcppHNSW versions 0.6.0 dated 2024-02-04 and 0.7.0 dated 2026-05-26
RcppHNSW-0.6.0/RcppHNSW/inst/include/RcppPerpendicular |only RcppHNSW-0.7.0/RcppHNSW/DESCRIPTION | 8 RcppHNSW-0.7.0/RcppHNSW/MD5 | 58 - RcppHNSW-0.7.0/RcppHNSW/NAMESPACE | 8 RcppHNSW-0.7.0/RcppHNSW/NEWS.md | 246 ++-- RcppHNSW-0.7.0/RcppHNSW/R/hnsw.R | 694 ++++++------ RcppHNSW-0.7.0/RcppHNSW/R/rcpphnsw-package.R | 64 - RcppHNSW-0.7.0/RcppHNSW/R/util.R | 59 - RcppHNSW-0.7.0/RcppHNSW/inst/include/hnswalg.h | 2 RcppHNSW-0.7.0/RcppHNSW/inst/include/pforr |only RcppHNSW-0.7.0/RcppHNSW/man/RcppHnsw-package.Rd | 2 RcppHNSW-0.7.0/RcppHNSW/man/hnsw_build.Rd | 10 RcppHNSW-0.7.0/RcppHNSW/man/hnsw_knn.Rd | 7 RcppHNSW-0.7.0/RcppHNSW/man/hnsw_search.Rd | 4 RcppHNSW-0.7.0/RcppHNSW/src/Makevars | 1 RcppHNSW-0.7.0/RcppHNSW/src/RcppExports.cpp | 2 RcppHNSW-0.7.0/RcppHNSW/src/hnsw.cpp | 109 + RcppHNSW-0.7.0/RcppHNSW/tests/testthat.R | 8 RcppHNSW-0.7.0/RcppHNSW/tests/testthat/helper_data.R | 114 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_add_get_all.R | 104 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_build_search.R | 44 RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_cosine.R | 86 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_get_items.R | 62 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_get_knn.R | 46 RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_increase_size.R | 94 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_l2.R | 98 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_parallel.R | 100 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_random_seed.R |only RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_resize_index.R | 86 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_save_load.R |only RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_search_one.R | 72 - RcppHNSW-0.7.0/RcppHNSW/tests/testthat/test_verbose.R | 24 32 files changed, 1180 insertions(+), 1032 deletions(-)
Title: NHDPlus Tools
Description: Tools for traversing and working with National Hydrography Dataset Plus (NHDPlus) data. All methods implemented in 'nhdplusTools' are available in the NHDPlus documentation available from the US Environmental Protection Agency <https://www.epa.gov/waterdata/basic-information>.
Author: David Blodgett [aut, cre] ,
Mike Johnson [aut] ,
Marc Weber [ctb] ,
Josh Erickson [ctb],
Lauren Koenig [ctb]
Maintainer: David Blodgett <dblodgett@usgs.gov>
Diff between nhdplusTools versions 1.4.2 dated 2026-01-21 and 1.5.0 dated 2026-05-26
DESCRIPTION | 8 MD5 | 110 +- NAMESPACE | 7 NEWS.md | 793 +++++++-------- R/A_nhdplusTools.R | 1146 +++++++++++----------- R/arcrest_tools.R | 4 R/downloading_tools.R | 824 +++++++-------- R/get_codes.R | 4 R/get_drainage_area_estimates.R |only R/get_hydro.R | 76 + R/get_nhdplus.R | 35 R/get_nldi.R | 11 R/get_vaa.R | 850 +++++++++------- R/oafeat_tools.R | 137 +- R/plot_nhdplus.R | 24 R/prep_nhdplus.R | 10 R/rescale_catchments.R | 14 R/subset_nhdplus.R | 162 --- README.md | 81 - build/vignette.rds |binary inst/CITATION | 26 inst/doc/drainage_area_estimation.R |only inst/doc/drainage_area_estimation.Rmd |only inst/doc/drainage_area_estimation.html |only inst/doc/get_3dhp_data.R | 2 inst/doc/get_3dhp_data.Rmd | 2 inst/doc/get_3dhp_data.html | 12 inst/doc/get_data_overview.Rmd | 686 ++++++------- inst/doc/get_data_overview.html | 42 inst/doc/nhdplusTools.html | 74 - inst/doc/nhdplushr.html | 81 - inst/doc/plot_nhdplus.html | 12 inst/extdata/hex.R | 20 man/get_3dhp.Rd | 6 man/get_catchment_characteristics.Rd | 28 man/get_characteristics_metadata.Rd | 9 man/get_drainage_area_estimates.Rd |only man/get_gagesII.Rd | 3 man/get_huc.Rd | 26 man/get_nhdarea.Rd | 3 man/get_nhdplus.Rd | 10 man/get_nldi_basin.Rd | 3 man/get_nldi_index.Rd | 8 man/get_nwis.Rd | 3 man/get_waterbodies.Rd | 3 man/query_usgs_oafeat.Rd | 13 man/rescale_catchment_characteristics.Rd | 12 tests/testthat/data/negotiate_outlet_fixture.rds |only tests/testthat/test_01_get_nldi.R | 8 tests/testthat/test_02_subset.R | 4 tests/testthat/test_02_subset_extras.R | 36 tests/testthat/test_03_get_functions.R | 105 +- tests/testthat/test_get_3dhp.R | 11 tests/testthat/test_get_drainage_area_estimates.R |only tests/testthat/test_get_network.R | 3 tests/testthat/test_get_vaa.R | 78 + tests/testthat/test_rebuild_topology.R | 7 vignettes/drainage_area_estimation.Rmd |only vignettes/get_3dhp_data.Rmd | 2 vignettes/get_data_overview.Rmd | 686 ++++++------- 60 files changed, 3402 insertions(+), 2918 deletions(-)
Title: Missingness Alleviation for Network Analysis
Description: Provides functionality for estimating cross-sectional network structures representing partial correlations while accounting for missing data. Networks are estimated via neighborhood selection or regularization, with model selection guided by information criteria. Missing data can be handled primarily via multiple imputation or a maximum likelihood-based approach, as demonstrated by Nehler and Schultze (2025) <doi:10.1080/00273171.2025.2503833> and Nehler and Schultze (2026) <doi:10.1037/met0000828>. Deletion-based approaches are also available but play a secondary role.
Author: Kai Jannik Nehler [aut, cre]
Maintainer: Kai Jannik Nehler <nehler@psych.uni-frankfurt.de>
Diff between mantar versions 0.2.0 dated 2026-01-17 and 0.3.0 dated 2026-05-26
DESCRIPTION | 8 MD5 | 58 +- NEWS.md | 21 + R/checker.R | 141 +++++-- R/cor_calc.R | 99 ++++ R/ics.R | 2 R/neighborhood_net.R | 83 +++- R/regularization_net.R | 168 ++++++-- R/search_regression.R | 2 build/partial.rdb |binary build/stage23.rdb |binary data/mantar_dummy_full_cat.rda |binary data/mantar_dummy_full_cont.rda |binary data/mantar_dummy_full_mix.rda |binary data/mantar_dummy_mis_cat.rda |binary data/mantar_dummy_mis_cont.rda |binary data/mantar_dummy_mis_mix.rda |binary inst/REFERENCES.bib | 13 inst/doc/mantar.R | 20 - inst/doc/mantar.Rmd | 53 +- inst/doc/mantar.html | 619 ++++++++++++++++--------------- man/cor_calc.Rd | 16 man/neighborhood_net.Rd | 15 man/regression_opt.Rd | 2 man/regularization_net.Rd | 67 ++- tests/testthat/test-cor_calc.R | 76 +++ tests/testthat/test-neighborhood_net.R | 43 ++ tests/testthat/test-regularization_net.R | 434 +++++++++++++++++++++ tests/testthat/test-search_regression.R | 1 vignettes/mantar.Rmd | 53 +- 30 files changed, 1498 insertions(+), 496 deletions(-)
Title: Facilitate Writing Documents in American Psychological
Association Style, Seventh Edition
Description: Create American Psychological Association Style, Seventh
Edition documents. Format numbers and text consistent with APA style.
Create tables that comply with APA style by extending flextable
functions.
Author: W. Joel Schneider [aut, cre]
Maintainer: W. Joel Schneider <w.joel.schneider@gmail.com>
Diff between apa7 versions 0.1.0 dated 2025-09-10 and 0.1.3 dated 2026-05-26
apa7-0.1.0/apa7/R/formating.R |only apa7-0.1.3/apa7/DESCRIPTION | 18 apa7-0.1.3/apa7/MD5 | 68 apa7-0.1.3/apa7/NEWS.md | 51 apa7-0.1.3/apa7/R/apaquarto.R | 65 apa7-0.1.3/apa7/R/formatting.R |only apa7-0.1.3/apa7/R/tables.R | 1367 ++++++++++-------- apa7-0.1.3/apa7/R/zzz.R | 7 apa7-0.1.3/apa7/README.md | 8 apa7-0.1.3/apa7/build/vignette.rds |binary apa7-0.1.3/apa7/inst/WORDLIST | 12 apa7-0.1.3/apa7/inst/doc/apa7.html | 82 - apa7-0.1.3/apa7/man/add_list_column.Rd | 17 apa7-0.1.3/apa7/man/align_chr.Rd | 2 apa7-0.1.3/apa7/man/apa7-package.Rd | 5 apa7-0.1.3/apa7/man/apa7_defaults.Rd | 2 apa7-0.1.3/apa7/man/apa_cor.Rd | 8 apa7-0.1.3/apa7/man/apa_format_columns.Rd | 2 apa7-0.1.3/apa7/man/apa_loadings.Rd | 6 apa7-0.1.3/apa7/man/apa_p.Rd | 4 apa7-0.1.3/apa7/man/apa_p_star_note.Rd | 2 apa7-0.1.3/apa7/man/column_format.Rd | 2 apa7-0.1.3/apa7/man/column_formats.Rd | 2 apa7-0.1.3/apa7/man/column_spanner_label.Rd | 2 apa7-0.1.3/apa7/man/hanging_indent.Rd | 2 apa7-0.1.3/apa7/man/is_numeric_like.Rd | 2 apa7-0.1.3/apa7/man/make_apaquarto.Rd | 2 apa7-0.1.3/apa7/man/num_pad.Rd | 2 apa7-0.1.3/apa7/man/p2stars.Rd | 2 apa7-0.1.3/apa7/man/pivot_wider_name_first.Rd | 6 apa7-0.1.3/apa7/man/star_balance.Rd | 2 apa7-0.1.3/apa7/man/str_wrap_equal.Rd | 2 apa7-0.1.3/apa7/man/tagger.Rd | 2 apa7-0.1.3/apa7/tests/testthat/test-column-spanner.R |only apa7-0.1.3/apa7/tests/testthat/test-tables.R |only apa7-0.1.3/apa7/tests/testthat/test-tagger.R |only apa7-0.1.3/apa7/tests/testthat/test-text-formatting.R |only apa7-0.1.3/apa7/tests/testthat/tests.R | 221 +- 38 files changed, 1186 insertions(+), 789 deletions(-)
Title: Conditional Mutual Information Estimation for Multi-Omics Data
Description: The biases introduced in association measures, particularly mutual information,
are influenced by factors such as tumor purity, mutation burden, and hypermethylation.
This package provides the estimation of conditional mutual information (CMI) and its
statistical significance with a focus on its application to multi-omics data. Utilizing
B-spline functions (inspired by Daub et al. (2004) <doi:10.1186/1471-2105-5-118>), the package offers tools to estimate the association between heterogeneous multi-
omics data, while removing the effects of confounding factors. This helps to unravel complex
biological interactions. In addition, it includes methods to evaluate the statistical significance
of these associations, providing a robust framework for multi-omics data integration and
analysis. This package is ideal for researchers in computational biology, bioinformatics,
and systems biology seeking a comprehensive tool for understanding interdependencies in
omics data.
Author: Gaojianyong Wang [aut, cre]
Maintainer: Gaojianyong Wang <gjywang@gmail.com>
Diff between conMItion versions 0.3.0 dated 2026-04-14 and 0.3.1 dated 2026-05-26
DESCRIPTION | 6 - MD5 | 15 +-- NAMESPACE | 3 R/ComputeMatrix.R | 210 +++++++++++++++++++++++++++++++++++++++++++- man/CMIBiCondimat2mat.Rd | 2 man/CMIBiCondimat2matAll.Rd |only man/CMImat2mat.Rd | 2 man/CMImat2matAll.Rd |only man/MImat2mat.Rd | 2 man/MImat2matAll.Rd |only 10 files changed, 225 insertions(+), 15 deletions(-)
Title: Estimation in Staggered First Switch Designs, where Groups
Experience their First Treatment Change at Different Points in
Time
Description: Estimation of heterogeneity-robust difference-in-differences estimators, with a binary, discrete, or continuous treatment, in designs where past treatments may affect the current outcome.
Author: Anzony Quispe [aut, cre],
Diego Ciccia [aut],
Felix Knau [aut],
Melitine Malezieux [aut],
Doulo Sow [aut],
Clement de Chaisemartin [aut]
Maintainer: Anzony Quispe <anzony.quispe@gmail.com>
Diff between DIDmultiplegtDYN versions 2.3.3 dated 2026-03-17 and 2.3.4 dated 2026-05-26
DESCRIPTION | 13 MD5 | 7 NAMESPACE | 1 R/did_multiplegt_bootstrap.R | 607 ++++++++++++++++++++++++++++------------ R/did_multiplegt_main_smaller.R |only 5 files changed, 438 insertions(+), 190 deletions(-)
More information about DIDmultiplegtDYN at CRAN
Permanent link
Title: Modelling Relative Sea Level Data
Description: The Bayesian modelling of relative sea-level data
using a comprehensive approach that incorporates
various statistical models within a unifying framework.
Details regarding each statistical models;
linear regression (Ashe et al 2019) <doi:10.1016/j.quascirev.2018.10.032>,
change point models (Cahill et al 2015) <doi:10.1088/1748-9326/10/8/084002>,
integrated Gaussian process models (Cahill et al 2015) <doi:10.1214/15-AOAS824>,
temporal splines (Upton et al 2025) <doi:10.32614/RJ-2024-018>,
spatio-temporal splines (Upton et al 2025) <doi:10.32614/RJ-2024-018> and
generalised additive models (Upton et al 2025) <doi:10.1093/jrsssc/qlae044>.
This package facilitates data loading,
model fitting and result summarisation.
Notably, it accommodates the inherent measurement errors
found in relative sea-level data across multiple dimensions,
allowing for their inclusion in the statistical models.
Author: Maeve Upton [cph, aut, cre] ,
Andrew Parnell [aut],
Niamh Cahill [aut]
Maintainer: Maeve Upton <uptonmaeve010@gmail.com>
This is a re-admission after prior archival of version 0.1.1 dated 2023-06-15
Diff between reslr versions 0.1.1 dated 2023-06-15 and 0.2.0 dated 2026-05-26
DESCRIPTION | 17 MD5 | 42 - NEWS.md | 6 R/internal_functions.R | 31 - R/reslr_load.R | 10 R/reslr_mcmc.R | 8 build/vignette.rds |binary inst/doc/advanced_reslr.R | 270 +++++----- inst/doc/advanced_reslr.Rmd | 5 inst/doc/advanced_reslr.html | 441 ++++++++-------- inst/doc/quick_start.R | 29 - inst/doc/quick_start.Rmd | 3 inst/doc/quick_start.html | 116 ++-- inst/doc/reslr.R | 388 +++++++------- inst/doc/reslr.Rmd | 32 - inst/doc/reslr.html | 1140 +++++++++++++++++++++---------------------- man/reslr_mcmc.Rd | 8 tests/testthat/_snaps |only vignettes/advanced_reslr.Rmd | 5 vignettes/quick_start.Rmd | 3 vignettes/reslr.Rmd | 32 - 21 files changed, 1314 insertions(+), 1272 deletions(-)
Title: Multivariate Synthetic Control Method Using Time Series
Description: Three generalizations of the synthetic control method (which has
already an implementation in package 'Synth') are implemented: first,
'MSCMT' allows for using multiple outcome variables, second, time series
can be supplied as economic predictors, and third, a well-defined
cross-validation approach can be used.
Much effort has been taken to make the implementation as stable as possible
(including edge cases) without losing computational efficiency.
A detailed description of the main algorithms is given in
Becker and Klößner (2018) <doi:10.1016/j.ecosta.2017.08.002>.
Author: Martin Becker [aut, cre] ,
Stefan Kloessner [aut],
Karline Soetaert [com],
Jack Dongarra [cph],
R.J. Hanson [cph],
K.H. Haskell [cph],
Cleve Moler [cph],
LAPACK authors [cph]
Maintainer: Martin Becker <martin.becker@mx.uni-saarland.de>
Diff between MSCMT versions 1.4.2 dated 2026-05-19 and 1.4.3 dated 2026-05-26
DESCRIPTION | 14 MD5 | 38 +- NAMESPACE | 4 NEWS | 12 R/ModularOptimization.r | 6 R/atomOpt.r | 2 R/ggplot.r | 134 ++++---- R/improveSynth.r | 618 ++++++++++++++++++++--------------------- R/multiOpt.r | 7 R/wnnls.r | 172 +++++------ build/partial.rdb |binary build/vignette.rds |binary inst/doc/CheckingSynth.html | 380 ++++++++++++++----------- inst/doc/UsingTimeSeries.html | 302 ++++++++++++-------- inst/doc/WorkingWithMSCMT.html | 588 ++++++++++++++++++++++++--------------- man/MSCMTpackage.Rd | 9 man/ggplot.mscmt.Rd | 2 src/DE.c | 4 src/inverse.f | 38 +- src/solve.f | 18 - 20 files changed, 1334 insertions(+), 1014 deletions(-)
Title: Assessing the Integrity and Trustworthiness of Clinical Trials
Data
Description: The integrity package implements the IPD Integrity Tool, a
structured and transparent framework for evaluating the integrity of
individual participant data (IPD) from randomised trials (see Hunter et
al. (2024) <doi:10.1002/jrsm.1738> and <doi:10.32614/RJ-2017-008>). It
supports users to identify potential issues, such as unusual data
patterns, implausible values, lack of expected correlations, date
violations, and inconsistencies. The package provides reproducible
workflows for screening, documenting and summarising integrity concerns,
and may be applied by evidence synthesists, editors, and others to
determine whether a randomised trial may be considered sufficiently
trustworthy to contribute to the evidence base that informs policy and
practice.
Author: Sol Libesman [aut, cre],
Kylie Hunter [aut],
David Nguyen [aut],
Dario Strbenac [aut],
Anne Lene Seidler [aut],
Jie Kang [aut]
Maintainer: Sol Libesman <sol.libesman@sydney.edu.au>
Diff between integrity versions 1.0 dated 2026-04-08 and 1.0.1 dated 2026-05-26
DESCRIPTION | 40 MD5 | 50 NAMESPACE | 48 NEWS.md |only R/checks.R | 1235 +++++++--- R/metadata_io.R |only R/prepare_data.R | 138 - R/run_checks.R | 460 +++ README.md | 4 build/vignette.rds |binary inst/doc/integrity.R | 199 + inst/doc/integrity.Rmd | 582 +++- inst/doc/integrity.html | 3581 +++++++++++++++++++----------- inst/extdata/variables.yaml | 68 inst/extdata/variables_template.R |only inst/extdata/variables_template.xlsx |only inst/scripts/about.txt | 2 man/private_differential_variability.Rd | 56 man/private_imbalance_day_intervention.Rd | 56 man/private_implausible_values.Rd | 52 man/private_prepare_data.Rd | 50 man/private_repeating_baseline.Rd | 50 man/private_terminal_digits.Rd | 50 man/private_unexpectedly_uncorrelated.Rd | 50 man/read_metadata_excel.Rd |only man/read_metadata_r.Rd |only man/run_checks.Rd | 67 tests |only vignettes/integrity.Rmd | 582 +++- 29 files changed, 5139 insertions(+), 2281 deletions(-)
Title: Visualization and Tools for Ichimoku Kinko Hyo Strategies
Description: An implementation of 'Ichimoku Kinko Hyo', also commonly
known as cloud charts. Static and interactive visualizations with
tools for creating, backtesting and development of quantitative
ichimoku strategies. As described in Sasaki (1996, ISBN:4925152009),
the technique is a refinement on candlestick charting, originating
from Japan and now in widespread use in technical analysis worldwide.
Translating as one-glance equilibrium chart, it allows the price
action and market structure of financial securities to be determined
at-a-glance. Incorporates an interface with the 'OANDA fxTrade' API
<https://developer.oanda.com/> for retrieving historical and live
streaming price data for major currencies, metals, commodities,
government bonds and stock indices.
Author: Charlie Gao [aut, cre] ,
Hibiki AI Limited [cph]
Maintainer: Charlie Gao <charlie.gao@shikokuchuo.net>
This is a re-admission after prior archival of version 1.5.6 dated 2025-03-14
Diff between ichimoku versions 1.5.6 dated 2025-03-14 and 1.5.7 dated 2026-05-26
DESCRIPTION | 57 +++--- MD5 | 58 +++--- NAMESPACE | 2 NEWS.md | 4 R/archive.R | 4 R/ichimoku-package.R | 23 -- R/mltools.R | 368 ++++++++++++++++++++++++++++---------------- R/oanda.R | 16 - R/switch.R | 17 -- README.md | 11 - build/vignette.rds |binary inst/doc/reference.R | 38 ++-- inst/doc/reference.Rmd | 68 +++++--- inst/doc/reference.html | 20 +- inst/doc/strategies.R | 30 +-- inst/doc/strategies.Rmd | 46 +++-- inst/doc/strategies.html | 7 inst/doc/utilities.R | 18 +- inst/doc/utilities.Rmd | 27 ++- inst/doc/utilities.html | 9 - inst/doc/xoanda.R | 28 +-- inst/doc/xoanda.Rmd | 54 ++++-- inst/doc/xoanda.html | 7 man/ichimoku-package.Rd | 15 + src/shikokuchuo.c | 46 ----- tests/testthat/test-oanda.R | 39 +++- vignettes/reference.Rmd | 68 +++++--- vignettes/strategies.Rmd | 46 +++-- vignettes/utilities.Rmd | 27 ++- vignettes/xoanda.Rmd | 54 ++++-- 30 files changed, 725 insertions(+), 482 deletions(-)
Title: Local Large Language Model Inference Engine
Description: Enables R users to run large language models locally using 'GGUF' model files
and the 'llama.cpp' inference engine. Provides a complete R interface for loading models,
generating text completions, extracting vector representations, and streaming responses in real-time.
Includes grammar-constrained generation for structured output, text classification,
and retrieval-augmented generation (RAG) pipelines. Supports local inference without
requiring cloud APIs or internet connectivity, ensuring complete data privacy and
control. Based on the 'llama.cpp' project by Georgi Gerganov (2023) <https://github.com/ggml-org/llama.cpp>.
Author: Pawan Rama Mali [aut, cre, cph],
Georgi Gerganov [aut, cph] ,
The ggml authors [cph] ,
Jeffrey Quesnelle [ctb, cph] ,
Bowen Peng [ctb, cph] ,
pi6am [ctb] ,
Ivan Yurchenko [ctb] ,
Dirk Eddelbuettel [ctb, rev]
Maintainer: Pawan Rama Mali <prm@outlook.in>
Diff between edgemodelr versions 0.2.0 dated 2026-02-25 and 0.4.1 dated 2026-05-26
edgemodelr-0.2.0/edgemodelr/src/llama/llama-sampling.cpp |only edgemodelr-0.2.0/edgemodelr/src/llama/llama-sampling.h |only edgemodelr-0.4.1/edgemodelr/DESCRIPTION | 17 edgemodelr-0.4.1/edgemodelr/MD5 | 352 edgemodelr-0.4.1/edgemodelr/NAMESPACE | 30 edgemodelr-0.4.1/edgemodelr/NEWS.md | 185 edgemodelr-0.4.1/edgemodelr/R/RcppExports.R | 36 edgemodelr-0.4.1/edgemodelr/R/api.R | 1758 + edgemodelr-0.4.1/edgemodelr/R/zzz.R | 21 edgemodelr-0.4.1/edgemodelr/inst/examples/08_rag_pipeline.R |only edgemodelr-0.4.1/edgemodelr/man/build_chat_prompt.Rd | 14 edgemodelr-0.4.1/edgemodelr/man/dot-compute_sha256.Rd | 36 edgemodelr-0.4.1/edgemodelr/man/dot-is_writable_dir.Rd | 24 edgemodelr-0.4.1/edgemodelr/man/dot-known_hashes_path.Rd | 24 edgemodelr-0.4.1/edgemodelr/man/edge_ask.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_cache_info.Rd | 34 edgemodelr-0.4.1/edgemodelr/man/edge_chat_completion.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_classify.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_completion.Rd | 30 edgemodelr-0.4.1/edgemodelr/man/edge_cuda_info.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_download_model.Rd | 62 edgemodelr-0.4.1/edgemodelr/man/edge_download_url.Rd | 44 edgemodelr-0.4.1/edgemodelr/man/edge_embeddings.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_extract.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_extract_batch.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_grammar_completion.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_index_documents.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_install_cuda.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_install_cuda_toolkit.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_json_grammar.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_load_model.Rd | 7 edgemodelr-0.4.1/edgemodelr/man/edge_map.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_model_n_embd.Rd |only edgemodelr-0.4.1/edgemodelr/man/edge_quick_setup.Rd | 42 edgemodelr-0.4.1/edgemodelr/man/edge_reload_cuda.Rd |only 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edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-backend.h | 23 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu.h | 8 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/amx |only edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/arch-fallback.h | 170 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/arch/x86/quants.c | 18 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/arch/x86/repack.cpp | 122 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/binary-ops.cpp | 8 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/common.h | 22 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/ggml-cpu-impl.h | 30 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/ggml-cpu.c | 518 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/ggml-cpu.cpp | 46 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/hbm.cpp |only edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/hbm.h |only edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/ops.cpp | 2873 + edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/ops.h | 21 edgemodelr-0.4.1/edgemodelr/src/ggml/ggml-cpu/repack.cpp | 1784 + 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edgemodelr-0.4.1/edgemodelr/src/llama/llama-arch.cpp | 4241 +- edgemodelr-0.4.1/edgemodelr/src/llama/llama-arch.h | 125 edgemodelr-0.4.1/edgemodelr/src/llama/llama-batch.cpp | 108 edgemodelr-0.4.1/edgemodelr/src/llama/llama-batch.h | 21 edgemodelr-0.4.1/edgemodelr/src/llama/llama-chat.cpp | 136 edgemodelr-0.4.1/edgemodelr/src/llama/llama-chat.h | 7 edgemodelr-0.4.1/edgemodelr/src/llama/llama-context.cpp | 1724 - edgemodelr-0.4.1/edgemodelr/src/llama/llama-context.h | 116 edgemodelr-0.4.1/edgemodelr/src/llama/llama-cparams.h | 6 edgemodelr-0.4.1/edgemodelr/src/llama/llama-cpp.h | 4 edgemodelr-0.4.1/edgemodelr/src/llama/llama-grammar.cpp | 366 edgemodelr-0.4.1/edgemodelr/src/llama/llama-grammar.h | 23 edgemodelr-0.4.1/edgemodelr/src/llama/llama-graph.cpp | 1124 edgemodelr-0.4.1/edgemodelr/src/llama/llama-graph.h | 280 edgemodelr-0.4.1/edgemodelr/src/llama/llama-hparams.cpp | 83 edgemodelr-0.4.1/edgemodelr/src/llama/llama-hparams.h | 152 edgemodelr-0.4.1/edgemodelr/src/llama/llama-impl.cpp | 26 edgemodelr-0.4.1/edgemodelr/src/llama/llama-impl.h | 19 edgemodelr-0.4.1/edgemodelr/src/llama/llama-kv-cache-iswa.cpp | 51 edgemodelr-0.4.1/edgemodelr/src/llama/llama-kv-cache-iswa.h | 8 edgemodelr-0.4.1/edgemodelr/src/llama/llama-kv-cache.cpp | 1129 edgemodelr-0.4.1/edgemodelr/src/llama/llama-kv-cache.h | 111 edgemodelr-0.4.1/edgemodelr/src/llama/llama-kv-cells.h | 82 edgemodelr-0.4.1/edgemodelr/src/llama/llama-memory-hybrid-iswa.cpp |only edgemodelr-0.4.1/edgemodelr/src/llama/llama-memory-hybrid-iswa.h |only edgemodelr-0.4.1/edgemodelr/src/llama/llama-memory-hybrid.cpp | 87 edgemodelr-0.4.1/edgemodelr/src/llama/llama-memory-hybrid.h | 42 edgemodelr-0.4.1/edgemodelr/src/llama/llama-memory-recurrent.cpp | 91 edgemodelr-0.4.1/edgemodelr/src/llama/llama-memory-recurrent.h | 25 edgemodelr-0.4.1/edgemodelr/src/llama/llama-memory.h | 13 edgemodelr-0.4.1/edgemodelr/src/llama/llama-mmap.cpp | 242 edgemodelr-0.4.1/edgemodelr/src/llama/llama-mmap.h | 11 edgemodelr-0.4.1/edgemodelr/src/llama/llama-model-loader.cpp | 117 edgemodelr-0.4.1/edgemodelr/src/llama/llama-model-loader.h | 6 edgemodelr-0.4.1/edgemodelr/src/llama/llama-model-saver.cpp | 4 edgemodelr-0.4.1/edgemodelr/src/llama/llama-model.cpp |15208 +--------- edgemodelr-0.4.1/edgemodelr/src/llama/llama-model.h | 112 edgemodelr-0.4.1/edgemodelr/src/llama/llama-quant.cpp | 406 edgemodelr-0.4.1/edgemodelr/src/llama/llama-sampler.cpp |only edgemodelr-0.4.1/edgemodelr/src/llama/llama-sampler.h |only edgemodelr-0.4.1/edgemodelr/src/llama/llama-vocab.cpp | 351 edgemodelr-0.4.1/edgemodelr/src/llama/llama-vocab.h | 89 edgemodelr-0.4.1/edgemodelr/src/llama/llama.cpp | 866 edgemodelr-0.4.1/edgemodelr/src/llama/llama.h | 396 edgemodelr-0.4.1/edgemodelr/src/llama/models |only edgemodelr-0.4.1/edgemodelr/src/llama/unicode.cpp | 329 edgemodelr-0.4.1/edgemodelr/src/llama/unicode.h | 44 edgemodelr-0.4.1/edgemodelr/tests/testthat/fake_model.gguf |only edgemodelr-0.4.1/edgemodelr/tests/testthat/test-model-aliases.R | 26 edgemodelr-0.4.1/edgemodelr/tests/testthat/test-model-management.R | 6 edgemodelr-0.4.1/edgemodelr/tests/testthat/test-streaming.R | 19 136 files changed, 22403 insertions(+), 19437 deletions(-)
Title: Wrapper for MUMPS Library
Description: Some basic features of 'MUMPS' (Multifrontal Massively Parallel
sparse direct Solver) are wrapped in a class whose methods can be used
for sequentially solving a sparse linear system (symmetric or not)
with one or many right hand sides (dense or sparse).
There is a possibility to do separately symbolic analysis,
LU (or LDL^t) factorization and system solving.
Third part ordering libraries are included and can be used: 'PORD', 'METIS', 'SCOTCH'.
'MUMPS' method was first described in Amestoy et al. (2001) <doi:10.1137/S0895479899358194>
and Amestoy et al. (2006) <doi:10.1016/j.parco.2005.07.004>.
Author: Serguei Sokol [aut, cre],
Emmanuel Agullo [ctb],
Patrick Amestoy [ctb, cph],
Maurice Bremond [ctb],
Alfredo Buttari [ctb],
Philippe Combes [ctb],
Marie Durand [ctb],
Aurelia Fevre [ctb],
Abdou Guermouche [ctb],
Guillaume Joslin [ctb],
Jacko Koster [c [...truncated...]
Maintainer: Serguei Sokol <sokol@insa-toulouse.fr>
Diff between rmumps versions 5.2.1-41 dated 2026-03-13 and 5.2.1-42 dated 2026-05-26
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS | 6 ++++++ src/init.c | 15 +++++++++++++++ 4 files changed, 27 insertions(+), 6 deletions(-)
Title: Nearest Neighbor Descent Method for Approximate Nearest
Neighbors
Description: The Nearest Neighbor Descent method for finding approximate
nearest neighbors by Dong and co-workers (2010)
<doi:10.1145/1963405.1963487>. Based on the 'Python' package
'PyNNDescent' <https://github.com/lmcinnes/pynndescent>.
Author: James Melville [aut, cre, cph],
Vitalie Spinu [ctb],
Ralf Stubner [ctb]
Maintainer: James Melville <jlmelville@gmail.com>
Diff between rnndescent versions 0.1.8 dated 2025-09-05 and 0.2.0 dated 2026-05-26
DESCRIPTION | 8 MD5 | 132 ++++++------- NEWS.md | 43 ++++ R/hubness.R | 10 - R/internals.R | 318 +++++++++++++++++++++++++++++++- R/rnndescent.R | 110 +++++++---- R/rptree.R | 32 ++- R/util.R | 18 + build/partial.rdb |binary build/vignette.rds |binary inst/doc/brute-force.html | 5 inst/doc/hubness.html | 71 +++---- inst/doc/metrics.Rmd | 6 inst/doc/metrics.html | 28 +- inst/doc/nearest-neighbor-descent.html | 12 - inst/doc/querying-data.Rmd | 2 inst/doc/querying-data.html | 23 +- inst/doc/random-partition-forests.html | 23 +- inst/doc/rnndescent.html | 20 +- inst/include/pforr.h | 112 ++++++++--- inst/include/tdoann/bitvec.h | 5 inst/include/tdoann/bruteforce.h | 13 - inst/include/tdoann/distance.h | 25 ++ inst/include/tdoann/nngraph.h | 21 ++ inst/include/tdoann/prepare.h | 7 inst/include/tdoann/randnbrs.h | 5 inst/include/tdoann/search.h | 4 inst/include/tdoann/sparse.h | 4 man/brute_force_knn.Rd | 3 man/brute_force_knn_query.Rd | 3 man/graph_knn_query.Rd | 3 man/nnd_knn.Rd | 3 man/prepare_search_graph.Rd | 3 man/random_knn.Rd | 3 man/random_knn_query.Rd | 3 man/rnnd_build.Rd | 3 man/rnnd_knn.Rd | 3 man/rnndescent-package.Rd | 5 man/rpf_build.Rd | 5 man/rpf_knn.Rd | 3 src/rnn_distance.h | 56 +++++ src/rnn_hub.cpp | 7 src/rnn_parallel.h | 1 src/rnn_progress.h | 34 +-- src/rnn_rptree.cpp | 43 +++- src/rnn_search.cpp | 9 src/rnn_util.h | 29 ++ tests/testthat/helper_nncheck.R | 17 - tests/testthat/test_binary.R | 20 +- tests/testthat/test_brute_force.R | 118 +++++++++-- tests/testthat/test_correlation.R | 26 +- tests/testthat/test_descent_bhamming.R | 14 - tests/testthat/test_descent_cosine.R | 36 +-- tests/testthat/test_descent_euclidean.R | 318 ++++++++++++++++++++++++++------ tests/testthat/test_descent_hamming.R | 18 - tests/testthat/test_descent_manhattan.R | 12 - tests/testthat/test_distance.R | 126 +++++++++--- tests/testthat/test_idx_to_graph.R | 68 +++++- tests/testthat/test_koccurrences.R | 31 ++- tests/testthat/test_merge.R | 66 +++++- tests/testthat/test_random_nbrs.R | 104 +++++++--- tests/testthat/test_rnnd.R | 77 +++++++ tests/testthat/test_rptree.R | 280 +++++++++++++++++++++++++--- tests/testthat/test_search_prep.R | 162 ++++++++++++++++ tests/testthat/test_sparse_search.R | 40 ++-- vignettes/metrics.Rmd | 6 vignettes/querying-data.Rmd | 2 67 files changed, 2229 insertions(+), 588 deletions(-)
Title: Parallel Numerical Derivatives, Gradients, Jacobians, and
Hessians of Arbitrary Accuracy Order
Description: Numerical derivatives through finite-difference approximations
can be calculated using the 'pnd' package with parallel capabilities and
optimal step-size selection to improve accuracy. These functions facilitate
efficient computation of derivatives, gradients, Jacobians, and Hessians,
allowing for more evaluations to reduce the mathematical and machine errors.
Designed for compatibility with the 'numDeriv' package,
which has not received updates in several years, it introduces advanced features
such as computing derivatives of arbitrary order, improving
the accuracy of Hessian approximations by avoiding repeated differencing,
and parallelising slow functions on Windows, Mac, and Linux.
Author: Andrei Victorovitch Kostyrka [aut, cre]
Maintainer: Andrei Victorovitch Kostyrka <andrei.kostyrka@gmail.com>
Diff between pnd versions 0.1.2 dated 2026-02-12 and 0.1.3 dated 2026-05-26
DESCRIPTION | 8 +-- MD5 | 26 +++++----- NEWS.md | 4 + R/gradient.R | 11 +++- R/zzz.R | 2 README.md | 1 build/partial.rdb |binary inst/CITATION | 16 +++--- inst/doc/compatibility-with-numDeriv.html | 23 ++++---- inst/doc/fast-and-accurate.html | 78 +++++++++++++++--------------- inst/doc/step-size-selection.html | 29 +++++------ man/Jacobian.Rd | 13 ----- tests/testthat/Rplots.pdf |binary tests/testthat/test-Jacobian.R | 8 +++ 14 files changed, 116 insertions(+), 103 deletions(-)
Title: A Comprehensive Toolkit for Clinical HLA Informatics
Description: A comprehensive toolkit for clinical Human Leukocyte Antigen (HLA) informatics, built on 'tidyverse' <https://tidyverse.tidyverse.org/> principles and making use of genotype list string (GL string, Mack et al. (2023) <doi:10.1111/tan.15126>) for storing and computing HLA genotype data. Specific functionalities include: coercion of HLA data in tabular format to and from GL string; calculation of matching and mismatching in all directions, with multiple output formats; automatic formatting of HLA data for searching within a GL string; truncation of molecular HLA data to a specific number of fields; and reading HLA genotypes in HML files and extracting the GL string. This library is intended for research use. Any application making use of this package in a clinical setting will need to be independently validated according to local regulations.
Author: Nicholas Brown [cre, aut] ,
Busra Coskun [aut]
Maintainer: Nicholas Brown <nicholas.brown@pennmedicine.upenn.edu>
Diff between immunogenetr versions 1.2.0 dated 2026-04-14 and 1.3.0 dated 2026-05-26
DESCRIPTION | 19 MD5 | 65 +- NAMESPACE | 31 - NEWS.md | 168 ++++-- R/GLstring_expand_longer.R | 137 ++++- R/GLstring_gene_copies_combine.R | 111 +++- R/GLstring_genes.R | 90 ++- R/GLstring_genes_expanded.R | 80 ++- R/HLA_columns_to_GLstring.R | 343 ++++++++----- R/HLA_match_number.R | 63 +- R/HLA_match_summary_HCT.R | 187 +++---- R/HLA_mismatch_base.R | 257 +++++----- R/HLA_mismatch_logical.R | 121 ++-- R/HLA_mismatch_number.R | 203 ++++---- R/HLA_mismatched_alleles.R | 43 - R/HLA_prefix_remove.R | 61 +- R/HLA_truncate.R | 218 +++++--- R/ambiguity_table_to_GLstring.R | 184 ++++++- R/read_HML.R | 3 R/utils-validation.R | 33 + README.md | 152 +++--- build/partial.rdb |binary build/vignette.rds |binary inst/doc/immunogenetr.R | 16 inst/doc/immunogenetr.Rmd | 20 inst/doc/immunogenetr.html | 554 +++++++++++++++------- man/HLA_columns_to_GLstring.Rd | 14 man/immunogenetr-package.Rd | 2 tests/testthat/test-GLstring_genes.R | 23 tests/testthat/test-HLA_columns_to_GLstring.R | 38 + tests/testthat/test-ambiguity_table_to_GLstring.R | 30 + tests/testthat/test-round_trip.R |only tests/testthat/test-validation.R | 50 + vignettes/immunogenetr.Rmd | 20 34 files changed, 2204 insertions(+), 1132 deletions(-)
Title: Interactive Structural Equation Modeling (SEM) and Multi-Group
Path Diagrams
Description: Provides an interactive workflow for visualizing structural equation modeling (SEM), multi-group path diagrams, and network diagrams in R. Users can directly manipulate nodes and edges to create publication-quality figures while maintaining statistical model integrity. Supports integration with 'lavaan', 'OpenMx', 'tidySEM', and 'blavaan' etc. Features include parameter-based aesthetic mapping, generative AI assistance, and complete reproducibility by exporting metadata for script-based workflows.
Author: Seung Hyun Min [aut, cre]
Maintainer: Seung Hyun Min <seung.min@mail.mcgill.ca>
Diff between ggsem versions 0.9.9 dated 2026-01-28 and 1.0.0 dated 2026-05-26
DESCRIPTION | 6 - MD5 | 14 +-- R/create_bundle.R | 10 +- R/ggsem_app.R | 12 +-- R/reproduce_metadata.R | 12 +-- R/utils_model.R | 99 +++++++++++++++++-------- README.md | 4 - inst/shiny/app.R | 193 ++++++++++++++++++++++++++++++++++++------------- 8 files changed, 242 insertions(+), 108 deletions(-)
Title: Unidimensional and Multidimensional Methods for Recurrence
Quantification Analysis
Description: Auto, Cross and Multi-dimensional recurrence quantification analysis.
Different methods for computing recurrence, cross vs. multidimensional
or profile iti.e., only looking at the diagonal recurrent points,
as well as functions for optimization and plotting are proposed.
in-depth measures of the whole cross-recurrence plot,
Please refer to Coco and others (2021) <doi:10.32614/RJ-2021-062>,
Coco and Dale (2014) <doi:10.3389/fpsyg.2014.00510>
and Wallot (2018) <doi: 10.1080/00273171.2018.1512846>
for further details about the method.
Author: Moreno I. Coco [cre, aut],
Dan Moenster [aut],
Giuseppe Leonardi [aut],
Rick Dale [aut],
Sebastian Wallot [aut],
James D. Dixon [ctb],
John C. Nash [ctb],
Alexandra Paxton [ctb],
Polyphony Bruna [ctb]
Maintainer: Moreno I. Coco <moreno.cocoi@gmail.com>
Diff between crqa versions 2.0.7 dated 2025-06-25 and 2.1.0 dated 2026-05-26
crqa-2.0.7/crqa/src/init.c |only crqa-2.0.7/crqa/src/jspd.f90 |only crqa-2.1.0/crqa/DESCRIPTION | 31 crqa-2.1.0/crqa/MD5 | 64 crqa-2.1.0/crqa/NAMESPACE | 11 crqa-2.1.0/crqa/R/RcppExports.R |only crqa-2.1.0/crqa/R/aRQA.R |only crqa-2.1.0/crqa/R/crqa.R | 416 ++++-- crqa-2.1.0/crqa/R/crqa_helpers.R | 1365 ++++++++++++--------- crqa-2.1.0/crqa/R/drpfromts.R | 148 +- crqa-2.1.0/crqa/R/optimizeParam.R | 52 crqa-2.1.0/crqa/R/piecewiseRQA.R | 380 ++--- crqa-2.1.0/crqa/R/plot_rp.R | 11 crqa-2.1.0/crqa/R/rosslerattractor.R |only crqa-2.1.0/crqa/R/spdiags.R | 61 crqa-2.1.0/crqa/R/wincrqa.R | 230 +-- crqa-2.1.0/crqa/R/windowdrp.R | 208 +-- crqa-2.1.0/crqa/build/vignette.rds |binary crqa-2.1.0/crqa/inst/doc/crqa_tutorial.R | 193 ++ crqa-2.1.0/crqa/inst/doc/crqa_tutorial.Rmd | 540 ++++++-- crqa-2.1.0/crqa/inst/doc/crqa_tutorial.html | 702 +++++++++- crqa-2.1.0/crqa/man/aRQA.Rd |only crqa-2.1.0/crqa/man/crqa-package.Rd | 134 +- crqa-2.1.0/crqa/man/crqa.Rd | 242 ++- crqa-2.1.0/crqa/man/drpfromts.Rd | 17 crqa-2.1.0/crqa/man/figures |only crqa-2.1.0/crqa/man/lorenzattractor.Rd | 5 crqa-2.1.0/crqa/man/optimizeParam.Rd | 298 ++-- crqa-2.1.0/crqa/man/piecewiseRQA.Rd | 265 ++-- crqa-2.1.0/crqa/man/rosslerattractor.Rd |only crqa-2.1.0/crqa/man/spdiags.Rd | 20 crqa-2.1.0/crqa/man/theiler_exclusion.Rd |only crqa-2.1.0/crqa/man/wincrqa.Rd | 299 ++-- crqa-2.1.0/crqa/man/windowdrp.Rd | 270 ++-- crqa-2.1.0/crqa/src/Makevars |only crqa-2.1.0/crqa/src/Makevars.win |only crqa-2.1.0/crqa/src/RcppExports.cpp |only crqa-2.1.0/crqa/src/crqa_fused.cpp |only crqa-2.1.0/crqa/vignettes/crqa_tutorial.Rmd | 540 ++++++-- crqa-2.1.0/crqa/vignettes/figure3_speed_memory.png |only 40 files changed, 4177 insertions(+), 2325 deletions(-)
Title: Reliable Comparison of Floating Point Numbers
Description: Comparisons of floating point numbers are problematic due to errors
associated with the binary representation of decimal numbers.
Despite being aware of these problems, people still use numerical methods
that fail to account for these and other rounding errors (this pitfall is
the first to be highlighted in Circle 1 of Burns (2012)
'The R Inferno' <https://www.burns-stat.com/pages/Tutor/R_inferno.pdf>).
This package provides new relational operators useful for performing
floating point number comparisons with a set tolerance.
Author: Alex M Chubaty [aut, cre] ,
His Majesty the King in Right of Canada, as represented by the Minister
of Natural Resources Canada [cph]
Maintainer: Alex M Chubaty <achubaty@for-cast.ca>
Diff between fpCompare versions 0.2.4 dated 2022-08-15 and 0.2.6 dated 2026-05-26
fpCompare-0.2.4/fpCompare/tests/test-all.R |only fpCompare-0.2.6/fpCompare/DESCRIPTION | 38 +- fpCompare-0.2.6/fpCompare/MD5 | 32 - fpCompare-0.2.6/fpCompare/NEWS.md | 36 + fpCompare-0.2.6/fpCompare/R/fpCompare-package.R |only fpCompare-0.2.6/fpCompare/R/fpCompare.R | 57 +-- fpCompare-0.2.6/fpCompare/R/zzz.R | 2 fpCompare-0.2.6/fpCompare/README.md | 64 +-- fpCompare-0.2.6/fpCompare/build/vignette.rds |binary fpCompare-0.2.6/fpCompare/inst/CITATION |only fpCompare-0.2.6/fpCompare/inst/WORDLIST | 5 fpCompare-0.2.6/fpCompare/inst/doc/fpCompare.R |only fpCompare-0.2.6/fpCompare/inst/doc/fpCompare.Rmd | 43 +- fpCompare-0.2.6/fpCompare/inst/doc/fpCompare.html | 187 +++++----- fpCompare-0.2.6/fpCompare/inst/examples/examples.R | 6 fpCompare-0.2.6/fpCompare/man/fpCompare-package.Rd |only fpCompare-0.2.6/fpCompare/man/relational-operators.Rd | 38 -- fpCompare-0.2.6/fpCompare/tests/testthat.R |only fpCompare-0.2.6/fpCompare/tests/testthat/test-numerical-comparisons.R | 73 ++- fpCompare-0.2.6/fpCompare/vignettes/fpCompare.Rmd | 43 +- 20 files changed, 358 insertions(+), 266 deletions(-)