Title: R Repositories Data
Description: Retrieve metadata about packages from repositories to explore
package dependencies, links between help pages, aliases, package
availability on a given date, and other repository-dependent outcome.
In addition, it provides access to information about the processes at CRAN.
This metadata can be used to help package maintainers and users navigate
changes to dependencies and with reproducibility.
Author: Lluis Revilla Sancho [aut, cre, cph]
Maintainer: Lluis Revilla Sancho <lluis.revilla@gmail.com>
This is a re-admission after prior archival of version 0.1.5 dated 2025-09-25
Diff between repo.data versions 0.1.5 dated 2025-09-25 and 0.2.2 dated 2026-06-20
repo.data-0.1.5/repo.data/R/cran_history.R |only repo.data-0.1.5/repo.data/R/sysdata.rda |only repo.data-0.1.5/repo.data/man/alias2df.Rd |only repo.data-0.1.5/repo.data/man/cran_history.Rd |only repo.data-0.1.5/repo.data/man/split_anchor.Rd |only repo.data-0.1.5/repo.data/man/targets2files.Rd |only repo.data-0.1.5/repo.data/tests/test-all.R |only repo.data-0.2.2/repo.data/DESCRIPTION | 20 repo.data-0.2.2/repo.data/MD5 | 178 +++---- repo.data-0.2.2/repo.data/NAMESPACE | 9 repo.data-0.2.2/repo.data/NEWS.md | 6 repo.data-0.2.2/repo.data/R/aaa.R | 9 repo.data-0.2.2/repo.data/R/alias_utils.R | 45 - repo.data-0.2.2/repo.data/R/arch_utils.R | 14 repo.data-0.2.2/repo.data/R/base_alias.R | 4 repo.data-0.2.2/repo.data/R/base_help.R | 51 +- repo.data-0.2.2/repo.data/R/base_xrefs.R | 63 +- repo.data-0.2.2/repo.data/R/bioconductor.R | 19 repo.data-0.2.2/repo.data/R/cran_actions.R | 74 ++ repo.data-0.2.2/repo.data/R/cran_alias.R | 25 repo.data-0.2.2/repo.data/R/cran_archive.R | 73 +- repo.data-0.2.2/repo.data/R/cran_comments.R | 22 repo.data-0.2.2/repo.data/R/cran_doom.R | 3 repo.data-0.2.2/repo.data/R/cran_help.R | 67 +- repo.data-0.2.2/repo.data/R/cran_maintainers.R | 31 - repo.data-0.2.2/repo.data/R/cran_snapshot.R | 20 repo.data-0.2.2/repo.data/R/cran_version.R |only repo.data-0.2.2/repo.data/R/cran_xrefs.R | 160 +----- repo.data-0.2.2/repo.data/R/data.R | 5 repo.data-0.2.2/repo.data/R/dependencies.R | 124 ++-- repo.data-0.2.2/repo.data/R/environment.R |only repo.data-0.2.2/repo.data/R/issues.R |only repo.data-0.2.2/repo.data/R/meta.R |only repo.data-0.2.2/repo.data/R/package_date.R | 22 repo.data-0.2.2/repo.data/R/repo.data-package.R | 1 repo.data-0.2.2/repo.data/R/repos.R | 37 - repo.data-0.2.2/repo.data/R/utils.R | 196 +++---- repo.data-0.2.2/repo.data/R/versions.R | 2 repo.data-0.2.2/repo.data/R/xrefs_utils.R | 254 +++++----- repo.data-0.2.2/repo.data/README.md | 34 - repo.data-0.2.2/repo.data/build/vignette.rds |binary repo.data-0.2.2/repo.data/data/os_alias.rda |binary repo.data-0.2.2/repo.data/inst/WORDLIST | 1 repo.data-0.2.2/repo.data/inst/doc/repo.data.R | 12 repo.data-0.2.2/repo.data/inst/doc/repo.data.Rmd | 22 repo.data-0.2.2/repo.data/inst/doc/repo.data.html | 141 ++--- repo.data-0.2.2/repo.data/inst/scripts/cran_actions.R | 15 repo.data-0.2.2/repo.data/inst/scripts/dependency_evolution.R | 6 repo.data-0.2.2/repo.data/inst/scripts/pkg4.2.rds |only repo.data-0.2.2/repo.data/inst/scripts/pkgstats-CRAN-current.Rds |only repo.data-0.2.2/repo.data/man/alias.Rd |only repo.data-0.2.2/repo.data/man/base_alias.Rd | 5 repo.data-0.2.2/repo.data/man/base_help_cliques.Rd | 6 repo.data-0.2.2/repo.data/man/base_help_pages_not_linked.Rd | 6 repo.data-0.2.2/repo.data/man/base_help_pages_wo_links.Rd | 6 repo.data-0.2.2/repo.data/man/base_links.Rd | 10 repo.data-0.2.2/repo.data/man/base_pages_links.Rd | 8 repo.data-0.2.2/repo.data/man/base_pkges_links.Rd | 8 repo.data-0.2.2/repo.data/man/base_targets_links.Rd | 8 repo.data-0.2.2/repo.data/man/cran_actions.Rd | 28 + repo.data-0.2.2/repo.data/man/cran_alias.Rd | 19 repo.data-0.2.2/repo.data/man/cran_archive.Rd | 14 repo.data-0.2.2/repo.data/man/cran_comments.Rd | 12 repo.data-0.2.2/repo.data/man/cran_date.Rd | 16 repo.data-0.2.2/repo.data/man/cran_doom.Rd | 25 repo.data-0.2.2/repo.data/man/cran_help_cliques.Rd | 21 repo.data-0.2.2/repo.data/man/cran_help_pages_not_linked.Rd | 6 repo.data-0.2.2/repo.data/man/cran_help_pages_wo_links.Rd | 6 repo.data-0.2.2/repo.data/man/cran_issues.Rd |only repo.data-0.2.2/repo.data/man/cran_links.Rd | 21 repo.data-0.2.2/repo.data/man/cran_pages_links.Rd | 11 repo.data-0.2.2/repo.data/man/cran_pkges_links.Rd | 9 repo.data-0.2.2/repo.data/man/cran_snapshot.Rd | 16 repo.data-0.2.2/repo.data/man/cran_targets_links.Rd | 11 repo.data-0.2.2/repo.data/man/cran_version.Rd |only repo.data-0.2.2/repo.data/man/duplicated_alias.Rd | 20 repo.data-0.2.2/repo.data/man/links.Rd |only repo.data-0.2.2/repo.data/man/os_alias.Rd | 16 repo.data-0.2.2/repo.data/man/package_date.Rd | 16 repo.data-0.2.2/repo.data/man/package_date_actions.Rd | 9 repo.data-0.2.2/repo.data/man/package_dependencies.Rd | 7 repo.data-0.2.2/repo.data/man/package_repos.Rd | 18 repo.data-0.2.2/repo.data/man/repo.data-package.Rd | 11 repo.data-0.2.2/repo.data/man/repos_dependencies.Rd | 16 repo.data-0.2.2/repo.data/man/update_dependencies.Rd | 16 repo.data-0.2.2/repo.data/tests/spelling.R | 5 repo.data-0.2.2/repo.data/tests/src |only repo.data-0.2.2/repo.data/tests/test-actions.R |only repo.data-0.2.2/repo.data/tests/test-alias.R |only repo.data-0.2.2/repo.data/tests/test-bioconductor.R |only repo.data-0.2.2/repo.data/tests/test-cran_actions.R |only repo.data-0.2.2/repo.data/tests/test-cran_archive.R |only repo.data-0.2.2/repo.data/tests/test-cran_doom.R | 7 repo.data-0.2.2/repo.data/tests/test-cran_history.R |only repo.data-0.2.2/repo.data/tests/test-cran_issues.R |only repo.data-0.2.2/repo.data/tests/test-cran_targets_links.R |only repo.data-0.2.2/repo.data/tests/test-cran_version.R |only repo.data-0.2.2/repo.data/tests/test-dates.R |only repo.data-0.2.2/repo.data/tests/test-help.R |only repo.data-0.2.2/repo.data/tests/test-links.R |only repo.data-0.2.2/repo.data/tests/test-maintainers.R |only repo.data-0.2.2/repo.data/tests/test-package_date.R | 5 repo.data-0.2.2/repo.data/tests/test-package_repos.R |only repo.data-0.2.2/repo.data/tests/test-update_dependencies.R | 19 repo.data-0.2.2/repo.data/vignettes/repo.data.Rmd | 22 105 files changed, 1211 insertions(+), 1013 deletions(-)
Title: List Things to Do
Description: Manage a 'GitHub' problem using R: wrangle issues, labels and
milestones. It includes functions for storing, prioritizing (sorting),
displaying, adding, deleting, and selecting (filtering) issues based
on qualitative and quantitative information. Issues (labels and
milestones) are written in lists and categorized into the S3 class to
be easily manipulated as datasets in R.
Author: Tanguy Barthelemy [aut, cre, art]
Maintainer: Tanguy Barthelemy <tanguy.barthelemy@insee.fr>
Diff between IssueTrackeR versions 1.3.1 dated 2025-10-27 and 1.4.0 dated 2026-06-20
IssueTrackeR-1.3.1/IssueTrackeR/man/sample.Rd |only IssueTrackeR-1.4.0/IssueTrackeR/DESCRIPTION | 10 IssueTrackeR-1.4.0/IssueTrackeR/LICENSE | 4 IssueTrackeR-1.4.0/IssueTrackeR/MD5 | 113 IssueTrackeR-1.4.0/IssueTrackeR/NAMESPACE | 162 IssueTrackeR-1.4.0/IssueTrackeR/NEWS.md | 239 IssueTrackeR-1.4.0/IssueTrackeR/R/IssueTrackeR-package.R | 39 IssueTrackeR-1.4.0/IssueTrackeR/R/check.R | 32 IssueTrackeR-1.4.0/IssueTrackeR/R/comments.R | 2 IssueTrackeR-1.4.0/IssueTrackeR/R/finding-objects.R | 452 IssueTrackeR-1.4.0/IssueTrackeR/R/format.R | 66 IssueTrackeR-1.4.0/IssueTrackeR/R/options.R |only IssueTrackeR-1.4.0/IssueTrackeR/R/plot.R |only IssueTrackeR-1.4.0/IssueTrackeR/R/print.R | 612 IssueTrackeR-1.4.0/IssueTrackeR/R/summary.R | 290 IssueTrackeR-1.4.0/IssueTrackeR/R/update_database.R | 23 IssueTrackeR-1.4.0/IssueTrackeR/R/utils.R | 18 IssueTrackeR-1.4.0/IssueTrackeR/R/wrangling_dataset_issues.R | 121 IssueTrackeR-1.4.0/IssueTrackeR/R/wrangling_dataset_labels.R | 36 IssueTrackeR-1.4.0/IssueTrackeR/R/wrangling_dataset_milestones.R | 48 IssueTrackeR-1.4.0/IssueTrackeR/R/wrangling_issues.R | 988 IssueTrackeR-1.4.0/IssueTrackeR/R/wrangling_repo.R | 9 IssueTrackeR-1.4.0/IssueTrackeR/R/write.R |only IssueTrackeR-1.4.0/IssueTrackeR/R/zzz.R | 30 IssueTrackeR-1.4.0/IssueTrackeR/README.md | 316 IssueTrackeR-1.4.0/IssueTrackeR/inst/WORDLIST | 58 IssueTrackeR-1.4.0/IssueTrackeR/inst/data_issues/closed_issues.yaml |10668 +++++----- IssueTrackeR-1.4.0/IssueTrackeR/inst/data_issues/generate-files.R | 10 IssueTrackeR-1.4.0/IssueTrackeR/inst/data_issues/list_labels.yaml | 132 IssueTrackeR-1.4.0/IssueTrackeR/inst/data_issues/list_milestones.yaml | 142 IssueTrackeR-1.4.0/IssueTrackeR/inst/data_issues/open_issues.yaml | 8184 ++++--- IssueTrackeR-1.4.0/IssueTrackeR/man/IssueTrackeR-package.Rd | 55 IssueTrackeR-1.4.0/IssueTrackeR/man/append.Rd | 67 IssueTrackeR-1.4.0/IssueTrackeR/man/author_last_comment.Rd | 68 IssueTrackeR-1.4.0/IssueTrackeR/man/format_issues.Rd | 98 IssueTrackeR-1.4.0/IssueTrackeR/man/format_labels.Rd | 75 IssueTrackeR-1.4.0/IssueTrackeR/man/format_milestones.Rd | 77 IssueTrackeR-1.4.0/IssueTrackeR/man/get.Rd | 264 IssueTrackeR-1.4.0/IssueTrackeR/man/get_all_repos.Rd | 70 IssueTrackeR-1.4.0/IssueTrackeR/man/get_nbr_comments.Rd | 68 IssueTrackeR-1.4.0/IssueTrackeR/man/new_issue.Rd | 212 IssueTrackeR-1.4.0/IssueTrackeR/man/new_issues.Rd | 258 IssueTrackeR-1.4.0/IssueTrackeR/man/plot.Rd |only IssueTrackeR-1.4.0/IssueTrackeR/man/print.Rd | 115 IssueTrackeR-1.4.0/IssueTrackeR/man/reset_options.Rd |only IssueTrackeR-1.4.0/IssueTrackeR/man/sample-issues.Rd |only IssueTrackeR-1.4.0/IssueTrackeR/man/summary.Rd | 92 IssueTrackeR-1.4.0/IssueTrackeR/man/unique-issues.Rd |only IssueTrackeR-1.4.0/IssueTrackeR/man/update_database.Rd | 114 IssueTrackeR-1.4.0/IssueTrackeR/man/with_comments.Rd | 66 IssueTrackeR-1.4.0/IssueTrackeR/man/with_labels.Rd | 64 IssueTrackeR-1.4.0/IssueTrackeR/man/with_text.Rd | 84 IssueTrackeR-1.4.0/IssueTrackeR/man/write.Rd | 203 IssueTrackeR-1.4.0/IssueTrackeR/tests/spelling.R | 14 IssueTrackeR-1.4.0/IssueTrackeR/tests/testthat.R | 24 IssueTrackeR-1.4.0/IssueTrackeR/tests/testthat/data |only IssueTrackeR-1.4.0/IssueTrackeR/tests/testthat/helper.R | 64 IssueTrackeR-1.4.0/IssueTrackeR/tests/testthat/test-check.R | 168 IssueTrackeR-1.4.0/IssueTrackeR/tests/testthat/test-extract.R |only IssueTrackeR-1.4.0/IssueTrackeR/tests/testthat/test-format_timestamp.R | 28 IssueTrackeR-1.4.0/IssueTrackeR/tests/testthat/test-get_issues.R | 114 61 files changed, 14107 insertions(+), 11159 deletions(-)
Title: Bayesian Dynamic Borrowing with Flexible Baseline Hazard
Function
Description: Allows Bayesian borrowing from a historical dataset for time-to-
event data. A flexible baseline hazard function is achieved via a piecewise
exponential likelihood with time varying split points and smoothing prior on the
historic baseline hazards. The method is described in Scott and Lewin (2026)
<doi:10.1093/biostatistics/kxag006>, and a paper focused on the software is
in Scott, Axillus, Lewin and Izmirlian (2026) <doi:10.48550/arXiv.2408.04327>.
Author: Darren Scott [aut],
Sophia Axillus [aut],
Grant Izmirlian [aut, cre]
Maintainer: Grant Izmirlian <grant.izmirlian@astrazeneca.com>
Diff between BayesFBHborrow versions 2.0.2 dated 2024-09-16 and 2.0.9 dated 2026-06-20
BayesFBHborrow-2.0.2/BayesFBHborrow/R/GibbsMH.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/RJMCMC.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/beta_updates.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/lambda_updates.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/outputs.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/piecewise_exp_cc-data.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/piecewise_exp_hist-data.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/posterior_updates.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/run_mcmc.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/utils.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/weibull_cc-data.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/R/weibull_hist-data.R |only BayesFBHborrow-2.0.2/BayesFBHborrow/data |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/BayesFBHborrow.NoBorrow.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/BayesFBHborrow.WBorrow.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/GibbsMH.NoBorrow.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/GibbsMH.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/GibbsMH.WBorrow.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-ICAR_calc.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-J_RJMCMC.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-J_RJMCMC_NoBorrow.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-beta.MH.RW.glm.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-beta_MH_MALA.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-beta_MH_NR.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-beta_MH_RW.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-beta_mom.NR.fun.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-beta_mom.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-birth_move.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-dataframe_fun.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-death_move.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-glmFit.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-input_check.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-lambda_0_MH_cp.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-lambda_0_MH_cp_NoBorrow.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-lambda_MH_cp.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-lambda_conj_prop.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-lgamma_ratio.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-llikelihood_ratio_beta.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-llikelihood_ratio_lambda.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-log_likelihood.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-logsumexp.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-lprop.dens.beta.NR.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-lprop_density_beta.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-ltau_dprior.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-mu_update.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-normalize_prob.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-nu_sigma_update.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-plot_hist.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-plot_matrix.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-plot_trace.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-predictive_hazard.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-predictive_hazard_ratio.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-predictive_survival.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-set_hyperparameters.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-set_tuning_parameters.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-shuffle_split_point_location.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-shuffle_split_point_location_NoBorrow.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-sigma2_update.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-smooth_hazard.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-smooth_survival.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/dot-tau_update.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/piecewise_exp_cc.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/piecewise_exp_hist.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/weibull_cc.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/man/weibull_hist.Rd |only BayesFBHborrow-2.0.2/BayesFBHborrow/tests |only BayesFBHborrow-2.0.9/BayesFBHborrow/DESCRIPTION | 31 BayesFBHborrow-2.0.9/BayesFBHborrow/MD5 | 103 -- BayesFBHborrow-2.0.9/BayesFBHborrow/NAMESPACE | 49 - BayesFBHborrow-2.0.9/BayesFBHborrow/R/BayesFBHborrow.R |only BayesFBHborrow-2.0.9/BayesFBHborrow/README.md |only BayesFBHborrow-2.0.9/BayesFBHborrow/inst |only BayesFBHborrow-2.0.9/BayesFBHborrow/man/BayesFBHborrow.Rd | 371 +++++++--- BayesFBHborrow-2.0.9/BayesFBHborrow/man/Combine.Rd |only BayesFBHborrow-2.0.9/BayesFBHborrow/man/coef.BayesFBHborrow.Rd | 79 +- BayesFBHborrow-2.0.9/BayesFBHborrow/man/genBFBHBdat.Rd |only BayesFBHborrow-2.0.9/BayesFBHborrow/man/group_summary.Rd | 71 + BayesFBHborrow-2.0.9/BayesFBHborrow/man/init_lambda_hyperparameters.Rd | 72 + BayesFBHborrow-2.0.9/BayesFBHborrow/man/plot.BayesFBHborrow.Rd | 94 +- BayesFBHborrow-2.0.9/BayesFBHborrow/man/read_haz_mcmc_smpls.Rd |only BayesFBHborrow-2.0.9/BayesFBHborrow/man/reexports.Rd |only BayesFBHborrow-2.0.9/BayesFBHborrow/man/summary.BayesFBHborrow.Rd | 83 +- BayesFBHborrow-2.0.9/BayesFBHborrow/man/update.BayesFBHborrow.Rd |only BayesFBHborrow-2.0.9/BayesFBHborrow/man/xifinder.Rd |only 84 files changed, 616 insertions(+), 337 deletions(-)
More information about BayesFBHborrow at CRAN
Permanent link
Title: TraMineR Extension
Description: Collection of ancillary functions and utilities to be used in conjunction with the 'TraMineR' package for sequence data exploration. Includes, among others, specific functions such as state survival plots, position-wise group-typical states, dynamic sequence indicators, and dissimilarities between event sequences. Also includes contributions by non-members of the TraMineR team such as methods for polyadic data and for the comparison of groups of sequences.
Author: Gilbert Ritschard [aut, cre, ths, cph] ,
Matthias Studer [aut] ,
Reto Buergin [aut] ,
Tim F. Liao [ctb] ,
Alexis Gabadinho [ctb],
Pierre-Alexandre Fonta [ctb],
Nicolas S. Muller [ctb],
Patrick Rousset [ctb]
Maintainer: Gilbert Ritschard <gilbert.ritschard@unige.ch>
Diff between TraMineRextras versions 0.6.8 dated 2024-08-17 and 0.6.9 dated 2026-06-20
DESCRIPTION | 20 ++++++------ MD5 | 24 +++++++-------- NAMESPACE | 5 ++- R/dissCompare.R | 58 ++++++++++++++++++++++++++---------- R/seqCompare.R | 67 +++++++++++++++++++++++++++++------------- R/seqpolyads.R | 17 ++++++++++ build/partial.rdb |binary inst/NEWS | 20 +++++++++++- inst/NEWS.Rd | 19 +++++++++++ man/TraMineRextras-package.Rd | 2 - man/dissCompare.Rd | 39 ++++++++++++++++++------ man/seqemlt.Rd | 5 ++- man/seqpolyads.Rd | 2 - 13 files changed, 205 insertions(+), 73 deletions(-)
More information about TraMineRextras at CRAN
Permanent link
Title: MR Spectroscopy Analysis Tools
Description: Tools for reading, visualising and processing Magnetic Resonance
Spectroscopy data. The package includes methods for spectral fitting: Wilson
(2021) <DOI:10.1002/mrm.28385>, Wilson (2025) <DOI:10.1002/mrm.30462> and
spectral alignment: Wilson (2018) <DOI:10.1002/mrm.27605>.
Author: Martin Wilson [cre, aut] ,
Yong Wang [ctb],
John Muschelli [ctb]
Maintainer: Martin Wilson <martin.wilson111@gmail.com>
Diff between spant versions 4.1.0 dated 2026-05-21 and 4.2.0 dated 2026-06-20
DESCRIPTION | 8 - MD5 | 56 ++++----- NAMESPACE | 2 NEWS.md | 5 R/abfit.R | 182 ++++++++++++++++++++++++++---- R/basis_set.R | 26 ++++ R/fit_display.R | 12 + R/fit_svs.R | 51 ++++++-- R/fit_svs_edited.R | 26 +++- R/mrs_data_io.R | 5 R/mrs_data_proc.R | 78 ++++++++++-- R/mrs_read_nifti.R | 6 inst/doc/abfit-baseline-opts.html | 12 - inst/doc/spant-basis-simulation.html | 8 - inst/doc/spant-intro.html | 142 +++++++++++------------ inst/doc/spant-metabolite-simulation.html | 10 - inst/doc/spant-preprocessing.html | 14 +- man/abfit_opts.Rd | 14 ++ man/abfit_reg_opts.Rd | 17 ++ man/bc_poly.Rd | 5 man/comb_coils_mrsi_gls.Rd | 11 + man/comb_coils_svs_gls.Rd | 18 ++ man/fit_svs.Rd | 14 +- man/fit_svs_edited.Rd | 4 man/plot_tqn_fit_csv.Rd |only man/rm_basis_elements.Rd |only tests/testthat/abfit_res_coarse.rds |binary tests/testthat/abfit_res_default.rds |binary tests/testthat/abfit_res_fine.rds |binary tests/testthat/abfit_res_no_optim.rds |binary 30 files changed, 538 insertions(+), 188 deletions(-)
Title: Pricing Equity Derivatives with Extensions of Black-Scholes
Description: Algorithms to price American and European equity options,
convertible bonds and a variety of other financial derivatives. It
uses an extension of the usual Black-Scholes model in which jump to
default may occur at a probability specified by a power-law link
between stock price and hazard rate as found in the paper by
Takahashi, Kobayashi, and Nakagawa (2001)
<doi:10.3905/jfi.2001.319302>. We use ideas and techniques from
Andersen and Buffum (2002) <doi:10.2139/ssrn.355308> and Linetsky
(2006) <doi:10.1111/j.1467-9965.2006.00271.x>.
Author: Brian K. Boonstra [aut, cre]
Maintainer: Brian K. Boonstra <ragtop@boonstra.org>
Diff between ragtop versions 1.2.1 dated 2026-06-15 and 1.3.1 dated 2026-06-20
DESCRIPTION | 17 +++--- MD5 | 35 +++++++------- NAMESPACE | 2 NEWS.md | 6 ++ R/implicit.R | 8 --- R/matrix.R |only inst/doc/ragtop_convertibles_in_r.R | 12 +++- inst/doc/ragtop_convertibles_in_r.Rmd | 12 +++- inst/doc/ragtop_convertibles_in_r.html | 76 ++++++++++++++++--------------- man/construct_implicit_grid_structure.Rd | 1 man/find_present_value.Rd | 1 man/form_present_value_grid.Rd | 1 man/infer_conforming_time_grid.Rd | 1 man/integrate_pde.Rd | 1 man/iterate_grid_from_timestep.Rd | 1 man/pde_matrix_solve.Rd |only man/take_implicit_timestep.Rd | 1 man/timestep_instruments.Rd | 1 tests/testthat/test_matrix.R |only vignettes/ragtop_convertibles_in_r.Rmd | 12 +++- 20 files changed, 107 insertions(+), 81 deletions(-)
Title: Maximum Likelihood Estimation of Various Univariate and
Multivariate Distributions
Description: Several functions for maximum likelihood estimation of various univariate and multivariate distributions. The list includes more than 100 functions for univariate continuous and discrete distributions, distributions that lie on the real line, the positive line, interval restricted, circular distributions. Further, multivariate continuous and discrete distributions, distributions for compositional and directional data, etc. Some references include Johnson N. L., Kotz S. and Balakrishnan N. (1994). "Continuous Univariate Distributions, Volume 1" <ISBN:978-0-471-58495-7>, Johnson, Norman L. Kemp, Adrianne W. Kotz, Samuel (2005). "Univariate Discrete Distributions". <ISBN:978-0-471-71580-1> and Mardia, K. V. and Jupp, P. E. (2000). "Directional Statistics". <ISBN:978-0-471-95333-3>.
Author: Michail Tsagris [aut, cre],
Sofia Piperaki [aut],
Muhammad Imran [ctb],
Rafail Vargiakakis [aut],
Nikolaos Kontemeniotis [aut]
Maintainer: Michail Tsagris <mtsagris@uoc.gr>
Diff between MLE versions 1.7 dated 2026-03-27 and 1.8 dated 2026-06-20
DESCRIPTION | 10 +++--- MD5 | 8 ++--- NAMESPACE | 1 R/hspher.mle.R | 2 + man/hspher.mle.Rd | 81 ++++++++++++++++++++++++++++++++++++++++++++++-------- 5 files changed, 82 insertions(+), 20 deletions(-)
Title: A Toolkit for Using Whole Building Simulation Program
'EnergyPlus'
Description: A rich toolkit of using the whole building
simulation program 'EnergyPlus'(<https://energyplus.net>), which
enables programmatic navigation, modification of 'EnergyPlus' models
and makes it less painful to do parametric simulations and analysis.
Author: Hongyuan Jia [aut, cre, cph] ,
Adrian Chong [aut]
Maintainer: Hongyuan Jia <hongyuanjia@cqust.edu.cn>
Diff between eplusr versions 0.16.3 dated 2025-04-22 and 0.17.0 dated 2026-06-20
DESCRIPTION | 32 LICENSE | 4 MD5 | 143 NAMESPACE | 4 NEWS.md | 62 R/assert.R | 374 - R/constants.R | 520 + R/epw.R | 4449 +++++++-------- R/format.R | 2434 ++++---- R/geom.R | 1480 ++--- R/group.R | 3403 +++++------ R/idd.R | 49 R/iddobj.R | 3960 ++++++------- R/idf.R | 8010 +++++++++++++-------------- R/idfobj.R | 14 R/impl-epw.R | 5 R/impl-geom.R | 3664 ++++++------ R/impl-idd.R | 16 R/impl-idf.R | 298 - R/impl-idfobj.R | 512 - R/impl-viewer.R | 1939 +++--- R/impl.R | 5 R/install.R | 346 - R/job-json.R |only R/job-store.R |only R/job.R | 2867 ++++----- R/options.R | 2 R/param.R | 2147 ++++--- R/parse.R | 6 R/reload.R | 244 R/run.R | 9 R/standalone-schema.R |only R/sysdata.rda |binary R/transition.R |10934 ++++++++++++++++++++------------------ R/units.R | 416 - R/validate.R | 1532 ++--- R/zzz.R | 8 README.md | 12 man/EplusGroupJob.Rd | 2806 ++++----- man/EplusJob.Rd | 2814 ++++----- man/Epw.Rd | 4109 +++++++------- man/Idd.Rd | 2531 ++++---- man/Idf.Rd | 8748 +++++++++++++++--------------- man/IdfGeometry.Rd | 1270 ++-- man/IdfObject.Rd | 4382 +++++++-------- man/ParametricJob.Rd | 1849 +++--- man/energyplus.Rd | 492 - man/get_idf_table.Rd | 3 man/install_eplus.Rd | 2 man/parse_dots_value.Rd | 6 man/read_idf.Rd | 154 man/read_idfeditor_copy.Rd | 70 man/run_model.Rd | 380 - man/save_job.Rd |only man/use_eplus.Rd | 168 man/use_idd.Rd | 234 tests/testthat/test-epw.R | 1078 +-- tests/testthat/test-group.R | 452 - tests/testthat/test-idd.R | 592 +- tests/testthat/test-iddobj.R | 628 +- tests/testthat/test-idf.R | 65 tests/testthat/test-idfobj.R | 1343 ++-- tests/testthat/test-impl-idd.R | 6 tests/testthat/test-impl-idf.R | 5395 +++++++++--------- tests/testthat/test-impl-idfobj.R | 445 - tests/testthat/test-impl.R | 266 tests/testthat/test-install.R | 272 tests/testthat/test-job-json.R |only tests/testthat/test-param.R | 535 + tests/testthat/test-parse.R | 1174 ++-- tests/testthat/test-reload.R | 190 tests/testthat/test-sql.R | 362 - tests/testthat/test-transition.R | 480 + tests/testthat/test-units.R | 64 tests/testthat/test-validate.R | 526 - 75 files changed, 48430 insertions(+), 45361 deletions(-)
More information about survSampleSize at CRAN
Permanent link
Title: Distributed Trimmed Scores Regression for Handling Missing Data
Description: Provides functions for handling missing data using Distributed Trimmed Scores Regression and other imputation methods. It includes facilities for data imputation, evaluation metrics, and clustering analysis. It is designed to work in distributed computing environments to handle large datasets efficiently. The philosophy of the package is described in Guo G. (2024) <doi:10.1080/03610918.2022.2091779>.
Author: Guangbao Guo [aut, cre, cph] ,
Ruiling Niu [aut]
Maintainer: Guangbao Guo <ggb11111111@163.com>
This is a re-admission after prior archival of version 0.2.0 dated 2025-04-27
Diff between DTSR versions 0.2.0 dated 2025-04-27 and 0.2.2 dated 2026-06-20
DTSR-0.2.0/DTSR/man/mean.Rd |only DTSR-0.2.2/DTSR/DESCRIPTION | 15 + DTSR-0.2.2/DTSR/MD5 | 24 +-- DTSR-0.2.2/DTSR/NAMESPACE | 51 +++--- DTSR-0.2.2/DTSR/R/DRPCA.R | 29 ++- DTSR-0.2.2/DTSR/R/KNN.R | 81 +++------- DTSR-0.2.2/DTSR/R/MLPCA.R | 301 ++++++++++++++++---------------------- DTSR-0.2.2/DTSR/R/NIPALS.R | 277 +++++++++++++++------------------- DTSR-0.2.2/DTSR/R/RPCA.R | 169 ++++++++------------- DTSR-0.2.2/DTSR/R/SVD.R | 62 +++---- DTSR-0.2.2/DTSR/R/mean.R | 72 ++------- DTSR-0.2.2/DTSR/man/DRPCA.Rd | 13 + DTSR-0.2.2/DTSR/man/KNN.Rd | 2 DTSR-0.2.2/DTSR/man/meanImpute.Rd |only 14 files changed, 476 insertions(+), 620 deletions(-)
More information about CamelRatiosIndex at CRAN
Permanent link
Title: Descriptive Statistics, Transition Plots, and More
Description: Utilities for common medical-statistics graphics
and tables, including automatic creation of publication-ready "Table 1"
summaries; transition (Sankey) plots; flow-chart helpers that extend the
grid package; Bézier lines and arrows; and a singular-value-decomposition-
based variable-selection method.
Author: Max Gordon [aut, cre]
Maintainer: Max Gordon <max@gforge.se>
Diff between Gmisc versions 3.3.0 dated 2026-06-02 and 3.4.0 dated 2026-06-20
Gmisc-3.3.0/Gmisc/tests/testthat/test-fig_caption.R |only Gmisc-3.4.0/Gmisc/DESCRIPTION | 8 Gmisc-3.4.0/Gmisc/MD5 | 130 Gmisc-3.4.0/Gmisc/NAMESPACE | 8 Gmisc-3.4.0/Gmisc/NEWS.md | 26 Gmisc-3.4.0/Gmisc/R/boxGrobs_align.R | 108 Gmisc-3.4.0/Gmisc/R/boxGrobs_align_pr_helpers.R | 100 Gmisc-3.4.0/Gmisc/R/boxGrobs_boxGrob.R | 38 Gmisc-3.4.0/Gmisc/R/boxGrobs_boxShapes.R | 25 Gmisc-3.4.0/Gmisc/R/boxGrobs_connect.R | 77 Gmisc-3.4.0/Gmisc/R/boxGrobs_connect_pr_helpers.R | 62 Gmisc-3.4.0/Gmisc/R/boxGrobs_connect_pr_many_to_one_fan_in_on_top_boxes.R | 2 Gmisc-3.4.0/Gmisc/R/boxGrobs_connect_pr_single_boxes.R | 50 Gmisc-3.4.0/Gmisc/R/boxGrobs_connect_strategies.R | 5 Gmisc-3.4.0/Gmisc/R/boxGrobs_coords.R | 16 Gmisc-3.4.0/Gmisc/R/boxGrobs_equalizeWidths.R | 153 Gmisc-3.4.0/Gmisc/R/boxGrobs_move.R | 22 Gmisc-3.4.0/Gmisc/R/boxGrobs_position.R |only Gmisc-3.4.0/Gmisc/R/boxGrobs_prCreateBoxCoordinates.R | 38 Gmisc-3.4.0/Gmisc/R/boxGrobs_print.Gmisc_list_of_boxes.R | 20 Gmisc-3.4.0/Gmisc/R/boxGrobs_s3_append.R | 40 Gmisc-3.4.0/Gmisc/R/boxGrobs_s3_connect.R | 308 + Gmisc-3.4.0/Gmisc/R/boxGrobs_s3_phaseLabel.R |only Gmisc-3.4.0/Gmisc/R/boxGrobs_s3_spread.R | 2 Gmisc-3.4.0/Gmisc/R/boxGrobs_spread.R | 122 Gmisc-3.4.0/Gmisc/R/boxGrobs_subelement_select.R |only Gmisc-3.4.0/Gmisc/README.md | 180 Gmisc-3.4.0/Gmisc/inst/doc/Descriptives.html | 4 Gmisc-3.4.0/Gmisc/inst/doc/Grid-based_flowcharts.R | 265 + Gmisc-3.4.0/Gmisc/inst/doc/Grid-based_flowcharts.Rmd | 324 + Gmisc-3.4.0/Gmisc/inst/doc/Grid-based_flowcharts.html | 1948 +++++----- Gmisc-3.4.0/Gmisc/inst/doc/Transition-class.html | 4 Gmisc-3.4.0/Gmisc/inst/doc/transitionPlot.html | 4 Gmisc-3.4.0/Gmisc/inst/examples/alignBox_ex.R | 29 Gmisc-3.4.0/Gmisc/inst/examples/connectGrob_example.R | 93 Gmisc-3.4.0/Gmisc/inst/examples/spreadBox_ex.R | 14 Gmisc-3.4.0/Gmisc/man/align.Rd | 59 Gmisc-3.4.0/Gmisc/man/append.Rd | 3 Gmisc-3.4.0/Gmisc/man/box.Rd | 11 Gmisc-3.4.0/Gmisc/man/boxHeaderGrob.Rd | 3 Gmisc-3.4.0/Gmisc/man/boxPropGrob.Rd | 3 Gmisc-3.4.0/Gmisc/man/boxShapes.Rd | 3 Gmisc-3.4.0/Gmisc/man/connect.Rd | 165 Gmisc-3.4.0/Gmisc/man/coords.Rd | 17 Gmisc-3.4.0/Gmisc/man/distance.Rd | 3 Gmisc-3.4.0/Gmisc/man/equalizeHeights.Rd |only Gmisc-3.4.0/Gmisc/man/equalizeWidths.Rd | 13 Gmisc-3.4.0/Gmisc/man/figures |only Gmisc-3.4.0/Gmisc/man/flowchart.Rd | 3 Gmisc-3.4.0/Gmisc/man/insert.Rd | 16 Gmisc-3.4.0/Gmisc/man/move.Rd | 3 Gmisc-3.4.0/Gmisc/man/moveBox.Rd | 17 Gmisc-3.4.0/Gmisc/man/phaseLabel.Rd |only Gmisc-3.4.0/Gmisc/man/position.Rd |only Gmisc-3.4.0/Gmisc/man/prCreateBoxCoordinates.Rd | 11 Gmisc-3.4.0/Gmisc/man/prGetBoxAxisDefaults.Rd | 3 Gmisc-3.4.0/Gmisc/man/print.Gmisc_list_of_boxes.Rd | 6 Gmisc-3.4.0/Gmisc/man/spread.Rd | 46 Gmisc-3.4.0/Gmisc/tests/testthat/_snaps |only Gmisc-3.4.0/Gmisc/tests/testthat/test-align-pipeline.R | 78 Gmisc-3.4.0/Gmisc/tests/testthat/test-boxGrob-corner-radius.R |only Gmisc-3.4.0/Gmisc/tests/testthat/test-boxGrob_move.R | 18 Gmisc-3.4.0/Gmisc/tests/testthat/test-boxGrob_spread.R | 106 Gmisc-3.4.0/Gmisc/tests/testthat/test-boxShapes.R | 43 Gmisc-3.4.0/Gmisc/tests/testthat/test-connectGrob-axis-connectors.R |only Gmisc-3.4.0/Gmisc/tests/testthat/test-connectGrob-spread-assignment.R |only Gmisc-3.4.0/Gmisc/tests/testthat/test-connectGrob_fan_in_top.R | 21 Gmisc-3.4.0/Gmisc/tests/testthat/test-equalizeHeights.R |only Gmisc-3.4.0/Gmisc/tests/testthat/test-flowchart-issue76-connectors.R |only Gmisc-3.4.0/Gmisc/tests/testthat/test-s3-api-design.R | 185 Gmisc-3.4.0/Gmisc/tests/testthat/test-subelement-regex.R |only Gmisc-3.4.0/Gmisc/vignettes/Grid-based_flowcharts.Rmd | 324 + 72 files changed, 4109 insertions(+), 1276 deletions(-)
Title: A Common API to Clustering
Description: A common interface to specifying clustering models, in the
same style as 'parsnip'. Creates unified interface across different
functions and computational engines.
Author: Emil Hvitfeldt [aut, cre] ,
Kelly Bodwin [aut],
Posit Software, PBC [cph, fnd]
Maintainer: Emil Hvitfeldt <emil.hvitfeldt@posit.co>
Diff between tidyclust versions 0.3.0 dated 2026-05-21 and 0.3.1 dated 2026-06-20
DESCRIPTION | 8 +-- MD5 | 68 +++++++++++++-------------- NEWS.md | 8 +++ R/hier_clust.R | 30 +++++------ R/metric-aaa.R | 53 +++++++++++++++++++-- man/cluster_metric_set.Rd | 10 ++- man/details_db_clust_dbscan.Rd | 6 +- man/details_db_clust_hdbscan.Rd | 2 man/details_gm_clust_mclust.Rd | 7 +- man/details_mean_shift_LPCM.Rd | 5 - man/details_mean_shift_meanShiftR.Rd | 5 - man/finalize_model_tidyclust.Rd | 2 man/fit.Rd | 2 man/hier_clust.Rd | 18 ++++++- man/linkage_method.Rd | 5 - man/new_cluster_metric.Rd | 32 +++++++++++- man/reexports.Rd | 10 +-- man/rmd/db_clust_dbscan.Rmd | 4 - man/rmd/db_clust_dbscan.md | 4 - man/rmd/db_clust_hdbscan.Rmd | 2 man/rmd/db_clust_hdbscan.md | 2 man/rmd/gm_clust_mclust.Rmd | 4 - man/rmd/gm_clust_mclust.md | 4 - man/rmd/mean_shift_LPCM.Rmd | 4 - man/rmd/mean_shift_LPCM.md | 4 - man/rmd/mean_shift_meanShiftR.Rmd | 4 - man/rmd/mean_shift_meanShiftR.md | 4 - man/silhouette_avg.Rd | 10 +-- man/sse_ratio.Rd | 8 +-- man/sse_total.Rd | 8 +-- man/sse_within_total.Rd | 8 +-- man/tidyclust-package.Rd | 1 man/tidyclust_update.Rd | 2 man/tune_cluster.Rd | 4 - tests/testthat/test-cluster_metric_set.R | 78 +++++++++++++++++++++++++++++++ 35 files changed, 297 insertions(+), 129 deletions(-)
Title: High-Performance Phenotypic Data Pipelines for Breeding
Description: A streamlined toolkit specifically designed for genomic
selection and quantitative genetics in animal breeding. It provides
high-performance data manipulation backed by 'data.table', focusing on
multi-breed and multi-trait nested grouping operations. Features
include zero-copy data importing, automated cross-validation
splitting, and robust tools to generate and batch-export formatted
phenotypic files required by various breeding software (e.g.,
'ASReml-R', 'HIBLUP', 'DMU'), heavily optimizing iterative variance
component analysis and large-scale evaluation pipelines.
Author: Guo Meng [aut, cre],
Guo Meng [cph]
Maintainer: Guo Meng <tony2015116@163.com>
Diff between mintyr versions 0.1.2 dated 2025-10-25 and 0.1.3 dated 2026-06-20
mintyr-0.1.2/mintyr/R/convert_nest.R |only mintyr-0.1.2/mintyr/R/get_filename.R |only mintyr-0.1.2/mintyr/R/get_path_segment.R |only mintyr-0.1.2/mintyr/man/convert_nest.Rd |only mintyr-0.1.2/mintyr/man/get_filename.Rd |only mintyr-0.1.2/mintyr/man/get_path_segment.Rd |only mintyr-0.1.2/mintyr/tests |only mintyr-0.1.3/mintyr/DESCRIPTION | 27 mintyr-0.1.3/mintyr/LICENSE | 2 mintyr-0.1.3/mintyr/MD5 | 96 - mintyr-0.1.3/mintyr/NAMESPACE | 39 mintyr-0.1.3/mintyr/NEWS.md | 7 mintyr-0.1.3/mintyr/R/c2p_nest.R | 351 +++-- mintyr-0.1.3/mintyr/R/export_list.R | 230 ++- mintyr-0.1.3/mintyr/R/export_nest.R | 462 +++---- mintyr-0.1.3/mintyr/R/export_xlsx.R |only mintyr-0.1.3/mintyr/R/format_digits.R | 219 ++- mintyr-0.1.3/mintyr/R/get_path_info.R |only mintyr-0.1.3/mintyr/R/import_csv.R | 245 ++- mintyr-0.1.3/mintyr/R/import_xlsx.R | 409 ++++-- mintyr-0.1.3/mintyr/R/nest_cv.R | 284 ++-- mintyr-0.1.3/mintyr/R/r2p_nest.R | 203 +-- mintyr-0.1.3/mintyr/R/split_cv.R | 263 ++-- mintyr-0.1.3/mintyr/R/top_perc.R | 294 ++-- mintyr-0.1.3/mintyr/R/w2l_nest.R | 285 ++-- mintyr-0.1.3/mintyr/R/w2l_split.R | 299 ++-- mintyr-0.1.3/mintyr/R/zzz.R | 22 mintyr-0.1.3/mintyr/README.md | 42 mintyr-0.1.3/mintyr/inst/doc/get-started.R | 439 ++---- mintyr-0.1.3/mintyr/inst/doc/get-started.Rmd | 544 +++----- mintyr-0.1.3/mintyr/inst/doc/get-started.html | 1675 ++++++++++++-------------- mintyr-0.1.3/mintyr/man/c2p_nest.Rd | 158 +- mintyr-0.1.3/mintyr/man/export_list.Rd | 69 - mintyr-0.1.3/mintyr/man/export_nest.Rd | 150 -- mintyr-0.1.3/mintyr/man/export_xlsx.Rd |only mintyr-0.1.3/mintyr/man/format_digits.Rd | 71 - mintyr-0.1.3/mintyr/man/get_path_info.Rd |only mintyr-0.1.3/mintyr/man/import_csv.Rd | 108 - mintyr-0.1.3/mintyr/man/import_xlsx.Rd | 141 +- mintyr-0.1.3/mintyr/man/nest_cv.Rd | 88 - mintyr-0.1.3/mintyr/man/r2p_nest.Rd | 87 - mintyr-0.1.3/mintyr/man/split_cv.Rd | 95 - mintyr-0.1.3/mintyr/man/top_perc.Rd | 91 - mintyr-0.1.3/mintyr/man/w2l_nest.Rd | 99 - mintyr-0.1.3/mintyr/man/w2l_split.Rd | 114 - mintyr-0.1.3/mintyr/vignettes/get-started.Rmd | 544 +++----- 46 files changed, 4176 insertions(+), 4076 deletions(-)
Title: Parsing Glycan Structure Text Representations
Description: Provides functions to parse glycan structure text representations
into 'glyrepr' glycan structures. Currently, it supports StrucGP-style,
pGlyco-style, IUPAC-condensed, IUPAC-extended, IUPAC-short, WURCS,
Linear Code, and GlycoCT format. It also provides an automatic parser
to detect the format and parse the structure string.
Author: Bin Fu [aut, cre, cph]
Maintainer: Bin Fu <23110220018@m.fudan.edu.cn>
Diff between glyparse versions 0.6.0 dated 2026-04-29 and 0.6.1 dated 2026-06-20
DESCRIPTION | 8 MD5 | 24 - NEWS.md | 8 R/parse-glycoct.R | 108 ++++++- R/parse-wurcs.R | 201 +++++++++++++- R/struc-parser-wrapper.R | 24 + README.md | 8 build/partial.rdb |binary build/vignette.rds |binary inst/doc/glyparse.html | 380 +++++++++++++++------------ tests/testthat/test-na-support.R | 41 +- tests/testthat/test-parse-glycoct.R | 41 ++ tests/testthat/test-parse-wurcs.R | 504 ++++++++++++++++++++++++++++++++++++ 13 files changed, 1109 insertions(+), 238 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-07-06 0.3.2
2025-01-08 0.3.1
2024-05-16 0.3.0
2024-01-19 0.2.0
2023-07-13 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-08-27 2.0
2019-08-01 1.7
Title: R Interface to Apache Spark
Description: R interface to Apache Spark, a fast and general
engine for big data processing, see <https://spark.apache.org/>. This
package supports connecting to local and remote Apache Spark clusters,
provides a 'dplyr' compatible back-end, and provides an interface to
Spark's built-in machine learning algorithms.
Author: Javier Luraschi [aut],
Kevin Kuo [aut] ,
Kevin Ushey [aut],
JJ Allaire [aut],
Samuel Macedo [ctb],
Hossein Falaki [aut],
Lu Wang [aut],
Andy Zhang [aut],
Yitao Li [aut] ,
Jozef Hajnala [ctb],
Maciej Szymkiewicz [ctb] ,
Wil Davis [ctb],
Edgar Ruiz [au [...truncated...]
Maintainer: Edgar Ruiz <edgar@rstudio.com>
Diff between sparklyr versions 1.9.4 dated 2026-04-18 and 1.9.5 dated 2026-06-20
sparklyr-1.9.4/sparklyr/tools/readme/databricks-connect.png |only sparklyr-1.9.4/sparklyr/tools/readme/ggplot2-1.png |only sparklyr-1.9.4/sparklyr/tools/readme/spark-connect-livy.png |only sparklyr-1.9.4/sparklyr/tools/readme/spark-connect.png |only sparklyr-1.9.4/sparklyr/tools/readme/spark-dataview.png |only sparklyr-1.9.4/sparklyr/tools/readme/sparklyr-diagram.png |only sparklyr-1.9.5/sparklyr/DESCRIPTION | 8 sparklyr-1.9.5/sparklyr/MD5 | 658 ++-- sparklyr-1.9.5/sparklyr/NAMESPACE | 1 sparklyr-1.9.5/sparklyr/NEWS.md | 13 sparklyr-1.9.5/sparklyr/R/arrow_data.R | 79 sparklyr-1.9.5/sparklyr/R/avro_utils.R | 20 sparklyr-1.9.5/sparklyr/R/config_spark.R | 106 sparklyr-1.9.5/sparklyr/R/connection_instances.R | 18 sparklyr-1.9.5/sparklyr/R/connection_progress.R | 21 sparklyr-1.9.5/sparklyr/R/connection_shinyapp.R | 6 sparklyr-1.9.5/sparklyr/R/connection_spark.R | 165 - sparklyr-1.9.5/sparklyr/R/core_config.R | 25 sparklyr-1.9.5/sparklyr/R/core_deserialize.R | 74 sparklyr-1.9.5/sparklyr/R/core_gateway.R | 73 sparklyr-1.9.5/sparklyr/R/core_invoke.R | 137 - sparklyr-1.9.5/sparklyr/R/core_jobj.R | 23 sparklyr-1.9.5/sparklyr/R/core_serialize.R | 21 sparklyr-1.9.5/sparklyr/R/core_utils.R | 7 sparklyr-1.9.5/sparklyr/R/data_copy.R | 79 sparklyr-1.9.5/sparklyr/R/data_csv.R | 43 sparklyr-1.9.5/sparklyr/R/data_interface.R | 1324 +++++----- sparklyr-1.9.5/sparklyr/R/databricks_connection.R | 3 sparklyr-1.9.5/sparklyr/R/dbi_spark_connection.R | 91 sparklyr-1.9.5/sparklyr/R/dbi_spark_result.R | 93 sparklyr-1.9.5/sparklyr/R/dbi_spark_table.R | 59 sparklyr-1.9.5/sparklyr/R/do_spark.R | 42 sparklyr-1.9.5/sparklyr/R/dplyr_do.R | 3 sparklyr-1.9.5/sparklyr/R/dplyr_hof.R | 189 - sparklyr-1.9.5/sparklyr/R/dplyr_join.R | 33 sparklyr-1.9.5/sparklyr/R/dplyr_spark.R | 101 sparklyr-1.9.5/sparklyr/R/dplyr_spark_data.R | 30 sparklyr-1.9.5/sparklyr/R/dplyr_spark_table.R | 32 sparklyr-1.9.5/sparklyr/R/dplyr_sql.R | 74 sparklyr-1.9.5/sparklyr/R/dplyr_sql_translation.R | 81 sparklyr-1.9.5/sparklyr/R/install_spark.R | 200 + sparklyr-1.9.5/sparklyr/R/install_spark_versions.R | 103 sparklyr-1.9.5/sparklyr/R/install_spark_windows.R | 59 sparklyr-1.9.5/sparklyr/R/java.R | 30 sparklyr-1.9.5/sparklyr/R/jobs_api.R | 11 sparklyr-1.9.5/sparklyr/R/kubernetes_config.R | 116 sparklyr-1.9.5/sparklyr/R/livy_connection.R | 445 ++- sparklyr-1.9.5/sparklyr/R/livy_install.R | 53 sparklyr-1.9.5/sparklyr/R/livy_invoke.R | 15 sparklyr-1.9.5/sparklyr/R/livy_service.R | 24 sparklyr-1.9.5/sparklyr/R/ml_classification_decision_tree_classifier.R | 137 - sparklyr-1.9.5/sparklyr/R/ml_classification_gbt_classifier.R | 252 + sparklyr-1.9.5/sparklyr/R/ml_classification_linear_svc.R | 155 - sparklyr-1.9.5/sparklyr/R/ml_classification_logistic_regression.R | 253 + sparklyr-1.9.5/sparklyr/R/ml_classification_multilayer_perceptron_classifier.R | 182 - sparklyr-1.9.5/sparklyr/R/ml_classification_naive_bayes.R | 105 sparklyr-1.9.5/sparklyr/R/ml_classification_one_vs_rest.R | 68 sparklyr-1.9.5/sparklyr/R/ml_classification_random_forest_classifier.R | 204 + sparklyr-1.9.5/sparklyr/R/ml_clustering_bisecting_kmeans.R | 85 sparklyr-1.9.5/sparklyr/R/ml_clustering_gaussian_mixture.R | 81 sparklyr-1.9.5/sparklyr/R/ml_clustering_kmeans.R | 118 sparklyr-1.9.5/sparklyr/R/ml_clustering_lda.R | 239 + sparklyr-1.9.5/sparklyr/R/ml_clustering_power_iteration.R | 47 sparklyr-1.9.5/sparklyr/R/ml_constructor_utils.R | 16 sparklyr-1.9.5/sparklyr/R/ml_evaluate.R | 11 sparklyr-1.9.5/sparklyr/R/ml_evaluation_clustering.R | 39 sparklyr-1.9.5/sparklyr/R/ml_evaluation_prediction.R | 173 + sparklyr-1.9.5/sparklyr/R/ml_feature_binarizer.R | 42 sparklyr-1.9.5/sparklyr/R/ml_feature_bucketed_random_projection_lsh.R | 63 sparklyr-1.9.5/sparklyr/R/ml_feature_bucketizer.R | 99 sparklyr-1.9.5/sparklyr/R/ml_feature_chisq_selector.R | 136 - sparklyr-1.9.5/sparklyr/R/ml_feature_count_vectorizer.R | 95 sparklyr-1.9.5/sparklyr/R/ml_feature_dct.R | 56 sparklyr-1.9.5/sparklyr/R/ml_feature_dplyr_transformer.R | 37 sparklyr-1.9.5/sparklyr/R/ml_feature_elementwise_product.R | 60 sparklyr-1.9.5/sparklyr/R/ml_feature_feature_hasher.R | 65 sparklyr-1.9.5/sparklyr/R/ml_feature_hashing_tf.R | 51 sparklyr-1.9.5/sparklyr/R/ml_feature_idf.R | 47 sparklyr-1.9.5/sparklyr/R/ml_feature_imputer.R | 69 sparklyr-1.9.5/sparklyr/R/ml_feature_index_to_string.R | 47 sparklyr-1.9.5/sparklyr/R/ml_feature_interaction.R | 48 sparklyr-1.9.5/sparklyr/R/ml_feature_lsh_utils.R | 37 sparklyr-1.9.5/sparklyr/R/ml_feature_max_abs_scaler.R | 44 sparklyr-1.9.5/sparklyr/R/ml_feature_min_max_scaler.R | 55 sparklyr-1.9.5/sparklyr/R/ml_feature_minhash_lsh.R | 55 sparklyr-1.9.5/sparklyr/R/ml_feature_ngram.R | 47 sparklyr-1.9.5/sparklyr/R/ml_feature_normalizer.R | 51 sparklyr-1.9.5/sparklyr/R/ml_feature_one_hot_encoder.R | 70 sparklyr-1.9.5/sparklyr/R/ml_feature_one_hot_encoder_estimator.R | 58 sparklyr-1.9.5/sparklyr/R/ml_feature_pca.R | 63 sparklyr-1.9.5/sparklyr/R/ml_feature_polynomial_expansion.R | 51 sparklyr-1.9.5/sparklyr/R/ml_feature_quantile_discretizer.R | 122 sparklyr-1.9.5/sparklyr/R/ml_feature_r_formula.R | 68 sparklyr-1.9.5/sparklyr/R/ml_feature_regex_tokenizer.R | 67 sparklyr-1.9.5/sparklyr/R/ml_feature_robust_scaler.R | 71 sparklyr-1.9.5/sparklyr/R/ml_feature_sql_transformer.R | 35 sparklyr-1.9.5/sparklyr/R/ml_feature_standard_scaler.R | 55 sparklyr-1.9.5/sparklyr/R/ml_feature_stop_words_remover.R | 87 sparklyr-1.9.5/sparklyr/R/ml_feature_string_indexer.R | 80 sparklyr-1.9.5/sparklyr/R/ml_feature_string_indexer_model.R | 54 sparklyr-1.9.5/sparklyr/R/ml_feature_tokenizer.R | 43 sparklyr-1.9.5/sparklyr/R/ml_feature_vector_assembler.R | 43 sparklyr-1.9.5/sparklyr/R/ml_feature_vector_indexer.R | 66 sparklyr-1.9.5/sparklyr/R/ml_feature_vector_slicer.R | 47 sparklyr-1.9.5/sparklyr/R/ml_feature_word2vec.R | 89 sparklyr-1.9.5/sparklyr/R/ml_fpm_fpgrowth.R | 48 sparklyr-1.9.5/sparklyr/R/ml_fpm_prefixspan.R | 30 sparklyr-1.9.5/sparklyr/R/ml_helpers.R | 26 sparklyr-1.9.5/sparklyr/R/ml_mapping_tables.R | 46 sparklyr-1.9.5/sparklyr/R/ml_metrics.R | 59 sparklyr-1.9.5/sparklyr/R/ml_model_als.R | 7 sparklyr-1.9.5/sparklyr/R/ml_model_bisecting_kmeans.R | 8 sparklyr-1.9.5/sparklyr/R/ml_model_constructors.R | 88 sparklyr-1.9.5/sparklyr/R/ml_model_decision_tree.R | 69 sparklyr-1.9.5/sparklyr/R/ml_model_gaussian_mixture.R | 8 sparklyr-1.9.5/sparklyr/R/ml_model_generalized_linear_regression.R | 59 sparklyr-1.9.5/sparklyr/R/ml_model_gradient_boosted_trees.R | 71 sparklyr-1.9.5/sparklyr/R/ml_model_helpers.R | 46 sparklyr-1.9.5/sparklyr/R/ml_model_isotonic_regression.R | 15 sparklyr-1.9.5/sparklyr/R/ml_model_kmeans.R | 16 sparklyr-1.9.5/sparklyr/R/ml_model_lda.R | 3 sparklyr-1.9.5/sparklyr/R/ml_model_linear_regression.R | 26 sparklyr-1.9.5/sparklyr/R/ml_model_linear_svc.R | 16 sparklyr-1.9.5/sparklyr/R/ml_model_logistic_regression.R | 16 sparklyr-1.9.5/sparklyr/R/ml_model_naive_bayes.R | 16 sparklyr-1.9.5/sparklyr/R/ml_model_one_vs_rest.R | 16 sparklyr-1.9.5/sparklyr/R/ml_model_random_forest.R | 66 sparklyr-1.9.5/sparklyr/R/ml_model_utils.R | 3 sparklyr-1.9.5/sparklyr/R/ml_param_utils.R | 8 sparklyr-1.9.5/sparklyr/R/ml_persistence.R | 51 sparklyr-1.9.5/sparklyr/R/ml_pipeline_utils.R | 106 sparklyr-1.9.5/sparklyr/R/ml_print_utils.R | 8 sparklyr-1.9.5/sparklyr/R/ml_recommendation_als.R | 166 - sparklyr-1.9.5/sparklyr/R/ml_regression_aft_survival_regression.R | 155 - sparklyr-1.9.5/sparklyr/R/ml_regression_decision_tree_regressor.R | 60 sparklyr-1.9.5/sparklyr/R/ml_regression_gbt_regressor.R | 75 sparklyr-1.9.5/sparklyr/R/ml_regression_generalized_linear_regression.R | 117 sparklyr-1.9.5/sparklyr/R/ml_regression_isotonic_regression.R | 36 sparklyr-1.9.5/sparklyr/R/ml_regression_linear_regression.R | 81 sparklyr-1.9.5/sparklyr/R/ml_regression_random_forest_regressor.R | 61 sparklyr-1.9.5/sparklyr/R/ml_stat.R | 68 sparklyr-1.9.5/sparklyr/R/ml_transformation_methods.R | 18 sparklyr-1.9.5/sparklyr/R/ml_transformer_and_estimator.R | 6 sparklyr-1.9.5/sparklyr/R/ml_tuning.R | 107 sparklyr-1.9.5/sparklyr/R/ml_tuning_cross_validator.R | 79 sparklyr-1.9.5/sparklyr/R/ml_tuning_train_validation_split.R | 110 sparklyr-1.9.5/sparklyr/R/ml_utils.R | 98 sparklyr-1.9.5/sparklyr/R/ml_validator_utils.R | 40 sparklyr-1.9.5/sparklyr/R/mutation.R | 16 sparklyr-1.9.5/sparklyr/R/na_actions.R | 20 sparklyr-1.9.5/sparklyr/R/new_model_multilayer_perceptron.R | 16 sparklyr-1.9.5/sparklyr/R/params_validator.R | 24 sparklyr-1.9.5/sparklyr/R/precondition.R | 8 sparklyr-1.9.5/sparklyr/R/project_template.R | 14 sparklyr-1.9.5/sparklyr/R/qubole_connection.R | 4 sparklyr-1.9.5/sparklyr/R/sdf_interface.R | 194 - sparklyr-1.9.5/sparklyr/R/sdf_ml.R | 31 sparklyr-1.9.5/sparklyr/R/sdf_saveload.R | 16 sparklyr-1.9.5/sparklyr/R/sdf_sequence.R | 40 sparklyr-1.9.5/sparklyr/R/sdf_sql.R | 1 sparklyr-1.9.5/sparklyr/R/sdf_stat.R | 193 + sparklyr-1.9.5/sparklyr/R/sdf_unnest_longer.R | 24 sparklyr-1.9.5/sparklyr/R/sdf_unnest_wider.R | 19 sparklyr-1.9.5/sparklyr/R/sdf_utils.R | 3 sparklyr-1.9.5/sparklyr/R/sdf_wrapper.R | 113 sparklyr-1.9.5/sparklyr/R/shell_connection.R | 508 ++- sparklyr-1.9.5/sparklyr/R/spark_apply.R | 218 - sparklyr-1.9.5/sparklyr/R/spark_apply_bundle.R | 24 sparklyr-1.9.5/sparklyr/R/spark_compile.R | 197 - sparklyr-1.9.5/sparklyr/R/spark_connection.R | 10 sparklyr-1.9.5/sparklyr/R/spark_context_config.R | 35 sparklyr-1.9.5/sparklyr/R/spark_dataframe.R | 3 sparklyr-1.9.5/sparklyr/R/spark_extensions.R | 109 sparklyr-1.9.5/sparklyr/R/spark_gateway.R | 46 sparklyr-1.9.5/sparklyr/R/spark_gen_embedded_sources.R | 3 sparklyr-1.9.5/sparklyr/R/spark_globals.R | 4 sparklyr-1.9.5/sparklyr/R/spark_hive.R | 5 sparklyr-1.9.5/sparklyr/R/spark_ide.R | 96 sparklyr-1.9.5/sparklyr/R/spark_invoke.R | 13 sparklyr-1.9.5/sparklyr/R/spark_schema_from_rdd.R | 11 sparklyr-1.9.5/sparklyr/R/spark_sql.R | 32 sparklyr-1.9.5/sparklyr/R/spark_submit.R | 32 sparklyr-1.9.5/sparklyr/R/spark_update_embedded_sources.R | 12 sparklyr-1.9.5/sparklyr/R/spark_utils.R | 19 sparklyr-1.9.5/sparklyr/R/spark_verify_embedded_sources.R | 7 sparklyr-1.9.5/sparklyr/R/spark_version.R | 43 sparklyr-1.9.5/sparklyr/R/sql_utils.R | 2 sparklyr-1.9.5/sparklyr/R/stratified_sample.R | 8 sparklyr-1.9.5/sparklyr/R/stream_data.R | 395 +- sparklyr-1.9.5/sparklyr/R/stream_job.R | 36 sparklyr-1.9.5/sparklyr/R/stream_operations.R | 157 - sparklyr-1.9.5/sparklyr/R/stream_shiny.R | 35 sparklyr-1.9.5/sparklyr/R/stream_view.R | 61 sparklyr-1.9.5/sparklyr/R/synapse_connection.R | 28 sparklyr-1.9.5/sparklyr/R/test_connection.R | 29 sparklyr-1.9.5/sparklyr/R/tidiers_ml_aft_survival_regression.R | 6 sparklyr-1.9.5/sparklyr/R/tidiers_ml_als.R | 1 sparklyr-1.9.5/sparklyr/R/tidiers_ml_isotonic_regression.R | 6 sparklyr-1.9.5/sparklyr/R/tidiers_ml_lda.R | 10 sparklyr-1.9.5/sparklyr/R/tidiers_ml_linear_models.R | 54 sparklyr-1.9.5/sparklyr/R/tidiers_ml_logistic_regression.R | 7 sparklyr-1.9.5/sparklyr/R/tidiers_ml_multilayer_perceptron.R | 13 sparklyr-1.9.5/sparklyr/R/tidiers_ml_naive_bayes.R | 6 sparklyr-1.9.5/sparklyr/R/tidiers_ml_tree_models.R | 67 sparklyr-1.9.5/sparklyr/R/tidiers_ml_unsupervised_models.R | 47 sparklyr-1.9.5/sparklyr/R/tidiers_pca.R | 4 sparklyr-1.9.5/sparklyr/R/tidiers_utils.R | 15 sparklyr-1.9.5/sparklyr/R/tidyr_fill.R | 35 sparklyr-1.9.5/sparklyr/R/tidyr_nest.R | 29 sparklyr-1.9.5/sparklyr/R/tidyr_pivot_longer.R | 163 - sparklyr-1.9.5/sparklyr/R/tidyr_pivot_wider.R | 198 - sparklyr-1.9.5/sparklyr/R/tidyr_separate.R | 16 sparklyr-1.9.5/sparklyr/R/tidyr_unite.R | 23 sparklyr-1.9.5/sparklyr/R/tidyr_unnest.R | 48 sparklyr-1.9.5/sparklyr/R/tidyr_utils.R | 69 sparklyr-1.9.5/sparklyr/R/utils.R | 189 + sparklyr-1.9.5/sparklyr/R/worker_apply.R | 210 + sparklyr-1.9.5/sparklyr/R/worker_connect.R | 54 sparklyr-1.9.5/sparklyr/R/worker_connection.R | 3 sparklyr-1.9.5/sparklyr/R/worker_log.R | 14 sparklyr-1.9.5/sparklyr/R/worker_main.R | 61 sparklyr-1.9.5/sparklyr/R/yarn_cluster.R | 200 + sparklyr-1.9.5/sparklyr/R/yarn_config.R | 29 sparklyr-1.9.5/sparklyr/R/yarn_ui.R | 31 sparklyr-1.9.5/sparklyr/README.md | 14 sparklyr-1.9.5/sparklyr/inst/extdata/versions-next.json | 4 sparklyr-1.9.5/sparklyr/inst/extdata/versions.json | 22 sparklyr-1.9.5/sparklyr/man/collect_from_rds.Rd | 56 sparklyr-1.9.5/sparklyr/man/ft_binarizer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_bucketizer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_chisq_selector.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_count_vectorizer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_dct.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_elementwise_product.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_feature_hasher.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_hashing_tf.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_idf.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_imputer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_index_to_string.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_interaction.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_lsh.Rd | 68 sparklyr-1.9.5/sparklyr/man/ft_max_abs_scaler.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_min_max_scaler.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_ngram.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_normalizer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_one_hot_encoder.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_one_hot_encoder_estimator.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_pca.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_polynomial_expansion.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_quantile_discretizer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_r_formula.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_regex_tokenizer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_robust_scaler.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_standard_scaler.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_stop_words_remover.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_string_indexer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_tokenizer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_vector_assembler.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_vector_indexer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_vector_slicer.Rd | 66 sparklyr-1.9.5/sparklyr/man/ft_word2vec.Rd | 66 sparklyr-1.9.5/sparklyr/man/ml_aft_survival_regression.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_decision_tree.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_generalized_linear_regression.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_gradient_boosted_trees.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_isotonic_regression.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_linear_regression.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_linear_svc.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_logistic_regression.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_multilayer_perceptron_classifier.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_naive_bayes.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_one_vs_rest.Rd | 24 sparklyr-1.9.5/sparklyr/man/ml_random_forest.Rd | 24 sparklyr-1.9.5/sparklyr/man/reexports.Rd | 2 sparklyr-1.9.5/sparklyr/man/sdf_copy_to.Rd | 14 sparklyr-1.9.5/sparklyr/man/sdf_distinct.Rd | 14 sparklyr-1.9.5/sparklyr/man/sdf_random_split.Rd | 14 sparklyr-1.9.5/sparklyr/man/sdf_rbeta.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rbinom.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rcauchy.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rchisq.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_register.Rd | 14 sparklyr-1.9.5/sparklyr/man/sdf_rexp.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rgamma.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rgeom.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rhyper.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rlnorm.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rnorm.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rpois.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rt.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_runif.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_rweibull.Rd | 28 sparklyr-1.9.5/sparklyr/man/sdf_sample.Rd | 14 sparklyr-1.9.5/sparklyr/man/sdf_sort.Rd | 14 sparklyr-1.9.5/sparklyr/man/sdf_weighted_sample.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_adaptive_query_execution.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_advisory_shuffle_partition_size.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_auto_broadcast_join_threshold.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_coalesce_initial_num_partitions.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_coalesce_min_num_partitions.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_coalesce_shuffle_partitions.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_configuration.Rd | 14 sparklyr-1.9.5/sparklyr/man/spark_insert_table.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_load_table.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_avro.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_binary.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_csv.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_delta.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_image.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_jdbc.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_json.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_libsvm.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_orc.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_parquet.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_source.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_table.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_read_text.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_save_table.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_avro.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_csv.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_delta.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_jdbc.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_json.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_orc.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_parquet.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_source.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_table.Rd | 56 sparklyr-1.9.5/sparklyr/man/spark_write_text.Rd | 56 sparklyr-1.9.5/sparklyr/man/sql-transformer.Rd | 66 sparklyr-1.9.5/sparklyr/man/stream_write_csv.Rd | 6 sparklyr-1.9.5/sparklyr/man/stream_write_memory.Rd | 6 sparklyr-1.9.5/sparklyr/man/stream_write_table.Rd | 6 333 files changed, 13266 insertions(+), 7540 deletions(-)
Title: Network Meta-Analysis using Frequentist Methods
Description: A comprehensive set of functions providing frequentist methods for network meta-analysis (Balduzzi et al., 2023) <doi:10.18637/jss.v106.i02> and supporting Schwarzer et al. (2015) <doi:10.1007/978-3-319-21416-0>, Chapter 8 "Network Meta-Analysis":
- frequentist network meta-analysis following Rücker (2012) <doi:10.1002/jrsm.1058>;
- additive network meta-analysis for combinations of treatments (Rücker et al., 2020) <doi:10.1002/bimj.201800167>;
- network meta-analysis of binary data using the Mantel-Haenszel or non-central hypergeometric distribution method (Efthimiou et al., 2019) <doi:10.1002/sim.8158>, or penalised logistic regression (Evrenoglou et al., 2022) <doi:10.1002/sim.9562>;
- rankograms and ranking of treatments by the Surface under the cumulative ranking curve (SUCRA) (Salanti et al., 2013) <doi:10.1016/j.jclinepi.2010.03.016>;
- ranking of treatments using P-scores (frequentist analogue of SUCRAs without resampling) according to [...truncated...]
Author: Gerta Ruecker [aut] ,
Ulrike Krahn [aut],
Jochem Koenig [aut] ,
Orestis Efthimiou [aut] ,
Annabel Davies [aut] ,
Theodoros Papakonstantinou [aut] ,
Theodoros Evrenoglou [ctb] ,
Krzysztof Ciomek [ctb] ,
Nana-adjoa Kwarteng [ctb] ,
Guido Schwarzer [aut, [...truncated...]
Maintainer: Guido Schwarzer <guido.schwarzer@uniklinik-freiburg.de>
Diff between netmeta versions 3.6-0 dated 2026-06-10 and 3.6-1 dated 2026-06-20
DESCRIPTION | 8 ++++---- MD5 | 16 ++++++++-------- NEWS.md | 10 ++++++++++ R/forest.netbind.R | 4 ++++ R/forest.netmeta.R | 17 +++++++++++++++-- R/forest.netsplit.R | 4 ++++ R/forest.subgroup.netmeta.R | 2 ++ inst/doc/netmeta-workflow.pdf |binary inst/doc/netmeta.pdf |binary 9 files changed, 47 insertions(+), 14 deletions(-)
Title: Interactive Maps with 'Mapbox GL JS' and 'MapLibre GL JS'
Description: Provides an interface to the 'Mapbox GL JS' (<https://docs.mapbox.com/mapbox-gl-js/guides>)
and the 'MapLibre GL JS' (<https://maplibre.org/maplibre-gl-js/docs/>) interactive mapping libraries to help users
create custom interactive maps in R. Users can create interactive globe visualizations; layer 'sf' objects to create
filled maps, circle maps, 'heatmaps', and three-dimensional graphics; and customize map styles and views. The package
also includes utilities to use 'Mapbox' and 'MapLibre' maps in 'Shiny' web applications.
Author: Kyle Walker [aut, cre],
Egor Kotov [ctb]
Maintainer: Kyle Walker <kyle@walker-data.com>
Diff between mapgl versions 0.4.6 dated 2026-04-14 and 0.5.0 dated 2026-06-20
DESCRIPTION | 24 LICENSE.note |only MD5 | 143 NAMESPACE | 17 NEWS.md | 30 R/controls.R | 479 ++- R/data.R |only R/draw-sync.R |only R/flowmap.R |only R/h3j-h3t.R | 81 R/image.R | 58 R/layers.R | 321 +- R/legends.R | 616 +++ R/legends_compare.R | 292 + R/mapboxgl.R | 30 R/maplibre.R | 26 R/plugins.R | 301 + R/shiny.R | 56 R/slider.R |only R/sources.R | 70 R/style_helpers.R | 440 ++ R/tooltips_popups.R |only R/utils.R | 57 data |only inst/htmlwidgets/flowmap.css |only inst/htmlwidgets/flowmap.js |only inst/htmlwidgets/lib/bezier-mode |only inst/htmlwidgets/lib/d3 |only inst/htmlwidgets/lib/flowmap-gl |only inst/htmlwidgets/lib/h3j-h3t/h3j_h3t.js | 4 inst/htmlwidgets/lib/legend-interactivity/legend-interactivity.css | 49 inst/htmlwidgets/lib/legend-interactivity/legend-interactivity.js | 391 ++ inst/htmlwidgets/lib/maplibre-gl/maplibre-gl.css | 2 inst/htmlwidgets/lib/maplibre-gl/maplibre-gl.js | 8 inst/htmlwidgets/lib/slider |only inst/htmlwidgets/mapboxgl.js | 1476 ++++++++- inst/htmlwidgets/mapboxgl.yaml | 19 inst/htmlwidgets/mapboxgl_compare.js | 831 ++++- inst/htmlwidgets/mapboxgl_compare.yaml | 13 inst/htmlwidgets/maplibregl.js | 1589 +++++++++- inst/htmlwidgets/maplibregl.yaml | 19 inst/htmlwidgets/maplibregl_compare.js | 900 ++++- inst/htmlwidgets/maplibregl_compare.yaml | 11 inst/htmlwidgets/screenshot.js | 177 + inst/htmlwidgets/styles/slider-control.css |only man/add_bivariate_legend.Rd |only man/add_circle_layer.Rd | 14 man/add_coordinates_control.Rd |only man/add_draw_control.Rd | 61 man/add_fill_extrusion_layer.Rd | 10 man/add_fill_layer.Rd | 8 man/add_flowmap.Rd |only man/add_h3t_source.Rd |only man/add_heatmap_layer.Rd | 2 man/add_image.Rd | 8 man/add_layer.Rd | 10 man/add_line_layer.Rd | 10 man/add_slider_control.Rd |only man/add_symbol_layer.Rd | 8 man/as_time_property.Rd |only man/bivariate_palettes.Rd |only man/bivariate_scale.Rd |only man/bixi_flows.Rd |only man/bixi_locations.Rd |only man/cluster_options.Rd | 5 man/compare.Rd | 54 man/draw_attribute.Rd |only man/flowmap_color_schemes.Rd |only man/get_drawn_features.Rd | 13 man/interpolate_palette.Rd | 11 man/map_legends.Rd | 131 man/mapboxgl_compare_proxy.Rd | 5 man/mapgl-package.Rd | 5 man/maplibre_compare_proxy.Rd | 5 man/set_filter.Rd | 33 man/set_flowmap_filter.Rd |only man/set_flowmap_settings.Rd |only man/set_popup.Rd | 8 man/set_tooltip.Rd | 8 man/slider_style.Rd |only man/tooltip_style.Rd |only man/update_slider_control.Rd |only tests |only 83 files changed, 7905 insertions(+), 1034 deletions(-)