Title: Monte Carlo Confidence Intervals in Structural Equation Modeling
Description: Monte Carlo confidence intervals for free and defined parameters
in models fitted in the structural equation modeling package 'lavaan'
can be generated using the 'semmcci' package.
'semmcci' has three main functions, namely, MC(), MCMI(), and MCStd().
The output of 'lavaan' is passed as the first argument
to the MC() function or the MCMI() function to generate Monte Carlo confidence intervals.
Monte Carlo confidence intervals for the standardized estimates
can also be generated by passing the output of the MC() function or the MCMI() function
to the MCStd() function.
A description of the package and code examples
are presented in Pesigan and Cheung (2024) <doi:10.3758/s13428-023-02114-4>.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph] ,
Shu Fai Cheung [ctb]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between semmcci versions 1.1.5 dated 2025-10-19 and 1.1.6 dated 2026-06-11
semmcci-1.1.5/semmcci/tests/testthat/test-semmcci.R |only semmcci-1.1.6/semmcci/DESCRIPTION | 8 - semmcci-1.1.6/semmcci/LICENSE | 2 semmcci-1.1.6/semmcci/MD5 | 41 ++++------ semmcci-1.1.6/semmcci/NEWS.md | 6 + semmcci-1.1.6/semmcci/R/lavHelper-std-lav-dot.R | 2 semmcci-1.1.6/semmcci/R/miHelper-ariv-dot.R | 2 semmcci-1.1.6/semmcci/R/miHelper-mi-combine-dot.R | 2 semmcci-1.1.6/semmcci/R/miHelper-total-adj-dot.R | 2 semmcci-1.1.6/semmcci/R/semmcci-func.R | 2 semmcci-1.1.6/semmcci/R/semmcci-mc-func.R | 2 semmcci-1.1.6/semmcci/R/semmcci-mc-generic.R | 2 semmcci-1.1.6/semmcci/R/semmcci-mc.R | 2 semmcci-1.1.6/semmcci/build/partial.rdb |binary semmcci-1.1.6/semmcci/man/Func.Rd | 14 +-- semmcci-1.1.6/semmcci/man/MC.Rd | 14 +-- semmcci-1.1.6/semmcci/man/MCFunc.Rd | 14 +-- semmcci-1.1.6/semmcci/man/MCGeneric.Rd | 14 +-- semmcci-1.1.6/semmcci/man/MCMI.Rd | 12 +- semmcci-1.1.6/semmcci/man/MCStd.Rd | 12 +- semmcci-1.1.6/semmcci/man/semmcci-package.Rd | 5 + semmcci-1.1.6/semmcci/tests/testthat/test-semmcci-mc-moment.R | 2 22 files changed, 85 insertions(+), 75 deletions(-)
Title: Columnar Query Engine for Larger-than-RAM Data
Description: A minimal columnar query engine with lazy execution on datasets
larger than RAM. Provides 'dplyr'-like verbs (filter(), select(), mutate(),
group_by(), summarise(), joins, window functions) and common aggregations
(n(), sum(), mean(), min(), max(), sd(), first(), last()) backed by a
pure C11 pull-based execution engine and a custom on-disk format ('.vtr').
Reads and writes 'GeoTIFF' (including tiled and 'BigTIFF' layouts) and a
tiled raster format ('.vec') with overview pyramids and time cubes for
larger-than-RAM raster data.
Author: Gilles Colling [aut, cre, cph]
Maintainer: Gilles Colling <gilles.colling051@gmail.com>
Diff between vectra versions 0.6.2 dated 2026-05-08 and 0.7.1 dated 2026-06-11
DESCRIPTION | 12 MD5 | 66 +++-- NAMESPACE | 12 NEWS.md | 70 +++++ R/chunk.R |only R/explain.R | 2 R/offload.R |only R/print.R | 1 R/verbs_grouping.R | 13 - README.md | 437 +++++++++++++++++++--------------- build/vignette.rds |binary inst/doc/engine.html | 4 inst/doc/formats.html | 8 inst/doc/indexing.html | 130 ++++++++-- inst/doc/joins.html | 4 inst/doc/large-data.html | 12 inst/doc/offload.R |only inst/doc/offload.Rmd |only inst/doc/offload.html |only inst/doc/quickstart.html | 20 + inst/doc/schema.html | 4 inst/doc/sdm.R |only inst/doc/sdm.Rmd |only inst/doc/sdm.html |only inst/doc/string-ops.html | 4 man/chunk_feeder.Rd |only man/collect_chunked.Rd |only man/group_map.Rd |only man/offload.Rd |only src/collect.c | 58 ++++ src/collect.h | 6 src/fuzzy_join.c | 5 src/init.c | 4 src/r_bridge.c | 18 + src/r_bridge.h | 2 src/tdc/VENDORED_FROM | 2 src/vec_omp.h | 21 + tests/testthat/test-collect-chunked.R |only tests/testthat/test-groupby.R | 23 + tests/testthat/test-offload.R |only vignettes/offload.Rmd |only vignettes/sdm.Rmd |only 42 files changed, 675 insertions(+), 263 deletions(-)
Title: Safely Access the RStudio API
Description: Access the RStudio API (if available) and provide informative error
messages when it's not.
Author: Kevin Ushey [aut, cre],
JJ Allaire [aut],
Hadley Wickham [aut],
Gary Ritchie [aut],
RStudio [cph]
Maintainer: Kevin Ushey <kevin@rstudio.com>
Diff between rstudioapi versions 0.18.0 dated 2026-01-16 and 0.19.0 dated 2026-06-11
DESCRIPTION | 10 +- MD5 | 63 +++++++------ NAMESPACE | 1 NEWS.md | 19 ++++ R/auth.R | 168 +++++++++++++++++++++++++++++++++---- R/code.R | 14 ++- R/document-api.R | 76 ++++++++++++++++ build/vignette.rds |binary man/getDelegatedAzureToken.Rd | 24 ++++- man/jobAdd.Rd | 20 ++-- man/jobAddOutput.Rd | 20 ++-- man/jobAddProgress.Rd | 20 ++-- man/jobGetState.Rd | 20 ++-- man/jobList.Rd | 20 ++-- man/jobRemove.Rd | 20 ++-- man/jobRunScript.Rd | 20 ++-- man/jobSetProgress.Rd | 20 ++-- man/jobSetState.Rd | 20 ++-- man/jobSetStatus.Rd | 20 ++-- man/launcherAvailable.Rd | 26 ++--- man/launcherConfig.Rd | 26 ++--- man/launcherContainer.Rd | 26 ++--- man/launcherControlJob.Rd | 26 ++--- man/launcherGetInfo.Rd | 26 ++--- man/launcherGetJob.Rd | 26 ++--- man/launcherGetJobs.Rd | 26 ++--- man/launcherHostMount.Rd | 26 ++--- man/launcherNfsMount.Rd | 26 ++--- man/launcherPlacementConstraint.Rd | 26 ++--- man/launcherResourceLimit.Rd | 26 ++--- man/launcherSubmitJob.Rd | 26 ++--- man/launcherSubmitR.Rd | 26 ++--- man/showEditSuggestion.Rd |only 33 files changed, 588 insertions(+), 325 deletions(-)
Title: R-Friendly Threading in C++
Description: Provides a C++11-style thread class and thread pool that can safely
be interrupted from R. See Nagler (2021) <doi:10.18637/jss.v097.c01>.
Author: Thomas Nagler [aut, cre]
Maintainer: Thomas Nagler <mail@tnagler.com>
Diff between RcppThread versions 2.3.0 dated 2026-01-16 and 2.4.0 dated 2026-06-11
DESCRIPTION | 8 MD5 | 14 - NEWS.md | 4 README.md | 4 build/partial.rdb |binary build/vignette.rds |binary inst/include/RcppThread/quickpool.hpp | 355 ++++++++++++++++++++++++++-------- man/RcppThread.Rd | 5 8 files changed, 295 insertions(+), 95 deletions(-)
Title: Bootstrap for Regression Effect Sizes
Description: Generates nonparametric bootstrap confidence intervals
(Efron and Tibshirani, 1993: <doi:10.1201/9780429246593>)
for standardized regression coefficients (beta) and other effect sizes,
including multiple correlation, semipartial correlations,
improvement in R-squared, squared partial correlations,
and differences in standardized regression coefficients,
for models fitted by lm().
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaNB versions 1.0.6 dated 2025-10-19 and 1.0.7 dated 2026-06-11
DESCRIPTION | 10 +++++----- LICENSE | 2 +- MD5 | 28 ++++++++++++++-------------- NEWS.md | 6 ++++++ R/betaNB-methods-beta-nb.R | 6 ++---- build/partial.rdb |binary data/nas1982.rda |binary man/BetaNB.Rd | 14 +++++++------- man/DeltaRSqNB.Rd | 14 +++++++------- man/DiffBetaNB.Rd | 14 +++++++------- man/NB.Rd | 14 +++++++------- man/PCorNB.Rd | 14 +++++++------- man/RSqNB.Rd | 14 +++++++------- man/SCorNB.Rd | 14 +++++++------- man/betaNB-package.Rd | 5 +++++ 15 files changed, 82 insertions(+), 73 deletions(-)
Title: Monte Carlo for Regression Effect Sizes
Description: Generates Monte Carlo confidence intervals
for standardized regression coefficients (beta) and other effect sizes,
including multiple correlation, semipartial correlations,
improvement in R-squared, squared partial correlations,
and differences in standardized regression coefficients,
for models fitted by lm().
'betaMC' combines ideas from Monte Carlo confidence intervals for the indirect effect
(Pesigan and Cheung, 2024 <doi:10.3758/s13428-023-02114-4>)
and the sampling covariance matrix of regression coefficients
(Dudgeon, 2017 <doi:10.1007/s11336-017-9563-z>)
to generate confidence intervals effect sizes in regression.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaMC versions 1.3.3 dated 2025-10-19 and 1.3.4 dated 2026-06-11
DESCRIPTION | 11 ++++++----- LICENSE | 2 +- MD5 | 30 +++++++++++++++--------------- NEWS.md | 6 ++++++ R/betaMC-methods-beta-mc.R | 6 ++---- build/partial.rdb |binary data/nas1982.rda |binary man/BetaMC.Rd | 16 ++++++++-------- man/DeltaRSqMC.Rd | 16 ++++++++-------- man/DiffBetaMC.Rd | 16 ++++++++-------- man/MC.Rd | 16 ++++++++-------- man/MCMI.Rd | 16 ++++++++-------- man/PCorMC.Rd | 16 ++++++++-------- man/RSqMC.Rd | 16 ++++++++-------- man/SCorMC.Rd | 16 ++++++++-------- man/betaMC-package.Rd | 5 +++++ 16 files changed, 99 insertions(+), 89 deletions(-)
Title: Functions to Streamline Statistical Analysis and Reporting
Description: Built upon popular R packages such as 'ggstatsplot' and 'ARTool', this collection offers a wide array of tools for simplifying reproducible analyses, generating high-quality visualizations, and producing 'APA'-compliant outputs. The primary goal of this package is to significantly reduce repetitive coding efforts, allowing you to focus on interpreting results. Whether you're dealing with ANOVA assumptions, reporting effect sizes, or creating publication-ready visualizations, this package makes these tasks easier.
Author: Mark Colley [aut, cre, cph]
Maintainer: Mark Colley <mark.colley@yahoo.de>
Diff between colleyRstats versions 0.0.4 dated 2026-05-03 and 0.1.0 dated 2026-06-11
colleyRstats-0.0.4/colleyRstats/inst/WORDLIST.txt |only colleyRstats-0.1.0/colleyRstats/DESCRIPTION | 29 colleyRstats-0.1.0/colleyRstats/MD5 | 82 colleyRstats-0.1.0/colleyRstats/NAMESPACE | 35 colleyRstats-0.1.0/colleyRstats/NEWS.md | 57 colleyRstats-0.1.0/colleyRstats/R/globals.R | 10 colleyRstats-0.1.0/colleyRstats/R/imports.R | 36 colleyRstats-0.1.0/colleyRstats/R/paper.R |only colleyRstats-0.1.0/colleyRstats/R/pipeline.R |only colleyRstats-0.1.0/colleyRstats/R/plotting.R | 154 colleyRstats-0.1.0/colleyRstats/R/reporting.R | 2618 ++++++---- colleyRstats-0.1.0/colleyRstats/R/utils.R | 363 - colleyRstats-0.1.0/colleyRstats/R/zzz-aliases.R |only colleyRstats-0.1.0/colleyRstats/inst/WORDLIST | 340 - colleyRstats-0.1.0/colleyRstats/inst/doc/getting-started.html | 18 colleyRstats-0.1.0/colleyRstats/man/add_pareto_emoa_column.Rd | 4 colleyRstats-0.1.0/colleyRstats/man/add_pareto_moocore_column.Rd |only colleyRstats-0.1.0/colleyRstats/man/analyze_and_report.Rd |only colleyRstats-0.1.0/colleyRstats/man/assumption_methods_text.Rd |only colleyRstats-0.1.0/colleyRstats/man/checkAssumptionsForAnova.Rd | 5 colleyRstats-0.1.0/colleyRstats/man/check_homogeneity_by_group.Rd | 5 colleyRstats-0.1.0/colleyRstats/man/check_normality_by_group.Rd | 10 colleyRstats-0.1.0/colleyRstats/man/cite_methods.Rd |only colleyRstats-0.1.0/colleyRstats/man/generateEffectPlot.Rd | 20 colleyRstats-0.1.0/colleyRstats/man/generateMoboPlot.Rd | 15 colleyRstats-0.1.0/colleyRstats/man/generateMoboPlot2.Rd | 19 colleyRstats-0.1.0/colleyRstats/man/ggbetweenstatsWithPriorNormalityCheck.Rd | 13 colleyRstats-0.1.0/colleyRstats/man/ggbetweenstatsWithPriorNormalityCheckAsterisk.Rd | 5 colleyRstats-0.1.0/colleyRstats/man/ggwithinstatsWithPriorNormalityCheck.Rd | 13 colleyRstats-0.1.0/colleyRstats/man/ggwithinstatsWithPriorNormalityCheckAsterisk.Rd | 5 colleyRstats-0.1.0/colleyRstats/man/latex_preamble.Rd |only colleyRstats-0.1.0/colleyRstats/man/remove_outliers_REI.Rd | 12 colleyRstats-0.1.0/colleyRstats/man/reportART.Rd | 23 colleyRstats-0.1.0/colleyRstats/man/reportArtCon.Rd |only colleyRstats-0.1.0/colleyRstats/man/reportArtConTable.Rd |only colleyRstats-0.1.0/colleyRstats/man/reportDunnTest.Rd | 13 colleyRstats-0.1.0/colleyRstats/man/reportDunnTestTable.Rd | 26 colleyRstats-0.1.0/colleyRstats/man/reportMeanAndSD.Rd | 13 colleyRstats-0.1.0/colleyRstats/man/reportNPAV.Rd | 15 colleyRstats-0.1.0/colleyRstats/man/reportNparLD.Rd | 24 colleyRstats-0.1.0/colleyRstats/man/report_all.Rd |only colleyRstats-0.1.0/colleyRstats/man/reportggstatsplot.Rd | 20 colleyRstats-0.1.0/colleyRstats/man/reportggstatsplotPostHoc.Rd | 21 colleyRstats-0.1.0/colleyRstats/man/reshape_data.Rd | 1 colleyRstats-0.1.0/colleyRstats/man/save_paper_figure.Rd |only colleyRstats-0.1.0/colleyRstats/tests/testthat/test-paper.R |only colleyRstats-0.1.0/colleyRstats/tests/testthat/test-plotting.R | 15 colleyRstats-0.1.0/colleyRstats/tests/testthat/test-reporting.R | 172 colleyRstats-0.1.0/colleyRstats/tests/testthat/test-utils.R | 116 49 files changed, 2811 insertions(+), 1516 deletions(-)
Title: Robust Confidence Intervals for Standardized Regression
Coefficients
Description: Generates robust confidence intervals for standardized regression coefficients
using heteroskedasticity-consistent standard errors for models fitted by lm()
as described in Dudgeon (2017) <doi:10.1007/s11336-017-9563-z>.
The package can also be used to generate confidence intervals for R-squared,
adjusted R-squared, and differences of standardized regression coefficients.
A description of the package and code examples
are presented in Pesigan, Sun, and Cheung (2023) <doi:10.1080/00273171.2023.2201277>.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaSandwich versions 1.0.8 dated 2025-10-19 and 1.0.9 dated 2026-06-11
DESCRIPTION | 10 ++++----- LICENSE | 2 - MD5 | 30 ++++++++++++++-------------- NEWS.md | 6 +++++ R/betaSandwich-beta-adf.R | 4 +-- R/betaSandwich-beta-hc.R | 2 - R/betaSandwich-beta-mvn.R | 2 - R/betaSandwich-methods-diff-beta-sandwich.R | 4 +-- build/partial.rdb |binary data/nas1982.rda |binary man/BetaADF.Rd | 14 ++++++------- man/BetaHC.Rd | 12 +++++------ man/BetaN.Rd | 12 +++++------ man/DiffBetaSandwich.Rd | 10 ++++----- man/RSqBetaSandwich.Rd | 10 ++++----- man/betaSandwich-package.Rd | 5 ++++ 16 files changed, 67 insertions(+), 56 deletions(-)
Title: Confidence Intervals for Standardized Regression Coefficients
Description: Generates confidence intervals for standardized regression coefficients
using delta method standard errors for models fitted by lm()
as described in Yuan and Chan (2011) <doi:10.1007/s11336-011-9224-6>
and Jones and Waller (2015) <doi:10.1007/s11336-013-9380-y>.
The package can also be used to generate confidence intervals for
differences of standardized regression coefficients
and as a general approach to performing the delta method.
A description of the package and code examples
are presented in Pesigan, Sun, and Cheung (2023) <doi:10.1080/00273171.2023.2201277>.
Author: Ivan Jacob Agaloos Pesigan [aut, cre, cph]
Maintainer: Ivan Jacob Agaloos Pesigan <r.jeksterslab@gmail.com>
Diff between betaDelta versions 1.0.6 dated 2025-10-19 and 1.0.7 dated 2026-06-11
DESCRIPTION | 10 +++++----- LICENSE | 2 +- MD5 | 30 +++++++++++++++--------------- NEWS.md | 6 ++++++ R/betaDelta-beta-delta-dot.R | 4 ++-- R/betaDelta-beta-delta.R | 4 ++-- R/betaDelta-methods-beta-delta.R | 4 ++-- R/betaDelta-methods-diff-beta-delta.R | 4 ++-- R/deltaMethod-methods.R | 4 ++-- build/partial.rdb |binary data/nas1982.rda |binary man/BetaDelta.Rd | 8 ++++---- man/Delta.Rd | 4 ++-- man/DeltaGeneric.Rd | 4 ++-- man/DiffBetaDelta.Rd | 4 ++-- man/betaDelta-package.Rd | 5 +++++ 16 files changed, 52 insertions(+), 41 deletions(-)
Title: Survey Standard Error Estimation for Cumulated Estimates and
their Differences in Complex Panel Designs
Description: Calculate point estimates and their standard errors in complex household surveys using bootstrap replicates. Bootstrapping considers survey design with a rotating panel. A comprehensive description of the methodology can be found under <https://statistikat.github.io/surveysd/articles/methodology.html>.
Author: Johannes Gussenbauer [aut, cre],
Alexander Kowarik [aut] ,
Eileen Vattheuer [aut],
Gregor de Cillia [aut],
Matthias Till [ctb]
Maintainer: Johannes Gussenbauer <Johannes.Gussenbauer@statistik.gv.at>
Diff between surveysd versions 2.0.2 dated 2026-04-27 and 2.0.3 dated 2026-06-11
DESCRIPTION | 6 MD5 | 50 +-- R/calc.stError.R | 8 inst/doc/error_estimation.R | 3 inst/doc/error_estimation.Rmd | 4 inst/doc/error_estimation.html | 546 +++++++++++++++++++------------------- inst/doc/ipf.R | 3 inst/doc/ipf.Rmd | 3 inst/doc/ipf.html | 28 - inst/doc/methodology.R | 3 inst/doc/methodology.Rmd | 3 inst/doc/methodology.html | 16 - inst/doc/raowu.R | 3 inst/doc/raowu.Rmd | 3 inst/doc/raowu.html | 7 inst/doc/surveysd.R | 3 inst/doc/surveysd.Rmd | 3 tests/testthat.R | 3 tests/testthat/Rplots.pdf |binary tests/testthat/test_calcstError.R | 374 ++++++++++++++++++++------ vignettes/error_estimation.Rmd | 4 vignettes/ipf.Rmd | 3 vignettes/methodology.Rmd | 3 vignettes/raowu.Rmd | 3 vignettes/surveysd.Rmd | 3 vignettes/surveysd.html | 68 ++-- 26 files changed, 700 insertions(+), 453 deletions(-)
Title: Robust Trend-Cycle Decomposition for Macroeconomic Time Series
Description: Provides high-performance tools for macroeconomic trend
extraction and filtering, specifically designed to solve the end-point
problem in real-time. Implements the MacroBoost Hybrid (MBH) filter
using penalized P-splines and gradient boosting. Unlike the standard
Hodrick-Prescott filter, 'MacroFilters' utilizes component-wise
L2-boosting with robust loss functions (Huber) to handle extreme
transient shocks (e.g., COVID-19) without inducing spurious trend
shifts. The algorithm includes an automated two-layer diagnostic stage
for unit roots and structural breaks, optimized via corrected AICc for
computational efficiency. Methodology detailed in Kinel (2026)
<doi:10.2139/ssrn.6371138>.
Author: Michal Kinel [aut, cre]
Maintainer: Michal Kinel <michal.kinel@gmail.com>
Diff between MacroFilters versions 0.1.0 dated 2026-05-27 and 0.2.1 dated 2026-06-11
DESCRIPTION | 17 +- MD5 | 72 ++++++--- NAMESPACE | 19 ++ NEWS.md |only R/00_class_system.R | 4 R/02_algo_hp.R | 42 ++++- R/03_algo_hamilton.R | 66 +++++++-- R/04_algo_bhp.R | 64 ++++++-- R/05_algo_mbh.R | 176 ++++++++++++++++-------- R/autoplot.R |only R/data.R | 64 ++++++++ R/internals.R |only R/zzz.R |only README.md | 23 ++- build/vignette.rds |binary data/es_gdp.rda |only data/fr_gdp.rda |only inst/CITATION | 15 +- inst/doc/introduction.R | 93 ++++++------ inst/doc/introduction.Rmd | 123 +++++++++------- inst/doc/introduction.html | 276 ++++++++++++++++++++++---------------- inst/doc/real_time_revisions.R | 2 inst/doc/real_time_revisions.Rmd | 7 inst/doc/real_time_revisions.html | 54 +++---- inst/doc/tuning_mbh.R | 26 ++- inst/doc/tuning_mbh.Rmd | 37 +++-- inst/doc/tuning_mbh.html | 138 ++++++++++--------- inst/doc/uncertainty_bands.R |only inst/doc/uncertainty_bands.Rmd |only inst/doc/uncertainty_bands.html |only man/autoplot.macrofilter.Rd |only man/bhp_filter.Rd | 29 +++ man/es_gdp.Rd |only man/fr_gdp.Rd |only man/hamilton_filter.Rd | 37 ++++- man/hp_filter.Rd | 25 ++- man/mbh_filter.Rd | 103 +++++++++----- man/reexports.Rd |only tests/testthat/test-autoplot.R |only tests/testthat/test-bootstrap.R |only tests/testthat/test-mbh_filter.R | 24 +++ vignettes/introduction.Rmd | 123 +++++++++------- vignettes/real_time_revisions.Rmd | 7 vignettes/tuning_mbh.Rmd | 37 +++-- vignettes/uncertainty_bands.Rmd |only 45 files changed, 1142 insertions(+), 561 deletions(-)
Title: Parametric Mortality Curve Fitting and Mortality Forecasting
Tools
Description: Provides tools for fitting parametric mortality curves. Implements multiple optimisation strategies to enhance robustness and stability of parameter estimation. Offers tools for forecasting mortality rates guided by mortality curves.
For modelling details see:
Tabeau (2001) <doi:10.1007/0-306-47562-6_1>,
Renshaw and Haberman (2006) <doi:10.1016/j.insmatheco.2005.12.001>,
Cairns et al. (2009) <doi:10.1080/10920277.2009.10597538>,
Li and Lee (2005) <doi: 10.1353/dem.2005.0021>.
Author: Jackie Li [aut, cre, cph]
Maintainer: Jackie Li <jackieli@smu.edu.sg>
Diff between demofit versions 0.1.3 dated 2026-04-28 and 0.1.4 dated 2026-06-11
DESCRIPTION | 6 +-- MD5 | 82 +++++++++++++++++++++++++++++++------------------- NAMESPACE | 51 +++++++++++++++++++++++++++++++ NEWS | 7 +++- R/APCS.R | 16 +++++---- R/CAES.R | 22 +++++++------ R/CBDCS.R | 16 +++++---- R/CBDQCS.R | 18 ++++++---- R/CBDS.R | 14 ++++---- R/CFM2S.R | 26 ++++++++------- R/CFMS.R | 28 +++++++++-------- R/ENI.R | 4 +- R/ENS.R | 6 ++- R/LCLS.R |only R/LCS.R | 16 +++++---- R/PAPCS.R |only R/PCAES.R |only R/PCBDCS.R |only R/PCBDQCS.R |only R/PCBDS.R |only R/PCFM2S.R |only R/PCFMS.R |only R/PLCS.R |only R/PRHS.R |only R/RHS.R | 18 ++++++---- R/STARS.R | 10 +++--- R/modelS3.R | 49 +++++++++++++++++++++++++++-- inst/CITATION | 2 - inst/doc/demofit.Rmd | 8 ++-- inst/doc/demofit.html | 21 ++++++------ man/APCS.Rd | 2 - man/CAES.Rd | 2 - man/CBDCS.Rd | 2 - man/CBDQCS.Rd | 2 - man/CBDS.Rd | 2 - man/CFM2S.Rd | 2 - man/CFMS.Rd | 2 - man/LCLS.Rd |only man/LCS.Rd | 2 - man/PAPCS.Rd |only man/PCAES.Rd |only man/PCBDCS.Rd |only man/PCBDQCS.Rd |only man/PCBDS.Rd |only man/PCFM2S.Rd |only man/PCFMS.Rd |only man/PLCS.Rd |only man/PRHS.Rd |only man/RHS.Rd | 2 - man/STARS.Rd | 2 - man/modelS3.Rd | 8 ++-- vignettes/demofit.Rmd | 8 ++-- 52 files changed, 298 insertions(+), 158 deletions(-)
Title: Calculates Composite Index
Description: It uses the first-order sensitivity index to measure whether the weights assigned by the creator of the composite indicator match the actual importance of the variables. Moreover, the variance inflation factor is used to reduce the set of correlated variables. In the case of a discrepancy between the importance and the assigned weight, the script determines weights that allow adjustment of the weights to the intended impact of variables. If the optimised weights are unable to reflect the desired importance, the highly correlated variables are reduced, taking into account variance inflation factor. The final outcome of the script is the calculated value of the composite indicator based on optimal weights and a reduced set of variables, and the linear ordering of the analysed objects.
Author: Olgun Aydin [cre] ,
Marta Kuc-Czarnecka [aut] ,
Michal Pietrzak [aut]
Maintainer: Olgun Aydin <olgun.aydin@pg.edu.pl>
Diff between compindexR versions 0.1.3 dated 2023-11-25 and 0.1.4 dated 2026-06-11
DESCRIPTION | 17 +++++++++-------- MD5 | 8 ++++---- R/scaling.R | 9 +-------- R/si_linear_exc_vif.R | 4 ++-- README.md | 4 ++-- 5 files changed, 18 insertions(+), 24 deletions(-)
Title: Extract and Tidy Canadian 'Hydrometric' Data
Description: Provides functions to access historical and real-time national 'hydrometric'
data from Water Survey of Canada data sources and then applies tidy data principles.
Author: Sam Albers [aut, cre, cph] ,
Province of British Columbia [cph] ,
Tula Foundation [cph] ,
David Hutchinson [ctb],
Dewey Dunnington [ctb],
Ryan Whaley [ctb],
Government of Canada [dtc],
Luke Winslow [rev] ,
Laura DeCicco [rev]
Maintainer: Sam Albers <sam.albers@gmail.com>
Diff between tidyhydat versions 1.0.0 dated 2026-02-03 and 1.0.1 dated 2026-06-11
DESCRIPTION | 8 MD5 | 119 ++++---- NEWS.md | 5 R/available.R | 146 ++++++---- R/realtime-webservice.R | 16 - R/realtime.R | 2 R/utils-realtime.R | 6 R/utils.R | 102 +++++- build/partial.rdb |binary build/vignette.rds |binary data/allstations.rda |binary data/hy_data_symbols.rda |binary data/hy_data_types.rda |binary inst/doc/tidyhydat_an_introduction.Rmd | 60 ++-- inst/doc/tidyhydat_an_introduction.html | 64 ++-- inst/doc/tidyhydat_example_analysis.Rmd | 32 -- inst/doc/tidyhydat_example_analysis.html | 60 +--- inst/doc/tidyhydat_hydat_db.Rmd | 16 - inst/doc/tidyhydat_hydat_db.html | 18 - man/available_flows.Rd | 4 man/available_levels.Rd | 4 man/hy_agency_list.Rd | 44 +-- man/hy_annual_instant_peaks.Rd | 44 +-- man/hy_annual_stats.Rd | 44 +-- man/hy_daily.Rd | 44 +-- man/hy_daily_flows.Rd | 44 +-- man/hy_daily_levels.Rd | 44 +-- man/hy_data_symbols.Rd | 46 +-- man/hy_data_types.Rd | 46 +-- man/hy_datum_list.Rd | 44 +-- man/hy_monthly_flows.Rd | 44 +-- man/hy_monthly_levels.Rd | 44 +-- man/hy_reg_office_list.Rd | 44 +-- man/hy_sed_daily_loads.Rd | 44 +-- man/hy_sed_daily_suscon.Rd | 44 +-- man/hy_sed_monthly_loads.Rd | 44 +-- man/hy_sed_monthly_suscon.Rd | 44 +-- man/hy_sed_samples.Rd | 44 +-- man/hy_sed_samples_psd.Rd | 44 +-- man/hy_src.Rd | 2 man/hy_stations.Rd | 46 +-- man/hy_stn_data_coll.Rd | 44 +-- man/hy_stn_data_range.Rd | 44 +-- man/hy_stn_op_schedule.Rd | 44 +-- man/hy_stn_regulation.Rd | 44 +-- man/hy_version.Rd | 44 +-- man/realtime_dd.Rd | 6 man/realtime_stations.Rd | 6 man/realtime_ws.Rd | 6 man/tidyhydat-package.Rd | 5 tests/testthat/fixtures/wateroffice.ec.gc.ca/services/real_time_data/csv/inline-7f58b3.R |only tests/testthat/test-available-classes.R | 80 +++++ tests/testthat/test-realtime-webservice.R | 16 + vignettes/tidyhydat_an_introduction.Rmd | 60 ++-- vignettes/tidyhydat_example_analysis.Rmd | 32 -- vignettes/tidyhydat_hydat_db.Rmd | 16 - vignettes/vignette-fig-old_rec-1.png |binary vignettes/vignette-fig-old_rec_yr-1.png |binary vignettes/vignette-fig-pcrtile_plt-1.png |binary vignettes/vignette-fig-tile_plt-1.png |binary vignettes/vignette-fig-unnamed-chunk-15-1.png |binary 61 files changed, 1067 insertions(+), 886 deletions(-)
Title: Flexible Non-Linear Least Square Model Fitting
Description: Provides tools for flexible non-linear least squares model fitting using general-purpose optimization techniques. The package supports a variety of optimization algorithms, including those provided by the 'optimx' package, making it suitable for handling complex non-linear models. Features include parallel processing support via the 'future' and 'foreach' packages, comprehensive model diagnostics, and visualization capabilities. Implements methods described in Nash and Varadhan (2011, <doi:10.18637/jss.v043.i09>).
Author: Johan Aparicio [cre, aut],
Jeffrey Endelman [aut],
University of Wisconsin Madison [cph]
Maintainer: Johan Aparicio <aparicioarce@wisc.edu>
Diff between flexFitR versions 1.2.2 dated 2026-01-27 and 1.2.3 dated 2026-06-11
DESCRIPTION | 6 - MD5 | 36 +++--- NEWS.md | 13 ++ R/00_dt_potato.R | 23 +++- R/02_modeler.R | 226 ----------------------------------------- R/03_metrics.R | 3 R/04_predict.R | 9 - R/08_comparison.R | 4 R/11_influence.R | 8 - R/12_update.R | 4 R/99_growth_curves.R | 9 - data/dt_potato_22.rda |only inst/doc/canopy-model.html | 7 - inst/doc/how_to_start.html | 13 +- inst/doc/maturity-model.html | 7 - inst/doc/plotting.html | 5 inst/doc/predicted_values.html | 9 - man/dt_potato.Rd | 4 man/dt_potato_22.Rd |only man/fn_lll.Rd | 2 20 files changed, 101 insertions(+), 287 deletions(-)
Title: Easily Build Command Line Applications
Description: Run simple 'R' scripts as command line applications, with
automatic robust and convenient support for command line arguments.
This package provides 'Rapp', an alternative 'R' front-end similar to
'Rscript', that enables this.
Author: Tomasz Kalinowski [aut, cre]
Maintainer: Tomasz Kalinowski <tomasz@posit.co>
Diff between Rapp versions 0.3.0 dated 2025-12-14 and 0.4.0 dated 2026-06-11
DESCRIPTION | 10 MD5 | 61 ++- NAMESPACE | 4 NEWS.md | 74 +++- R/app.R | 25 + R/args.R | 186 +++++++++-- R/help.R | 247 +++++++++++++-- R/install.R | 269 ++++++++++++++-- R/utils.R | 53 +++ R/yaml.R | 64 ---- README.md | 125 +++++-- inst/add-path-entry.ps1 | 36 ++ inst/examples/flip-coin.R | 2 inst/examples/todo.R | 15 inst/notes |only man/install_pkg_cli_apps.Rd | 29 + tests/testthat/_snaps/basics.md | 6 tests/testthat/_snaps/help-snapshots.md | 99 ++++-- tests/testthat/_snaps/multi-options.md | 22 - tests/testthat/_snaps/regressions.md |only tests/testthat/_snaps/subcommands.md |only tests/testthat/_snaps/todo.md | 10 tests/testthat/apps/kitchen-sink.R | 1 tests/testthat/apps/ls.R | 4 tests/testthat/apps/nested-commands.R | 1 tests/testthat/apps/simple-commands.R | 3 tests/testthat/test-help-annotations.R | 176 ++++++++++- tests/testthat/test-help-snapshots.R | 36 -- tests/testthat/test-install.R | 500 +++++++++++++++++++++++++++++++ tests/testthat/test-multi-options.R | 7 tests/testthat/test-regressions.R | 509 ++++++++++++++++++++++++++++++++ tests/testthat/test-subcommands.R | 267 ++++++++++++++++ tests/testthat/test-todo.R | 25 + 33 files changed, 2508 insertions(+), 358 deletions(-)
Title: Visually Exploring Random Forests
Description: Graphic elements for exploring Random Forests using the
'randomForest' or 'randomForestSRC' package for survival, regression
and classification forests and 'ggplot2' package plotting. Implements
visualisations of the methods described in Breiman (2001)
<doi:10.1023/A:1010933404324> and Ishwaran, Kogalur, Blackstone, and
Lauer (2008) <doi:10.1214/08-AOAS169>.
Author: John Ehrlinger [aut, cre]
Maintainer: John Ehrlinger <john.ehrlinger@gmail.com>
Diff between ggRandomForests versions 2.7.3 dated 2026-05-12 and 3.1.0 dated 2026-06-11
ggRandomForests-2.7.3/ggRandomForests/man/gg_partialpro.Rd |only ggRandomForests-2.7.3/ggRandomForests/man/plot.gg_partialpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/DESCRIPTION | 18 ggRandomForests-3.1.0/ggRandomForests/MD5 | 247 - ggRandomForests-3.1.0/ggRandomForests/NAMESPACE | 62 ggRandomForests-3.1.0/ggRandomForests/NEWS.md | 270 + ggRandomForests-3.1.0/ggRandomForests/R/autoplot_methods.R | 40 ggRandomForests-3.1.0/ggRandomForests/R/calc_roc.R | 169 ggRandomForests-3.1.0/ggRandomForests/R/gg_beta_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/gg_brier.R | 54 ggRandomForests-3.1.0/ggRandomForests/R/gg_error.R | 10 ggRandomForests-3.1.0/ggRandomForests/R/gg_isopro.R |only ggRandomForests-3.1.0/ggRandomForests/R/gg_ivarpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/gg_partial.R | 31 ggRandomForests-3.1.0/ggRandomForests/R/gg_partial_rfsrc.R | 50 ggRandomForests-3.1.0/ggRandomForests/R/gg_partial_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/gg_partialpro.R | 175 ggRandomForests-3.1.0/ggRandomForests/R/gg_rfsrc.R | 39 ggRandomForests-3.1.0/ggRandomForests/R/gg_roc.R | 110 ggRandomForests-3.1.0/ggRandomForests/R/gg_survival.R | 33 ggRandomForests-3.1.0/ggRandomForests/R/gg_udependent.R |only ggRandomForests-3.1.0/ggRandomForests/R/gg_variable.R | 77 ggRandomForests-3.1.0/ggRandomForests/R/gg_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/gg_vimp.R | 50 ggRandomForests-3.1.0/ggRandomForests/R/help.R | 4 ggRandomForests-3.1.0/ggRandomForests/R/kaplan.R | 2 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_beta_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_brier.R | 20 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_error.R | 33 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_isopro.R |only ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_ivarpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_partial.R | 170 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_partial_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_rfsrc.R | 30 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_roc.R | 114 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_survival.R | 15 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_udependent.R |only ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_variable.R | 88 ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/R/plot.gg_vimp.R | 17 ggRandomForests-3.1.0/ggRandomForests/R/print_helpers.R | 2 ggRandomForests-3.1.0/ggRandomForests/R/print_methods.R | 188 ggRandomForests-3.1.0/ggRandomForests/R/ribbon_style.R | 8 ggRandomForests-3.1.0/ggRandomForests/R/summary_methods.R | 154 ggRandomForests-3.1.0/ggRandomForests/R/surv_partial.rfsrc.R | 34 ggRandomForests-3.1.0/ggRandomForests/R/varpro_feature_names.R | 10 ggRandomForests-3.1.0/ggRandomForests/README.md | 36 ggRandomForests-3.1.0/ggRandomForests/build/partial.rdb |only ggRandomForests-3.1.0/ggRandomForests/build/vignette.rds |binary ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests-regression.R | 42 ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests-regression.html | 2006 --------- ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests-regression.qmd | 128 ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests-survival.R | 36 ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests-survival.html | 2171 ---------- ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests-survival.qmd | 194 ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests.html | 71 ggRandomForests-3.1.0/ggRandomForests/inst/doc/ggRandomForests.qmd | 77 ggRandomForests-3.1.0/ggRandomForests/inst/doc/varpro.R |only ggRandomForests-3.1.0/ggRandomForests/inst/doc/varpro.html |only ggRandomForests-3.1.0/ggRandomForests/inst/doc/varpro.qmd |only ggRandomForests-3.1.0/ggRandomForests/man/autoplot.gg.Rd | 44 ggRandomForests-3.1.0/ggRandomForests/man/bootstrap_survival.Rd | 4 ggRandomForests-3.1.0/ggRandomForests/man/calc_auc.Rd | 6 ggRandomForests-3.1.0/ggRandomForests/man/calc_roc.rfsrc.Rd | 16 ggRandomForests-3.1.0/ggRandomForests/man/dot-build_varpro_imp_dfs.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/dot-build_varpro_imp_tree.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/dot-varpro_imp_stats.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/ggRandomForests-package.Rd | 4 ggRandomForests-3.1.0/ggRandomForests/man/gg_beta_varpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/gg_brier.Rd | 93 ggRandomForests-3.1.0/ggRandomForests/man/gg_error.Rd | 24 ggRandomForests-3.1.0/ggRandomForests/man/gg_isopro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/gg_ivarpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/gg_partial.Rd | 44 ggRandomForests-3.1.0/ggRandomForests/man/gg_partial_rfsrc.Rd | 69 ggRandomForests-3.1.0/ggRandomForests/man/gg_partial_varpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/gg_rfsrc.rfsrc.Rd | 91 ggRandomForests-3.1.0/ggRandomForests/man/gg_roc.rfsrc.Rd | 68 ggRandomForests-3.1.0/ggRandomForests/man/gg_survival.Rd | 38 ggRandomForests-3.1.0/ggRandomForests/man/gg_udependent.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/gg_variable.Rd | 42 ggRandomForests-3.1.0/ggRandomForests/man/gg_varpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/gg_vimp.Rd | 41 ggRandomForests-3.1.0/ggRandomForests/man/ggrandomforests.news.Rd | 2 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_beta_varpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_brier.Rd | 23 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_error.Rd | 18 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_isopro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_ivarpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_partial.Rd | 24 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_partial_rfsrc.Rd | 32 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_partial_varpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_rfsrc.Rd | 69 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_roc.Rd | 42 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_survival.Rd | 24 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_udependent.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_variable.Rd | 27 ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_varpro.Rd |only ggRandomForests-3.1.0/ggRandomForests/man/plot.gg_vimp.Rd | 19 ggRandomForests-3.1.0/ggRandomForests/man/print.gg.Rd | 33 ggRandomForests-3.1.0/ggRandomForests/man/quantile_pts.Rd | 4 ggRandomForests-3.1.0/ggRandomForests/man/summary.gg.Rd | 34 ggRandomForests-3.1.0/ggRandomForests/man/surv_partial.rfsrc.Rd | 50 ggRandomForests-3.1.0/ggRandomForests/man/varpro_feature_names.Rd | 6 ggRandomForests-3.1.0/ggRandomForests/tests/testthat/Rplots.pdf |binary ggRandomForests-3.1.0/ggRandomForests/tests/testthat/_snaps |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/helper-varpro-fixtures.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/setup.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_beta_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_isopro.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_ivarpro.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_partial_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_partialpro.R | 55 ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_roc.R | 154 ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_udependent.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_variable.R | 265 + ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_gg_vimp.R | 26 ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_namespace_hygiene.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_plot_conventions.R |only ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_plot_layer_data.R | 107 ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_snapshots.R | 299 + ggRandomForests-3.1.0/ggRandomForests/tests/testthat/test_surv_partial.R | 10 ggRandomForests-3.1.0/ggRandomForests/vignettes/ggRandomForests-regression.qmd | 128 ggRandomForests-3.1.0/ggRandomForests/vignettes/ggRandomForests-survival.qmd | 194 ggRandomForests-3.1.0/ggRandomForests/vignettes/ggRandomForests.bib | 19 ggRandomForests-3.1.0/ggRandomForests/vignettes/ggRandomForests.qmd | 77 ggRandomForests-3.1.0/ggRandomForests/vignettes/precompute_varpro.R |only ggRandomForests-3.1.0/ggRandomForests/vignettes/varpro.qmd |only ggRandomForests-3.1.0/ggRandomForests/vignettes/varpro_precomputed.rds |only 130 files changed, 3917 insertions(+), 5493 deletions(-)
More information about ggRandomForests at CRAN
Permanent link
Title: Download Radar Data for Biological Research
Description: Load polar volume and vertical profile data for
aeroecological research directly into R. With 'getRad' you can access
data from several sources in Europe and the US and standardize it to
facilitate further exploration in tools such as 'bioRad'.
Author: Bart Kranstauber [aut, cre] ,
Pieter Huybrechts [aut] ),
Peter Desmet [aut] ),
Cecilia Nilsson [ctb] ,
Alexander Tedeschi [ctb] ,
Hidde Leijnse [ctb] ,
Bart Hoekstra [ctb] ,
University of Amsterdam [cph] ,
Biodiversa+ [fnd]
Maintainer: Bart Kranstauber <b.kranstauber@uva.nl>
Diff between getRad versions 0.2.4 dated 2025-12-10 and 0.3.0 dated 2026-06-11
getRad-0.2.4/getRad/man/get_vpts_aloft.Rd |only getRad-0.2.4/getRad/man/get_vpts_rmi.Rd |only getRad-0.2.4/getRad/man/req_cache_getrad.Rd |only getRad-0.3.0/getRad/DESCRIPTION | 10 getRad-0.3.0/getRad/MD5 | 91 +++--- getRad-0.3.0/getRad/NAMESPACE | 1 getRad-0.3.0/getRad/NEWS.md | 12 getRad-0.3.0/getRad/R/getRad-package.R | 1 getRad-0.3.0/getRad/R/get_pvol.R | 14 - getRad-0.3.0/getRad/R/get_pvol_at.R |only getRad-0.3.0/getRad/R/get_pvol_cz.R | 57 +++- getRad-0.3.0/getRad/R/get_pvol_ee.R | 5 getRad-0.3.0/getRad/R/get_pvol_nl.R | 13 getRad-0.3.0/getRad/R/get_pvol_ro.R | 16 + getRad-0.3.0/getRad/R/get_vpts.R | 134 +++++++--- getRad-0.3.0/getRad/R/get_vpts_aloft.R | 15 - getRad-0.3.0/getRad/R/get_vpts_birdcast.R |only getRad-0.3.0/getRad/R/get_vpts_coverage.R | 7 getRad-0.3.0/getRad/R/get_vpts_coverage_aloft.R | 1 getRad-0.3.0/getRad/R/get_vpts_coverage_birdcast.R |only getRad-0.3.0/getRad/R/get_vpts_local.R |only getRad-0.3.0/getRad/R/get_vpts_local_aloft.R |only getRad-0.3.0/getRad/R/get_vpts_local_dark_ecology.R |only getRad-0.3.0/getRad/R/get_vpts_rmi.R | 2 getRad-0.3.0/getRad/R/get_weather_radars.R | 4 getRad-0.3.0/getRad/R/utils.R | 57 +++- getRad-0.3.0/getRad/R/utils_pvol.R | 11 getRad-0.3.0/getRad/R/utils_vpts_aloft.R | 29 -- getRad-0.3.0/getRad/R/zzz.R | 37 ++ getRad-0.3.0/getRad/README.md | 25 - getRad-0.3.0/getRad/inst/doc/supported_sources.R | 1 getRad-0.3.0/getRad/inst/doc/supported_sources.Rmd | 1 getRad-0.3.0/getRad/inst/doc/supported_sources.html | 4 getRad-0.3.0/getRad/man/getRad-package.Rd | 17 - getRad-0.3.0/getRad/man/get_pvol.Rd | 2 getRad-0.3.0/getRad/man/get_vpts.Rd | 47 ++- getRad-0.3.0/getRad/man/get_vpts_coverage.Rd | 9 getRad-0.3.0/getRad/man/get_weather_radars.Rd | 2 getRad-0.3.0/getRad/tests/testthat/test-get_pvol.R | 30 ++ getRad-0.3.0/getRad/tests/testthat/test-get_pvol_at.R |only getRad-0.3.0/getRad/tests/testthat/test-get_pvol_cz.R | 21 + getRad-0.3.0/getRad/tests/testthat/test-get_pvol_dk.R | 1 getRad-0.3.0/getRad/tests/testthat/test-get_pvol_ee.R | 26 + getRad-0.3.0/getRad/tests/testthat/test-get_pvol_nl.R | 53 ++- getRad-0.3.0/getRad/tests/testthat/test-get_pvol_ro.R | 7 getRad-0.3.0/getRad/tests/testthat/test-get_pvol_se.R | 2 getRad-0.3.0/getRad/tests/testthat/test-get_vpts_birdcast.R |only getRad-0.3.0/getRad/tests/testthat/test-get_vpts_coverage.R | 22 + getRad-0.3.0/getRad/tests/testthat/test-get_vpts_coverage_birdcast.R |only getRad-0.3.0/getRad/tests/testthat/test-get_vpts_coverage_rmi.R | 2 getRad-0.3.0/getRad/tests/testthat/test-get_vpts_local.R |only getRad-0.3.0/getRad/tests/testthat/test-get_vpts_local_aloft.R |only getRad-0.3.0/getRad/tests/testthat/test-get_vpts_local_dark_ecology.R |only getRad-0.3.0/getRad/vignettes/supported_sources.Rmd | 1 54 files changed, 589 insertions(+), 201 deletions(-)
Title: Staggered DiD Tools: Event Studies and ATT Aggregation
Description: Provides tools for difference-in-differences (DiD) estimation and
visualization with staggered adoption. Includes run_es() for event-study
curves (dynamic effects by relative time) and calc_att() for aggregated
ATT estimation (overall, by cohort, by calendar time). Supports multiple
modern estimators: Callaway-Sant'Anna (2021), Sun-Abraham (2021),
Borusyak-Jaravel-Spiess (2024), Wooldridge TWM, and Deb et al. FLEX.
Author: Yosuke Abe [aut, cre]
Maintainer: Yosuke Abe <yosuke.abe0507@gmail.com>
Diff between fixes versions 0.8.1 dated 2026-05-10 and 0.11.2 dated 2026-06-11
DESCRIPTION | 29 MD5 | 85 + NAMESPACE | 34 NEWS.md | 316 ++++++ R/RcppExports.R | 132 ++ R/autoplot-es_result.R | 22 R/bootstrap_cs.R | 226 ++-- R/calc_att.R |only R/contamination_weights_sa.R |only R/estimators_bjs.R | 32 R/estimators_cs.R | 144 +-- R/estimators_flex.R |only R/estimators_sa.R | 156 --- R/estimators_twm.R |only R/honest_did.R |only R/plot_att_gt.R | 242 +++-- R/plot_es.R | 168 ++- R/plot_es_interactive.R | 176 ++- R/plot_honest.R |only R/run_did.R |only R/run_es.R | 1277 +++++++++++++++++----------- R/tidy-did_result.R |only R/utils-internal.R |only README.md | 482 ++++++---- inst/doc/fixes-intro.html | 8 inst/profile |only man/autoplot.es_result.Rd | 14 man/calc_att.Rd |only man/compute_contamination_weights.Rd |only man/figures/README-twm-plot-1.png |only man/glance.did_result.Rd |only man/honest_sensitivity.Rd |only man/plot_att_gt.Rd | 29 man/plot_contamination_weights.Rd |only man/plot_es.Rd | 4 man/plot_es_interactive.Rd | 16 man/plot_honest.Rd |only man/run_did.Rd |only man/run_es.Rd | 47 - man/tidy.did_result.Rd |only src/Makevars |only src/Makevars.win |only src/RcppExports.cpp | 66 + src/bootstrap_cs.cpp |only src/compute_att_gt.cpp | 17 src/cov_demeaning.cpp |only src/indicator_matrix.cpp |only src/iw_aggregation.cpp |only tests/testthat/test-att.R |only tests/testthat/test-contamination-weights.R |only tests/testthat/test-cs.R | 4 tests/testthat/test-did.R |only tests/testthat/test-flex.R |only tests/testthat/test-honest.R |only tests/testthat/test-rcpp-bootstrap.R |only tests/testthat/test-rcpp-covdemeaning.R |only tests/testthat/test-rcpp-indicator.R |only tests/testthat/test-rcpp-iw.R |only tests/testthat/test-robustness.R |only tests/testthat/test-sa.R | 44 tests/testthat/test-twm.R |only tests/testthat/test-utils-internal.R |only 62 files changed, 2448 insertions(+), 1322 deletions(-)
Title: Streamlined Analysis of Wild Pedigree Data
Description: Analyzing pedigree data of wild
populations. While primarily designed to process outputs from the
'COLONY' (Jones & Wang (2010) <doi:10.1111/j.1755-0998.2009.02787.x>)
pedigree reconstruction software, it can also accommodate
data from other sources. By linking reconstructed pedigrees with
genetic sample metadata, 'wpeR' produces spatial and temporal
visualizations as well as tabular summaries that support
interpretation of family structures and dynamics. The main goal of the
package is to provide a solution for the analysis of
complex wild pedigree data and to help the user to gain insights
into genetic relationships within wild animal populations.
Author: Tomaz Skrbinsek [aut],
Gregor Simcic [aut, cre]
Maintainer: Gregor Simcic <grega0simcic@gmail.com>
Diff between wpeR versions 0.1.0 dated 2025-07-14 and 0.2.0 dated 2026-06-11
DESCRIPTION | 8 MD5 | 64 +- NAMESPACE | 1 NEWS.md | 17 R/anim_timespan.R | 36 - R/check_sampledata.R | 41 + R/data.R | 7 R/org_fams.R | 17 R/ped_satplot.R | 49 +- R/ped_spatial.R | 16 R/plot_table.R | 158 ++++--- R/pps_subfunctions.R | 265 +++++------ README.md | 15 build/vignette.rds |binary data/wolf_samples.rda |binary inst/doc/wpeR.R | 123 +++-- inst/doc/wpeR.Rmd | 133 ++++- inst/doc/wpeR.html | 738 +++++++++++++++++---------------- man/anim_timespan.Rd | 21 man/check_sampledata.Rd | 24 - man/org_fams.Rd | 13 man/ped_satplot.Rd | 30 - man/ped_spatial.Rd | 10 man/plot_table.Rd | 61 +- man/wolf_samples.Rd | 5 tests/testthat/test-anim_timespan.R | 10 tests/testthat/test-check_sampledata.R | 47 ++ tests/testthat/test-org_fams.R | 3 tests/testthat/test-ped_satplot.R | 10 tests/testthat/test-ped_spatial.R | 10 tests/testthat/test-plot_table.R | 29 - tests/testthat/test-pps_subfunctions.R | 10 vignettes/wpeR.Rmd | 133 ++++- 33 files changed, 1275 insertions(+), 829 deletions(-)
Title: Interactive Tabular Matrix Problems via Pseudoinverse Estimation
Description: Provides an interactive wrapper for the 'tmpinv()' function from
the 'rtmpinv' package with options extending its functionality to pre-
and post-estimation processing and streamlined incorporation of prior cell
information. The Tabular Matrix Problems via Pseudoinverse Estimation
(TMPinv) is a two-stage estimation method that reformulates structured
table-based systems - such as allocation problems, transaction matrices,
and input-output tables - as structured least-squares problems. Based
on the Convex Least Squares Programming (CLSP) framework, TMPinv solves
systems with row and column constraints, block structure, and optionally
reduced dimensionality by (1) constructing a canonical constraint form
and applying a pseudoinverse-based projection, followed by (2) a
convex-programming refinement stage to improve fit, coherence, and
regularization (e.g., via Lasso, Ridge, or Elastic Net).
Author: Ilya Bolotov [aut, cre]
Maintainer: Ilya Bolotov <ilya.bolotov@vse.cz>
Diff between rtmpinvi versions 1.1.0 dated 2026-06-07 and 2.0.0 dated 2026-06-11
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- NEWS.md | 5 +++++ 3 files changed, 11 insertions(+), 6 deletions(-)
Title: Linear Programming via Regularized Least Squares
Description: The Linear Programming via Regularized Least Squares (LPPinv) is a
two-stage estimation method that reformulates linear programs as
structured least-squares problems. Based on the Convex Least
Squares Programming (CLSP) framework, LPPinv solves linear
inequality, equality, and bound constraints by (1) constructing a
canonical constraint system and computing a pseudoinverse
projection, followed by (2) a convex-programming correction stage
to refine the solution under additional regularization (e.g.,
Lasso, Ridge, or Elastic Net). LPPinv is intended for
underdetermined and ill-posed linear problems, for which standard
solvers fail.
Author: Ilya Bolotov [aut, cre]
Maintainer: Ilya Bolotov <ilya.bolotov@vse.cz>
Diff between rlppinv versions 1.1.0 dated 2026-06-07 and 2.0.0 dated 2026-06-11
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- NEWS.md | 8 +++++++- 3 files changed, 13 insertions(+), 7 deletions(-)
Title: Assessing Package Risk Metrics
Description: A reliable and validated tool that captures detailed risk metrics
such as R 'CMD' check, test coverage, traceability matrix, documentation, dependencies,
reverse dependencies, suggested dependency analysis, repository data,
and enhanced reporting for R packages that are local or stored
on remote repositories such as GitHub, CRAN, and Bioconductor.
Author: Edward Gillian [cre, aut] ,
Hugo Bottois [aut] ,
Paulin Charliquart [aut],
Andre Couturier [aut],
Sanofi [cph, fnd]
Maintainer: Edward Gillian <edward.gillian-ext@sanofi.com>
Diff between risk.assessr versions 3.1.1 dated 2026-04-08 and 4.1.0 dated 2026-06-11
risk.assessr-3.1.1/risk.assessr/R/get_tests_long_sum_stf.R |only risk.assessr-3.1.1/risk.assessr/R/get_tests_skip_stf.R |only risk.assessr-3.1.1/risk.assessr/R/map_tests_stf.R |only risk.assessr-3.1.1/risk.assessr/R/run_covr_modes.R |only risk.assessr-3.1.1/risk.assessr/R/run_covr_skip_nstf.R |only risk.assessr-3.1.1/risk.assessr/R/run_covr_skip_stf.R |only risk.assessr-3.1.1/risk.assessr/R/unittest_methods.R |only risk.assessr-3.1.1/risk.assessr/man/check_covr_skip_nstf.Rd |only risk.assessr-3.1.1/risk.assessr/man/check_pkg_tests_and_snaps.Rd |only risk.assessr-3.1.1/risk.assessr/man/cleanup_and_return_null.Rd |only risk.assessr-3.1.1/risk.assessr/man/coverage_skip.Rd |only risk.assessr-3.1.1/risk.assessr/man/create_covr_list_no_skip.Rd |only risk.assessr-3.1.1/risk.assessr/man/create_results_summary.Rd |only risk.assessr-3.1.1/risk.assessr/man/filter_symbol_functions.Rd |only risk.assessr-3.1.1/risk.assessr/man/get_expect.Rd |only risk.assessr-3.1.1/risk.assessr/man/get_function_no_tests.Rd |only risk.assessr-3.1.1/risk.assessr/man/get_source_test_mapping_nstf.Rd |only risk.assessr-3.1.1/risk.assessr/man/get_test_path.Rd |only risk.assessr-3.1.1/risk.assessr/man/get_tests_long_sum_stf.Rd |only risk.assessr-3.1.1/risk.assessr/man/get_tests_skip_stf.Rd |only risk.assessr-3.1.1/risk.assessr/man/get_toplevel_assignments.Rd |only risk.assessr-3.1.1/risk.assessr/man/load_package_datasets.Rd |only risk.assessr-3.1.1/risk.assessr/man/map_functions_to_docs.Rd |only risk.assessr-3.1.1/risk.assessr/man/map_functions_to_scripts.Rd |only risk.assessr-3.1.1/risk.assessr/man/map_test.Rd |only risk.assessr-3.1.1/risk.assessr/man/map_testthat.Rd |only risk.assessr-3.1.1/risk.assessr/man/nest_expect.Rd |only risk.assessr-3.1.1/risk.assessr/man/nest_test.Rd |only risk.assessr-3.1.1/risk.assessr/man/run_coverage.Rd |only risk.assessr-3.1.1/risk.assessr/man/run_covr.Rd |only risk.assessr-3.1.1/risk.assessr/man/run_covr_modes.Rd |only risk.assessr-3.1.1/risk.assessr/man/run_covr_safe_stf.Rd |only risk.assessr-3.1.1/risk.assessr/man/run_covr_skip_nstf.Rd |only risk.assessr-3.1.1/risk.assessr/man/run_covr_skip_stf.Rd |only risk.assessr-3.1.1/risk.assessr/man/unrowname.Rd |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-get_tests_long_sum_stf.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-get_tests_skip_stf.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-get_toplevel_assignments.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-map_functions_to_scripts.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-map_tests_stf.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-run_coverage.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-run_covr.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-run_covr_modes.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-run_covr_skip_nstf.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-run_covr_skip_stf.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test-unittest_methods.R |only risk.assessr-3.1.1/risk.assessr/tests/testthat/test_get_package_tarfile.R |only risk.assessr-4.1.0/risk.assessr/DESCRIPTION | 26 risk.assessr-4.1.0/risk.assessr/MD5 | 187 - risk.assessr-4.1.0/risk.assessr/NAMESPACE | 14 risk.assessr-4.1.0/risk.assessr/NEWS.md | 34 risk.assessr-4.1.0/risk.assessr/R/assess_pkg.R | 18 risk.assessr-4.1.0/risk.assessr/R/check_suggested_exp_funcs.R | 183 - risk.assessr-4.1.0/risk.assessr/R/contains_vignette_folder.R | 10 risk.assessr-4.1.0/risk.assessr/R/core_metrics.R | 106 risk.assessr-4.1.0/risk.assessr/R/create_traceability_matrix.R | 535 +-- risk.assessr-4.1.0/risk.assessr/R/dependencies.R | 3 risk.assessr-4.1.0/risk.assessr/R/documentation_metrics.R | 408 ++ risk.assessr-4.1.0/risk.assessr/R/generate_html_report.R | 70 risk.assessr-4.1.0/risk.assessr/R/generate_traceability_matrix.R | 9 risk.assessr-4.1.0/risk.assessr/R/get_github_data.R | 63 risk.assessr-4.1.0/risk.assessr/R/get_risk_analysis.R | 1 risk.assessr-4.1.0/risk.assessr/R/globals.R | 4 risk.assessr-4.1.0/risk.assessr/R/install_package_local.R | 22 risk.assessr-4.1.0/risk.assessr/R/modify_description_file.R | 162 - risk.assessr-4.1.0/risk.assessr/R/set_up_pkg.R | 54 risk.assessr-4.1.0/risk.assessr/R/unpack_tarball.R | 109 risk.assessr-4.1.0/risk.assessr/R/utils.R | 98 risk.assessr-4.1.0/risk.assessr/README.md | 28 risk.assessr-4.1.0/risk.assessr/inst/doc/dependency_tree.html | 163 - risk.assessr-4.1.0/risk.assessr/inst/doc/get-package-host.R | 4 risk.assessr-4.1.0/risk.assessr/inst/doc/get-package-host.Rmd | 2 risk.assessr-4.1.0/risk.assessr/inst/doc/get-package-host.html | 2 risk.assessr-4.1.0/risk.assessr/inst/doc/risk.assessr_metric.Rmd | 4 risk.assessr-4.1.0/risk.assessr/inst/doc/risk.assessr_metric.html | 4 risk.assessr-4.1.0/risk.assessr/inst/report_templates/risk_report_template.Rmd | 85 risk.assessr-4.1.0/risk.assessr/man/assess_exported_functions_docs.Rd | 26 risk.assessr-4.1.0/risk.assessr/man/assess_exports.Rd | 8 risk.assessr-4.1.0/risk.assessr/man/build_r_script_lookup.Rd |only risk.assessr-4.1.0/risk.assessr/man/camel_to_kebab.Rd |only risk.assessr-4.1.0/risk.assessr/man/check_forbidden_notes.Rd | 17 risk.assessr-4.1.0/risk.assessr/man/check_suggested_exp_funcs.Rd | 1 risk.assessr-4.1.0/risk.assessr/man/contains_vignette_folder.Rd | 10 risk.assessr-4.1.0/risk.assessr/man/cran_packages.Rd | 3 risk.assessr-4.1.0/risk.assessr/man/create_traceability_matrix.Rd | 30 risk.assessr-4.1.0/risk.assessr/man/extract_coverage_df.Rd |only risk.assessr-4.1.0/risk.assessr/man/extract_short_path.Rd |only risk.assessr-4.1.0/risk.assessr/man/figures |only risk.assessr-4.1.0/risk.assessr/man/find_news_files.Rd |only risk.assessr-4.1.0/risk.assessr/man/generate_coverage_section.Rd | 2 risk.assessr-4.1.0/risk.assessr/man/get_exported_function_names.Rd |only risk.assessr-4.1.0/risk.assessr/man/get_exports_from_source.Rd |only risk.assessr-4.1.0/risk.assessr/man/modify_description_file.Rd | 3 risk.assessr-4.1.0/risk.assessr/man/normalize_code_script_key.Rd |only risk.assessr-4.1.0/risk.assessr/man/risk.assessr-package.Rd | 6 risk.assessr-4.1.0/risk.assessr/man/set_up_pkg.Rd | 8 risk.assessr-4.1.0/risk.assessr/tests/testthat/helper-skip_conditions.R |only risk.assessr-4.1.0/risk.assessr/tests/testthat/setup.R | 2 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-assess_pkg.R | 490 +-- risk.assessr-4.1.0/risk.assessr/tests/testthat/test-badges.R | 256 + risk.assessr-4.1.0/risk.assessr/tests/testthat/test-bioconductor_reverse_deps.R | 167 + risk.assessr-4.1.0/risk.assessr/tests/testthat/test-check_suggested_exp_funcs.R | 481 +++ risk.assessr-4.1.0/risk.assessr/tests/testthat/test-cran_packages.R | 24 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-create_traceability_matrix.R | 1453 +++++++--- risk.assessr-4.1.0/risk.assessr/tests/testthat/test-documentation_metrics.R | 1304 ++++++++ risk.assessr-4.1.0/risk.assessr/tests/testthat/test-generate_html_report.R | 331 ++ risk.assessr-4.1.0/risk.assessr/tests/testthat/test-generate_traceability_matrix.R | 104 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-get_exports.R | 50 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-get_github_data.R | 156 + risk.assessr-4.1.0/risk.assessr/tests/testthat/test-get_package_host_info.R | 84 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-get_package_tarfile.R |only risk.assessr-4.1.0/risk.assessr/tests/testthat/test-get_pkg_name.R | 35 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-install_package_local.R | 46 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-modify_description_file.R | 578 ++- risk.assessr-4.1.0/risk.assessr/tests/testthat/test-parse_dcf_dependencies.R | 12 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-reverse_dependencies.R | 3 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-risk_assess_pkg.R | 148 - risk.assessr-4.1.0/risk.assessr/tests/testthat/test-risk_assess_pkg_lock_files.R | 5 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-set_up_pkg.R | 85 risk.assessr-4.1.0/risk.assessr/tests/testthat/test-skip_conditions.R |only risk.assessr-4.1.0/risk.assessr/tests/testthat/test-unpack_tarball.R | 280 + risk.assessr-4.1.0/risk.assessr/tests/testthat/test-utils.R | 84 risk.assessr-4.1.0/risk.assessr/vignettes/get-package-host.Rmd | 2 risk.assessr-4.1.0/risk.assessr/vignettes/risk.assessr_metric.Rmd | 4 124 files changed, 6310 insertions(+), 2396 deletions(-)
Title: Restricted Statistical Estimation and Inference for Linear
Models
Description: Allow for easy-to-use testing or evaluating of linear equality and inequality restrictions about parameters and effects in (generalized) linear statistical models.
Author: Leonard Vanbrabant [aut, cre],
Rebecca Kuiper [aut],
Yves Rosseel [ctb],
Aleksandra Dacko [ctb]
Maintainer: Leonard Vanbrabant <info@restriktor.org>
Diff between restriktor versions 0.6-30 dated 2026-02-05 and 0.6-50 dated 2026-06-11
DESCRIPTION | 7 MD5 | 55 +-- NAMESPACE | 7 R/compute_chiBarSquare_weights.R | 113 +++--- R/conLM.R | 4 R/con_constraints.R | 14 R/con_loglik.R | 6 R/con_pvalue.R | 2 R/ext_ic_infer.R | 172 +++++++--- R/goric.R | 76 ++++ R/goric_benchmark.R | 1 R/goric_benchmark_plot.R | 38 -- R/goric_benchmark_print.R | 4 R/goric_evSyn.R | 338 +++++++++++++------ R/goric_evSyn_leave1studyout.R |only R/goric_evSyn_plot.R | 80 +++- R/goric_evSyn_print.R | 51 +- R/goric_evSyn_summary.R | 200 ++++++----- R/goric_evSyn_utilities.R | 33 + R/goric_print.R | 8 R/goric_utilities.R | 2 R/utilities.R | 20 - inst/doc/Guidelines_GORIC-benchmarks.html | 411 ++++++++++++------------ inst/doc/Guidelines_GORIC_output.html | 49 +- inst/doc/Tutorial_GORICA_restriktor_lavaan.html | 23 - inst/doc/Tutorial_GORIC_restriktor_evSyn.html | 59 ++- man/evSyn.Rd | 108 +++++- man/goric.Rd | 8 man/restriktor-package.rd | 4 29 files changed, 1173 insertions(+), 720 deletions(-)
Title: Conservation Planning Datasets
Description: Conservation planning datasets for learning how to use the
'prioritizr' package <https://CRAN.R-project.org/package=prioritizr>.
Author: Jeffrey O Hanson [aut] ,
Richard Schuster [aut, cre] ,
Nina Morrell [aut],
Matthew Strimas-Mackey [aut] ,
Kristine Camille V Buenafe [aut] ,
Matthew E Watts [aut],
Peter Arcese [aut] ,
Joseph R Bennett [aut] ,
Hugh P Possingham [aut]
Maintainer: Richard Schuster <richard.schuster@glel.carleton.ca>
Diff between prioritizrdata versions 0.3.2 dated 2023-04-06 and 0.3.3 dated 2026-06-11
DESCRIPTION | 31 - MD5 | 42 + NAMESPACE | 27 - R/deprecated.R |only R/package.R | 65 +- R/salt_data.R | 232 +++++----- R/tas_data.R | 282 ++++++------ R/wa_data.R | 376 ++++++++++------- README.md | 130 ++--- build/partial.rdb |binary inst/extdata/wa_attr_data.rds |only inst/extdata/wa_carbon.tif |only inst/extdata/wa_features_names.txt | 792 ++++++++++++++++++------------------ inst/scripts |only man/prioritizrdata-deprecated.Rd |only man/prioritizrdata.Rd | 87 ++- man/salt_data.Rd | 194 ++++---- man/tas_data.Rd | 168 +++---- man/wa_data.Rd | 306 ++++++++----- tests/testthat.R | 6 tests/testthat/helper_nonNA_cells.R | 6 tests/testthat/test_deprecated.R |only tests/testthat/test_salt_data.R | 82 +-- tests/testthat/test_tas_data.R | 44 +- tests/testthat/test_wa_data.R | 179 ++++---- 25 files changed, 1636 insertions(+), 1413 deletions(-)
More information about prioritizrdata at CRAN
Permanent link
Title: Test for Discretized Normality in Ordinal Data
Description: Tests whether multivariate ordinal data may stem from discretizing a multivariate normal distribution.
The test is described by Foldnes and Grønneberg (2019) <doi:10.1080/10705511.2019.1673168>.
In addition, an adjusted polychoric correlation estimator is provided that takes marginal knowledge into account,
as described by Grønneberg and Foldnes (2022) <doi:10.1037/met0000495>.
Author: Njal Foldnes [aut, cre],
Steffen Groenneberg [aut]
Maintainer: Njal Foldnes <njal.foldnes@gmail.com>
Diff between discnorm versions 0.2.1 dated 2022-05-25 and 0.2.2 dated 2026-06-11
DESCRIPTION | 11 +- MD5 | 25 +++--- NEWS.md | 24 +++++- R/bootTest.R | 20 +++-- R/catLSadj.R | 48 +++++++----- R/computeT.R | 2 R/pc_th.R | 2 build/vignette.rds |binary inst/CITATION | 43 +++++++---- inst/doc/discnormvignette.R | 2 inst/doc/discnormvignette.html | 156 +++++++++++++++++++++-------------------- tests |only 12 files changed, 197 insertions(+), 136 deletions(-)
Title: Tabular Matrix Problems via Pseudoinverse Estimation
Description: The Tabular Matrix Problems via Pseudoinverse Estimation (TMPinv)
is a two-stage estimation method that reformulates structured table-based
systems - such as allocation problems, transaction matrices, and
input-output tables - as structured least-squares problems. Based on the
Convex Least Squares Programming (CLSP) framework, TMPinv solves systems
with row and column constraints, block structure, and optionally reduced
dimensionality by (1) constructing a canonical constraint form and applying
a pseudoinverse-based projection, followed by (2) a convex-programming
refinement stage to improve fit, coherence, and regularization (e.g., via
Lasso, Ridge, or Elastic Net).
Author: Ilya Bolotov [aut, cre]
Maintainer: Ilya Bolotov <ilya.bolotov@vse.cz>
Diff between rtmpinv versions 1.1.0 dated 2026-06-07 and 2.0.0 dated 2026-06-11
DESCRIPTION | 8 ++++---- MD5 | 4 ++-- NEWS.md | 5 +++++ 3 files changed, 11 insertions(+), 6 deletions(-)
Title: A Modular Two-Step Convex Optimization Estimator for Ill-Posed
Problems
Description: Convex Least Squares Programming (CLSP) is a two-step estimator
for solving underdetermined, ill-posed, or structurally constrained
least-squares problems. It combines pseudoinverse-based estimation with
convex-programming correction methods inspired by Lasso, Ridge, and
Elastic Net to ensure numerical stability, constraint enforcement, and
interpretability. The package also provides numerical stability analysis
and CLSP-specific diagnostics, including partial R^2, normalized RMSE
(NRMSE), Monte Carlo t-tests for mean NRMSE, and condition-number-based
confidence bands.
Author: Ilya Bolotov [aut, cre]
Maintainer: Ilya Bolotov <ilya.bolotov@vse.cz>
Diff between rclsp versions 2.0.0 dated 2026-06-08 and 2.0.1 dated 2026-06-11
DESCRIPTION | 8 ++++---- MD5 | 2 +- 2 files changed, 5 insertions(+), 5 deletions(-)
Title: Prepare and Explore Data for Palaeobiological Analyses
Description: Provides functionality to support data preparation and exploration for
palaeobiological analyses, improving code reproducibility and accessibility. The
wider aim of 'palaeoverse' is to bring the palaeobiological community together
to establish agreed standards. The package currently includes functionality for
data cleaning, binning (time and space), exploration, summarisation and
visualisation. Reference datasets (i.e. Geological Time Scales <https://stratigraphy.org/chart/>)
and auxiliary functions are also provided. Details can be found in:
Jones et al., (2023) <doi: 10.1111/2041-210X.14099>.
Author: Lewis A. Jones [aut, cre] ,
William Gearty [aut] ,
Bethany J. Allen [aut] ,
Kilian Eichenseer [aut] ,
Christopher D. Dean [aut] ,
Etienne Bacher [aut] ,
Joseph T. Flannery-Sutherland [aut] ,
Sofia Galvan [ctb] ,
Miranta Kouvari [ctb] ,
Pedro L. Godoy [...truncated...]
Maintainer: Lewis A. Jones <LewisA.Jones@outlook.com>
Diff between palaeoverse versions 1.4.0 dated 2024-10-14 and 1.5.0 dated 2026-06-11
DESCRIPTION | 64 MD5 | 196 NAMESPACE | 11 NEWS.md | 129 R/axis_geo.R | 736 R/bin_lat.R | 38 R/bin_space.R | 127 R/bin_time.R | 538 R/data.R | 6 R/group_apply.R | 110 R/lat_bins_area.R | 43 R/lat_bins_degrees.R | 62 R/look_up.R | 317 R/palaeorotate.R | 216 R/phylo_check.R | 50 R/release.R | 1 R/tax_certainty.R |only R/tax_check.R | 151 R/tax_expand_lat.R | 22 R/tax_expand_time.R | 39 R/tax_range_space.R | 106 R/tax_range_strat.R | 342 R/tax_range_time.R | 316 R/tax_unique.R | 122 R/time_bins.R | 378 README.md | 212 build/partial.rdb |binary build/vignette.rds |binary inst/CITATION | 18 inst/WORDLIST |only inst/doc/phanerozoic-reefs.Rmd | 4 inst/doc/phanerozoic-reefs.html | 15 inst/doc/structure-and-standards.R | 146 inst/doc/structure-and-standards.Rmd | 6 inst/doc/structure-and-standards.html | 15 inst/doc/tetrapod-biodiversity.Rmd | 32 inst/doc/tetrapod-biodiversity.html | 41 man/GTS2012.Rd | 2 man/GTS2020.Rd | 2 man/axis_geo.Rd | 64 man/group_apply.Rd | 16 man/interval_key.Rd | 2 man/palaeoverse-package.Rd | 10 man/phylo_check.Rd | 2 man/tax_certainty.Rd |only man/tax_range_strat.Rd | 22 man/tax_range_time.Rd | 20 man/time_bins.Rd | 27 tests/testthat.R | 8 tests/testthat/Rplots.pdf |binary tests/testthat/_snaps/axis_geo.md |only tests/testthat/_snaps/axis_geo/axis-geo-on-multiple-sides.svg | 306 tests/testthat/_snaps/axis_geo/axis-geo-with-autofit.svg |only tests/testthat/_snaps/axis_geo/axis-geo-with-autofit2.svg |only tests/testthat/_snaps/axis_geo/axis-geo-with-backwards-ultrametric-tree.svg | 63 tests/testthat/_snaps/axis_geo/axis-geo-with-downwards-fossil-tree.svg | 69 tests/testthat/_snaps/axis_geo/axis-geo-with-fossil-tree.svg | 69 tests/testthat/_snaps/axis_geo/axis-geo-with-multiple-scales.svg | 20 tests/testthat/_snaps/axis_geo/axis-geo-with-negative-axis.svg |only tests/testthat/_snaps/axis_geo/axis-geo-with-time-bins-scale.svg | 8814 +++++----- tests/testthat/_snaps/axis_geo/axis-geo-with-title.svg |only tests/testthat/_snaps/axis_geo/axis-geo-with-ultrametric-tree.svg | 60 tests/testthat/_snaps/axis_geo/axis-geo.svg | 20 tests/testthat/_snaps/bin_lat.md |only tests/testthat/_snaps/bin_space.md |only tests/testthat/_snaps/bin_time.md |only tests/testthat/_snaps/group_apply.md |only tests/testthat/_snaps/lat_bins_area.md |only tests/testthat/_snaps/lat_bins_degrees.md |only tests/testthat/_snaps/look_up.md |only tests/testthat/_snaps/palaeorotate.md |only tests/testthat/_snaps/phylo_check.md |only tests/testthat/_snaps/tax_check.md |only tests/testthat/_snaps/tax_expand_lat.md |only tests/testthat/_snaps/tax_expand_time.md |only tests/testthat/_snaps/tax_range_space.md |only tests/testthat/_snaps/tax_range_strat.md |only tests/testthat/_snaps/tax_range_strat/tax-range-strat-does-uncertainty.svg | 52 tests/testthat/_snaps/tax_range_strat/tax-range-strat-labels.svg | 44 tests/testthat/_snaps/tax_range_strat/tax-range-strat-plots-groups.svg |only tests/testthat/_snaps/tax_range_strat/tax-range-strat-plots.svg | 44 tests/testthat/_snaps/tax_range_strat/tax-range-strat-sorts.svg | 44 tests/testthat/_snaps/tax_range_strat/tax-range-strat-stops-some-plot-args.svg |only tests/testthat/_snaps/tax_range_time.md |only tests/testthat/_snaps/tax_unique.md |only tests/testthat/_snaps/time_bins.md |only tests/testthat/helper-vdiffr.R | 6 tests/testthat/setup-data.R | 8 tests/testthat/test-axis_geo.R | 253 tests/testthat/test-bin_lat.R | 80 tests/testthat/test-bin_space.R | 118 tests/testthat/test-bin_time.R | 239 tests/testthat/test-group_apply.R | 191 tests/testthat/test-lat_bins_area.R | 17 tests/testthat/test-lat_bins_degrees.R | 16 tests/testthat/test-look_up.R | 159 tests/testthat/test-palaeorotate.R | 206 tests/testthat/test-phylo_check.R | 41 tests/testthat/test-tax_certainty.R |only tests/testthat/test-tax_check.R | 77 tests/testthat/test-tax_expand_lat.R | 108 tests/testthat/test-tax_expand_time.R | 120 tests/testthat/test-tax_range_space.R | 141 tests/testthat/test-tax_range_strat.R | 204 tests/testthat/test-tax_range_time.R | 42 tests/testthat/test-tax_unique.R | 432 tests/testthat/test-time_bins.R | 283 vignettes/alpha-div-plot-2-1.png |binary vignettes/phanerozoic-reefs.Rmd | 4 vignettes/source/_phanerozoic-reefs.Rmd | 2 vignettes/source/_tetrapod-biodiversity.Rmd | 14 vignettes/structure-and-standards.Rmd | 6 vignettes/tetrapod-biodiversity.Rmd | 32 113 files changed, 9698 insertions(+), 7490 deletions(-)
Title: Machine Learning in R - Next Generation
Description: Efficient, object-oriented programming on the
building blocks of machine learning. Provides 'R6' objects for tasks,
learners, resamplings, and measures. The package is geared towards
scalability and larger datasets by supporting parallelization and
out-of-memory data-backends like databases. While 'mlr3' focuses on
the core computational operations, add-on packages provide additional
functionality.
Author: Michel Lang [aut] ,
Bernd Bischl [aut] ,
Jakob Richter [aut] ,
Patrick Schratz [aut] ,
Giuseppe Casalicchio [ctb] ,
Stefan Coors [ctb] ,
Quay Au [ctb] ,
Martin Binder [aut],
Florian Pfisterer [aut] ,
Raphael Sonabend [aut] ,
Lennart Schneider [ctb] , [...truncated...]
Maintainer: Marc Becker <marcbecker@posteo.de>
Diff between mlr3 versions 1.7.0 dated 2026-06-10 and 1.7.1 dated 2026-06-11
DESCRIPTION | 6 +-- MD5 | 23 ++++++------ NEWS.md | 8 ++++ R/Learner.R | 11 +++-- R/LearnerClassif.R | 19 ++++++++- R/LearnerRegr.R | 16 +++++++- man/benchmark.Rd | 4 +- man/figures/block.png |only man/figures/block.svg |only man/figures/mlr3verse.svg |only man/resample.Rd | 4 +- tests/testthat/test_Learner.R | 28 ++++++++++++++ tests/testthat/test_LearnerClassif.R | 67 +++++++++++++++++++++++++++++++++++ tests/testthat/test_LearnerRegr.R | 48 +++++++++++++++++++++++++ 14 files changed, 208 insertions(+), 26 deletions(-)
Title: Graphics in the Context of Analyzing High-Throughput Data
Description: Additional options for making graphics in the context of analyzing high-throughput data are available here.
This includes automatic segmenting of the current device (eg window) to accommodate multiple new plots,
automatic checking for optimal location of legends in plots, small histograms to insert as legends,
histograms re-transforming axis labels to linear when plotting log2-transformed data,
a violin-plot <doi:10.1080/00031305.1998.10480559> function for a wide variety of input-formats,
principal components analysis (PCA) <doi:10.1080/14786440109462720> with bag-plots <doi:10.1080/00031305.1999.10474494> to highlight and compare the center areas for groups of samples,
generic MA-plots (differential- versus average-value plots) <doi:10.1093/nar/30.4.e15>,
staggered count plots and generation of mouse-over interactive html pages.
Author: Wolfgang Raffelsberger [aut, cre]
Maintainer: Wolfgang Raffelsberger <w.raffelsberger@gmail.com>
Diff between wrGraph versions 1.3.15 dated 2026-04-29 and 1.3.16 dated 2026-06-11
DESCRIPTION | 8 MD5 | 46 +-- R/MAplotW.R | 131 +++++---- R/VolcanoPlotW.R | 552 ++++++++++++++--------------------------- R/addBagPlot.R | 70 ++--- R/cumFrqPlot.R | 12 R/foldChangeArrow.R | 13 R/legendHist.R | 8 R/mouseOverHtmlFile.R | 43 +-- R/plotPCAw.R | 110 +++++--- R/profileAsClu.R | 28 +- build/vignette.rds |binary inst/doc/wrGraphVignette1.R | 6 inst/doc/wrGraphVignette1.Rmd | 41 +-- inst/doc/wrGraphVignette1.html | 163 ++++++------ man/MAplotW.Rd | 11 man/VolcanoPlotW.Rd | 36 +- man/addBagPlot.Rd | 39 +- man/cumFrqPlot.Rd | 13 man/foldChangeArrow.Rd | 2 man/mouseOverHtmlFile.Rd | 10 man/plotPCAw.Rd | 29 +- man/profileAsClu.Rd | 10 vignettes/wrGraphVignette1.Rmd | 41 +-- 24 files changed, 671 insertions(+), 751 deletions(-)
Title: Read and Play Digital Music (MIDI)
Description: Bindings to 'libfluidsynth' to parse and synthesize MIDI files. It can
read MIDI into a data frame, play it on the local audio device, or convert into
an audio file.
Author: Jeroen Ooms [aut, cre] ,
S. Christian Collins [cph]
Maintainer: Jeroen Ooms <jeroenooms@gmail.com>
Diff between fluidsynth versions 1.0.2 dated 2024-10-04 and 1.0.3 dated 2026-06-11
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- configure | 6 ++++++ src/init.c | 14 ++++++++++++-- 4 files changed, 25 insertions(+), 9 deletions(-)
Title: Client for Central Bank APIs
Description: A client for retrieving data and metadata from central bank
APIs including 'Banco de España' (BdE), 'Banco de Portugal' (BdP),
'Bank for International Settlements' (BIS), 'Bank of Canada' (BoC),
'Bank of England' (BoE), 'Bank of Japan' (BoJ), 'Banque de France'
(BdF), 'Czech National Bank' (CNB), 'Deutsche Bundesbank' (BBk),
'European Central Bank' (ECB), 'National Bank of Poland' (NBP),
'Norges Bank' (NoB), 'Oesterreichische Nationalbank' (OeNB), 'Sveriges
Riksbank' (SRb), and 'Swiss National Bank' (SNB).
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between bbk versions 0.10.0 dated 2026-05-16 and 0.11.0 dated 2026-06-11
DESCRIPTION | 17 +- MD5 | 188 +++++++++++++----------- NAMESPACE | 12 + NEWS.md | 22 ++ R/assertions.R | 18 +- R/bbk-package.R | 4 R/bbk.R | 150 +++++++++---------- R/bde.R | 51 +++--- R/bdf.R | 133 ++++++++++------- R/bdp.R | 114 +++++++------- R/bis.R | 68 ++++---- R/boc.R | 94 ++++++------ R/boe.R | 38 ++-- R/boj.R | 93 ++++++----- R/cache.R | 12 - R/cnb.R |only R/ecb.R | 84 +++++----- R/fx-rates.R | 34 ++-- R/nbp.R | 60 +++---- R/nob.R | 68 ++++---- R/onb.R | 109 +++++++------ R/purrr.R | 14 - R/sdmx.R | 28 ++- R/snb.R | 195 ++++++++++++++++++++----- R/srb.R | 88 +++++------ R/utils.R | 46 +++++ README.md | 10 - man/bbk-package.Rd | 2 man/bbk_data.Rd | 15 + man/bbk_dimension.Rd | 7 man/bbk_metadata.Rd | 7 man/bbk_series.Rd | 5 man/bde_data.Rd | 5 man/bde_latest.Rd | 5 man/bdf_codelist.Rd | 5 man/bdf_data.Rd | 5 man/bdf_dataset.Rd | 5 man/bdf_dimension.Rd |only man/bdp_data.Rd | 5 man/bdp_dataset.Rd | 7 man/bdp_dimension.Rd | 7 man/bdp_domain.Rd | 7 man/bdp_series.Rd | 7 man/bis_data.Rd | 5 man/bis_dimension.Rd | 7 man/bis_metadata.Rd | 7 man/boc_catalog.Rd | 4 man/boc_data.Rd | 9 - man/boe_data.Rd | 5 man/boj_data.Rd | 5 man/boj_metadata.Rd | 7 man/cnb_czeonia.Rd |only man/cnb_data.Rd |only man/cnb_dimension.Rd |only man/cnb_fx_other_rates.Rd |only man/cnb_fx_rates.Rd |only man/cnb_indicators.Rd |only man/cnb_pribor.Rd |only man/cnb_snapshots.Rd |only man/cnb_tree.Rd |only man/ecb_data.Rd | 5 man/ecb_dimension.Rd | 7 man/ecb_metadata.Rd | 7 man/figures/README-plotting-1.png |binary man/nbp_fx_rates.Rd | 5 man/nbp_gold.Rd | 5 man/nob_data.Rd | 5 man/nob_dimension.Rd | 7 man/nob_metadata.Rd | 7 man/onb_data.Rd | 5 man/onb_dimension.Rd | 7 man/onb_frequency.Rd | 7 man/onb_hierarchy.Rd | 7 man/onb_metadata.Rd | 7 man/onb_toc.Rd | 7 man/snb_data.Rd | 5 man/snb_dimension.Rd | 7 man/snb_metadata.Rd |only man/snb_toc.Rd |only man/srb_calendar.Rd | 7 man/srb_cross_rates.Rd | 5 man/srb_data.Rd | 5 man/srb_series.Rd | 7 tests/testthat/fixtures/bdf-dimension.rds |only tests/testthat/fixtures/cnb-arad-data.rds |only tests/testthat/fixtures/cnb-arad-dimension.rds |only tests/testthat/fixtures/cnb-fx-rates.rds |only tests/testthat/fixtures/cnb-pribor.rds |only tests/testthat/fixtures/snb-metadata.rds |only tests/testthat/fixtures/snb-toc.rds |only tests/testthat/test-bbk.R | 41 ++++- tests/testthat/test-bde.R | 12 - tests/testthat/test-bdf.R |only tests/testthat/test-bdp.R | 41 +++-- tests/testthat/test-bis.R | 36 +++- tests/testthat/test-boc.R |only tests/testthat/test-boe.R | 4 tests/testthat/test-boj.R | 22 +- tests/testthat/test-cnb.R |only tests/testthat/test-ecb.R | 32 +++- tests/testthat/test-exchange-rates.R | 4 tests/testthat/test-nbp.R | 16 +- tests/testthat/test-nob.R | 10 - tests/testthat/test-onb.R |only tests/testthat/test-sdmx.R | 19 ++ tests/testthat/test-snb.R | 61 +++++++ tests/testthat/test-srb.R | 22 +- 107 files changed, 1504 insertions(+), 833 deletions(-)
Title: Analysis of Basketball Data
Description: Collection of tools to work with European basketball data. Functions available are related to friendly
web scraping, data management and visualization. Data were obtained from <https://www.euroleaguebasketball.net/euroleague/>,
<https://www.euroleaguebasketball.net/eurocup/> and <https://www.acb.com/>, following the instructions
of their respectives robots.txt files, when available. Box score data are available for the three leagues.
Play-by-play and spatial shooting data are also available for the Spanish league. Methods for analysis include a
population pyramid, 2D plots, circular plots of players' percentiles, plots of players' monthly/yearly stats,
team heatmaps, team shooting plots, team four factors plots, cross-tables with the results of regular season games,
maps of nationalities, combinations of lineups, possessions-related variables, timeouts,
performance by periods, personal fouls, offensive rebounds and different types of shooting charts.
Please see Vinue [...truncated...]
Author: Guillermo Vinue [aut, cre]
Maintainer: Guillermo Vinue <guillermo.vinue@uv.es>
Diff between BAwiR versions 1.5.1 dated 2026-06-04 and 1.5.2 dated 2026-06-11
DESCRIPTION | 8 ++-- MD5 | 26 ++++++------- NEWS | 6 +++ R/do_add_adv_stats.R | 14 ++++--- R/do_stats.R | 84 ++++++++++++++++++++++++++++++++---------- R/get_donut_usage.R | 15 +++++-- R/get_donut_usage_action.R | 4 +- R/get_net_rtg_on_off.R | 20 ++++++++-- inst/doc/BAwiR.html | 4 +- inst/doc/BAwiR_pbp.html | 4 +- inst/doc/BAwiR_sc.html | 4 +- man/get_donut_usage.Rd | 8 +++- man/get_donut_usage_action.Rd | 2 - man/get_net_rtg_on_off.Rd | 1 14 files changed, 139 insertions(+), 61 deletions(-)
Title: A 'shiny' Package for Data Analysis
Description: Provides a 'shiny' application with a user-friendly interface
for interactive data analysis. It supports exploratory data analysis
through descriptive statistics, data visualization, statistical
tests (e.g., normality assessment), linear modeling, data
import, transformation and reporting. For more details see Shapiro and Wilk
(1965) <doi:10.2307/2333709>.
Author: Luis Gustavo Schuck [aut, cre]
Maintainer: Luis Gustavo Schuck <luisgustavoschuck@yahoo.com.br>
Diff between spada versions 0.1.5 dated 2026-04-21 and 0.1.6 dated 2026-06-11
spada-0.1.5/spada/man/figures/articles |only spada-0.1.5/spada/man/figures/install_release.png |only spada-0.1.5/spada/man/figures/install_release_old.png |only spada-0.1.5/spada/man/figures/spada_loading.png |only spada-0.1.5/spada/man/figures/spada_logo.png |only spada-0.1.6/spada/DESCRIPTION | 21 spada-0.1.6/spada/MD5 | 148 ++-- spada-0.1.6/spada/NAMESPACE | 20 spada-0.1.6/spada/NEWS.md | 64 + spada-0.1.6/spada/R/about_spada_module.R | 8 spada-0.1.6/spada/R/calculate_cols_module.R | 16 spada-0.1.6/spada/R/config_module.R | 23 spada-0.1.6/spada/R/convert_cols_module.R | 42 - spada-0.1.6/spada/R/cor_matrix_module.R |only spada-0.1.6/spada/R/correlation_module.R | 35 spada-0.1.6/spada/R/data_highlights_module.R | 1 spada-0.1.6/spada/R/data_module.R | 11 spada-0.1.6/spada/R/duplicates_module.R |only spada-0.1.6/spada/R/exploratory_module.R | 14 spada-0.1.6/spada/R/export_file_module.R | 42 - spada-0.1.6/spada/R/filter_rows_module.R | 57 - spada-0.1.6/spada/R/frequencies_module.R |only spada-0.1.6/spada/R/groupby_module.R | 23 spada-0.1.6/spada/R/import_file_module.R | 7 spada-0.1.6/spada/R/insert_output_module.R | 21 spada-0.1.6/spada/R/join_module.R | 6 spada-0.1.6/spada/R/lm_module.R | 7 spada-0.1.6/spada/R/navbar_df_info_module.R | 3 spada-0.1.6/spada/R/normality_test_module.R | 90 -- spada-0.1.6/spada/R/order_cols_module.R | 2 spada-0.1.6/spada/R/order_rows_module.R | 2 spada-0.1.6/spada/R/output_module.R | 77 +- spada-0.1.6/spada/R/rename_cols_module.R | 10 spada-0.1.6/spada/R/restore_session_module.R | 14 spada-0.1.6/spada/R/sidebar_module.R | 78 +- spada-0.1.6/spada/R/spada.R | 55 - spada-0.1.6/spada/R/spada_server.R | 40 - spada-0.1.6/spada/R/spada_themes.R | 123 ++- spada-0.1.6/spada/R/spada_ui.R | 9 spada-0.1.6/spada/R/stats_table_module.R | 18 spada-0.1.6/spada/R/summarise_module.R | 7 spada-0.1.6/spada/R/table_values_module.R | 98 +- spada-0.1.6/spada/R/utils.R | 370 ++++++++-- spada-0.1.6/spada/R/z_test_module.R | 53 - spada-0.1.6/spada/R/zzz.R | 52 - spada-0.1.6/spada/README.md | 94 +- spada-0.1.6/spada/inst/doc/spada.Rmd | 22 spada-0.1.6/spada/inst/doc/spada.html | 63 + spada-0.1.6/spada/inst/www |only spada-0.1.6/spada/man/figures/data.png |only spada-0.1.6/spada/man/figures/export.png |only spada-0.1.6/spada/man/figures/highlights.png |only spada-0.1.6/spada/man/figures/import.png |only spada-0.1.6/spada/man/figures/logo.png |binary spada-0.1.6/spada/man/figures/metadata.png |only spada-0.1.6/spada/man/figures/navbar_active_dataset.png |only spada-0.1.6/spada/man/figures/overview.png |only spada-0.1.6/spada/man/spada.Rd | 2 spada-0.1.6/spada/tests/testthat/test-about_spada_module.R | 2 spada-0.1.6/spada/tests/testthat/test-calculate_cols_module.R | 9 spada-0.1.6/spada/tests/testthat/test-config_module.R | 24 spada-0.1.6/spada/tests/testthat/test-convert_cols_module.R | 46 - spada-0.1.6/spada/tests/testthat/test-cor_matrix_module.R |only spada-0.1.6/spada/tests/testthat/test-data_module.R | 27 spada-0.1.6/spada/tests/testthat/test-duplicates_module.R |only spada-0.1.6/spada/tests/testthat/test-export_file_module.R | 61 + spada-0.1.6/spada/tests/testthat/test-filter_rows_module.R | 18 spada-0.1.6/spada/tests/testthat/test-frequencies_module.R |only spada-0.1.6/spada/tests/testthat/test-join_module.R | 2 spada-0.1.6/spada/tests/testthat/test-navbar_df_info_module.R | 20 spada-0.1.6/spada/tests/testthat/test-order_cols_module.R | 2 spada-0.1.6/spada/tests/testthat/test-order_rows_module.R | 2 spada-0.1.6/spada/tests/testthat/test-output_module.R | 9 spada-0.1.6/spada/tests/testthat/test-restore_session_module.R | 2 spada-0.1.6/spada/tests/testthat/test-sidebar_module.R | 34 spada-0.1.6/spada/tests/testthat/test-table_values_module.R | 10 spada-0.1.6/spada/tests/testthat/test-utils.R | 11 spada-0.1.6/spada/vignettes/spada.Rmd | 22 78 files changed, 1389 insertions(+), 760 deletions(-)
Title: Cluster Extension for 'mlr3'
Description: Extends the 'mlr3' package with cluster analysis.
Author: Maximilian Muecke [aut, cre] ,
Damir Pulatov [aut],
Michel Lang [aut] ,
Marc Becker [ctb]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between mlr3cluster versions 0.3.0 dated 2026-03-01 and 0.4.0 dated 2026-06-11
mlr3cluster-0.3.0/mlr3cluster/R/MeasureClustInternal.R |only mlr3cluster-0.4.0/mlr3cluster/DESCRIPTION | 38 - mlr3cluster-0.4.0/mlr3cluster/MD5 | 230 +++--- mlr3cluster-0.4.0/mlr3cluster/NAMESPACE | 9 mlr3cluster-0.4.0/mlr3cluster/NEWS.md | 42 + mlr3cluster-0.4.0/mlr3cluster/R/LearnerClust.R | 18 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustAffinityPropagation.R | 24 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustAgnes.R | 33 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustBICO.R | 3 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustBIRCH.R | 3 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustCLARA.R | 19 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustCMeans.R | 31 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustCobweb.R | 10 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustDBSCAN.R | 5 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustDBSCANfpc.R | 9 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustDiana.R | 38 - mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustEM.R | 13 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustFanny.R | 26 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustFarthestFirst.R | 11 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustFeatureless.R | 25 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustFlexmix.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustGenie.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustHDBSCAN.R | 8 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustHclust.R | 16 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustKCCA.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustKKMeans.R | 48 - mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustKMeans.R | 15 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustKProto.R | 20 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustMclust.R | 16 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustMeanShift.R | 16 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustMiniBatchKMeans.R | 29 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustMovMF.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustOPTICS.R | 5 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustPAM.R | 31 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustProtoclust.R | 18 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustSKMeans.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustSOM.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustSTDBSCAN.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustSimpleKMeans.R | 11 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustSpectral.R | 19 mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustTclust.R |only mlr3cluster-0.4.0/mlr3cluster/R/LearnerClustXMeans.R | 11 mlr3cluster-0.4.0/mlr3cluster/R/MeasureClust.R | 5 mlr3cluster-0.4.0/mlr3cluster/R/MeasureClustSimple.R |only mlr3cluster-0.4.0/mlr3cluster/R/PredictionClust.R | 5 mlr3cluster-0.4.0/mlr3cluster/R/PredictionDataClust.R | 8 mlr3cluster-0.4.0/mlr3cluster/R/TaskClust.R | 3 mlr3cluster-0.4.0/mlr3cluster/R/as_prediction_clust.R | 15 mlr3cluster-0.4.0/mlr3cluster/R/as_task_clust.R | 8 mlr3cluster-0.4.0/mlr3cluster/R/bibentries.R | 338 ++++++++-- mlr3cluster-0.4.0/mlr3cluster/R/cluster_stats.R |only mlr3cluster-0.4.0/mlr3cluster/R/helper.R | 19 mlr3cluster-0.4.0/mlr3cluster/R/measures.R | 22 mlr3cluster-0.4.0/mlr3cluster/R/zzz.R | 44 - mlr3cluster-0.4.0/mlr3cluster/README.md | 5 mlr3cluster-0.4.0/mlr3cluster/build/partial.rdb |binary mlr3cluster-0.4.0/mlr3cluster/man/LearnerClust.Rd | 165 ++-- mlr3cluster-0.4.0/mlr3cluster/man/MeasureClust.Rd | 107 +-- mlr3cluster-0.4.0/mlr3cluster/man/PredictionClust.Rd | 110 +-- mlr3cluster-0.4.0/mlr3cluster/man/TaskClust.Rd | 119 +-- mlr3cluster-0.4.0/mlr3cluster/man/mlr3cluster-package.Rd | 1 mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.MBatchKMeans.Rd | 103 +-- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.SimpleKMeans.Rd | 98 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.agnes.Rd | 120 ++- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.ap.Rd | 114 ++- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.bico.Rd | 93 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.birch.Rd | 93 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.clara.Rd | 113 +-- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.cmeans.Rd | 99 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.cobweb.Rd | 98 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.dbscan.Rd | 93 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.dbscan_fpc.Rd | 93 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.diana.Rd | 121 ++- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.em.Rd | 96 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.fanny.Rd | 120 ++- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.featureless.Rd | 96 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.ff.Rd | 98 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.flexmix.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.genie.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.hclust.Rd | 95 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.hdbscan.Rd | 96 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.kcca.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.kkmeans.Rd | 101 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.kmeans.Rd | 99 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.kproto.Rd | 116 ++- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.mclust.Rd | 114 ++- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.meanshift.Rd | 108 +-- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.movMF.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.optics.Rd | 93 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.pam.Rd | 119 ++- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.protoclust.Rd | 99 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.skmeans.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.som.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.specc.Rd | 101 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.stdbscan.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.tclust.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_learners_clust.xmeans.Rd | 100 +- mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.avg_between.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.avg_within.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.ch.Rd | 39 - mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.davies_bouldin.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.dunn.Rd | 43 - mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.dunn2.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.entropy.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.pearsongamma.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.silhouette.Rd | 45 + mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.wb_ratio.Rd |only mlr3cluster-0.4.0/mlr3cluster/man/mlr_measures_clust.wss.Rd | 34 - mlr3cluster-0.4.0/mlr3cluster/man/mlr_tasks_ruspini.Rd | 4 mlr3cluster-0.4.0/mlr3cluster/man/mlr_tasks_usarrests.Rd | 4 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/_snaps |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/helper.R | 15 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/helper_expectations.R | 6 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_LearnerClust.R | 9 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_MeasureClust.R | 59 + mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_PredictionClust.R | 28 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_cluster_stats.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_cmeans.R | 1 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_dbscan.R | 2 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_dbscan_fpc.R | 2 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_featureless.R | 9 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_flexmix.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_genie.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_kcca.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_kkmeans.R | 3 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_kmeans.R | 1 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_kproto.R | 2 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_movMF.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_optics.R | 2 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_skmeans.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_som.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_spectral.R | 2 mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_stdbscan.R |only mlr3cluster-0.4.0/mlr3cluster/tests/testthat/test_mlr_learners_clust_tclust.R |only 134 files changed, 3092 insertions(+), 1931 deletions(-)
Title: Calculate Urinary Saturation with the EQUIL2 Algorithm
Description: Saturation of ionic substances in urine is calculated based on
sodium, potassium, calcium, magnesium, ammonia, chloride, phosphate, sulfate,
oxalate, citrate, ph, and urate. This program is intended for research use,
only. The code within is translated from EQUIL2 Visual Basic code based on
Werness, et al (1985) "EQUIL2: a BASIC computer program for the calculation
of urinary saturation" <doi:10.1016/s0022-5347(17)47703-2> to R. The Visual
Basic code was kindly provided by Dr. John Lieske of the Mayo Clinic.
Author: Bill Denney [aut, cre, cph] ,
John Lieske [cph]
Maintainer: Bill Denney <wdenney@humanpredictions.com>
Diff between equil2 versions 1.0.0 dated 2022-12-20 and 1.1.0 dated 2026-06-11
DESCRIPTION | 13 +-- MD5 | 36 ++++++---- NAMESPACE | 1 NEWS.md | 37 ++++++++++ R/equil2.R | 28 +++++-- R/equil2_v1.R |only R/unit_setup.R | 12 ++- README.md | 24 +++--- build/vignette.rds |binary inst/CITATION | 54 ++++++++------- inst/WORDLIST | 48 +++++++++++++ inst/clsEquil2.bas.txt |only inst/doc/original-source-v1.R |only inst/doc/original-source-v1.Rmd |only inst/doc/original-source-v1.html |only inst/doc/original-source.Rmd | 103 ++++++++++++++++++++++++++++ inst/doc/original-source.html | 140 ++++++++++++++++++++++++++++++++++++++- man/equil2.Rd | 16 +++- man/equil2_v1.Rd |only tests/testthat/test-equil2.R | 84 ++++++++++++++++++++++- tests/testthat/test-equil2_v1.R |only vignettes/original-source-v1.Rmd |only vignettes/original-source.Rmd | 103 ++++++++++++++++++++++++++++ 23 files changed, 623 insertions(+), 76 deletions(-)
Title: BDEW Standard Load Profiles for Electricity and Gas
Description: Provides representative standard load profiles (SLPs) for
electricity and gas published by the German Association of Energy and Water
Industries (BDEW Bundesverband der Energie- und Wasserwirtschaft e.V.)
in a tidy format. The electricity profiles cover the 1999 profiles —
households (H0), commercial (G0–G6), and agriculture (L0–L2) — and the
updated 2025 profiles (H25, G25, L25, P25, S25), which additionally
represent households with photovoltaic systems and battery storage. An
interface generates an electricity load profile over a user-defined date
range. A second interface generates daily gas load profiles using the
BDEW/VKU/GEODE synthetic 'SigLinDe' procedure from daily temperatures and a
customer value ('Kundenwert'). The 1999 data and methodology are described
in VDEW (1999), "Repräsentative VDEW-Lastprofile",
<https://www.bdew.de/media/documents/1999_Repraesentative-VDEW-Lastprofile.pdf>.
The electricity generation algorithm is described in VDEW (2000), "Anwendung
der Rep [...truncated...]
Author: Markus Doering [aut, cre, cph]
Maintainer: Markus Doering <m4rkus.doering@gmail.com>
Diff between standardlastprofile versions 1.1.0 dated 2026-03-16 and 2.0.0 dated 2026-06-11
standardlastprofile-1.1.0/standardlastprofile/build |only standardlastprofile-1.1.0/standardlastprofile/data/slp.rda |only standardlastprofile-1.1.0/standardlastprofile/inst/doc |only standardlastprofile-1.1.0/standardlastprofile/tests/testthat/test-standardise_state_names.R |only standardlastprofile-1.1.0/standardlastprofile/vignettes |only standardlastprofile-2.0.0/standardlastprofile/DESCRIPTION | 44 standardlastprofile-2.0.0/standardlastprofile/MD5 | 96 standardlastprofile-2.0.0/standardlastprofile/NAMESPACE | 6 standardlastprofile-2.0.0/standardlastprofile/NEWS.md | 79 standardlastprofile-2.0.0/standardlastprofile/R/data.R | 21 standardlastprofile-2.0.0/standardlastprofile/R/plots.R | 1001 +++++++++- standardlastprofile-2.0.0/standardlastprofile/R/siglinde.R |only standardlastprofile-2.0.0/standardlastprofile/R/slp_electricity.R |only standardlastprofile-2.0.0/standardlastprofile/R/slp_gas.R |only standardlastprofile-2.0.0/standardlastprofile/R/slp_gas_kundenwert.R |only standardlastprofile-2.0.0/standardlastprofile/R/slp_gas_reference.R |only standardlastprofile-2.0.0/standardlastprofile/R/slp_generate.R | 378 --- standardlastprofile-2.0.0/standardlastprofile/R/slp_info.R | 128 + standardlastprofile-2.0.0/standardlastprofile/R/sysdata.rda |binary standardlastprofile-2.0.0/standardlastprofile/R/utils.R | 837 ++++++-- standardlastprofile-2.0.0/standardlastprofile/R/zzz.R |only standardlastprofile-2.0.0/standardlastprofile/README.md | 381 +-- standardlastprofile-2.0.0/standardlastprofile/data/slp_electricity_profiles.rda |only standardlastprofile-2.0.0/standardlastprofile/inst/WORDLIST | 123 + standardlastprofile-2.0.0/standardlastprofile/man/figures/README-H0_vs_2025-1.png |binary standardlastprofile-2.0.0/standardlastprofile/man/figures/README-bdew-1999-small_multiples-1.png |binary standardlastprofile-2.0.0/standardlastprofile/man/figures/README-bdew-2025-small_multiples-1.png |binary standardlastprofile-2.0.0/standardlastprofile/man/figures/README-slp_gas_cities-1.png |only standardlastprofile-2.0.0/standardlastprofile/man/figures/README-slp_gas_readme_plot-1.png |only standardlastprofile-2.0.0/standardlastprofile/man/slp.Rd | 99 standardlastprofile-2.0.0/standardlastprofile/man/slp_electricity.Rd |only standardlastprofile-2.0.0/standardlastprofile/man/slp_electricity_profiles.Rd |only standardlastprofile-2.0.0/standardlastprofile/man/slp_gas.Rd |only standardlastprofile-2.0.0/standardlastprofile/man/slp_gas_coefficients.Rd |only standardlastprofile-2.0.0/standardlastprofile/man/slp_gas_kundenwert.Rd |only standardlastprofile-2.0.0/standardlastprofile/man/slp_gas_siglinde.Rd |only standardlastprofile-2.0.0/standardlastprofile/man/slp_gas_weekday_factors.Rd |only standardlastprofile-2.0.0/standardlastprofile/man/slp_generate.Rd | 195 - standardlastprofile-2.0.0/standardlastprofile/man/slp_info.Rd | 37 standardlastprofile-2.0.0/standardlastprofile/man/standardlastprofile-package.Rd | 9 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-as_date.R | 12 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-dynamization_fun.R | 4 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-format_helpers.R | 18 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-get_15min_seq.R | 4 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-get_daily_sequence.R | 14 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-get_holidays.R | 62 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-get_period.R | 16 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-get_weekday.R | 12 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-get_wkday_period.R | 8 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-is_date.R | 8 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-match_profile.R | 33 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-paste_helpers.R | 8 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-readme.R | 6 standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-slp_electricity.R |only standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-slp_gas.R |only standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-slp_gas_kundenwert.R |only standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-slp_gas_reference.R |only standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-slp_gas_siglinde.R |only standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-slp_generate.R | 257 -- standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-slp_info.R | 130 - standardlastprofile-2.0.0/standardlastprofile/tests/testthat/test-vignette_examples.R | 8 61 files changed, 2522 insertions(+), 1512 deletions(-)
More information about standardlastprofile at CRAN
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Title: Analyze Results Generated by the 'SqueezeMeta' Pipeline
Description: 'SqueezeMeta' is a versatile pipeline for the automated analysis of metagenomics/metatranscriptomics data (<https://github.com/jtamames/SqueezeMeta>). This package provides functions loading 'SqueezeMeta' results into R, filtering them based on different criteria, and visualizing the results using basic plots. The 'SqueezeMeta' project (and any subsets of it generated by the different filtering functions) is parsed into a single object, whose different components (e.g. tables with the taxonomic or functional composition across samples, contig/gene abundance profiles) can be easily analyzed using other R packages such as 'vegan' or 'DESeq2'. The methods in this package are further described in Puente-Sánchez et al., (2020) <doi:10.1186/s12859-020-03703-2>.
Author: Fernando Puente-Sanchez [aut, cre],
Natalia Garcia-Garcia [aut]
Maintainer: Fernando Puente-Sanchez <fernando.puente.sanchez@slu.se>
This is a re-admission after prior archival of version 1.7.2 dated 2025-06-14
Diff between SQMtools versions 1.7.2 dated 2025-06-14 and 1.8.0 dated 2026-06-11
DESCRIPTION | 9 MD5 | 68 ++- NAMESPACE | 3 R/RecA.R | 2 R/aggregate_methods.R | 37 +- R/bin_methods.R | 25 - R/combineSQM.R | 277 +++++++--------- R/combineSQMlite.R | 32 + R/exportPathway.R | 2 R/exportSeqs.R | 2 R/ext_bindings.R | 14 R/extra_methods.R | 20 + R/figures.R | 265 +++++---------- R/loadSQM.R | 751 +++++++++++++++++++++++++++----------------- R/loadSQMlite.R | 31 - R/mostAbundant.R | 31 + R/subset_methods.R | 644 ++++++++++++++++++++++--------------- R/tax_methods.R |only data/CheckMProkaryote.RData |binary data/Hadza.RData |binary data/MGKOs.RData |binary data/MGOGs.RData |binary data/RecA.RData |binary data/USiCGs.RData |binary man/RecA.Rd | 3 man/combineSQM.Rd | 2 man/loadSQM.Rd | 13 man/mostAbundant.Rd | 8 man/plotBins.Rd | 19 - man/plotTaxonomy.Rd | 6 man/renameSamples.Rd |only man/subsetBins.Rd | 29 + man/subsetContigs.Rd | 3 man/subsetORFs.Rd | 2 man/subsetSamples.Rd | 10 man/subsetTax.Rd | 5 36 files changed, 1344 insertions(+), 969 deletions(-)
Title: Stochastic Data Envelopment Analysis
Description: Set of functions for Stochastic Data Envelopment Analysis. Chance constrained versions of radial, directional and additive DEA models are implemented, as long as super-efficiency models. See: Cooper, W.W.; Deng, H.; Huang, Z.; Li, S.X. (2002). <doi:10.1057/palgrave.jors.2601433>, Bolós, V.J.; Benítez, R.; Coll-Serrano, V. (2024) <doi:10.1016/j.orp.2024.100307>.
Author: Vicente Bolos [aut, cre],
Vicente Coll-Serrano [aut],
Rafael Benitez Suarez [aut]
Maintainer: Vicente Bolos <vicente.bolos@uv.es>
Diff between SdeaR versions 1.0.2 dated 2025-12-12 and 1.1.0 dated 2026-06-11
DESCRIPTION | 13 MD5 | 38 - NAMESPACE | 2 R/make_deadata_stoch.R | 27 - R/modelstoch_additive.R | 364 +++++++++++----- R/modelstoch_additive_p.R | 382 +++++++++++------ R/modelstoch_addsupereff.R | 470 ++++++++++++++------- R/modelstoch_dir.R | 847 ++++++++++++++++++++++++++------------ R/modelstoch_dir_dd.R | 751 +++++++++++++++++++++++---------- R/modelstoch_radial.R | 827 +++++++++++++++++++++++++------------ R/modelstoch_radial_supereff.R | 95 +++- build/partial.rdb |binary man/make_deadata_stoch.Rd | 24 - man/modelstoch_additive.Rd | 32 - man/modelstoch_additive_p.Rd | 34 - man/modelstoch_addsupereff.Rd | 32 - man/modelstoch_dir.Rd | 42 + man/modelstoch_dir_dd.Rd | 42 + man/modelstoch_radial.Rd | 84 ++- man/modelstoch_radial_supereff.Rd | 41 + 20 files changed, 2852 insertions(+), 1295 deletions(-)
Title: Insulin Sensitivity Indices Calculator
Description: Facilitates the calculation of 40 different insulin sensitivity
indices based on fasting, oral glucose tolerance test (OGTT), lipid
(adipose), tracer (palmitate and glycerol rate), and DXA (fat mass)
measurement values. Enables easy and accurate assessment of insulin
sensitivity, critical for understanding and managing metabolic disorders
like diabetes and obesity. Indices calculated are described in
Gastaldelli (2022) <doi:10.1002/oby.23503>,
Suleman (2024) <doi:10.1210/clinem/dgae275>, and
Lorenzo (2010) <doi:10.1210/jc.2010-1144>.
Author: Sufyan Suleman [aut, cre]
Maintainer: Sufyan Suleman <sufyansuleman@hotmail.com>
Diff between InsuSensCalc versions 0.0.1 dated 2024-04-04 and 0.1.0 dated 2026-06-11
DESCRIPTION | 27 ++- LICENSE | 2 MD5 | 29 +-- NEWS.md | 45 +++++ R/calc_indices.R | 55 ++---- R/example_data.R | 2 README.md | 225 +++++++++++++++++++++++++++ build/vignette.rds |binary inst/CITATION |only inst/doc/introduction.Rmd | 2 inst/doc/introduction.html | 9 - man/example_data.Rd | 86 +++++----- man/isi_calculator.Rd | 287 +++++++++++++++++------------------ tests/testthat/test-isi_calculator.R | 57 ++---- tests/testthat/test-isi_na.R |only tests/testthat/test-isi_values.R |only vignettes/introduction.Rmd | 2 17 files changed, 545 insertions(+), 283 deletions(-)
Title: R Interface to W3C Markup Validation Services
Description: R interface to a W3C Markup Validation service.
See <https://validator.w3.org/> for more information.
Author: Kurt Hornik [aut, cre]
Maintainer: Kurt Hornik <Kurt.Hornik@R-project.org>
Diff between W3CMarkupValidator versions 0.2-3 dated 2026-04-13 and 0.2-4 dated 2026-06-11
DESCRIPTION | 6 +++--- MD5 | 4 ++-- R/w3c.R | 15 ++++++++++++--- 3 files changed, 17 insertions(+), 8 deletions(-)
More information about W3CMarkupValidator at CRAN
Permanent link
Title: Approximate Bayesian Latent Variable Analysis
Description: Implements approximate Bayesian inference for Structural
Equation Models (SEM) using a custom adaptation of the Integrated
Nested Laplace Approximation (Rue et al., 2009)
<doi:10.1111/j.1467-9868.2008.00700.x> as described in Jamil and Rue
(2026a) <doi:10.48550/arXiv.2603.25690>. Provides a computationally
efficient alternative to Markov Chain Monte Carlo (MCMC) for Bayesian
estimation, allowing users to fit latent variable models using the
'lavaan' syntax. See also the companion paper on implementation and
workflows, Jamil and Rue (2026b) <doi:10.48550/arXiv.2604.00671>.
Author: Haziq Jamil [aut, cre, cph] ,
Havard Rue [ctb] ,
Alvin Bong [ctb]
Maintainer: Haziq Jamil <haziq.jamil@gmail.com>
Diff between INLAvaan versions 0.2.4 dated 2026-04-02 and 0.2.5 dated 2026-06-11
DESCRIPTION | 11 +-- MD5 | 51 +++++++------- NAMESPACE | 1 NEWS.md | 17 ++++ R/INLAvaan-package.R | 1 R/inlavaan.R | 23 +++--- R/lavaan-unexported.R | 97 +++++++++++++++++++++------- R/log-likelihood-and-grad.R | 8 +- R/method-diagnostics.R | 6 - R/method-fitmeasures.R | 51 ++++++++------ R/method-predict.R | 46 ++++++------- R/qsnorm_fast.R | 2 R/utils-compare_mcmc.R | 6 - R/zzz.R | 8 ++ README.md | 47 +++++-------- demo/00Index | 1 demo/acfa.R |only inst/CITATION | 6 - inst/doc/INLAvaan.html | 22 +++--- inst/doc/mediation.html | 8 +- man/acfa.Rd | 26 +++---- man/agrowth.Rd | 26 +++---- man/asem.Rd | 26 +++---- man/figures/README-fig-compare-poldem-1.png |binary man/inlavaan.Rd | 26 +++---- man/qsnorm_fast.Rd | 2 tests/testthat/test-priors.R | 16 ++-- 27 files changed, 295 insertions(+), 239 deletions(-)
Title: Miscellaneous Functions for Panel Data, Quantiles, and Printing
Results
Description: These are miscellaneous functions for working with panel data, quantiles, and printing results. For panel data, the package includes functions for making a panel data balanced (that is, dropping missing individuals that have missing observations in any time period), converting id numbers to row numbers, and to treat repeated cross sections as panel data under the assumption of rank invariance. For quantiles, there are functions to make distribution functions from a set of data points (this is particularly useful when a distribution function is created in several steps), to combine distribution functions based on some external weights, and to invert distribution functions. Finally, there are several other miscellaneous functions for obtaining weighted means, weighted distribution functions, and weighted quantiles; to generate summary statistics and their differences for two groups; and to add or drop covariates from formulas. Additional utilities support staggered treatment adoption [...truncated...]
Author: Brantly Callaway [aut, cre]
Maintainer: Brantly Callaway <brantly.callaway@uga.edu>
Diff between BMisc versions 1.4.8 dated 2025-02-04 and 1.4.9 dated 2026-06-11
BMisc-1.4.8/BMisc/R/utils-data-table.R |only BMisc-1.4.8/BMisc/R/zzz.R |only BMisc-1.4.9/BMisc/DESCRIPTION | 18 BMisc-1.4.9/BMisc/MD5 | 85 +-- BMisc-1.4.9/BMisc/NAMESPACE | 5 BMisc-1.4.9/BMisc/NEWS.md | 27 + BMisc-1.4.9/BMisc/R/BMisc.R | 413 +++++++++++------- BMisc-1.4.9/BMisc/R/imports.R | 4 BMisc-1.4.9/BMisc/README.md | 128 ++++- BMisc-1.4.9/BMisc/inst/CITATION | 2 BMisc-1.4.9/BMisc/man/BMisc.Rd | 5 BMisc-1.4.9/BMisc/man/TorF.Rd | 4 BMisc-1.4.9/BMisc/man/check_staggered.Rd | 10 BMisc-1.4.9/BMisc/man/combineDfs.Rd | 2 BMisc-1.4.9/BMisc/man/combine_ecdfs.Rd | 6 BMisc-1.4.9/BMisc/man/compare_binary.Rd | 5 BMisc-1.4.9/BMisc/man/cs2panel.Rd | 7 BMisc-1.4.9/BMisc/man/drop_collinear.Rd | 9 BMisc-1.4.9/BMisc/man/get_Yi1.Rd | 9 BMisc-1.4.9/BMisc/man/get_YiGmin1.Rd | 11 BMisc-1.4.9/BMisc/man/get_Yibar.Rd | 8 BMisc-1.4.9/BMisc/man/get_Yibar_pre.Rd | 10 BMisc-1.4.9/BMisc/man/get_Yit.Rd | 10 BMisc-1.4.9/BMisc/man/get_first_difference.Rd | 8 BMisc-1.4.9/BMisc/man/get_group.Rd | 10 BMisc-1.4.9/BMisc/man/get_lagYi.Rd | 8 BMisc-1.4.9/BMisc/man/get_list_element.Rd | 4 BMisc-1.4.9/BMisc/man/get_principal_components.Rd | 10 BMisc-1.4.9/BMisc/man/invert_ecdf.Rd | 7 BMisc-1.4.9/BMisc/man/lhs_vars.Rd | 2 BMisc-1.4.9/BMisc/man/orig2t.Rd | 5 BMisc-1.4.9/BMisc/man/panel2cs.Rd | 9 BMisc-1.4.9/BMisc/man/panel2cs2.Rd | 9 BMisc-1.4.9/BMisc/man/t2orig.Rd | 5 BMisc-1.4.9/BMisc/man/time_invariant_to_panel.Rd | 10 BMisc-1.4.9/BMisc/man/toformula.Rd | 2 BMisc-1.4.9/BMisc/man/weighted_checkfun.Rd | 5 BMisc-1.4.9/BMisc/man/weighted_combine_list.Rd | 5 BMisc-1.4.9/BMisc/man/weighted_ecdf.Rd | 7 BMisc-1.4.9/BMisc/man/weighted_mean.Rd | 6 BMisc-1.4.9/BMisc/man/weighted_quantile.Rd | 6 BMisc-1.4.9/BMisc/tests/testthat/helper-skip.R |only BMisc-1.4.9/BMisc/tests/testthat/test-BMisc.R | 47 +- BMisc-1.4.9/BMisc/tests/testthat/test-distributions.R |only BMisc-1.4.9/BMisc/tests/testthat/test-formula.R |only BMisc-1.4.9/BMisc/tests/testthat/test-panel.R |only BMisc-1.4.9/BMisc/tests/testthat/test-utils.R |only 47 files changed, 703 insertions(+), 240 deletions(-)
Title: Multivariate Exploratory Data Analysis and Data Mining
Description: Exploratory data analysis methods to summarize, visualize and describe datasets. The main principal component methods are available, those with the largest potential in terms of applications: principal component analysis (PCA) when variables are quantitative, correspondence analysis (CA) and multiple correspondence analysis (MCA) when variables are categorical, Multiple Factor Analysis when variables are structured in groups, etc. and hierarchical cluster analysis. F. Husson, S. Le and J. Pages (2017).
Author: Francois Husson [aut, cre] ,
Julie Josse [aut],
Sebastien Le [aut],
Jeremy Mazet [aut]
Maintainer: Francois Husson <francois.husson@institut-agro.fr>
Diff between FactoMineR versions 2.14 dated 2026-04-08 and 2.15 dated 2026-06-11
DESCRIPTION | 8 MD5 | 40 ++-- NAMESPACE | 1 R/CA.R | 57 +++-- R/FAMD.R | 8 R/HCPC.R | 21 +- R/MCA.R | 216 ++++++++++++++-------- R/MFA.R | 189 +++++++++++++------ R/PCA.R | 407 ++++++++++++++++++++++++++++------------- R/catdes.r | 447 ++++++++++++++++++++++++++++++++++------------ R/condes.r | 231 +++++++++++++---------- R/dimdesc.r | 3 R/print.CA.R | 13 - R/svd.triplet.R | 30 ++- build/vignette.rds |binary data/children.rda |binary data/poison.rda |binary data/poison.text.rda |binary inst/doc/clustering.html | 2 man/HCPC.Rd | 4 vignettes/FactoMineR.html | 2 21 files changed, 1133 insertions(+), 546 deletions(-)
Title: Tree Guided Machine Learning for Personalized Predictions and
Precision Diagnostics
Description: Generalization of the classification and regression tree (CART) model that partitions subjects into terminal nodes and tailors machine learning model to each terminal node.
Author: Yunro Chung [aut, cre]
Maintainer: Yunro Chung <yunro.chung@asu.edu>
Diff between tgml versions 0.4.0 dated 2026-01-22 and 0.5.0 dated 2026-06-11
DESCRIPTION | 8 ++++---- MD5 | 6 +++--- R/03c.rootML_bs.R | 1 - R/08b.continuousML.R | 4 ++++ 4 files changed, 11 insertions(+), 8 deletions(-)
Title: Penalized Linear Mixed Models for Correlated Data
Description: Fits penalized linear mixed models that correct for
unobserved confounding factors. 'plmmr' infers and corrects for the
presence of unobserved confounding effects such as population
stratification and environmental heterogeneity. It then fits a linear
model via penalized maximum likelihood. Originally designed for the
multivariate analysis of single nucleotide polymorphisms (SNPs)
measured in a genome-wide association study (GWAS), 'plmmr' eliminates
the need for subpopulation-specific analyses and post-analysis p-value
adjustments. Functions for the appropriate processing of 'PLINK'
files are also supplied. For examples, see the package homepage
<https://pbreheny.github.io/plmmr/>.
Author: Tabitha K. Peter [aut] ,
Anna C. Reisetter [aut] ,
Yujing Lu [aut],
Oscar A. Rysavy [aut] ,
Patrick J. Breheny [aut, cre]
Maintainer: Patrick J. Breheny <patrick-breheny@uiowa.edu>
Diff between plmmr versions 4.2.3 dated 2026-01-26 and 4.3.0 dated 2026-06-11
plmmr-4.2.3/plmmr/R/fbm2bm.R |only plmmr-4.2.3/plmmr/R/get_hostname.R |only plmmr-4.2.3/plmmr/R/penalties.R |only plmmr-4.2.3/plmmr/R/standardize_matrix.R |only plmmr-4.2.3/plmmr/R/subset_bigsnp.R |only plmmr-4.2.3/plmmr/inst/tinytest/_debug_standardization.R |only plmmr-4.2.3/plmmr/inst/tinytest/_penncath_mid_test.R |only plmmr-4.2.3/plmmr/inst/tinytest/_sign_flip_issue.R |only plmmr-4.2.3/plmmr/inst/tinytest/_test_big_cbind.R |only plmmr-4.2.3/plmmr/inst/tinytest/_test_fbm.R |only plmmr-4.2.3/plmmr/inst/tinytest/_test_process_plink.R |only plmmr-4.2.3/plmmr/inst/tinytest/_test_rotation_approach.R |only plmmr-4.2.3/plmmr/man/MCP.Rd |only plmmr-4.2.3/plmmr/man/SCAD.Rd |only plmmr-4.2.3/plmmr/man/fbm2bm.Rd |only plmmr-4.2.3/plmmr/man/get_hostname.Rd |only plmmr-4.2.3/plmmr/man/lasso.Rd |only plmmr-4.3.0/plmmr/DESCRIPTION | 19 plmmr-4.3.0/plmmr/MD5 | 271 ++++++------ plmmr-4.3.0/plmmr/NAMESPACE | 1 plmmr-4.3.0/plmmr/NEWS.md | 28 + plmmr-4.3.0/plmmr/R/add_predictors.R | 29 - plmmr-4.3.0/plmmr/R/align_ids.R | 25 - plmmr-4.3.0/plmmr/R/big_cbind.R | 9 plmmr-4.3.0/plmmr/R/coef-cv-plmm.R | 11 plmmr-4.3.0/plmmr/R/coef-plmm.R | 16 plmmr-4.3.0/plmmr/R/compute_blup.R |only plmmr-4.3.0/plmmr/R/construct_variance.R | 38 - plmmr-4.3.0/plmmr/R/count_constant_features.R | 10 plmmr-4.3.0/plmmr/R/count_cores.R | 3 plmmr-4.3.0/plmmr/R/create_design.R | 32 - plmmr-4.3.0/plmmr/R/create_design_filebacked.R | 90 ++-- plmmr-4.3.0/plmmr/R/create_design_in_memory.R | 8 plmmr-4.3.0/plmmr/R/create_log.R | 29 - plmmr-4.3.0/plmmr/R/cv-plmm.R | 165 +++---- plmmr-4.3.0/plmmr/R/cvf.R | 67 +-- plmmr-4.3.0/plmmr/R/data.R | 10 plmmr-4.3.0/plmmr/R/eigen_K.R | 27 - plmmr-4.3.0/plmmr/R/estimate_eta.R | 24 - plmmr-4.3.0/plmmr/R/find_example_data.R | 56 +- plmmr-4.3.0/plmmr/R/get_data.R | 25 - plmmr-4.3.0/plmmr/R/impute_snp_data.R | 106 ++--- plmmr-4.3.0/plmmr/R/index_samples.R | 27 - plmmr-4.3.0/plmmr/R/lam_names.R | 5 plmmr-4.3.0/plmmr/R/log_lik.R | 45 +- plmmr-4.3.0/plmmr/R/loss-plmm.R | 11 plmmr-4.3.0/plmmr/R/name_and_count_bigsnp.R | 45 +- plmmr-4.3.0/plmmr/R/plmm.R | 143 ++---- plmmr-4.3.0/plmmr/R/plmm_checks.R | 104 ++-- plmmr-4.3.0/plmmr/R/plmm_fit.R | 111 +++-- plmmr-4.3.0/plmmr/R/plmm_format.R | 40 + plmmr-4.3.0/plmmr/R/plmm_prep.R | 132 ++---- plmmr-4.3.0/plmmr/R/plot-cv-plmm.R | 40 + plmmr-4.3.0/plmmr/R/plot-plmm.R | 25 - plmmr-4.3.0/plmmr/R/predict-cv-plmm.R |only plmmr-4.3.0/plmmr/R/predict-plmm.R | 53 -- plmmr-4.3.0/plmmr/R/predict_within_cv.R | 48 -- plmmr-4.3.0/plmmr/R/pretty_time.R | 7 plmmr-4.3.0/plmmr/R/print-summary-cv-plmm.R | 8 plmmr-4.3.0/plmmr/R/print-summary-plmm.R | 8 plmmr-4.3.0/plmmr/R/process_delim.R | 56 -- plmmr-4.3.0/plmmr/R/process_plink.R | 139 ++---- plmmr-4.3.0/plmmr/R/read_data_files.R | 66 +-- plmmr-4.3.0/plmmr/R/read_plink_files.R | 42 -- plmmr-4.3.0/plmmr/R/relatedness_mat.R | 64 +-- plmmr-4.3.0/plmmr/R/rotate_filebacked.R | 29 - plmmr-4.3.0/plmmr/R/setup_lambda.R | 23 - plmmr-4.3.0/plmmr/R/standardize_filebacked.R | 48 +- plmmr-4.3.0/plmmr/R/standardize_in_memory.R |only plmmr-4.3.0/plmmr/R/subset_filebacked.R |only plmmr-4.3.0/plmmr/R/summary-cv-plmm.R | 38 - plmmr-4.3.0/plmmr/R/summary-plmm.R | 20 plmmr-4.3.0/plmmr/R/untransform.R | 20 plmmr-4.3.0/plmmr/R/untransform_delim.R | 23 - plmmr-4.3.0/plmmr/R/untransform_in_memory.R | 21 - plmmr-4.3.0/plmmr/R/untransform_plink.R | 23 - plmmr-4.3.0/plmmr/R/zzz.R | 2 plmmr-4.3.0/plmmr/README.md | 4 plmmr-4.3.0/plmmr/build/partial.rdb |binary plmmr-4.3.0/plmmr/build/vignette.rds |binary plmmr-4.3.0/plmmr/inst/CITATION | 20 plmmr-4.3.0/plmmr/inst/doc/getting-started.Rmd | 10 plmmr-4.3.0/plmmr/inst/doc/getting-started.html | 36 - plmmr-4.3.0/plmmr/inst/tinytest/test_cv.R | 65 ++- plmmr-4.3.0/plmmr/inst/tinytest/test_data.R |only plmmr-4.3.0/plmmr/inst/tinytest/test_plink.R |only plmmr-4.3.0/plmmr/inst/tinytest/test_plmm.R | 292 ++++++++------ plmmr-4.3.0/plmmr/man/add_predictors.Rd | 12 plmmr-4.3.0/plmmr/man/admix.Rd | 10 plmmr-4.3.0/plmmr/man/align_ids.Rd | 16 plmmr-4.3.0/plmmr/man/big_cbind.Rd | 6 plmmr-4.3.0/plmmr/man/coef.cv_plmm.Rd | 11 plmmr-4.3.0/plmmr/man/coef.plmm.Rd | 10 plmmr-4.3.0/plmmr/man/compute_blup.Rd |only plmmr-4.3.0/plmmr/man/construct_variance.Rd | 4 plmmr-4.3.0/plmmr/man/count_constant_features.Rd | 4 plmmr-4.3.0/plmmr/man/create_design.Rd | 27 - plmmr-4.3.0/plmmr/man/create_design_filebacked.Rd | 33 - plmmr-4.3.0/plmmr/man/create_design_in_memory.Rd | 2 plmmr-4.3.0/plmmr/man/create_log.Rd | 11 plmmr-4.3.0/plmmr/man/cv_plmm.Rd | 74 +-- plmmr-4.3.0/plmmr/man/cvf.Rd | 17 plmmr-4.3.0/plmmr/man/eigen_K.Rd | 17 plmmr-4.3.0/plmmr/man/estimate_eta.Rd | 14 plmmr-4.3.0/plmmr/man/find_example_data.Rd | 13 plmmr-4.3.0/plmmr/man/get_data.Rd | 22 - plmmr-4.3.0/plmmr/man/impute_snp_data.Rd | 27 - plmmr-4.3.0/plmmr/man/index_samples.Rd | 14 plmmr-4.3.0/plmmr/man/lam_names.Rd | 4 plmmr-4.3.0/plmmr/man/log_lik.Rd | 12 plmmr-4.3.0/plmmr/man/name_and_count_bigsnp.Rd | 20 plmmr-4.3.0/plmmr/man/plmm.Rd | 93 ++-- plmmr-4.3.0/plmmr/man/plmm_checks.Rd | 44 +- plmmr-4.3.0/plmmr/man/plmm_fit.Rd | 50 +- plmmr-4.3.0/plmmr/man/plmm_format.Rd | 43 +- plmmr-4.3.0/plmmr/man/plmm_loss.Rd | 7 plmmr-4.3.0/plmmr/man/plmm_prep.Rd | 48 +- plmmr-4.3.0/plmmr/man/plmmr-package.Rd | 5 plmmr-4.3.0/plmmr/man/plot.cv_plmm.Rd | 26 - plmmr-4.3.0/plmmr/man/plot.plmm.Rd | 9 plmmr-4.3.0/plmmr/man/predict.cv_plmm.Rd |only plmmr-4.3.0/plmmr/man/predict.plmm.Rd | 33 - plmmr-4.3.0/plmmr/man/predict_within_cv.Rd | 34 - plmmr-4.3.0/plmmr/man/pretty_time.Rd | 4 plmmr-4.3.0/plmmr/man/print.summary.cv_plmm.Rd | 5 plmmr-4.3.0/plmmr/man/process_delim.Rd | 28 - plmmr-4.3.0/plmmr/man/process_plink.Rd | 46 +- plmmr-4.3.0/plmmr/man/read_data_files.Rd | 22 - plmmr-4.3.0/plmmr/man/read_plink_files.Rd | 10 plmmr-4.3.0/plmmr/man/relatedness_mat.Rd | 19 plmmr-4.3.0/plmmr/man/rotate_filebacked.Rd | 15 plmmr-4.3.0/plmmr/man/setup_lambda.Rd | 26 - plmmr-4.3.0/plmmr/man/standardize_filebacked.Rd | 29 - plmmr-4.3.0/plmmr/man/standardize_in_memory.Rd | 10 plmmr-4.3.0/plmmr/man/subset_filebacked.Rd | 24 - plmmr-4.3.0/plmmr/man/summary.cv_plmm.Rd | 12 plmmr-4.3.0/plmmr/man/summary.plmm.Rd | 10 plmmr-4.3.0/plmmr/man/untransform.Rd | 8 plmmr-4.3.0/plmmr/man/untransform_delim.Rd | 16 plmmr-4.3.0/plmmr/man/untransform_in_memory.Rd | 10 plmmr-4.3.0/plmmr/man/untransform_plink.Rd | 16 plmmr-4.3.0/plmmr/man/unzip_example_data.Rd | 9 plmmr-4.3.0/plmmr/src/Makevars | 2 plmmr-4.3.0/plmmr/src/big_standardize.cpp | 4 plmmr-4.3.0/plmmr/src/plmm_init.c | 4 plmmr-4.3.0/plmmr/src/standardize.cpp | 2 plmmr-4.3.0/plmmr/src/utilities.cpp | 129 ------ plmmr-4.3.0/plmmr/src/utilities.h | 2 plmmr-4.3.0/plmmr/vignettes/getting-started.Rmd | 10 149 files changed, 2108 insertions(+), 2128 deletions(-)
Title: Asynchronous Disk-Based Representation of Massive Data
Description: Storing very large data objects on a local drive, while still making it possible to manipulate the data in an efficient manner.
Author: Adam Black [aut],
Egill Fridgeirsson [aut],
Martijn Schuemie [aut, cre],
Marc A. Suchard [aut],
Observational Health Data Science and Informatics [cph]
Maintainer: Martijn Schuemie <schuemie@ohdsi.org>
Diff between Andromeda versions 1.2.0 dated 2025-10-29 and 1.2.1 dated 2026-06-11
DESCRIPTION | 11 ++++++----- MD5 | 18 +++++++++--------- NEWS.md | 8 ++++++++ R/Andromeda.R | 2 +- R/Indices.R | 2 +- R/LoadingSaving.R | 2 +- R/Object.R | 2 +- R/Operations.R | 13 ++++++++++--- inst/doc/UsingAndromeda.html | 6 +++--- man/Andromeda-package.Rd | 1 + 10 files changed, 41 insertions(+), 24 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2023-12-12 0.1.0
Title: R Interface to the 'Uno' Nonlinear Optimization Solver
Description: Bindings to 'Uno' (Unifying Nonlinear Optimization), a C++ solver
for smooth nonlinearly constrained optimization. 'Uno' unifies Lagrange-Newton
methods, including sequential quadratic programming and interior-point
methods, by decomposing them into interacting building blocks
(constraint-relaxation, inequality-handling, Hessian, and globalization
strategies) that can be freely combined, either through options or through
presets that reproduce established solvers such as 'filterSQP' and 'IPOPT'.
The framework is described in Vanaret and Leyffer (2024)
<doi:10.48550/arXiv.2406.13454>.
Author: Balasubramanian Narasimhan [aut, cre],
Charlie Vanaret [aut, cph] ,
Sven Leyffer [aut, cph] ,
HiGHS development team [cph] ; see
inst/COPYRIGHTS)
Maintainer: Balasubramanian Narasimhan <naras@stanford.edu>
Diff between Uno versions 2.7.3 dated 2026-06-08 and 2.7.3-1 dated 2026-06-11
.Rinstignore |only DESCRIPTION | 7 ++++--- MD5 | 12 ++++++------ NEWS.md | 6 ++++++ configure | 23 ++++++++--------------- configure.win | 8 ++------ inst/build_highs.sh | 13 +++++++++---- inst/build_uno.sh | 20 ++++++++++++++++---- 8 files changed, 51 insertions(+), 38 deletions(-)
Title: A Unified Framework for Machine Learning Ensembles in Survival
Analysis
Description: Implements a Super Learner framework for right-censored survival data.
The package fits convex combinations of parametric, semiparametric, and machine
learning survival learners by minimizing cross-validated risk using inverse
probability of censoring weighting (IPCW). It provides tools for automated
hyperparameter grid search, high-dimensional variable screening, and evaluation
of prediction performance using metrics such as the Brier score, Uno's C-index,
and time-dependent area under the curve (AUC). Additional utilities support
model interpretation for survival ensembles, including Shapley additive
explanations (SHAP), and estimation of covariate-adjusted restricted mean
survival time (RMST) contrasts. The methodology is related to treatment-specific
survival curve estimation using machine learning described by Westling et al.
(2024) <doi:10.1080/01621459.2023.2205060>, and the unified
ensemble framework described in Lyu et al. (2026) <doi:10.64898/2026.03.11.711010>.
Author: Yue Lyu [aut, cre]
Maintainer: Yue Lyu <yuelyu0521@gmail.com>
This is a re-admission after prior archival of version 0.1.2 dated 2026-05-04
Diff between SuperSurv versions 0.1.2 dated 2026-05-04 and 0.1.7 dated 2026-06-11
SuperSurv-0.1.2/SuperSurv/inst/doc/scaleup-parallel.R |only SuperSurv-0.1.2/SuperSurv/inst/doc/scaleup-parallel.Rmd |only SuperSurv-0.1.2/SuperSurv/inst/doc/scaleup-parallel.html |only SuperSurv-0.1.2/SuperSurv/vignettes/scaleup-parallel.Rmd |only SuperSurv-0.1.7/SuperSurv/DESCRIPTION | 12 - SuperSurv-0.1.7/SuperSurv/MD5 | 102 +++++------- SuperSurv-0.1.7/SuperSurv/R/explainability.R | 30 +-- SuperSurv-0.1.7/SuperSurv/R/rmst.R | 8 SuperSurv-0.1.7/SuperSurv/R/wrapper.R | 12 - SuperSurv-0.1.7/SuperSurv/README.md | 23 +- SuperSurv-0.1.7/SuperSurv/build/vignette.rds |binary SuperSurv-0.1.7/SuperSurv/inst/doc/base-learner-rfsrc.R | 11 - SuperSurv-0.1.7/SuperSurv/inst/doc/base-learner-rfsrc.Rmd | 13 - SuperSurv-0.1.7/SuperSurv/inst/doc/causal-rmst.R | 8 SuperSurv-0.1.7/SuperSurv/inst/doc/causal-rmst.Rmd | 8 SuperSurv-0.1.7/SuperSurv/inst/doc/causal-rmst.html | 25 +- SuperSurv-0.1.7/SuperSurv/inst/doc/extending-supersurv.Rmd | 4 SuperSurv-0.1.7/SuperSurv/inst/doc/extending-supersurv.html | 4 SuperSurv-0.1.7/SuperSurv/inst/doc/installation.R | 3 SuperSurv-0.1.7/SuperSurv/inst/doc/installation.Rmd | 3 SuperSurv-0.1.7/SuperSurv/inst/doc/installation.html | 17 -- SuperSurv-0.1.7/SuperSurv/inst/doc/model-performance.R | 6 SuperSurv-0.1.7/SuperSurv/inst/doc/model-performance.Rmd | 7 SuperSurv-0.1.7/SuperSurv/inst/doc/model-performance.html | 31 ++- SuperSurv-0.1.7/SuperSurv/inst/doc/parametric-models.html | 2 SuperSurv-0.1.7/SuperSurv/inst/doc/screening-methods.R | 16 + SuperSurv-0.1.7/SuperSurv/inst/doc/screening-methods.Rmd | 16 + SuperSurv-0.1.7/SuperSurv/inst/doc/screening-methods.html | 24 +- SuperSurv-0.1.7/SuperSurv/inst/doc/shap-explanations.R | 65 ++++--- SuperSurv-0.1.7/SuperSurv/inst/doc/shap-explanations.Rmd | 37 ++-- SuperSurv-0.1.7/SuperSurv/inst/doc/shap-explanations.html | 63 +++---- SuperSurv-0.1.7/SuperSurv/inst/doc/supersurv-best.R | 6 SuperSurv-0.1.7/SuperSurv/inst/doc/supersurv-best.Rmd | 6 SuperSurv-0.1.7/SuperSurv/inst/doc/supersurv-best.html | 5 SuperSurv-0.1.7/SuperSurv/inst/doc/supersurv-ensemble.R | 6 SuperSurv-0.1.7/SuperSurv/inst/doc/supersurv-ensemble.Rmd | 6 SuperSurv-0.1.7/SuperSurv/inst/doc/supersurv-ensemble.html | 11 - SuperSurv-0.1.7/SuperSurv/man/explain_kernel.Rd | 3 SuperSurv-0.1.7/SuperSurv/man/plot_beeswarm.Rd | 4 SuperSurv-0.1.7/SuperSurv/man/plot_dependence.Rd | 3 SuperSurv-0.1.7/SuperSurv/man/plot_global_importance.Rd | 3 SuperSurv-0.1.7/SuperSurv/man/plot_marginal_rmst_curve.Rd | 4 SuperSurv-0.1.7/SuperSurv/man/plot_patient_waterfall.Rd | 3 SuperSurv-0.1.7/SuperSurv/man/plot_rmst_vs_obs.Rd | 4 SuperSurv-0.1.7/SuperSurv/man/surv.xgboost.Rd | 5 SuperSurv-0.1.7/SuperSurv/vignettes/base-learner-rfsrc.Rmd | 13 - SuperSurv-0.1.7/SuperSurv/vignettes/causal-rmst.Rmd | 8 SuperSurv-0.1.7/SuperSurv/vignettes/extending-supersurv.Rmd | 4 SuperSurv-0.1.7/SuperSurv/vignettes/installation.Rmd | 3 SuperSurv-0.1.7/SuperSurv/vignettes/model-performance.Rmd | 7 SuperSurv-0.1.7/SuperSurv/vignettes/screening-methods.Rmd | 16 + SuperSurv-0.1.7/SuperSurv/vignettes/shap-explanations.Rmd | 37 ++-- SuperSurv-0.1.7/SuperSurv/vignettes/supersurv-best.Rmd | 6 SuperSurv-0.1.7/SuperSurv/vignettes/supersurv-ensemble.Rmd | 6 54 files changed, 406 insertions(+), 313 deletions(-)
Title: NASCAR Race Data
Description: A collection of NASCAR race, driver, owner and manufacturer
data across the three major NASCAR divisions: NASCAR Cup Series, NXS,
and NASCAR Craftsman Truck Series. The curated
data begins with the 1949 season and is updated weekly during the
racing season. Explore race, season, or career performance for drivers,
teams, and manufacturers throughout NASCAR's history. Data was sourced
with permission from DriverAverages.com.
Author: Kyle Grealis [aut, cre] ,
Nick Triplett [ctb],
Gabriel Odom [ctb]
Maintainer: Kyle Grealis <kyle@kylegrealis.com>
Diff between nascaR.data versions 3.0.1 dated 2026-02-16 and 3.1.0 dated 2026-06-11
DESCRIPTION | 10 ++-- MD5 | 32 +++++++------ NAMESPACE | 1 NEWS.md | 15 ++++++ R/export.R |only R/r2_upload.R | 41 +++++++++++++---- README.md | 57 ++++++++++++++++++++++- build/vignette.rds |binary inst/CITATION | 2 inst/doc/a-race-winning-strategy.html | 22 ++++----- inst/doc/ingesting-nascar-data.R |only inst/doc/ingesting-nascar-data.Rmd |only inst/doc/ingesting-nascar-data.html |only inst/updates/cup_track_info.rda |binary inst/updates/nxs_track_info.rda |binary inst/updates/scraper.R | 81 ++++++++++++++++++++++++---------- inst/updates/truck_track_info.rda |binary man/export_series.Rd |only tests/testthat/test-data.R | 36 +++++++++++++++ vignettes/ingesting-nascar-data.Rmd |only 20 files changed, 232 insertions(+), 65 deletions(-)
Title: Translates R Help Documentation using Large Language Models
Description: Translates R help documentation on the fly by using a Large
Language model of your choice. If you are using 'RStudio' or
'Positron' the translated help will appear in the help pane.
Author: Edgar Ruiz [aut, cre],
Posit Software, PBC [cph, fnd]
Maintainer: Edgar Ruiz <edgar@posit.co>
Diff between lang versions 0.1.1 dated 2026-06-05 and 0.1.2 dated 2026-06-11
DESCRIPTION | 6 MD5 | 21 ++- NEWS.md | 6 R/lang-help.R | 8 + R/rd-translate.R | 10 + README.md | 233 ++++++++++++++++++----------------- man/lang_help.Rd | 8 + tests/testthat/_snaps/aaa-nosetup.md |only tests/testthat/_snaps/zzz-local.md |only tests/testthat/helper-utils.R | 10 + tests/testthat/rd |only tests/testthat/test-aaa-nosetup.R |only tests/testthat/test-zzz-local.R |only 13 files changed, 183 insertions(+), 119 deletions(-)
Title: R Client for the Interactive Brokers Client Portal API
Description: Provides a lightweight R interface to the Interactive Brokers (IBKR)
Client Portal REST API. Functions cover session management, account and portfolio
queries, market data retrieval, and order placement and cancellation. Requires a
locally running IBKR Client Portal Gateway.
Author: Nagappan Karuppiah [aut, cre]
Maintainer: Nagappan Karuppiah <ibkrcp@gmail.com>
Diff between ibkrcp versions 0.1.1 dated 2026-05-07 and 0.1.2 dated 2026-06-11
DESCRIPTION | 10 +- MD5 | 44 ++++----- NAMESPACE | 1 NEWS.md | 11 ++ R/orders.R | 14 +- R/portfolio.R | 25 ++--- R/session.R | 15 +++ R/utils.R | 14 ++ README.md | 48 ++++++---- man/ibkr_auth_status.Rd | 2 man/ibkr_cancel_order.Rd | 2 man/ibkr_get_price_history.Rd | 2 man/ibkr_live_orders.Rd | 2 man/ibkr_logout.Rd |only man/ibkr_ping.Rd | 2 man/ibkr_place_order.Rd | 2 man/ibkr_portfolio_accounts.Rd | 2 man/ibkr_portfolio_positions.Rd | 9 + man/ibkr_portfolio_summary.Rd | 2 tests/testthat/localhost-5000/v1/api/iserver/secdef/search-82afae-POST.json | 6 - tests/testthat/localhost-5000/v1/api/logout.json |only tests/testthat/localhost-5000/v1/api/portfolio2/U1234567/positions-c39a17.json | 8 + tests/testthat/test_portfolio.R | 8 + tests/testthat/test_session.R | 8 + 24 files changed, 155 insertions(+), 82 deletions(-)
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Title: Interface to the 'SymEngine' Library
Description: Provides an R interface to 'SymEngine' <https://github.com/symengine/>,
a standalone 'C++' library for fast symbolic manipulation. The package has functionalities
for symbolic computation like calculating exact mathematical expressions, solving
systems of linear equations and code generation.
Author: Jialin Ma [cre, aut],
Isuru Fernando [aut],
Xin Chen [aut]
Maintainer: Jialin Ma <marlin@inventati.org>
Diff between symengine versions 0.2.11 dated 2026-03-04 and 0.2.13 dated 2026-06-11
DESCRIPTION | 6 - MD5 | 12 +-- src/rbinding.cpp | 148 +++++++++++++++++++-------------------- src/upstream.tar |binary tools/bundle_symengine_source.sh | 2 tools/release_procedure.md | 52 +++++++++++-- tools/symengine_patch.diff | 14 +++ 7 files changed, 141 insertions(+), 93 deletions(-)
Title: R Interface to RESTful Web Services
Description: Models a RESTful service as if it were a nested R list.
Author: Michael Lawrence [aut, cre]
Maintainer: Michael Lawrence <lawremi@gmail.com>
Diff between restfulr versions 0.0.16 dated 2025-06-27 and 0.0.17 dated 2026-06-11
DESCRIPTION | 14 +++++++------- MD5 | 5 +++-- R/HTTP-class.R | 16 ++++++++++++---- inst/unitTests/test_HTTP.R |only 4 files changed, 22 insertions(+), 13 deletions(-)
Title: Nonlinear Mixed Effects Models in Population PK/PD, Plot
Functions
Description: Fit and compare nonlinear mixed-effects models in
differential equations with flexible dosing information commonly seen
in pharmacokinetics and pharmacodynamics (Almquist, Leander, and
Jirstrand 2015 <doi:10.1007/s10928-015-9409-1>). Differential equation
solving is by compiled C code provided in the 'rxode2' package (Wang,
Hallow, and James 2015 <doi:10.1002/psp4.12052>). This package is for
'ggplot2' plotting methods for 'nlmixr2' objects.
Author: Matthew Fidler [aut, cre] ,
Bill Denney [ctb] ,
Wenping Wang [aut],
Vipul Mann [aut]
Maintainer: Matthew Fidler <matthew.fidler@gmail.com>
Diff between nlmixr2plot versions 5.0.1 dated 2026-02-28 and 5.0.2 dated 2026-06-11
DESCRIPTION | 8 +- MD5 | 68 +++++++++++----------- NEWS.md | 4 + R/plot.nlmixr2.R | 2 README.md | 117 +++++++++++++++++++++++--------------- man/figures/README-example-1.png |binary man/figures/README-example-10.png |binary man/figures/README-example-11.png |binary man/figures/README-example-12.png |binary man/figures/README-example-13.png |binary man/figures/README-example-14.png |binary man/figures/README-example-15.png |binary man/figures/README-example-16.png |binary man/figures/README-example-17.png |binary man/figures/README-example-18.png |binary man/figures/README-example-19.png |binary man/figures/README-example-2.png |binary man/figures/README-example-20.png |binary man/figures/README-example-21.png |binary man/figures/README-example-22.png |binary man/figures/README-example-23.png |binary man/figures/README-example-24.png |binary man/figures/README-example-25.png |binary man/figures/README-example-26.png |binary man/figures/README-example-27.png |binary man/figures/README-example-28.png |binary man/figures/README-example-3.png |binary man/figures/README-example-4.png |binary man/figures/README-example-5.png |binary man/figures/README-example-6.png |binary man/figures/README-example-7.png |binary man/figures/README-example-8.png |binary man/figures/README-example-9.png |binary man/reexports.Rd | 2 tests/testthat/test-plots.R | 34 +++++++++++ 35 files changed, 149 insertions(+), 86 deletions(-)
Title: Vectorised Probability Distributions
Description: Vectorised distribution objects with tools for manipulating,
visualising, and using probability distributions. Designed to allow model
prediction outputs to return distributions rather than their parameters,
allowing users to directly interact with predictive distributions in a
data-oriented workflow. In addition to providing generic replacements for
p/d/q/r functions, other useful statistics can be computed including means,
variances, intervals, and highest density regions.
Author: Mitchell O'Hara-Wild [aut, cre] ,
Matthew Kay [aut] ,
Alex Hayes [aut] ,
Rob Hyndman [aut] ,
Earo Wang [ctb] ,
Vencislav Popov [ctb]
Maintainer: Mitchell O'Hara-Wild <mail@mitchelloharawild.com>
Diff between distributional versions 0.7.0 dated 2026-03-17 and 0.7.1 dated 2026-06-11
DESCRIPTION | 8 +- MD5 | 56 +++++++++---------- NEWS.md | 11 +++ R/dist_inflated.R | 22 +++++-- R/dist_truncated.R | 9 ++- R/distribution.R | 1 R/utils.R | 2 man/dist_categorical.Rd | 2 man/dist_dirichlet.Rd | 2 man/dist_f.Rd | 2 man/dist_gev.Rd | 2 man/dist_gh.Rd | 2 man/dist_gk.Rd | 2 man/dist_gpd.Rd | 2 man/dist_gumbel.Rd | 4 - man/dist_horseshoe.Rd | 2 man/dist_mixture.Rd | 2 man/dist_multinomial.Rd | 2 man/dist_multivariate_normal.Rd | 4 - man/dist_multivariate_t.Rd | 2 man/dist_poisson_inverse_gaussian.Rd | 4 - man/dist_sample.Rd | 2 man/dist_student_t.Rd | 8 +- man/dist_studentized_range.Rd | 2 man/distributional-package.Rd | 1 man/reexports.Rd | 2 man/variance.Rd | 6 +- tests/testthat/test-dist-multivariate-normal.R | 12 ++++ tests/testthat/test-inflated.R | 72 ++++++++++++++++++++++++- 29 files changed, 180 insertions(+), 68 deletions(-)
More information about distributional at CRAN
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