Title: Enhancing the 'parallel' Package
Description: Utility functions that enhance the 'parallel' package and support the built-in parallel backends of the 'future' package. For example, availableCores() gives the number of CPU cores available to your R process as given by the operating system, 'cgroups' and Linux containers, R options, and environment variables, including those set by job schedulers on high-performance compute clusters. If none is set, it will fall back to parallel::detectCores(). Another example is 'parallel::makeCluster(type = "RPSOCK")', which is backward compatible with 'parallel::makeCluster()' while doing a better job in setting up remote cluster workers without the need for configuring the firewall to do port-forwarding to your local computer.
Author: Henrik Bengtsson [aut, cre, cph] ,
Mike Cheng [ctb]
Maintainer: Henrik Bengtsson <henrikb@braju.com>
Diff between parallelly versions 1.47.0 dated 2026-04-17 and 1.48.0 dated 2026-06-29
DESCRIPTION | 9 - MD5 | 52 +++++----- NEWS.md | 40 +++++++ R/availableCores.R | 9 + R/availableWorkers.R | 11 +- R/cgroups.R | 50 ++++++--- R/makeClusterMPI.R | 7 - R/makeClusterPSOCK.R | 13 ++ R/makeClusterSequential.R | 12 ++ R/makeNodePSOCK.R | 35 ++++++ R/options.R | 159 +++++++++++++++++-------------- R/workRPSOCK.R |only build/vignette.rds |binary inst/doc/parallelly-01-intro.html | 21 ++-- inst/doc/parallelly-01-intro.md | 22 +++- inst/doc/parallelly-22-wine-workers.html | 29 ++--- inst/doc/parallelly-22-wine-workers.md | 29 ++--- inst/testme/test-availableCores.R | 47 +++++++++ inst/testme/test-availableWorkers.R | 48 +++++++++ inst/testme/test-makeNodePSOCK.R | 21 ++++ man/availableWorkers.Rd | 4 man/makeClusterMPI.Rd | 5 man/makeClusterPSOCK.Rd | 17 ++- man/makeClusterSequential.Rd | 13 ++ man/workRPSOCK.Rd |only man/zzz-parallelly.options.Rd | 47 ++++++--- vignettes/parallelly-01-intro.md | 22 +++- vignettes/parallelly-22-wine-workers.md | 29 ++--- 28 files changed, 547 insertions(+), 204 deletions(-)
Title: AI Assistant Gadget for 'RStudio'
Description: Provides an interactive 'RStudio' gadget for working with an AI
assistant during package and script development. The gadget can use selected
editor text, the active source file, package metadata, and uploaded files as
context for code explanation, code generation, documentation, and review
workflows. It offers model presets, assistant behavior settings, responsive
code-focused output, and explicit copy, insert, and replace actions for the
active source editor. API interactions via the 'httr' package are performed
asynchronously using 'promises' and 'future' to avoid blocking the R console.
The backend is configured via the OPENAI_API_KEY environment variable.
Author: Antoni Czolgowski [aut, cre]
Maintainer: Antoni Czolgowski <antoni.czolgowski@gmail.com>
Diff between PacketLLM versions 0.1.2 dated 2026-06-25 and 0.1.3 dated 2026-06-29
DESCRIPTION | 6 MD5 | 21 +-- NEWS.md | 7 + R/file_utils.R | 220 ++++++++++++++++++++++++++++++++++- R/llm_chat_app.R | 2 README.md | 10 + inst/WORDLIST | 2 inst/doc/PacketLLM-introduction.Rmd | 4 inst/doc/PacketLLM-introduction.html | 7 - man/read_file_content.Rd | 19 ++- tests/testthat/test-file_utils_csv.R |only vignettes/PacketLLM-introduction.Rmd | 4 12 files changed, 271 insertions(+), 31 deletions(-)
Title: Drug Response Modeling and Biomarker Discovery
Description: Allows for building drug response models using screening data between bulk RNA-Seq and a drug response metric and two additional tools for biomarker discovery that have been developed by the Huang Laboratory at University of Minnesota.
There are 3 main functions within this package.
(1) calcPhenotype() is used to build drug response models on RNA-Seq data and impute them on any other RNA-Seq dataset given to the model.
(2) GLDS() is used to calculate the general level of drug sensitivity, which can improve biomarker discovery.
(3) IDWAS() can take the results from calcPhenotype() and link the imputed response back to available genomic (mutation and CNV alterations) to identify biomarkers.
Each of these functions comes from a paper from the Huang research laboratory. Below gives the relevant paper for each function.
The package is described in Maeser et al. (2021) "oncoPredict: an R package for predicting in vivo or cancer patient drug response and biomarkers from cell line screening da [...truncated...]
Author: Robert Gruener [aut, cre] ,
Danielle Maeser [aut]
Maintainer: Robert Gruener <rgruener@umn.edu>
This is a re-admission after prior archival of version 1.2 dated 2024-04-05
Diff between oncoPredict versions 1.2 dated 2024-04-05 and 1.3.1 dated 2026-06-29
oncoPredict-1.2/oncoPredict/vignettes/Cell_Lines_Details.csv |only oncoPredict-1.2/oncoPredict/vignettes/DrugPredictions.txt |only oncoPredict-1.2/oncoPredict/vignettes/GDSC2_Expr_short.rds |only oncoPredict-1.2/oncoPredict/vignettes/GDSC2_Res.rds |only oncoPredict-1.2/oncoPredict/vignettes/cnv.txt |only oncoPredict-1.2/oncoPredict/vignettes/complete_matrix_output_GDSCv2.txt |only oncoPredict-1.2/oncoPredict/vignettes/gdscv2_drugs.txt |only oncoPredict-1.2/oncoPredict/vignettes/markerMat.txt |only oncoPredict-1.2/oncoPredict/vignettes/prostate_test_data.txt |only oncoPredict-1.2/oncoPredict/vignettes/screened_compunds_rel_8.2.csv |only oncoPredict-1.3.1/oncoPredict/DESCRIPTION | 64 oncoPredict-1.3.1/oncoPredict/MD5 | 87 oncoPredict-1.3.1/oncoPredict/NAMESPACE | 10 oncoPredict-1.3.1/oncoPredict/R/CALCPHENOTYPE.R | 889 +++--- oncoPredict-1.3.1/oncoPredict/R/GLDS.R | 143 oncoPredict-1.3.1/oncoPredict/R/IDWAS.R | 373 +- oncoPredict-1.3.1/oncoPredict/README.md | 6 oncoPredict-1.3.1/oncoPredict/build/vignette.rds |binary oncoPredict-1.3.1/oncoPredict/inst/doc/calcPhenotype.R | 137 oncoPredict-1.3.1/oncoPredict/inst/doc/calcPhenotype.Rmd | 137 oncoPredict-1.3.1/oncoPredict/inst/doc/calcPhenotype.html | 1438 ---------- oncoPredict-1.3.1/oncoPredict/inst/doc/cnv.R | 58 oncoPredict-1.3.1/oncoPredict/inst/doc/cnv.Rmd | 58 oncoPredict-1.3.1/oncoPredict/inst/doc/cnv.html | 121 oncoPredict-1.3.1/oncoPredict/inst/doc/glds.R | 89 oncoPredict-1.3.1/oncoPredict/inst/doc/glds.Rmd | 89 oncoPredict-1.3.1/oncoPredict/inst/doc/glds.html | 194 - oncoPredict-1.3.1/oncoPredict/inst/doc/mut.R | 51 oncoPredict-1.3.1/oncoPredict/inst/doc/mut.Rmd | 64 oncoPredict-1.3.1/oncoPredict/inst/doc/mut.html | 89 oncoPredict-1.3.1/oncoPredict/inst/extdata |only oncoPredict-1.3.1/oncoPredict/man/calcPhenotype.Rd | 44 oncoPredict-1.3.1/oncoPredict/man/completeMatrix.Rd | 12 oncoPredict-1.3.1/oncoPredict/man/doVariableSelection.Rd | 5 oncoPredict-1.3.1/oncoPredict/man/glds.Rd | 23 oncoPredict-1.3.1/oncoPredict/man/homogenizeData.Rd | 11 oncoPredict-1.3.1/oncoPredict/man/idwas.Rd | 30 oncoPredict-1.3.1/oncoPredict/man/map_cnv.Rd | 23 oncoPredict-1.3.1/oncoPredict/man/predictionAccuracybyCV.Rd |only oncoPredict-1.3.1/oncoPredict/man/summarizeGenesByMean.Rd | 5 oncoPredict-1.3.1/oncoPredict/tests |only oncoPredict-1.3.1/oncoPredict/vignettes/calcPhenotype.Rmd | 137 oncoPredict-1.3.1/oncoPredict/vignettes/cnv.Rmd | 58 oncoPredict-1.3.1/oncoPredict/vignettes/glds.Rmd | 89 oncoPredict-1.3.1/oncoPredict/vignettes/mut.Rmd | 64 45 files changed, 2015 insertions(+), 2583 deletions(-)
Title: Columnar Query Engine for Larger-than-RAM Data
Description: A minimal columnar query engine with lazy execution on datasets
larger than RAM. Provides 'dplyr'-like verbs (filter(), select(), mutate(),
group_by(), summarise(), joins, window functions) and common aggregations
(n(), sum(), mean(), min(), max(), sd(), first(), last()) backed by a
pure C11 pull-based execution engine and a custom on-disk format ('.vtr').
Reads and writes 'GeoTIFF' (including tiled and 'BigTIFF' layouts) and a
tiled raster format ('.vec') with overview pyramids and time cubes for
larger-than-RAM raster data. Streams vector operations (spatial transforms,
point-in-polygon and nearest-feature joins including a two-sided
grid-partitioned join, select-by-location, clip, erase, dissolve,
'rasterization', 'polygonization', and contouring) through 'sf', and runs
raster operations (zonal statistics, focal windows, terrain derivatives,
resample or 'reproject' warp, polygon masking, map algebra, and 'mosaicking')
in native C or over the tiled '.vec' format, one batch or tile at [...truncated...]
Author: Gilles Colling [aut, cre, cph]
Maintainer: Gilles Colling <gilles.colling051@gmail.com>
Diff between vectra versions 0.9.1 dated 2026-06-29 and 0.9.7 dated 2026-06-29
DESCRIPTION | 18 MD5 | 109 ++- NAMESPACE | 18 NEWS.md | 216 ++++++ R/expr.R | 57 + R/geom_expr.R |only R/network.R |only R/spatial.R | 954 ++++++++++++++++++++++++++++-- R/spatial_topology.R |only build/vignette.rds |binary inst/doc/coverage-topology.R |only inst/doc/coverage-topology.Rmd |only inst/doc/coverage-topology.html |only inst/doc/engine.html | 4 inst/doc/formats.html | 54 - inst/doc/geometry-expressions.R |only inst/doc/geometry-expressions.Rmd |only inst/doc/geometry-expressions.html |only inst/doc/indexing.html | 10 inst/doc/joins.html | 4 inst/doc/large-data.html | 4 inst/doc/networks.R |only inst/doc/networks.Rmd |only inst/doc/networks.html |only inst/doc/offload.html | 4 inst/doc/quickstart.html | 4 inst/doc/schema.html | 4 inst/doc/sdm.html | 4 inst/doc/spatial.html | 4 inst/doc/streaming-spatial.R | 41 + inst/doc/streaming-spatial.Rmd | 83 ++ inst/doc/streaming-spatial.html | 390 ++++++++---- inst/doc/string-ops.html | 4 man/geom_expressions.Rd |only man/spatial_centerline.Rd |only man/spatial_construct.Rd |only man/spatial_eliminate.Rd |only man/spatial_explode.Rd |only man/spatial_knn.Rd |only man/spatial_line_merge.Rd |only man/spatial_locate.Rd |only man/spatial_network.Rd |only man/spatial_overlay.Rd | 46 + man/spatial_polygonize.Rd |only man/spatial_route.Rd |only man/spatial_service_area.Rd |only man/spatial_simplify.Rd |only man/spatial_smooth.Rd |only man/spatial_snap.Rd |only man/spatial_snap_grid.Rd |only man/spatial_split.Rd |only man/spatial_topology.Rd |only src/edt.c | 4 src/expr.c | 3 src/expr.h | 15 src/expr_geom.c |only src/focal.c | 4 src/init.c | 10 src/network.c |only src/r_bridge_core.c | 15 src/vec_omp.h | 28 src/vtr_overlay.c | 4 src/vtr_spatial.c | 4 src/warp.c | 4 tests/testthat/test-geom-expr.R |only tests/testthat/test-network.R |only tests/testthat/test-spatial-construct.R |only tests/testthat/test-spatial-explode.R |only tests/testthat/test-spatial-knn.R |only tests/testthat/test-spatial-overlay-two.R |only tests/testthat/test-spatial-smooth.R |only tests/testthat/test-spatial-snap.R |only tests/testthat/test-spatial-split.R |only tests/testthat/test-spatial-topology.R |only vignettes/coverage-topology.Rmd |only vignettes/geometry-expressions.Rmd |only vignettes/networks.Rmd |only vignettes/streaming-spatial.Rmd | 83 ++ 78 files changed, 1888 insertions(+), 318 deletions(-)
Title: Replication of 'An Advanced Guide To Trade Policy Analysis'
Description: Datasets from Yotov, et al. (2016) <isbn:978-92-870-4367-2>
(An Advanced Guide to Trade Policy Analysis) and functions to
report regression summaries with clustered robust standard errors.
Author: Mauricio Vargas Sepulveda [aut, cre] ,
Alexey Kravchenko [ths],
Constanza Prado [ths],
Yoto Yotov [ths],
The United Nations [dtc, cph, fnd]
Maintainer: Mauricio Vargas Sepulveda <m.vargas.sepulveda@gmail.com>
Diff between tradepolicy versions 0.7.0 dated 2024-03-23 and 0.8.0 dated 2026-06-29
tradepolicy-0.7.0/tradepolicy/R/summaries.R |only tradepolicy-0.7.0/tradepolicy/R/utils-pipe.R |only tradepolicy-0.7.0/tradepolicy/man/pipe.Rd |only tradepolicy-0.7.0/tradepolicy/man/tp_summary_app_1.Rd |only tradepolicy-0.7.0/tradepolicy/man/tp_summary_app_2.Rd |only tradepolicy-0.7.0/tradepolicy/man/tp_summary_app_3.Rd |only tradepolicy-0.7.0/tradepolicy/tests |only tradepolicy-0.8.0/tradepolicy/DESCRIPTION | 26 ++++++------- tradepolicy-0.8.0/tradepolicy/MD5 | 20 +++------- tradepolicy-0.8.0/tradepolicy/NAMESPACE | 28 +------------- tradepolicy-0.8.0/tradepolicy/NEWS.md | 11 +++++ tradepolicy-0.8.0/tradepolicy/R/tradepolicy-package.R | 21 ++-------- tradepolicy-0.8.0/tradepolicy/data/agtpa_applications.rda |binary tradepolicy-0.8.0/tradepolicy/man/tradepolicy-package.Rd | 9 +++- 14 files changed, 44 insertions(+), 71 deletions(-)
Title: Querying and Managing Large Biodiversity Occurrence Datasets
Description: Facilitates the gathering of biodiversity occurrence data
from disparate sources. Metadata is managed throughout the process to facilitate
reporting and enhanced ability to repeat analyses.
Author: Hannah L. Owens [aut, cre] ,
Cory Merow [aut] ,
Brian Maitner [aut] ,
Jamie M. Kass [aut] ,
Vijay Barve [aut] ,
Robert P. Guralnick [aut] ,
Damiano Oldoni [rev] for rOpenSci, see
<https://github.com/ropensci/software-review/issues/407>)
Maintainer: Hannah L. Owens <hannah.owens@gmail.com>
This is a re-admission after prior archival of version 0.6.1 dated 2025-09-29
Diff between occCite versions 0.6.1 dated 2025-09-29 and 0.6.2 dated 2026-06-29
DESCRIPTION | 14 +- MD5 | 26 ++-- NEWS.md | 16 ++ R/GBIFtableCleanup.R | 78 +++----------- R/occCite_plotting.R | 48 +++++--- R/taxonRectification.R | 23 ++-- build/vignette.rds |binary inst/doc/a_Simple.html | 22 ++-- inst/doc/b_Advanced.html | 169 +++++++++++++++++-------------- man/plot.occCiteData.Rd | 20 ++- man/taxonRectification.Rd | 3 tests/testthat/test-occCitePrint.R | 8 + tests/testthat/test-sumFig.R | 25 ++-- tests/testthat/test-taxonRectification.R | 30 +++-- 14 files changed, 258 insertions(+), 224 deletions(-)
Title: Subsets of Randomly Selected Phylogenies from Existing
Mega-Phylogenies
Description: There are an increasing number of mega-phylogenies available nowadays,
with many of them being sets of thousands of posterior distribution phylogenies.
For ecological studies, we may need to randomly select many such posterior phylogenies
to conduct analyses. This data package serves this purpose by providing a small number (100 or 50)
of randomly selected posterior phylogenies (if available) so that we can readily use
them for our downstream analyses without repeating the downloading and selecting processes.
Author: Daijiang Li [aut, cre]
Maintainer: Daijiang Li <daijianglee@gmail.com>
Diff between megatrees versions 1.0.0 dated 2026-05-22 and 1.0.1 dated 2026-06-29
DESCRIPTION | 9 +++++---- MD5 | 4 ++-- tests/testthat/test_megatrees.R | 12 ++++++------ 3 files changed, 13 insertions(+), 12 deletions(-)
Title: Download and Analyze Spatial Development Data from 'INKAR'
Description: A professional R interface to download and analyze spatial
development indicators from the 'BBSR' 'INKAR' (Indicators and Maps for Spatial
and Urban Development) database. Features a bilingual interactive wizard,
fuzzy and normalized indicator search, multi-indicator downloads with automatic
tidy merging (long/wide), guaranteed consistent output schema, robust disk
caching with automatic retry, and 'ggplot2' themes for regional mapping.
Author: Omer Furkan Coban [aut, cre]
Maintainer: Omer Furkan Coban <oemer.furkan.coban@uni-oldenburg.de>
Diff between inkaR versions 0.6.2 dated 2026-04-02 and 0.6.6 dated 2026-06-29
DESCRIPTION | 25 - MD5 | 59 ++-- NAMESPACE | 8 NEWS.md | 48 +++ R/api.R | 11 R/data.R | 1 R/download.R | 550 +++++++++++++++++++++++++++++++---------- R/globals.R | 13 R/inkaR-package.R | 1 R/metadata.R | 183 ++++++++++++- R/plot.R | 138 +++++++++- R/utils.R | 51 +++ build/vignette.rds |binary data/indicators.rda |binary inst/WORDLIST |only inst/doc/introduction.R | 3 inst/doc/introduction.Rmd | 287 ++++++++++++++++----- inst/doc/introduction.html | 476 ++++++++++++++++++++++++++--------- man/compare_districts.Rd |only man/compare_regions.Rd |only man/figures/map_output.jpg |only man/get_themes.Rd |only man/indicators.Rd | 1 man/inkaR-package.Rd | 1 man/inkaR.Rd | 15 - man/inkar_shortcut.Rd |only man/inkar_trends.Rd |only man/plot_inkar.Rd | 25 + man/search_indicators.Rd | 5 man/update_indicators.Rd |only man/view_indicators.Rd | 5 tests/testthat/test-analysis.R |only tests/testthat/test-api.R | 65 ++++ tests/testthat/test-download.R |only vignettes/introduction.Rmd | 287 ++++++++++++++++----- vignettes/map_output.jpg |only 36 files changed, 1768 insertions(+), 490 deletions(-)
Title: Hypergraph-Based Sizing Function for Generalised Linear Step-Up
Method
Description: Calculates a sizing function based on the number of independent sets in the rejected hypergraph (Organ, Kenney & Gu, 2026, <doi:10.48550/arXiv.2606.20514>). The sizing function is designed to be used with the 'GLSUP' package.
Author: Toby Kenney [aut, cre]
Maintainer: Toby Kenney <tkenney@mathstat.dal.ca>
Diff between hypergraph.sizing versions 1.0.0 dated 2026-06-24 and 1.0.1 dated 2026-06-29
DESCRIPTION | 6 +++--- MD5 | 10 +++++----- R/CountVC_hyper.R | 6 ++++++ man/count.indep.hyper.Rd | 2 +- man/sizing.hyper.Rd | 2 +- src/Hypergraph2.cpp | 9 +++++++-- 6 files changed, 23 insertions(+), 12 deletions(-)
More information about hypergraph.sizing at CRAN
Permanent link
Title: Visualising and Interpreting Statistical Models Fit to
Compositional Data
Description: Statistical models fit to compositional data are often difficult to interpret due to the sum to 1 constraint on data variables. 'DImodelsVis' provides novel visualisations tools to aid with the interpretation of models fit to compositional data. All visualisations in the package are created using the 'ggplot2' plotting framework and can be extended like every other 'ggplot' object.
Author: Rishabh Vishwakarma [aut, cre] ,
Caroline Brophy [aut],
Laura Byrne [aut],
Catherine Hurley [aut]
Maintainer: Rishabh Vishwakarma <vishwakr@tcd.ie>
Diff between DImodelsVis versions 1.0.4 dated 2025-10-08 and 1.0.5 dated 2026-06-29
DImodelsVis-1.0.4/DImodelsVis/tests/testthat/_snaps/PredictionContributions/pc-with-data-manually-prepared.svg |only DImodelsVis-1.0.5/DImodelsVis/DESCRIPTION | 8 DImodelsVis-1.0.5/DImodelsVis/MD5 | 121 - DImodelsVis-1.0.5/DImodelsVis/NAMESPACE | 1 DImodelsVis-1.0.5/DImodelsVis/NEWS.md | 6 DImodelsVis-1.0.5/DImodelsVis/R/ConditionalTernary.R | 114 + DImodelsVis-1.0.5/DImodelsVis/R/GradientChange.R | 14 DImodelsVis-1.0.5/DImodelsVis/R/GroupedTernary.R | 11 DImodelsVis-1.0.5/DImodelsVis/R/ModelDiagnostics.R | 18 DImodelsVis-1.0.5/DImodelsVis/R/ModelSelection.R | 7 DImodelsVis-1.0.5/DImodelsVis/R/PredictionContributions.R | 14 DImodelsVis-1.0.5/DImodelsVis/R/SanityChecks.R | 28 DImodelsVis-1.0.5/DImodelsVis/R/SimplexPath.R | 16 DImodelsVis-1.0.5/DImodelsVis/R/Ternary.R | 214 ++- DImodelsVis-1.0.5/DImodelsVis/R/VisualiseEffects.R | 13 DImodelsVis-1.0.5/DImodelsVis/R/utilities.R | 128 -- DImodelsVis-1.0.5/DImodelsVis/README.md | 40 DImodelsVis-1.0.5/DImodelsVis/build/partial.rdb |binary DImodelsVis-1.0.5/DImodelsVis/build/vignette.rds |binary DImodelsVis-1.0.5/DImodelsVis/inst/WORDLIST | 4 DImodelsVis-1.0.5/DImodelsVis/inst/doc/DImodelsVis-with-DImodelsMulti-models.Rmd | 3 DImodelsVis-1.0.5/DImodelsVis/inst/doc/DImodelsVis-with-DImodelsMulti-models.html | 46 DImodelsVis-1.0.5/DImodelsVis/inst/doc/DImodelsVis-with-black-box-models.R | 5 DImodelsVis-1.0.5/DImodelsVis/inst/doc/DImodelsVis-with-black-box-models.Rmd | 7 DImodelsVis-1.0.5/DImodelsVis/inst/doc/DImodelsVis-with-black-box-models.html | 40 DImodelsVis-1.0.5/DImodelsVis/inst/doc/DImodelsVis-with-complex-models.html | 5 DImodelsVis-1.0.5/DImodelsVis/man/conditional_ternary.Rd | 13 DImodelsVis-1.0.5/DImodelsVis/man/conditional_ternary_data.Rd | 2 DImodelsVis-1.0.5/DImodelsVis/man/conditional_ternary_plot.Rd | 8 DImodelsVis-1.0.5/DImodelsVis/man/figures/README-prediction-contributions-1.png |binary DImodelsVis-1.0.5/DImodelsVis/man/gradient_change_data.Rd | 2 DImodelsVis-1.0.5/DImodelsVis/man/grouped_ternary.Rd | 7 DImodelsVis-1.0.5/DImodelsVis/man/grouped_ternary_data.Rd | 2 DImodelsVis-1.0.5/DImodelsVis/man/grouped_ternary_plot.Rd | 9 DImodelsVis-1.0.5/DImodelsVis/man/simplex_path_data.Rd | 2 DImodelsVis-1.0.5/DImodelsVis/man/ternary_data.Rd | 2 DImodelsVis-1.0.5/DImodelsVis/man/visualise_effects_data.Rd | 2 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ConditionalTernary/ct-add-var-in-dimodels.svg | 24 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ConditionalTernary/ct-dimodels-data-manual.svg | 72 - DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ConditionalTernary/ct-dimodels.svg | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ConditionalTernary/ct-manual-split-single-fg-species.svg | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ConditionalTernary/ct-over-three-fg-with-cust.svg | 24 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ConditionalTernary/ct-single-add-var-dimodels.svg | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ConditionalTernary/ct-with-scale-ternaries.svg |only DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-add-var-dimodels.svg | 24 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-basic-dimodels.svg | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-manual-split-single-species-in-fg.svg | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-over-three-fg-as-default.svg | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-over-three-fg-with-cust.svg | 24 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-single-add-var-dimodels.svg | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-with-dimodels-data-manual.svg | 24 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/GroupedTernary/gt-with-scale-ternaries.svg |only DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ModelDiagnostics/md-basic-plot-extreme-pies.svg | 268 ++-- DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/ModelDiagnostics/md-basic-plot.svg | 634 +++++----- DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/PredictionContributions/pc-with-data-manually-prepared-exp.svg |only DImodelsVis-1.0.5/DImodelsVis/tests/testthat/_snaps/PredictionContributions/pc-with-data-manually-prepared-ret.svg |only DImodelsVis-1.0.5/DImodelsVis/tests/testthat/test-ConditionalTernary.R | 12 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/test-GroupedTernary.R | 10 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/test-ModelDiagnostics.R | 4 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/test-PredictionContributions.R | 4 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/test-SimplexPath.R | 4 DImodelsVis-1.0.5/DImodelsVis/tests/testthat/test-Ternary.R | 6 DImodelsVis-1.0.5/DImodelsVis/vignettes/DImodelsVis-with-DImodelsMulti-models.Rmd | 3 DImodelsVis-1.0.5/DImodelsVis/vignettes/DImodelsVis-with-black-box-models.Rmd | 7 64 files changed, 1181 insertions(+), 959 deletions(-)
Title: Cumulative Link Models with 'CmdStanR'
Description: Fits cumulative link models (CLMs) for ordinal categorical data
using 'CmdStanR'. Supports various link functions including logit, probit,
cloglog, loglog, cauchit, and flexible parametric links such as
Generalized Extreme Value (GEV), Asymmetric Exponential Power (AEP),
and Symmetric Power. Models are pre-compiled using the 'instantiate'
package for fast execution without runtime compilation. Methods are
described in Agresti (2010, ISBN:978-0-470-08289-8),
Wang and Dey (2011) <doi:10.1007/s10651-010-0154-8>, and
Naranjo, Perez, and Martin (2015) <doi:10.1007/s11222-014-9449-1>.
Author: Tomotaka Momozaki [aut, cre]
Maintainer: Tomotaka Momozaki <momozaki.stat@gmail.com>
Diff between clmstan versions 0.1.1 dated 2026-02-12 and 0.1.2 dated 2026-06-29
DESCRIPTION | 6 +++--- MD5 | 6 +++--- NEWS.md | 11 +++++++++++ tests/testthat/test-loo-waic.R | 12 ++++++++++-- 4 files changed, 27 insertions(+), 8 deletions(-)
Title: Block Design for Response-Adaptive Randomization
Description: Computes power for response-adaptive randomization with a block
design that captures both the time and treatment effect. T. Chandereng,
R. Chappell (2019) <doi:10.48550/arXiv.1904.07758>.
Author: Thevaa Chandereng [aut, cre, cph] ,
Rick Chappell [aut, cph]
Maintainer: Thevaa Chandereng <thevaasiinen@gmail.com>
This is a re-admission after prior archival of version 1.0.2 dated 2020-01-21
Diff between blockRAR versions 1.0.2 dated 2020-01-21 and 1.0.3 dated 2026-06-29
DESCRIPTION | 29 - MD5 | 34 - NAMESPACE | 4 R/bdpbinomial.R | 6 R/binomialbayes.R | 259 +++++----- R/binomialfreq.R | 207 ++++---- README.md | 4 build/vignette.rds |binary inst/CITATION | 29 - inst/doc/blockRAR.R | 33 - inst/doc/blockRAR.Rmd | 14 inst/doc/blockRAR.html | 864 +++++++++++++++++++++++------------- man/bdpbinomial.Rd | 31 - man/binomialbayes.Rd | 29 - man/binomialfreq.Rd | 33 - tests/testthat/test_binomialbayes.R | 7 tests/testthat/test_binomialfreq.R | 27 - vignettes/blockRAR.Rmd | 14 18 files changed, 967 insertions(+), 657 deletions(-)
Title: Reproducible Code for 'Shiny' Objects
Description: Provides functionality to extract reactive expressions from a 'shiny' application and
convert them into stand-alone R scripts. This enables users to reproduce tables and visualisations
outside the interactive UI, facilitating integration into static reports or automated workflows
without requiring access to the original application source code.
Author: Ashley Baldry [aut, cre]
Maintainer: Ashley Baldry <ashley.baldry@acuityanalytics.com>
Diff between shinyreprex versions 0.1.0 dated 2026-04-02 and 0.2.0 dated 2026-06-29
shinyreprex-0.1.0/shinyreprex/inst/doc/shinyrepro.R |only shinyreprex-0.1.0/shinyreprex/inst/doc/shinyrepro.Rmd |only shinyreprex-0.1.0/shinyreprex/inst/doc/shinyrepro.html |only shinyreprex-0.1.0/shinyreprex/man/figures/logo.png |only shinyreprex-0.1.0/shinyreprex/vignettes/shinyrepro.Rmd |only shinyreprex-0.2.0/shinyreprex/DESCRIPTION | 23 ++-- shinyreprex-0.2.0/shinyreprex/MD5 | 38 +++---- shinyreprex-0.2.0/shinyreprex/NEWS.md | 11 ++ shinyreprex-0.2.0/shinyreprex/R/S7_utils.R | 11 +- shinyreprex-0.2.0/shinyreprex/R/call_chunk_reactval.R | 11 ++ shinyreprex-0.2.0/shinyreprex/R/call_chunk_switch.R |only shinyreprex-0.2.0/shinyreprex/R/call_chunk_utils.R | 18 ++- shinyreprex-0.2.0/shinyreprex/R/chunk_call.R | 11 +- shinyreprex-0.2.0/shinyreprex/README.md | 15 +- shinyreprex-0.2.0/shinyreprex/build/vignette.rds |binary shinyreprex-0.2.0/shinyreprex/inst/doc/shinyreprex.R |only shinyreprex-0.2.0/shinyreprex/inst/doc/shinyreprex.Rmd |only shinyreprex-0.2.0/shinyreprex/inst/doc/shinyreprex.html |only shinyreprex-0.2.0/shinyreprex/man/call_chunk_checks.Rd | 6 + shinyreprex-0.2.0/shinyreprex/man/figures/logo.svg |only shinyreprex-0.2.0/shinyreprex/man/s7_classes.Rd | 8 + shinyreprex-0.2.0/shinyreprex/tests/testthat/test-call_chunk_reactval.R | 54 ++++++++++ shinyreprex-0.2.0/shinyreprex/tests/testthat/test-call_chunk_subset.R | 34 ++++++ shinyreprex-0.2.0/shinyreprex/tests/testthat/test-call_chunk_switch.R |only shinyreprex-0.2.0/shinyreprex/tests/testthat/test-reprex_reactive.R | 28 +++++ shinyreprex-0.2.0/shinyreprex/vignettes/shinyreprex.Rmd |only 26 files changed, 224 insertions(+), 44 deletions(-)
Title: Authentication Management for 'Shiny' Applications
Description: Simple and secure authentication mechanism for single 'Shiny' applications.
Credentials can be stored in an encrypted 'SQLite' database or on your own SQL Database (PostgreSQL, MySQL, ...).
Source code of main application is protected until authentication is successful.
Author: Benoit Thieurmel [aut, cre],
Victor Perrier [aut]
Maintainer: Benoit Thieurmel <bthieurmel@gmail.com>
Diff between shinymanager versions 1.0.410 dated 2022-09-27 and 1.1.0 dated 2026-06-29
DESCRIPTION | 19 - MD5 | 70 +++-- NAMESPACE | 14 + NEWS.md | 22 + R/check_credentials.R | 41 ++- R/credentials-db-sql.R |only R/credentials-db.R | 58 ++++ R/fab_button.R | 6 R/language.R | 531 ++++++++++++++++++++++++++++++++++++------- R/module-admin.R | 411 +++++++++++++++++++++++++-------- R/module-auth.R | 77 +++--- R/module-edit_user.R | 80 +++++- R/module-pwd.R | 38 ++- R/modules-logs.R | 182 ++++++++------ R/onLoad.R | 2 R/secure-app.R | 107 +++++--- R/shiny-utils.R | 19 + R/tokens.R | 8 R/utils.R | 384 ++++++++++++++++++++++++++----- README.md | 224 +++++++++++++++--- build/vignette.rds |binary inst/assets/1497.gif |only inst/assets/bindEnter.js | 20 - inst/demo_app/server.R | 10 inst/demo_app/ui.R | 4 inst/doc/SQLite_Admin.R | 2 inst/doc/SQLite_Admin.html | 216 ++++++++--------- inst/sql_config |only man/check_credentials.Rd | 17 - man/create_db.Rd | 54 +++- man/create_sql_db.Rd |only man/custom-labels.Rd | 16 + man/module-authentication.Rd | 2 man/module-password.Rd | 2 man/secure-app.Rd | 13 - man/use_language.Rd | 4 36 files changed, 2008 insertions(+), 645 deletions(-)
Title: Fast Symbolic Multivariate Polynomials
Description: Fast manipulation of symbolic multivariate polynomials
using the 'Map' class of the Standard Template Library. The package
uses print and coercion methods from the 'mpoly' package but
offers speed improvements. It is comparable in speed to the 'spray'
package for sparse arrays, but retains the symbolic benefits of
'mpoly'. To cite the package in publications, use Hankin 2022
<doi:10.48550/ARXIV.2210.15991>. Uses 'disordR' discipline.
Author: Robin K. S. Hankin [aut, cre]
Maintainer: Robin K. S. Hankin <hankin.robin@gmail.com>
Diff between mvp versions 1.0-18 dated 2025-01-31 and 1.1-1 dated 2026-06-29
mvp-1.0-18/mvp/src/skimpy_init.c |only mvp-1.1-1/mvp/DESCRIPTION | 17 - mvp-1.1-1/mvp/MD5 | 57 +++--- mvp-1.1-1/mvp/NAMESPACE | 3 mvp-1.1-1/mvp/NEWS.md | 13 + mvp-1.1-1/mvp/R/skimpy.R | 96 ++++++---- mvp-1.1-1/mvp/R/skimpy_ops.R | 24 ++ mvp-1.1-1/mvp/build/partial.rdb |binary mvp-1.1-1/mvp/build/vignette.rds |binary mvp-1.1-1/mvp/data/lettersymbols.rda |binary mvp-1.1-1/mvp/inst/doc/mvp.R | 2 mvp-1.1-1/mvp/inst/doc/mvp.Rmd | 6 mvp-1.1-1/mvp/inst/doc/mvp.html | 52 ++--- mvp-1.1-1/mvp/man/Ops.mvp.Rd | 13 + mvp-1.1-1/mvp/man/coeffs.Rd | 31 ++- mvp-1.1-1/mvp/man/constant.Rd | 5 mvp-1.1-1/mvp/man/drop.Rd | 8 mvp-1.1-1/mvp/man/invert.Rd | 2 mvp-1.1-1/mvp/man/knight.Rd | 12 - mvp-1.1-1/mvp/man/laurent_factor.Rd |only mvp-1.1-1/mvp/man/mmvp.Rd |only mvp-1.1-1/mvp/man/mvp.Rd | 19 ++ mvp-1.1-1/mvp/man/ooom.Rd | 22 +- mvp-1.1-1/mvp/man/print.Rd | 4 mvp-1.1-1/mvp/man/subs.Rd | 91 +++++----- mvp-1.1-1/mvp/src/skimpy.cpp | 289 ++------------------------------ mvp-1.1-1/mvp/src/skimpy.h |only mvp-1.1-1/mvp/tests/testthat/test_aaa.R | 15 - mvp-1.1-1/mvp/tests/testthat/test_aag.R | 8 mvp-1.1-1/mvp/tests/testthat/test_aah.R |only mvp-1.1-1/mvp/vignettes/mvp.Rmd | 6 mvp-1.1-1/mvp/vignettes/mvp.bib | 74 +++++++- 32 files changed, 398 insertions(+), 471 deletions(-)
Title: Data Structures and Functions for Working with Forest Data
Description: Provides generic data structures and algorithms for use with forest
mensuration data in a consistent framework. The functions and objects
included are a collection of broadly applicable tools. More specialized
applications should be implemented in separate packages that build on this
foundation. Documentation about 'ForestElementsR' is provided by three
vignettes included in this package. For an introduction to the field of
forest mensuration, refer to the textbooks by Kershaw et al. (2017)
<doi:10.1002/9781118902028>, and van Laar and Akca (2007)
<doi:10.1007/978-1-4020-5991-9>.
Author: Peter Biber [aut, cre, cph] ,
Astor Torano Caicoya [aut] ,
Torben Hilmers [ctb]
Maintainer: Peter Biber <p.biber@tum.de>
Diff between ForestElementsR versions 2.2.0 dated 2025-10-29 and 3.0.0 dated 2026-06-29
DESCRIPTION | 12 MD5 | 169 +- NAMESPACE | 12 NEWS.md | 66 R/coding_table_builder.R |only R/csv_io.R |only R/data_species_cast_overrides.R |only R/data_wood_density_tum_wwk_short.R |only R/fe_ccircle_spatial.R | 3 R/fe_species_bavrn_state.R | 2 R/fe_species_bavrn_state_short.R | 2 R/fe_species_generic_methods.R | 129 + R/fe_species_ger_nfi_2012.R | 2 R/fe_species_helper_functions.R | 275 +++ R/fe_species_master.R | 2 R/fe_species_tum_wwk_long.R | 2 R/fe_species_tum_wwk_short.R | 16 R/fe_stand.R | 3 R/fe_stand_helpers_validation.R | 9 R/fe_stand_spatial.R | 3 R/forestelementsr_package.R | 33 R/forestelementsr_vctrs.R | 29 R/master_table_builder.R |only R/sysdata.rda |binary README.md | 8 build/partial.rdb |binary build/vignette.rds |binary data/species_cast_overrides.rda |only data/species_codings.rda |binary data/species_master_table.rda |binary data/wood_density_tum_wwk_short.rda |only inst/doc/forestelementsr_package.Rmd | 1712 +++++++++++------------ inst/doc/forestelementsr_package.html | 36 inst/doc/tree_species_codings.R | 34 inst/doc/tree_species_codings.Rmd | 400 ++++- inst/doc/tree_species_codings.html | 556 +++++-- inst/doc/yield_tables.html | 13 man/age_d_gnfi3.Rd | 8 man/age_h_gnfi3.Rd | 8 man/as_fe_species_bavrn_state.Rd | 2 man/as_fe_species_bavrn_state_short.Rd | 2 man/as_fe_species_ger_nfi_2012.Rd | 2 man/as_fe_species_master.Rd | 2 man/as_fe_species_tum_wwk_long.Rd | 2 man/as_fe_species_tum_wwk_short.Rd | 2 man/assmann_layers.Rd | 6 man/cast_overrides_from_csv.Rd |only man/coding_table_from_template.Rd |only man/coding_template_from_master.Rd |only man/d_100.Rd | 6 man/d_age_gnfi3.Rd | 8 man/d_dom_weise.Rd | 6 man/d_q.Rd | 6 man/fe_species_get_field_table.Rd |only man/fe_species_is_tree.Rd |only man/fe_species_non_tree_codes.Rd |only man/fe_yield_table.Rd | 18 man/h_100.Rd | 8 man/h_age_gnfi3.Rd | 8 man/h_dom_weise.Rd | 8 man/h_q.Rd | 8 man/h_q_from_d_q.Rd | 8 man/h_standard_bv.Rd | 4 man/h_standard_gnfi3.Rd | 4 man/master_table_from_csv.Rd |only man/master_template_csv.Rd |only man/plot.fe_yield_table.Rd | 18 man/shannon_index.Rd | 6 man/si_to_mai_age.Rd | 18 man/si_to_mai_max.Rd | 18 man/site_index.Rd | 18 man/species_cast_overrides.Rd |only man/species_profile.Rd | 6 man/stocking_level.Rd | 18 man/wood_density_tum_wwk_short.Rd |only man/yield_tables_for_species.Rd | 20 man/ytable_age_slice.Rd | 18 man/ytable_lookup.Rd | 18 man/ytable_max_slice.Rd | 18 tests/testthat/test_cast_overrides_builder.R |only tests/testthat/test_coding_builder.R |only tests/testthat/test_coding_convertibility.R |only tests/testthat/test_coding_laminarity.R |only tests/testthat/test_csv_io.R |only tests/testthat/test_finest_per_species.R |only tests/testthat/test_gnfi3_growth_functions.R | 298 ---- tests/testthat/test_h_standard_bv.R | 147 - tests/testthat/test_h_standard_gnfi3.R | 148 - tests/testthat/test_master_builder.R |only tests/testthat/test_species_cast_overrides.R |only tests/testthat/test_species_coding_casts.R | 79 - tests/testthat/test_species_coding_consistency.R | 55 tests/testthat/test_species_field_table.R |only tests/testthat/test_species_non_tree.R |only tests/testthat/test_standing_area_gnfi3.R | 163 -- tests/testthat/test_v_red_harvest_ubark.R | 22 tests/testthat/test_volume_v_gri.R | 3 vignettes/forestelementsr_package.Rmd | 1712 +++++++++++------------ vignettes/tree_species_codings.Rmd | 400 ++++- 99 files changed, 3826 insertions(+), 3031 deletions(-)
More information about ForestElementsR at CRAN
Permanent link
Title: Fast and Memory Efficient Fitting of Linear Models with
High-Dimensional Fixed Effects
Description: Fast and user-friendly estimation of generalized linear
models with multiple fixed effects and cluster the standard errors.
The method to obtain the estimated fixed-effects coefficients is based
on Stammann (2018) <doi:10.48550/arXiv.1707.01815>, Gaure (2013)
<doi:10.1016/j.csda.2013.03.024>, Berge (2018)
<https://ideas.repec.org/p/luc/wpaper/18-13.html>, and Correia et al.
(2020) <doi: 10.1177/1536867X20909691>. This implementation is
described in Vargas Sepulveda (2025)
<doi:10.1371/journal.pone.0331178>.
Author: Mauricio Vargas Sepulveda [aut, cre] ,
Joao Santos Silva [ths],
Julian Costas Fernandez [ctb],
Yoto Yotov [ctb]
Maintainer: Mauricio Vargas Sepulveda <m.vargas.sepulveda@gmail.com>
Diff between capybara versions 2.0.0 dated 2026-06-15 and 2.1.0 dated 2026-06-29
DESCRIPTION | 8 +++++--- MD5 | 18 +++++++++--------- NEWS.md | 8 ++++++++ inst/doc/asymmetric.Rmd | 7 ++++--- inst/doc/asymmetric.html | 9 +++++---- man/capybara-package.Rd | 1 + src/03_beta.h | 38 ++++++++++++++++++++++++++++++++++++++ src/07_lm.h | 18 ++++++++++++++++++ src/08_glm.h | 44 ++++++++++++++++++++++++++++++++++++++++---- vignettes/asymmetric.Rmd | 7 ++++--- 10 files changed, 132 insertions(+), 26 deletions(-)
Title: Sample Size and Power Calculation for Bayesian Testing with
Bayes Factor
Description: The goal of 'BayesPower' is to provide tools for Bayesian sample size determination and power analysis across a range of common hypothesis testing scenarios using Bayes factors. The main function, BayesPower_BayesFactor(), launches an interactive 'shiny' application for performing these analyses. The application also provides command-line code for reproducibility. Details of the methods are described in the tutorial by Wong, Pawel, and Tendeiro (2025) <doi:10.31234/osf.io/pgdac_v3>.
Author: Tsz Keung Wong [aut, cre],
Samuel Pawel [aut],
Jorge Tendeiro [aut]
Maintainer: Tsz Keung Wong <t.k.wong3004@gmail.com>
Diff between BayesPower versions 1.0.4 dated 2026-04-13 and 1.0.5 dated 2026-06-29
DESCRIPTION | 12 MD5 | 69 NEWS.md | 7 R/BF_S3class.r | 155 R/BF_app_backend.R |12879 ++++++++++++++++++----------------- R/BF_app_frontend.r | 144 R/BF_app_helpers.r | 546 - R/BF_pval.r | 4 R/BF_users_functions.r | 2469 +++--- R/RcppExports.R | 4 R/addin.R |only inst/report_templates/report_2p.Rmd | 114 inst/report_templates/report_bin.Rmd | 151 inst/report_templates/report_f.Rmd | 161 inst/report_templates/report_r.Rmd | 192 inst/report_templates/report_t1.Rmd | 141 inst/report_templates/report_t2.Rmd | 154 inst/rstudio |only man/BF10.bin.test.Rd | 87 man/BF10.cor.Rd | 79 man/BF10.f.test.Rd | 47 man/BF10.props.Rd | 53 man/BF10.ttest.OneSample.Rd | 64 man/BF10.ttest.TwoSample.Rd | 73 man/BFpower.bin.Rd | 143 man/BFpower.cor.Rd | 164 man/BFpower.f.test.Rd | 115 man/BFpower.props.Rd | 86 man/BFpower.ttest.OneSample.Rd | 126 man/BFpower.ttest.TwoSample.Rd | 144 man/plot.BFpower.Rd | 2 src/RcppExports.cpp | 12 src/grid.cpp | 101 tests |only 34 files changed, 10284 insertions(+), 8214 deletions(-)
Title: Analyzing Linear Trends in Species Occurrence Data
Description: Provides a comparative framework to detect species-specific spatial and
thermal responses to climate change using opportunistic occurrence data. Species
temporal trends in geographic position (via Earth-Centred Earth-Fixed vector
analysis) and environmental variables (temperature and elevation) are contrasted
against the overall trend of the complete dataset, allowing classification of
species into ecologically interpretable response categories. Approach described
in Lobo et al. (2023) <doi:10.1002/ece3.10674>.
Author: Mario Mingarro [aut, cre] ,
Emilio Garcia-Rosello [aut] ,
Jorge M. Lobo [aut]
Maintainer: Mario Mingarro <mario_mingarro@mncn.csic.es>
Diff between SppTrend versions 0.4 dated 2026-02-07 and 0.5 dated 2026-06-29
SppTrend-0.4/SppTrend/R/overall_trend.R |only SppTrend-0.4/SppTrend/R/spp_strategy.R |only SppTrend-0.4/SppTrend/R/spp_trend.R |only SppTrend-0.4/SppTrend/man/figures/E1.png |only SppTrend-0.4/SppTrend/man/figures/E2.png |only SppTrend-0.4/SppTrend/man/figures/E3.png |only SppTrend-0.4/SppTrend/man/figures/E4.png |only SppTrend-0.4/SppTrend/man/figures/E5.png |only SppTrend-0.4/SppTrend/man/figures/E6.png |only SppTrend-0.4/SppTrend/man/figures/E7.png |only SppTrend-0.4/SppTrend/man/overall_trend.Rd |only SppTrend-0.4/SppTrend/man/spp_strategy.Rd |only SppTrend-0.4/SppTrend/man/spp_trend.Rd |only SppTrend-0.4/SppTrend/tests/testthat/test-overall_trend.R |only SppTrend-0.4/SppTrend/tests/testthat/test-sp_strategy.R |only SppTrend-0.4/SppTrend/tests/testthat/test-spp_trend.R |only SppTrend-0.5/SppTrend/DESCRIPTION | 32 SppTrend-0.5/SppTrend/MD5 | 41 SppTrend-0.5/SppTrend/NAMESPACE | 31 SppTrend-0.5/SppTrend/R/SppTrend-package.R | 67 - SppTrend-0.5/SppTrend/R/get_elevation.R | 14 SppTrend-0.5/SppTrend/R/get_era5_tm.R | 16 SppTrend-0.5/SppTrend/R/spp_trend_environmental.R |only SppTrend-0.5/SppTrend/R/spp_trend_spatial.R |only SppTrend-0.5/SppTrend/R/utils-globals.R | 18 SppTrend-0.5/SppTrend/README.md | 453 +++------- SppTrend-0.5/SppTrend/man/SppTrend-package.Rd | 63 - SppTrend-0.5/SppTrend/man/figures/img_2.png |only SppTrend-0.5/SppTrend/man/get_elevation.Rd | 2 SppTrend-0.5/SppTrend/man/spp_trend_environmental.Rd |only SppTrend-0.5/SppTrend/man/spp_trend_spatial.Rd |only SppTrend-0.5/SppTrend/tests/testthat/test-spp_trend_environmental.R |only SppTrend-0.5/SppTrend/tests/testthat/test-spp_trend_spatial.R |only 33 files changed, 311 insertions(+), 426 deletions(-)
Title: Model Visualisation Toolbox for 'easystats' and 'ggplot2'
Description: Provides plotting utilities supporting packages in the 'easystats'
ecosystem (<https://github.com/easystats/easystats>) and some extra themes,
geoms, and scales for 'ggplot2'. Color scales are based on
<https://materialui.co/>.
References: Lüdecke et al. (2021) <doi:10.21105/joss.03393>.
Author: Daniel Luedecke [aut, cre] ,
Dominique Makowski [aut, inv] ,
Indrajeet Patil [aut] ,
Mattan S. Ben-Shachar [aut, ctb] ,
Brenton M. Wiernik [aut, ctb] ,
Remi Theriault [aut, ctb] ,
Philip Waggoner [aut, ctb] ,
Jeffrey R. Stevens [ctb] ,
Matthew Smith [ [...truncated...]
Maintainer: Daniel Luedecke <officialeasystats@gmail.com>
Diff between see versions 0.14.0 dated 2026-05-24 and 0.14.1 dated 2026-06-29
DESCRIPTION | 12 +- MD5 | 78 +++++++------- NAMESPACE | 4 NEWS.md | 22 +++- R/plot.check_dag.R | 11 ++ R/plot.check_model.R | 4 R/plot.check_overdisp.R | 2 R/plot.check_predictions.R | 2 R/plot.check_priors.R |only R/plot.estimate_density.R | 3 R/plot.means_by_group.R |only R/plot.parameters_brms_meta.R | 3 R/plot.parameters_pca_graph.R | 2 R/plot.parameters_sem.R | 120 ++++++++++++---------- R/plots.R | 10 + R/scale_color_colorhex.R | 37 +++--- build/partial.rdb |binary man/palette_colorhex.Rd | 15 +- man/plot.see_check_dag.Rd | 3 man/plot.see_check_priors.Rd |only man/plot.see_dw_groupmeans.Rd |only man/scale_color_colorhex.Rd | 19 +-- tests/testthat/test-check_model_theme.R |only tests/testthat/test-plot.check_dag.R | 5 tests/testthat/test-plot.check_normality.R | 2 tests/testthat/test-plot.check_outliers.R | 2 tests/testthat/test-plot.compare_parameters.R | 2 tests/testthat/test-plot.effectsize_table.R | 1 tests/testthat/test-plot.n_factors.R | 1 tests/testthat/test-plot.p_direction.R | 2 tests/testthat/test-plot.p_significance.R | 6 - tests/testthat/test-plot.parameters_model.R | 6 - tests/testthat/test-plot.performance_pp_check.R | 2 tests/testthat/test-plot.performance_roc.R | 1 tests/testthat/test-plot.simulate_parameters.R | 2 tests/testthat/test-scale_color_colorhex_c.R | 1 tests/testthat/test-vdiffr_bayestestr_plots.R | 1 tests/testthat/test-vdiffr_check_model.R | 57 +++------- tests/testthat/test-vdiffr_check_overdispersion.R |only tests/testthat/test-vdiffr_check_predictions.R | 34 +++++- tests/testthat/test-vdiffr_check_priors.R |only tests/testthat/test-vdiffr_geoms_coords.R | 2 tests/testthat/test-vdiffr_means_by_group.R |only tests/testthat/test-vdiffr_scale_color.R | 2 44 files changed, 294 insertions(+), 182 deletions(-)
Title: Record Linkage Based on an Entropy-Maximizing Classifier
Description: The goal of 'automatedRecLin' is to perform record linkage (also known as entity resolution) in unsupervised or supervised settings. It compares pairs of records from two datasets using selected comparison functions to estimate the probability or density ratio between matched and non-matched records. Based on these estimates, it predicts a set of matches that maximizes entropy. For details see: Lee et al. (2022) <https://www150.statcan.gc.ca/n1/pub/12-001-x/2022001/article/00007-eng.htm>, Vo et al. (2023) <https://ideas.repec.org/a/eee/csdana/v179y2023ics0167947322002365.html>, Sugiyama et al. (2008) <doi:10.1007/s10463-008-0197-x>.
Author: Adam Struzik [aut, cre] ,
Maciej Beresewicz [aut, ctb]
Maintainer: Adam Struzik <adastr5@st.amu.edu.pl>
Diff between automatedRecLin versions 1.1.1 dated 2026-05-21 and 1.1.2 dated 2026-06-29
DESCRIPTION | 6 +- MD5 | 35 +++++++----- NAMESPACE | 1 NEWS.md | 10 +++ R/internals.R | 103 ++++++++++++++++++++++++++------------ R/join_records.R |only R/predict.R | 2 R/supervised_learning.R | 2 R/unsupervised_learning.R | 26 ++++++--- README.md | 10 +++ inst/doc/mec-blocking.R | 2 inst/doc/mec-blocking.Rmd | 2 inst/doc/mec-blocking.html | 2 inst/tinytest/test_join_records.R |only inst/tinytest/test_mec_blocking.R | 48 +++++++++++++++++ man/custom_rec_lin_model.Rd | 2 man/join_records.Rd |only man/mec_blocking.Rd | 13 ++-- man/predict.rec_lin_model.Rd | 2 vignettes/mec-blocking.Rmd | 2 20 files changed, 198 insertions(+), 70 deletions(-)
More information about automatedRecLin at CRAN
Permanent link
Title: Data Class and Tools for Handling Spatial-Temporal Data
Description: Data class for increased interoperability working with
spatial-temporal data together with corresponding functions and
methods (conversions, basic calculations and basic data manipulation).
The class distinguishes between spatial, temporal and other dimensions
to facilitate the development and interoperability of tools build for
it. Additional features are name-based addressing of data and internal
consistency checks (e.g. checking for the right data order in
calculations).
Author: Jan Philipp Dietrich [aut, cre] ,
Benjamin Leon Bodirsky [aut] ,
Markus Bonsch [aut],
Florian Humpenoeder [aut] ,
Stephen Bi [aut],
Kristine Karstens [aut] ,
Debbora Leip [aut] ,
Pascal Sauer [aut] ,
Lavinia Baumstark [ctb] ,
Christoph Bertram [ctb], [...truncated...]
Maintainer: Jan Philipp Dietrich <dietrich@pik-potsdam.de>
Diff between magclass versions 7.4.3 dated 2026-04-17 and 7.5.0 dated 2026-06-29
DESCRIPTION | 10 +- MD5 | 171 +++++++++++++++++++-------------------- NAMESPACE | 1 R/aperm.R |only README.md | 12 +- inst/doc/magclass-concept.html | 4 inst/doc/magclass-expansion.html | 4 inst/doc/magclass.html | 4 inst/doc/magclass6.html | 4 man/addDim.Rd | 14 +-- man/add_columns.Rd | 14 +-- man/add_dimension.Rd | 14 +-- man/aperm.magpie.Rd |only man/as.RasterBrick.Rd | 14 +-- man/as.SpatRaster.Rd | 14 +-- man/as.SpatRasterDataset.Rd | 14 +-- man/as.SpatVector.Rd | 14 +-- man/as.array-methods.Rd | 16 +-- man/as.data.frame-methods.Rd | 16 +-- man/as_tibble.magpie.Rd | 14 +-- man/cbind.magpie.Rd | 12 +- man/clean_magpie.Rd | 8 - man/colSums-methods.Rd | 4 man/collapseDim.Rd | 14 +-- man/collapseNames.Rd | 14 +-- man/commonYears.Rd | 8 - man/complete_magpie.Rd | 8 - man/convergence.Rd | 8 - man/copy.attributes.Rd | 8 - man/copy.magpie.Rd | 12 +- man/dimCode.Rd | 14 +-- man/dimExists.Rd | 18 ++-- man/dimOrder.Rd | 14 +-- man/dimReduce.Rd | 14 +-- man/dimSums.Rd | 2 man/extend.Rd | 12 +- man/fulldim.Rd | 18 ++-- man/getCPR.Rd | 24 ++--- man/getCells.Rd | 24 ++--- man/getComment.Rd | 24 ++--- man/getCoords.Rd | 24 ++--- man/getDim.Rd | 24 ++--- man/getItems.Rd | 24 ++--- man/getNames.Rd | 24 ++--- man/getRegionList.Rd | 24 ++--- man/getRegions.Rd | 24 ++--- man/getSets.Rd | 24 ++--- man/getYears.Rd | 24 ++--- man/guessResolution.Rd | 4 man/hasCoords.Rd | 18 ++-- man/hasSets.Rd | 18 ++-- man/head.magpie.Rd | 10 +- man/is.temporal.Rd | 18 ++-- man/isYear.Rd | 18 ++-- man/lowpass.Rd | 8 - man/magpie_expand.Rd | 12 +- man/magpiesort.Rd | 12 +- man/magpply.Rd | 8 - man/matchDim.Rd | 12 +- man/maxample.Rd | 10 +- man/mbind.Rd | 12 +- man/mcalc.Rd | 8 - man/mplot.Rd | 10 +- man/mselect.Rd | 8 - man/ncells.Rd | 18 ++-- man/ndim.Rd | 18 ++-- man/new.magpie.Rd | 8 - man/print.magpie.Rd | 10 +- man/read.magpie.Rd | 12 +- man/read.report.Rd | 12 +- man/replace_non_finite.Rd | 6 - man/rowSums-methods.Rd | 4 man/sameDims.Rd | 18 ++-- man/setItems.Rd | 24 ++--- man/setNames-methods.Rd | 26 ++--- man/show-methods.Rd | 12 +- man/spatRasterToDataset.Rd | 4 man/str.magpie.Rd | 10 +- man/time_interpolate.Rd | 8 - man/unitjoin.Rd | 6 - man/unitsplit.Rd | 6 - man/unwrap.Rd | 14 +-- man/where.Rd | 8 - man/wrap.Rd | 14 +-- man/write.magpie.Rd | 12 +- man/write.report.Rd | 12 +- man/write.report2.Rd | 12 +- tests/testthat/test-aperm.R |only 88 files changed, 635 insertions(+), 631 deletions(-)
Title: DBI Package for the DuckDB Database Management System
Description: The DuckDB project is an embedded analytical data management
system with support for the Structured Query Language (SQL). This
package includes all of DuckDB and an R Database Interface (DBI)
connector.
Author: Hannes Muehleisen [aut] ,
Mark Raasveldt [aut] ,
Kirill Mueller [cre] ,
Stichting DuckDB Foundation [cph],
Apache Software Foundation [cph],
PostgreSQL Global Development Group [cph],
The Regents of the University of California [cph],
Cameron Desrocher [...truncated...]
Maintainer: Kirill Mueller <kirill@cynkra.com>
Diff between duckdb versions 1.5.4.1 dated 2026-06-28 and 1.5.4.2 dated 2026-06-29
DESCRIPTION | 6 +++--- MD5 | 10 ++++++---- NEWS.md | 6 ++++++ R/extensions.R | 33 ++++++++++++++++++++++++++++++--- src/duckdb.tar.xz |binary tests/testthat/test-storage-cli-e2e.R |only tests/testthat/test-storage-home.R |only 7 files changed, 45 insertions(+), 10 deletions(-)
Title: Common String Format Validation
Description: Validates common string formats including financial
identifiers (ISIN, CUSIP, SEDOL, FIGI, IBAN, LEI), publication
identifiers (ISBN, ISSN, DOI, ORCID), and general formats (email,
UUID, URL, semver), with check digit verification where applicable.
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between checkstring versions 0.1.0 dated 2026-03-05 and 0.2.0 dated 2026-06-29
DESCRIPTION | 8 +- MD5 | 19 +++- NAMESPACE | 5 + NEWS.md | 7 + R/assertions.R | 4 + R/string.R | 167 +++++++++++++++++++++++++++++++++++++++++-- README.md | 4 + man/is_color_hex.Rd |only man/is_ipv6.Rd |only man/is_iso_date.Rd |only man/is_iso_datetime.Rd |only man/is_mime.Rd |only tests/testthat/test-string.R | 108 +++++++++++++++++++++++++++ 13 files changed, 308 insertions(+), 14 deletions(-)
Title: Client for the 'World Bank' APIs
Description: Download and search data from the 'World Bank' APIs,
including the 'Indicators' API, the 'Poverty and Inequality Platform
(PIP)' API, the 'Finances One' API, and the 'Projects' API. See
<https://datahelpdesk.worldbank.org/knowledgebase/articles/889386-developer-information-overview>
for further details.
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between worldbank versions 0.9.0 dated 2026-05-03 and 0.9.1 dated 2026-06-29
DESCRIPTION | 7 ++-- MD5 | 28 +++++++++---------- NAMESPACE | 1 NEWS.md | 4 ++ R/assertions.R | 2 - R/cache.R | 6 ++++ R/fone.R | 10 ++----- R/httr2.R | 5 +++ R/indicators.R | 40 +++++++++++----------------- R/pip.R | 55 ++++++++++----------------------------- R/projects.R | 2 - R/utils.R | 18 +++++------- R/worldbank-package.R | 1 man/cache.Rd | 6 ++++ tests/testthat/test-indicators.R | 7 ++++ 15 files changed, 93 insertions(+), 99 deletions(-)
Title: Tailored Knowledge Catalog
Description: Facilitate the management of data from knowledge
resources that are frequently used alone or together
in research environments.
In 'TKCat', knowledge resources are manipulated as modeled database (MDB)
objects. These objects provide access to the data tables along with a general
description of the resource and a detailed data model documenting the
tables, their fields and their relationships.
These MDBs are then gathered in catalogs that can be easily
explored and shared.
Finally, 'TKCat' provides tools to easily subset, filter and combine MDBs and
create new catalogs suited for specific needs.
Author: Patrice Godard [aut, cre, cph]
Maintainer: Patrice Godard <patrice.godard@gmail.com>
Diff between TKCat versions 1.2.1 dated 2026-05-19 and 1.2.2 dated 2026-06-29
DESCRIPTION | 6 +- MD5 | 14 +++--- NAMESPACE | 2 R/ClickHouse.R | 97 ++++++++++++++++++++++++++++++++++++++++++++ inst/doc/TKCat-KMR-POK.html | 4 - inst/doc/TKCat.html | 22 ++++----- inst/pkgdown.yml | 2 man/ch_join_query.Rd |only man/ch_union_query.Rd |only 9 files changed, 124 insertions(+), 23 deletions(-)
Title: Data Model for 'teal' Applications
Description: Provides a 'teal_data' class as a unified data model for
'teal' applications focusing on reproducibility and relational data.
Author: Dawid Kaledkowski [aut] ,
Aleksander Chlebowski [aut] ,
Marcin Kosinski [aut],
Andre Verissimo [aut] ,
Pawel Rucki [aut],
Mahmoud Hallal [aut],
Nikolas Burkoff [aut],
Maciej Nasinski [aut],
Konrad Pagacz [aut],
Junlue Zhao [aut],
Chendi Liao [rev],
D [...truncated...]
Maintainer: Dony Unardi <unardid@gene.com>
Diff between teal.data versions 0.8.0 dated 2025-08-19 and 0.8.1 dated 2026-06-29
DESCRIPTION | 20 ++++++++++---------- MD5 | 14 +++++++------- NEWS.md | 4 ++++ README.md | 14 -------------- build/vignette.rds |binary inst/doc/teal-data-reproducibility.html | 13 +++++++------ inst/doc/teal-data.html | 2 +- man/teal.data-package.Rd | 4 ++-- 8 files changed, 31 insertions(+), 40 deletions(-)
Title: Interactive Processing and Segmentation of Forest TLS
Point-Cloud Data
Description: Tools for the processing, segmentation, and analysis of terrestrial laser
scanning (TLS and MLS) forest point-cloud data. The package provides fast
voxel-based processing, classification of point clouds into forest
floor, understory, canopy, and woody components, and algorithms for
single-tree analysis and structural characterization. Methods are designed
to handle large and dense point-cloud datasets efficiently, supporting
applications in forest structure assessment, connectivity analysis, and
fire-risk evaluation. Input data are provided as '.xyz', '.txt', '.las', or '.laz' point-cloud files.
For methodological details, see Ferrara and Arrizza (2025)
<https://hdl.handle.net/20.500.14243/533471> and Ferrara et al. (2018)
<doi:10.1016/j.agrformet.2018.04.008>.
Author: Roberto Ferrara [aut, cre] ,
Stefano Arrizza [ctb]
Maintainer: Roberto Ferrara <roberto.ferrara@cnr.it>
Diff between PiC versions 3.3 dated 2026-06-27 and 3.3.1 dated 2026-06-29
DESCRIPTION | 6 MD5 | 10 NEWS.md | 18 R/Forest_seg_v3_3_9.r | 149 ++++++- README.md | 961 ++++++++++++++++---------------------------------- man/Forest_seg.Rd | 145 ++++++- 6 files changed, 589 insertions(+), 700 deletions(-)
Title: ISO 3166-1 Country Codes
Description: ISO 3166-1 country codes and ISO 4217 currency codes provided
by the International Organization for Standardization.
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between isocountry versions 0.6.0 dated 2026-02-05 and 0.6.1 dated 2026-06-29
DESCRIPTION | 9 +++++---- MD5 | 12 ++++++------ NEWS.md | 4 ++++ R/data.R | 2 +- data/isocountry.rda |binary data/isocurrency.rda |binary man/isocurrency.Rd | 2 +- 7 files changed, 17 insertions(+), 12 deletions(-)
Title: Client for the Ifo Institute Time Series
Description: Download ifo business survey data and more time series from
ifo institute <https://www.ifo.de/en/ifo-time-series>.
Author: Maximilian Muecke [aut, cre]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between ifo versions 0.2.3 dated 2026-02-06 and 0.2.4 dated 2026-06-29
DESCRIPTION | 9 +++++---- MD5 | 16 ++++++++-------- NEWS.md | 4 ++++ R/ifo.R | 4 ++++ README.md | 6 +++--- man/figures/README-plotting-1.png |binary man/ifo-package.Rd | 5 +++++ man/ifo_climate.Rd | 3 +++ tests/testthat/test-ifo.R | 4 +++- 9 files changed, 35 insertions(+), 16 deletions(-)
Title: Point-and-Click GUI Client for 'dqcheckr'
Description: A graphical user interface for the 'dqcheckr' package. Provides a
point-and-click 'shiny' application for configuring dataset quality checks,
running them against recurring file deliveries, and browsing historical
check results — without writing any R code.
Author: Mick Mioduszewski [aut, cre]
Maintainer: Mick Mioduszewski <mick@mioduszewski.net>
Diff between dqcheckrGUI versions 0.1.0 dated 2026-06-24 and 0.2.0 dated 2026-06-29
DESCRIPTION | 14 +++-- MD5 | 41 ++++++++-------- NEWS.md | 65 ++++++++++++++++++++++++- R/dqcheckrGUI-package.R | 18 ++++++- R/run_app.R | 26 +++++++++- inst/app/R/server_global.R | 19 +++++-- inst/app/R/server_run.R | 17 ++++-- inst/app/R/server_wizard.R | 17 +++++- inst/app/R/ui_wizard.R | 3 - inst/app/app.R | 61 +++++++++++++++++++++-- inst/doc/dqcheckrGUI.R | 26 ++++++++++ inst/doc/dqcheckrGUI.Rmd | 92 +++++++++++++++++++++++++++++------- inst/doc/dqcheckrGUI.html | 97 ++++++++++++++++++++++++++------------ man/dqcheckrGUI-package.Rd |only man/run_app.Rd | 18 ++++++- tests/testthat/setup.R | 3 - tests/testthat/test-config-io.R | 2 tests/testthat/test-history.R | 4 - tests/testthat/test-ui-behavior.R | 11 ++++ tests/testthat/test-wizard-edit.R | 9 +++ tests/testthat/test-wizard-new.R | 5 + vignettes/dqcheckrGUI.Rmd | 92 +++++++++++++++++++++++++++++------- 22 files changed, 515 insertions(+), 125 deletions(-)
Title: Biological Entity Dictionary (BED)
Description: An interface for the 'Neo4j' database providing
mapping between different identifiers of biological entities.
This Biological Entity Dictionary (BED)
has been developed to address three main challenges.
The first one is related to the completeness of identifier mappings.
Indeed, direct mapping information provided by the different systems
are not always complete and can be enriched by mappings provided by other
resources.
More interestingly, direct mappings not identified by any of these
resources can be indirectly inferred by using mappings to a third reference.
For example, many human Ensembl gene ID are not directly mapped to any
Entrez gene ID but such mappings can be inferred using respective mappings
to HGNC ID. The second challenge is related to the mapping of deprecated
identifiers. Indeed, entity identifiers can change from one resource
release to another. The identifier history is provided by some resources,
such as Ensembl or the NCBI, but it is generally not used by mapping [...truncated...]
Author: Patrice Godard [aut, cre, cph]
Maintainer: Patrice Godard <patrice.godard@gmail.com>
Diff between BED versions 1.6.2 dated 2025-06-03 and 1.6.3 dated 2026-06-29
DESCRIPTION | 8 - MD5 | 16 +- R/beidsModule.R | 30 +++- R/searchBeid.R | 32 +++- build/vignette.rds |binary inst/doc/BED.html | 374 ++++++++++++++++++++++++++++------------------------- inst/pkgdown.yml | 6 man/beidsServer.Rd | 23 ++- man/searchBeid.Rd | 11 + 9 files changed, 293 insertions(+), 207 deletions(-)
Title: Comprehensive ARDL: Panel, Bootstrap and Fourier Methods
Description: A unified framework for Autoregressive Distributed Lag (ARDL) modeling
and cointegration analysis. Implements Panel ARDL with Pooled Mean Group (PMG),
Mean Group (MG), and Dynamic Fixed Effects (DFE) estimators following
Pesaran, Shin & Smith (1999) <doi:10.1002/jae.616>.
Provides bootstrap-based bounds testing per Pesaran, Shin & Smith (2001)
<doi:10.1002/jae.616>. Includes Quantile Nonlinear ARDL (QNARDL) combining
distributional and asymmetric effects based on Shin, Yu & Greenwood-Nimmo (2014)
<doi:10.1007/978-1-4899-8008-3_9>, and Fourier ARDL for modeling smooth
structural breaks following Enders & Lee (2012) <doi:10.1016/j.econlet.2012.05.019>.
Features include Augmented ARDL (AARDL) with deferred t and F tests,
Multiple-Threshold NARDL for complex asymmetries, Rolling/Recursive ARDL
for time-varying relationships, and Panel NARDL for nonlinear panel cointegration.
All methods include comprehensive diagnostics, publication-ready outputs,
an [...truncated...]
Author: Muhammad Abdullah Alkhalaf [aut, cre] ,
Merwan Roudane [ctb] ,
Yeleazar Levchenko [ctb] )
Maintainer: Muhammad Abdullah Alkhalaf <muhammedalkhalaf@gmail.com>
Diff between ardlverse versions 1.1.3 dated 2026-03-14 and 2.0.0 dated 2026-06-29
ardlverse-1.1.3/ardlverse/man/dot-compute_pmg_se.Rd |only ardlverse-1.1.3/ardlverse/man/dot-estimate_dfe.Rd |only ardlverse-1.1.3/ardlverse/man/dot-estimate_mg.Rd |only ardlverse-1.1.3/ardlverse/man/dot-estimate_mg_internal.Rd |only ardlverse-1.1.3/ardlverse/man/dot-estimate_pmg.Rd |only ardlverse-1.1.3/ardlverse/man/dot-prepare_ardl_data.Rd |only ardlverse-2.0.0/ardlverse/DESCRIPTION | 17 ardlverse-2.0.0/ardlverse/MD5 | 21 ardlverse-2.0.0/ardlverse/NAMESPACE | 3 ardlverse-2.0.0/ardlverse/NEWS.md |only ardlverse-2.0.0/ardlverse/R/panel_ardl.R | 1567 ++++------ ardlverse-2.0.0/ardlverse/inst |only ardlverse-2.0.0/ardlverse/man/hausman_test.Rd | 70 ardlverse-2.0.0/ardlverse/man/panel_ardl.Rd | 150 ardlverse-2.0.0/ardlverse/man/print.panel_ardl.Rd |only ardlverse-2.0.0/ardlverse/man/summary.panel_ardl.Rd |only ardlverse-2.0.0/ardlverse/tests/testthat/test-pmg-stata-parity.R |only 17 files changed, 885 insertions(+), 943 deletions(-)
Title: Columnar Query Engine for Larger-than-RAM Data
Description: A minimal columnar query engine with lazy execution on datasets
larger than RAM. Provides 'dplyr'-like verbs (filter(), select(), mutate(),
group_by(), summarise(), joins, window functions) and common aggregations
(n(), sum(), mean(), min(), max(), sd(), first(), last()) backed by a
pure C11 pull-based execution engine and a custom on-disk format ('.vtr').
Reads and writes 'GeoTIFF' (including tiled and 'BigTIFF' layouts) and a
tiled raster format ('.vec') with overview pyramids and time cubes for
larger-than-RAM raster data. Streams vector operations (spatial transforms,
point-in-polygon and nearest-feature joins including a two-sided
grid-partitioned join, select-by-location, clip, erase, dissolve,
rasterization, polygonization, and contouring) through 'sf', and runs raster
operations (zonal statistics, focal windows, terrain derivatives, resample or
reproject warp, polygon masking, map algebra, and mosaicking) in native C or
over the tiled '.vec' format, one batch or tile at a time [...truncated...]
Author: Gilles Colling [aut, cre, cph]
Maintainer: Gilles Colling <gilles.colling051@gmail.com>
Diff between vectra versions 0.7.1 dated 2026-06-11 and 0.9.1 dated 2026-06-29
DESCRIPTION | 22 +- MD5 | 129 ++++++++--- NAMESPACE | 22 ++ NEWS.md | 295 +++++++++++++++++++++++++++ R/spatial.R |only R/spatial_more.R |only R/verbs_utility.R | 54 ++++ R/windows.R | 27 ++ R/zzz.R | 1 README.md | 14 - build/vignette.rds |binary inst/AGENTS.md |only inst/doc/engine.html | 4 inst/doc/formats.html | 49 ++-- inst/doc/indexing.html | 10 inst/doc/joins.html | 4 inst/doc/large-data.html | 4 inst/doc/offload.html | 4 inst/doc/quickstart.R | 108 +++++++++ inst/doc/quickstart.Rmd | 177 +++++++++++++++- inst/doc/quickstart.html | 234 +++++++++++++++------ inst/doc/schema.html | 4 inst/doc/sdm.html | 4 inst/doc/spatial.R |only inst/doc/spatial.Rmd |only inst/doc/spatial.html |only inst/doc/streaming-spatial.R |only inst/doc/streaming-spatial.Rmd |only inst/doc/streaming-spatial.html |only inst/doc/string-ops.html | 4 man/collect_sf.Rd |only man/contours.Rd |only man/focal.Rd |only man/grid.Rd |only man/mask.Rd |only man/mosaic.Rd |only man/polygonize.Rd |only man/proximity.Rd |only man/rast_calc.Rd |only man/rasterize.Rd |only man/slice_head.Rd | 14 + man/spatial_clip.Rd |only man/spatial_dissolve.Rd |only man/spatial_filter.Rd |only man/spatial_join.Rd |only man/spatial_map.Rd |only man/spatial_overlay.Rd |only man/st_write.vectra_node.Rd |only man/terrain.Rd |only man/warp.Rd |only man/zonal.Rd |only src/builder.c | 24 ++ src/builder.h | 5 src/edt.c |only src/focal.c |only src/group_topn.c |only src/group_topn.h |only src/init.c | 69 ++++++ src/libgeos.c |only src/libgeos.h |only src/r_bridge.h | 1 src/r_bridge_core.c | 9 src/r_bridge_nodes.c | 35 +++ src/r_bridge_raster.c | 97 -------- src/rasterize.c |only src/vec_raster.c | 191 ++++++++++++++--- src/vec_raster.h | 28 ++ src/vtr_geos.c |only src/vtr_geos.h |only src/vtr_overlay.c |only src/vtr_spatial.c |only src/warp.c |only src/window.c | 81 +++++-- src/window.h | 3 tests/testthat/test-contours.R |only tests/testthat/test-focal.R |only tests/testthat/test-grouped-slice.R |only tests/testthat/test-ifelse-types.R |only tests/testthat/test-mask.R |only tests/testthat/test-mosaic.R |only tests/testthat/test-polygonize.R |only tests/testthat/test-proximity.R |only tests/testthat/test-rast-calc.R |only tests/testthat/test-rasterize.R |only tests/testthat/test-spatial-dissolve.R |only tests/testthat/test-spatial-filter-clip.R |only tests/testthat/test-spatial-join-nearest.R |only tests/testthat/test-spatial-join-partition.R |only tests/testthat/test-spatial-native.R |only tests/testthat/test-spatial-overlay.R |only tests/testthat/test-spatial.R |only tests/testthat/test-terrain.R |only tests/testthat/test-warp.R |only tests/testthat/test-zonal.R |only vignettes/quickstart.Rmd | 177 +++++++++++++++- vignettes/spatial.Rmd |only vignettes/streaming-spatial.Rmd |only 97 files changed, 1582 insertions(+), 322 deletions(-)
Title: Functions for Extracting and Merging Data in the 'teal'
Framework
Description: A standardized user interface for column selection, that
facilitates dataset merging in 'teal' framework.
Author: Dawid Kaledkowski [aut],
Dony Unardi [rev, cre],
Pawel Rucki [aut],
Mahmoud Hallal [aut],
Nikolas Burkoff [aut],
Maciej Nasinski [aut],
Konrad Pagacz [aut],
Junlue Zhao [aut],
F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Dony Unardi <unardid@gene.com>
Diff between teal.transform versions 0.7.1 dated 2025-12-03 and 0.7.2 dated 2026-06-29
DESCRIPTION | 18 +- MD5 | 25 +-- NEWS.md | 6 R/column_functions.R | 3 R/get_merge_call.R | 18 +- README.md | 14 - build/vignette.rds |binary man/Queue.Rd | 216 ++++++++++++++------------- man/data_extract_ui.Rd | 2 man/reexports.Rd | 2 man/teal.transform-package.Rd | 3 tests/testthat/test-choices_selected.R | 17 ++ tests/testthat/test-column_functions.R |only tests/testthat/test-data_extract_datanames.R | 91 +++++++++++ 14 files changed, 267 insertions(+), 148 deletions(-)
More information about teal.transform at CRAN
Permanent link
Title: Reporting Tools for 'shiny' Modules
Description: Prebuilt 'shiny' modules containing tools for the generation
of 'rmarkdown' reports, supporting reproducible research and analysis.
Author: Dawid Kaledkowski [aut] ,
Kartikeya Kirar [aut] ,
Marcin Kosinski [aut],
Maciej Nasinski [aut],
Konrad Pagacz [aut],
Mahmoud Hallal [aut],
Chendi Liao [rev],
Dony Unardi [rev, cre],
F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Dony Unardi <unardid@gene.com>
Diff between teal.reporter versions 0.6.1 dated 2026-02-20 and 0.6.2 dated 2026-06-29
DESCRIPTION | 20 MD5 | 14 NEWS.md | 4 build/vignette.rds |binary inst/doc/teal-report-class.html | 18 man/ReportCard.Rd | 674 ++++++++++++++++---------------- man/Reporter.Rd | 837 ++++++++++++++++++++-------------------- man/teal.reporter-package.Rd | 4 8 files changed, 798 insertions(+), 773 deletions(-)
Title: Dataset and Variable Picker and Merge Module for 'teal'
Applications
Description: Allows users to interactively select datasets, variables, and
values within 'teal' applications using a 'tidyselect'-style
interface. Selected picks can be merged and transformed into
analysis-ready data within 'teal' modules.
Author: Dawid Kaledkowski [aut] ,
Andre Verissimo [aut] ,
Marcin Kosinski [aut],
Lluis Revilla Sancho [aut] ,
Oriol Senan [aut] ,
Dony Unardi [rev, cre],
F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Dony Unardi <unardid@gene.com>
Diff between teal.picks versions 0.1.0 dated 2026-05-19 and 0.2.0 dated 2026-06-29
DESCRIPTION | 18 ++++++++-------- MD5 | 24 +++++++++++----------- NEWS.md | 8 +++++++ R/picks.R | 32 +++++++++++++++++++++--------- R/ui_containers.R | 8 ++++--- inst/WORDLIST | 1 inst/badge-dropdown/script.js | 6 +++++ inst/badge-dropdown/style.css | 11 ++++++++-- inst/doc/teal-picks-in-teal.html | 4 +-- inst/doc/teal-picks-standalone-shiny.html | 4 +-- man/dot-pick.Rd | 4 ++- man/picks.Rd | 4 ++- tests/testthat/test-picks.R | 10 +++++++++ 13 files changed, 92 insertions(+), 42 deletions(-)
Title: Logging Setup for the 'teal' Family of Packages
Description: Utilizing the 'logger' framework to record events within a
package, specific to 'teal' family of packages. Supports logging
namespaces, hierarchical logging, various log destinations,
vectorization, and more.
Author: Dawid Kaledkowski [aut] ,
Dony Unardi [rev, cre],
Konrad Pagacz [aut],
F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Dony Unardi <unardid@gene.com>
Diff between teal.logger versions 0.4.1 dated 2025-12-02 and 0.4.2 dated 2026-06-29
DESCRIPTION | 20 ++++++++++++-------- MD5 | 18 +++++++++--------- NEWS.md | 5 +++++ README.md | 14 -------------- build/vignette.rds |binary inst/WORDLIST | 1 + inst/doc/teal-logger.Rmd | 2 +- inst/doc/teal-logger.html | 2 +- man/teal.logger-package.Rd | 3 ++- vignettes/teal-logger.Rmd | 2 +- 10 files changed, 32 insertions(+), 35 deletions(-)
Title: Code Storage and Execution Class for 'teal' Applications
Description: Introduction of 'qenv' S4 class, that facilitates code
execution and reproducibility in 'teal' applications.
Author: Dawid Kaledkowski [aut],
Aleksander Chlebowski [aut],
Marcin Kosinski [aut],
Pawel Rucki [aut],
Nikolas Burkoff [aut],
Mahmoud Hallal [aut],
Maciej Nasinski [aut],
Konrad Pagacz [aut],
Junlue Zhao [aut],
Chendi Liao [rev],
Dony Unardi [rev, cre],
F. [...truncated...]
Maintainer: Dony Unardi <unardid@gene.com>
Diff between teal.code versions 0.7.1 dated 2026-01-20 and 0.7.2 dated 2026-06-29
teal.code-0.7.1/teal.code/tests/testthat/Rplots.pdf |only teal.code-0.7.2/teal.code/DESCRIPTION | 20 teal.code-0.7.2/teal.code/MD5 | 143 teal.code-0.7.2/teal.code/NAMESPACE | 56 teal.code-0.7.2/teal.code/NEWS.md | 8 teal.code-0.7.2/teal.code/R/qenv-c.R | 212 - teal.code-0.7.2/teal.code/R/qenv-class.R | 130 teal.code-0.7.2/teal.code/R/qenv-concat.R | 98 teal.code-0.7.2/teal.code/R/qenv-constructor.R | 78 teal.code-0.7.2/teal.code/R/qenv-errors.R | 20 teal.code-0.7.2/teal.code/R/qenv-eval_code.R | 229 - teal.code-0.7.2/teal.code/R/qenv-extract.R | 106 teal.code-0.7.2/teal.code/R/qenv-get_code.R | 274 - teal.code-0.7.2/teal.code/R/qenv-get_env.R | 54 teal.code-0.7.2/teal.code/R/qenv-get_messages.r | 80 teal.code-0.7.2/teal.code/R/qenv-get_outputs.R | 62 teal.code-0.7.2/teal.code/R/qenv-get_var.R | 80 teal.code-0.7.2/teal.code/R/qenv-get_warnings.R | 80 teal.code-0.7.2/teal.code/R/qenv-join.R | 26 teal.code-0.7.2/teal.code/R/qenv-length.R | 10 teal.code-0.7.2/teal.code/R/qenv-show.R | 102 teal.code-0.7.2/teal.code/R/qenv-within.R | 142 teal.code-0.7.2/teal.code/R/teal.code-package.R | 22 teal.code-0.7.2/teal.code/R/utils-get_code_dependency.R | 1215 +++--- teal.code-0.7.2/teal.code/R/utils.R | 200 - teal.code-0.7.2/teal.code/README.md | 216 - teal.code-0.7.2/teal.code/build/vignette.rds |binary teal.code-0.7.2/teal.code/inst/WORDLIST | 10 teal.code-0.7.2/teal.code/inst/doc/qenv.R | 274 - teal.code-0.7.2/teal.code/inst/doc/qenv.Rmd | 438 +- teal.code-0.7.2/teal.code/inst/doc/qenv.html | 1292 +++--- teal.code-0.7.2/teal.code/inst/doc/teal-code.Rmd | 40 teal.code-0.7.2/teal.code/inst/doc/teal-code.html | 558 +- teal.code-0.7.2/teal.code/inst/pkgdown/_pkgdown.yml | 20 teal.code-0.7.2/teal.code/inst/pkgdown/templates/footer.html | 6 teal.code-0.7.2/teal.code/man/concat.Rd | 74 teal.code-0.7.2/teal.code/man/dev_suppress.Rd | 56 teal.code-0.7.2/teal.code/man/dot-check_joinable.Rd | 42 teal.code-0.7.2/teal.code/man/eval_code.Rd | 82 teal.code-0.7.2/teal.code/man/get_code.Rd | 226 - teal.code-0.7.2/teal.code/man/get_code_dependency.Rd | 74 teal.code-0.7.2/teal.code/man/get_env.Rd | 56 teal.code-0.7.2/teal.code/man/get_messages.Rd | 60 teal.code-0.7.2/teal.code/man/get_outputs.Rd | 66 teal.code-0.7.2/teal.code/man/get_var.Rd | 46 teal.code-0.7.2/teal.code/man/get_warn_message_util.Rd | 40 teal.code-0.7.2/teal.code/man/get_warnings.Rd | 60 teal.code-0.7.2/teal.code/man/join.Rd | 66 teal.code-0.7.2/teal.code/man/lang2calls.Rd | 56 teal.code-0.7.2/teal.code/man/qenv-class.Rd | 66 teal.code-0.7.2/teal.code/man/qenv.Rd | 86 teal.code-0.7.2/teal.code/man/show-qenv-method.Rd | 48 teal.code-0.7.2/teal.code/man/subset-qenv.Rd | 54 teal.code-0.7.2/teal.code/man/teal.code-package.Rd | 90 teal.code-0.7.2/teal.code/man/within.qenv.Rd | 134 teal.code-0.7.2/teal.code/tests/testthat.R | 6 teal.code-0.7.2/teal.code/tests/testthat/setup-options.R | 40 teal.code-0.7.2/teal.code/tests/testthat/test-get_outputs.R | 228 - teal.code-0.7.2/teal.code/tests/testthat/test-qenv-class.R | 40 teal.code-0.7.2/teal.code/tests/testthat/test-qenv_concat.R | 186 teal.code-0.7.2/teal.code/tests/testthat/test-qenv_constructor.R | 134 teal.code-0.7.2/teal.code/tests/testthat/test-qenv_eval_code.R | 358 - teal.code-0.7.2/teal.code/tests/testthat/test-qenv_extract.R | 186 teal.code-0.7.2/teal.code/tests/testthat/test-qenv_get_code.R | 1954 +++++----- teal.code-0.7.2/teal.code/tests/testthat/test-qenv_get_messages.R | 152 teal.code-0.7.2/teal.code/tests/testthat/test-qenv_get_var.R | 96 teal.code-0.7.2/teal.code/tests/testthat/test-qenv_get_warnings.R | 152 teal.code-0.7.2/teal.code/tests/testthat/test-qenv_join.R | 346 - teal.code-0.7.2/teal.code/tests/testthat/test-qenv_within.R | 324 - teal.code-0.7.2/teal.code/tests/testthat/test-utils-get_code_dependency.R | 494 +- teal.code-0.7.2/teal.code/tests/testthat/test-utils.R | 122 teal.code-0.7.2/teal.code/vignettes/qenv.Rmd | 438 +- teal.code-0.7.2/teal.code/vignettes/teal-code.Rmd | 40 73 files changed, 6544 insertions(+), 6535 deletions(-)
Title: Coarse-to-Fine Spatial Modeling
Description: Provides functions for coarse-to-fine spatial modeling (CFSM), enabling fast spatial prediction, regression, and uncertainty quantification. This method is suitable for moderate to large samples. For methodological details, see Murakami et al. (2026) <doi:10.1111/gean.70034> and related works on its generalized-linear <doi:10.48550/arXiv.2605.01157> and downscaling extensions.
Author: Daisuke Murakami [aut, cre],
Alexis Comber [aut],
Takahiro Yoshida [aut],
Narumasa Tsutsumida [aut],
Chris Brunsdon [aut],
Tomoki Nakaya [aut]
Maintainer: Daisuke Murakami <dmuraka@ism.ac.jp>
Diff between spCF versions 0.1.1 dated 2026-05-01 and 0.1.2 dated 2026-06-29
spCF-0.1.1/spCF/inst/doc/spCF_intro.R |only spCF-0.1.1/spCF/inst/doc/spCF_intro.Rmd |only spCF-0.1.1/spCF/inst/doc/spCF_intro.html |only spCF-0.1.1/spCF/vignettes/spCF_intro.Rmd |only spCF-0.1.2/spCF/DESCRIPTION | 10 - spCF-0.1.2/spCF/MD5 | 60 +++--- spCF-0.1.2/spCF/NAMESPACE | 7 spCF-0.1.2/spCF/R/RcppExports.R | 4 spCF-0.1.2/spCF/R/cf_downscale.R |only spCF-0.1.2/spCF/R/cf_downscale_hv.R |only spCF-0.1.2/spCF/R/cf_glm.R | 158 +++++++++++++---- spCF-0.1.2/spCF/R/cf_glm_hv.R | 49 ++--- spCF-0.1.2/spCF/R/cf_lm.R | 222 +++++++++++++++++++----- spCF-0.1.2/spCF/R/cf_lm_hv.R | 60 ++++-- spCF-0.1.2/spCF/R/internal_utils_ds.R |only spCF-0.1.2/spCF/R/internal_utils_glm.R | 67 ++++++- spCF-0.1.2/spCF/R/internal_utils_lm.R | 168 +++++++++++++++++- spCF-0.1.2/spCF/build/vignette.rds |binary spCF-0.1.2/spCF/inst/doc/spCF_downscale.R |only spCF-0.1.2/spCF/inst/doc/spCF_downscale.Rmd |only spCF-0.1.2/spCF/inst/doc/spCF_downscale.html |only spCF-0.1.2/spCF/inst/doc/spCF_glm.R | 4 spCF-0.1.2/spCF/inst/doc/spCF_glm.Rmd | 4 spCF-0.1.2/spCF/inst/doc/spCF_glm.html | 249 +++++++++++++++------------ spCF-0.1.2/spCF/inst/doc/spCF_lm.R |only spCF-0.1.2/spCF/inst/doc/spCF_lm.Rmd |only spCF-0.1.2/spCF/inst/doc/spCF_lm.html |only spCF-0.1.2/spCF/man/cf_downscale.Rd |only spCF-0.1.2/spCF/man/cf_downscale_hv.Rd |only spCF-0.1.2/spCF/man/cf_glm.Rd | 45 +++- spCF-0.1.2/spCF/man/cf_glm_hv.Rd | 45 ++-- spCF-0.1.2/spCF/man/cf_lm.Rd | 54 +++-- spCF-0.1.2/spCF/man/cf_lm_hv.Rd | 42 ++-- spCF-0.1.2/spCF/src/RcppExports.cpp | 29 +++ spCF-0.1.2/spCF/src/lwr_chunk.cpp | 4 spCF-0.1.2/spCF/src/lwr_chunk_glm.cpp | 4 spCF-0.1.2/spCF/src/lwr_ds_chunk.cpp |only spCF-0.1.2/spCF/vignettes/spCF_downscale.Rmd |only spCF-0.1.2/spCF/vignettes/spCF_glm.Rmd | 4 spCF-0.1.2/spCF/vignettes/spCF_lm.Rmd |only 40 files changed, 931 insertions(+), 358 deletions(-)
Title: Enrichment Analysis Utilizing Active Subnetworks
Description: Enrichment analysis enables researchers to uncover mechanisms
underlying a phenotype. However, conventional methods for enrichment
analysis do not take into account protein-protein interaction information,
resulting in incomplete conclusions. 'pathfindR' is a tool for enrichment
analysis utilizing active subnetworks. The main function identifies active
subnetworks in a protein-protein interaction network using a user-provided
list of genes and associated p values. It then performs enrichment analyses
on the identified subnetworks, identifying enriched terms (i.e. pathways or,
more broadly, gene sets) that possibly underlie the phenotype of interest.
'pathfindR' also offers functionalities to cluster the enriched terms and
identify representative terms in each cluster, to score the enriched terms
per sample and to visualize analysis results. The enrichment, clustering and
other methods implemented in 'pathfindR' are described in detail in
Ulgen E, Ozisik O, Sezerman OU. 2019. 'pathfindR [...truncated...]
Author: Ege Ulgen [cre, cph] ,
Ozan Ozisik [aut]
Maintainer: Ege Ulgen <egeulgen@gmail.com>
Diff between pathfindR versions 3.0.0 dated 2026-06-22 and 3.0.1 dated 2026-06-29
DESCRIPTION | 6 MD5 | 61 ++-- NEWS.md | 12 R/RcppExports.R | 4 R/visualize_term_gene_graph.R | 2 inst/doc/comparing_results.html | 4 inst/doc/intro_vignette.html | 4 inst/doc/non_hs_analysis.html | 4 inst/doc/obtain_data.html | 4 inst/doc/visualization_vignette.html | 6 src/RcppExports.cpp | 14 - src/greedy_search.cpp | 4 src/java_compat.h | 23 + src/score_calculation_utils.cpp | 4 src/subnetwork_scoring.cpp | 40 --- tests/testthat-cpp.R |only tests/testthat/test-active-snw-seach-score.R |only tests/testthat/test-active-snw-search-ga.R |only tests/testthat/test-active-snw-search-greedy.R |only tests/testthat/test-active-snw-search-main.R |only tests/testthat/test-active-snw-search-sa.R |only tests/testthat/test-active-snw-search-utils.R |only tests/testthat/test-clustering.R | 10 tests/testthat/test-cpp-greedy-search.R |only tests/testthat/test-cpp-score-calculation-utils.R |only tests/testthat/test-data_generation.R | 22 + tests/testthat/test-search-and-enrichment-wrapper.R | 24 + tests/testthat/test-util-fetch-gene-sets.R | 2 tests/testthat/test-util-input-testing-processing.R | 13 + tests/testthat/test-util-visualization.R | 250 ++++++++++++++++---- tests/testthat/test-visualize-active-subnetworks.R | 2 tests/testthat/test-visualize-enrichment-chart.R | 14 + tests/testthat/test-visualize-term-gene-graph.R | 31 +- tests/testthat/test-visualize-term-gene-heatmap.R | 1 tests/testthat/test-visualize-terms.R | 14 - tests/testthat/test-visualize-upset-plot.R | 1 36 files changed, 400 insertions(+), 176 deletions(-)
Title: Plotting Ultrasound Tongue Traces
Description: Plots traced ultrasound tongue imaging data according to a polar coordinate system.
There is currently support for plotting means and standard deviations of each category's trace;
Smoothing Splines Analysis of Variance (SSANOVA) could be implemented as well. The origin of the
polar coordinates may be defined manually or automatically determined based on different
algorithms.
Points for each category can be split into two groups (anterior and posterior) at the point of
maximum curvature of each trace. User can specify rays to intersect various parts of the
tongue; intersections along these rays serve as input for a pairwise t-test to measure
significant contrasts between segments.
Currently 'ultrapolaRplot' supports ultrasound tongue imaging trace data from 'UltraTrace'
(<https://github.com/SwatPhonLab/UltraTrace>). 'UltraTrace' is capable of importing data from
Articulate Instruments AAA.
'read_textgrid.R' is required for opening TextGrids to determine category and alignment
inf [...truncated...]
Author: Yana Outkin [aut, cre],
Jonathan Washington [aut]
Maintainer: Yana Outkin <youtkin3@gatech.edu>
Diff between ultrapolaRplot versions 0.2.1 dated 2026-04-23 and 0.2.2 dated 2026-06-29
DESCRIPTION | 10 +++++----- MD5 | 4 ++-- R/ultrapolaRplot.R | 8 ++++---- 3 files changed, 11 insertions(+), 11 deletions(-)
More information about ultrapolaRplot at CRAN
Permanent link
Title: Dynamic Multi-Species Size Spectrum Modelling
Description: A set of classes and methods to set up and run multi-species, trait
based and community size spectrum ecological models, focused on the marine
environment.
Author: Gustav Delius [cre, aut, cph] ,
Finlay Scott [aut, cph],
Julia Blanchard [aut, cph] ,
Ken Andersen [aut, cph] ,
Richard Southwell [ctb, cph]
Maintainer: Gustav Delius <gustav.delius@york.ac.uk>
Diff between mizer versions 3.0.0 dated 2026-06-08 and 3.1.0 dated 2026-06-29
mizer-3.0.0/mizer/man/str.MizerParams.Rd |only mizer-3.0.0/mizer/man/str.MizerSim.Rd |only mizer-3.0.0/mizer/man/summary.MizerParams.Rd |only mizer-3.0.0/mizer/man/summary.MizerSim.Rd |only mizer-3.0.0/mizer/tests/testthat/Rplots.pdf |only mizer-3.1.0/mizer/DESCRIPTION | 41 - mizer-3.1.0/mizer/MD5 | 342 +++++----- mizer-3.1.0/mizer/NAMESPACE | 35 + mizer-3.1.0/mizer/NEWS.md | 221 ++++++ mizer-3.1.0/mizer/R/ArrayResourceBySize-class.R |only mizer-3.1.0/mizer/R/ArraySpeciesBySize-class.R | 55 + mizer-3.1.0/mizer/R/ArrayTimeBySpeciesBySize-class.R | 53 + mizer-3.1.0/mizer/R/MizerParams-class.R | 57 + mizer-3.1.0/mizer/R/MizerSim-class.R | 7 mizer-3.1.0/mizer/R/animateSpectra.R | 8 mizer-3.1.0/mizer/R/background.R | 8 mizer-3.1.0/mizer/R/data.R | 10 mizer-3.1.0/mizer/R/diffusion.R | 101 ++ mizer-3.1.0/mizer/R/generic_methods.R | 15 mizer-3.1.0/mizer/R/getRequiredRDD.R | 17 mizer-3.1.0/mizer/R/get_initial_n.R | 4 mizer-3.1.0/mizer/R/helpers.R | 203 +++++ mizer-3.1.0/mizer/R/indicator_functions.R | 12 mizer-3.1.0/mizer/R/manipulate_species.R | 5 mizer-3.1.0/mizer/R/mizer-package.R | 2 mizer-3.1.0/mizer/R/newMultispeciesParams.R | 44 + mizer-3.1.0/mizer/R/newSingleSpeciesParams.R | 20 mizer-3.1.0/mizer/R/plots.R | 129 ++- mizer-3.1.0/mizer/R/project.R | 204 ++++- mizer-3.1.0/mizer/R/project_n.R | 182 ++++- mizer-3.1.0/mizer/R/rate_functions.R | 235 +++++- mizer-3.1.0/mizer/R/registerExtensions.R | 165 ++++ mizer-3.1.0/mizer/R/reproduction.R | 6 mizer-3.1.0/mizer/R/saveParams.R | 9 mizer-3.1.0/mizer/R/second_order_w.R |only mizer-3.1.0/mizer/R/setBevertonHolt.R | 2 mizer-3.1.0/mizer/R/setExtDiffusion.R | 22 mizer-3.1.0/mizer/R/setExtMort.R | 56 + mizer-3.1.0/mizer/R/setFishing.R | 50 + mizer-3.1.0/mizer/R/setInitialValues.R | 7 mizer-3.1.0/mizer/R/setPredKernel.R | 141 +++- mizer-3.1.0/mizer/R/setReproduction.R | 31 mizer-3.1.0/mizer/R/setResource.R | 40 - mizer-3.1.0/mizer/R/species_params.R | 42 - mizer-3.1.0/mizer/R/steady.R | 80 +- mizer-3.1.0/mizer/R/summary_methods.R | 333 +++++++-- mizer-3.1.0/mizer/R/transport.R | 308 ++++++--- mizer-3.1.0/mizer/R/upgrade.R | 176 ++++- mizer-3.1.0/mizer/R/validSpeciesParams.R | 72 +- mizer-3.1.0/mizer/R/wrapper_functions.R | 24 mizer-3.1.0/mizer/README.md | 22 mizer-3.1.0/mizer/data/NS_params.rda |binary mizer-3.1.0/mizer/data/NS_sim.rda |binary mizer-3.1.0/mizer/inst/WORDLIST | 9 mizer-3.1.0/mizer/inst/doc/mizer_vignette.Rmd | 2 mizer-3.1.0/mizer/inst/doc/mizer_vignette.html | 7 mizer-3.1.0/mizer/man/ArrayResourceBySize.Rd |only mizer-3.1.0/mizer/man/ArraySpeciesBySize.Rd | 14 mizer-3.1.0/mizer/man/ArrayTimeByResourceBySize.Rd |only mizer-3.1.0/mizer/man/ArrayTimeBySpeciesBySize.Rd | 14 mizer-3.1.0/mizer/man/MizerParams-class.Rd | 29 mizer-3.1.0/mizer/man/NOther.Rd | 1 mizer-3.1.0/mizer/man/NS_species_params.Rd | 5 mizer-3.1.0/mizer/man/NS_species_params_gears.Rd | 5 mizer-3.1.0/mizer/man/apply_wlim.Rd |only mizer-3.1.0/mizer/man/as.data.frame.Rd | 2 mizer-3.1.0/mizer/man/bin_average_summary_weight.Rd |only mizer-3.1.0/mizer/man/bin_average_weight.Rd |only mizer-3.1.0/mizer/man/bin_midpoints.Rd |only mizer-3.1.0/mizer/man/calc_selectivity.Rd | 17 mizer-3.1.0/mizer/man/clearExtensionChain.Rd | 1 mizer-3.1.0/mizer/man/coerceToExtensionClass.Rd | 1 mizer-3.1.0/mizer/man/completeSpeciesParams.Rd | 21 mizer-3.1.0/mizer/man/extensionRequirements.Rd |only mizer-3.1.0/mizer/man/extensionVersion.Rd |only mizer-3.1.0/mizer/man/extensionVersions.Rd |only mizer-3.1.0/mizer/man/extension_needs_upgrading.Rd |only mizer-3.1.0/mizer/man/figures/Beverton-Holt-plot-1.png |binary mizer-3.1.0/mizer/man/figures/unnamed-chunk-4-1.png |binary mizer-3.1.0/mizer/man/flux_from_rates.Rd | 6 mizer-3.1.0/mizer/man/getDiet.Rd | 58 + mizer-3.1.0/mizer/man/getDiffusion.Rd | 50 + mizer-3.1.0/mizer/man/getEGrowth.Rd | 1 mizer-3.1.0/mizer/man/getERepro.Rd | 1 mizer-3.1.0/mizer/man/getEReproAndGrowth.Rd | 1 mizer-3.1.0/mizer/man/getESpawning.Rd | 1 mizer-3.1.0/mizer/man/getEncounter.Rd | 1 mizer-3.1.0/mizer/man/getFMort.Rd | 1 mizer-3.1.0/mizer/man/getFMortGear.Rd | 1 mizer-3.1.0/mizer/man/getFeedingLevel.Rd | 1 mizer-3.1.0/mizer/man/getFlux.Rd | 1 mizer-3.1.0/mizer/man/getFluxGradient.Rd |only mizer-3.1.0/mizer/man/getM2.Rd | 1 mizer-3.1.0/mizer/man/getM2Background.Rd | 1 mizer-3.1.0/mizer/man/getMeanMaxWeight.Rd | 2 mizer-3.1.0/mizer/man/getMort.Rd | 1 mizer-3.1.0/mizer/man/getPredMort.Rd | 1 mizer-3.1.0/mizer/man/getPredRate.Rd | 1 mizer-3.1.0/mizer/man/getRDD.Rd | 1 mizer-3.1.0/mizer/man/getRDI.Rd | 1 mizer-3.1.0/mizer/man/getRates.Rd | 1 mizer-3.1.0/mizer/man/getRegisteredExtensions.Rd | 1 mizer-3.1.0/mizer/man/getRequiredRDD.Rd | 4 mizer-3.1.0/mizer/man/getResourceMort.Rd | 1 mizer-3.1.0/mizer/man/getTrophicLevel.Rd | 29 mizer-3.1.0/mizer/man/getTrophicLevelBySpecies.Rd | 13 mizer-3.1.0/mizer/man/getZ.Rd | 1 mizer-3.1.0/mizer/man/get_ArrayResourceBySize_w.Rd |only mizer-3.1.0/mizer/man/get_ArraySpeciesBySize_w.Rd | 8 mizer-3.1.0/mizer/man/get_ArrayTimeBySpeciesBySize_w.Rd |only mizer-3.1.0/mizer/man/get_species_size_rate_from_sim.Rd | 3 mizer-3.1.0/mizer/man/get_steady_state_n.Rd | 30 mizer-3.1.0/mizer/man/initialNOther-set.Rd | 1 mizer-3.1.0/mizer/man/is.ArrayResourceBySize.Rd |only mizer-3.1.0/mizer/man/is.ArrayTimeByResourceBySize.Rd |only mizer-3.1.0/mizer/man/makeExtensions.Rd |only mizer-3.1.0/mizer/man/mizer_needs_upgrading.Rd |only mizer-3.1.0/mizer/man/newCommunityParams.Rd | 14 mizer-3.1.0/mizer/man/newMultispeciesParams.Rd | 59 + mizer-3.1.0/mizer/man/newSingleSpeciesParams.Rd | 8 mizer-3.1.0/mizer/man/newTraitParams.Rd | 8 mizer-3.1.0/mizer/man/parsePlotLog.Rd |only mizer-3.1.0/mizer/man/plot.Rd | 12 mizer-3.1.0/mizer/man/plotDiet.Rd | 10 mizer-3.1.0/mizer/man/plotGrowthCurves.Rd | 13 mizer-3.1.0/mizer/man/plotHover.Rd | 11 mizer-3.1.0/mizer/man/plotYield.Rd | 2 mizer-3.1.0/mizer/man/power_law_bin_average.Rd |only mizer-3.1.0/mizer/man/project.Rd | 61 - mizer-3.1.0/mizer/man/projectToSteady.Rd | 2 mizer-3.1.0/mizer/man/project_n.Rd | 20 mizer-3.1.0/mizer/man/project_n_2.Rd | 10 mizer-3.1.0/mizer/man/project_n_tr_bdf2.Rd |only mizer-3.1.0/mizer/man/project_simple.Rd | 2 mizer-3.1.0/mizer/man/recordExtension.Rd |only mizer-3.1.0/mizer/man/registerExtension.Rd | 1 mizer-3.1.0/mizer/man/registerExtensions.Rd | 1 mizer-3.1.0/mizer/man/removeBackgroundSpecies.Rd | 10 mizer-3.1.0/mizer/man/resolve_second_order_w.Rd |only mizer-3.1.0/mizer/man/resource_power_law.Rd |only mizer-3.1.0/mizer/man/runExtensionUpgrades.Rd |only mizer-3.1.0/mizer/man/second_order_w.Rd |only mizer-3.1.0/mizer/man/setComponent.Rd | 1 mizer-3.1.0/mizer/man/setExtDiffusion.Rd | 2 mizer-3.1.0/mizer/man/setExtMort.Rd | 16 mizer-3.1.0/mizer/man/setParams.Rd | 36 - mizer-3.1.0/mizer/man/setPredKernel.Rd | 20 mizer-3.1.0/mizer/man/setRateFunction.Rd | 1 mizer-3.1.0/mizer/man/setReproduction.Rd | 20 mizer-3.1.0/mizer/man/sim_size_rate.Rd | 1 mizer-3.1.0/mizer/man/sim_species_rate.Rd | 17 mizer-3.1.0/mizer/man/species_params.Rd | 33 mizer-3.1.0/mizer/man/steady.Rd | 2 mizer-3.1.0/mizer/man/str.Rd | 6 mizer-3.1.0/mizer/man/summary.Rd | 4 mizer-3.1.0/mizer/man/upgrade.MizerParams.Rd |only mizer-3.1.0/mizer/man/upgrade.MizerSim.Rd |only mizer-3.1.0/mizer/man/upgradeParams.Rd | 15 mizer-3.1.0/mizer/man/upgradeSim.Rd | 10 mizer-3.1.0/mizer/man/validSpeciesParams.Rd | 21 mizer-3.1.0/mizer/man/validate_second_order_w.Rd |only mizer-3.1.0/mizer/tests/testthat.R | 15 mizer-3.1.0/mizer/tests/testthat/_snaps/backwards_compatibility.md | 6 mizer-3.1.0/mizer/tests/testthat/_snaps/project_methods.md | 45 + mizer-3.1.0/mizer/tests/testthat/test-ArraySpeciesBySize.R | 57 + mizer-3.1.0/mizer/tests/testthat/test-ArrayTimeBySpeciesBySize.R | 31 mizer-3.1.0/mizer/tests/testthat/test-diffusion.R | 69 ++ mizer-3.1.0/mizer/tests/testthat/test-extension-versions.R |only mizer-3.1.0/mizer/tests/testthat/test-extension.R | 54 + mizer-3.1.0/mizer/tests/testthat/test-flux_limiter.R |only mizer-3.1.0/mizer/tests/testthat/test-helpers.R | 129 +++ mizer-3.1.0/mizer/tests/testthat/test-idxFinalT.R | 2 mizer-3.1.0/mizer/tests/testthat/test-manipulate_species.R | 2 mizer-3.1.0/mizer/tests/testthat/test-plots.R | 158 ++++ mizer-3.1.0/mizer/tests/testthat/test-project_methods.R | 12 mizer-3.1.0/mizer/tests/testthat/test-project_simple.R | 3 mizer-3.1.0/mizer/tests/testthat/test-reproduction.R | 33 mizer-3.1.0/mizer/tests/testthat/test-resource_logistic.R | 2 mizer-3.1.0/mizer/tests/testthat/test-resource_semichemostat.R | 2 mizer-3.1.0/mizer/tests/testthat/test-second_order_summary.R |only mizer-3.1.0/mizer/tests/testthat/test-second_order_w.R |only mizer-3.1.0/mizer/tests/testthat/test-setExtDiffusion.R | 27 mizer-3.1.0/mizer/tests/testthat/test-setExtMort.R | 90 ++ mizer-3.1.0/mizer/tests/testthat/test-setFishing.R | 76 ++ mizer-3.1.0/mizer/tests/testthat/test-setInitialValues.R | 8 mizer-3.1.0/mizer/tests/testthat/test-setPredKernel.R | 160 ++++ mizer-3.1.0/mizer/tests/testthat/test-setResource.R | 89 ++ mizer-3.1.0/mizer/tests/testthat/test-summary_methods.R | 78 ++ mizer-3.1.0/mizer/tests/testthat/test-tr_bdf2.R |only mizer-3.1.0/mizer/tests/testthat/test-upgrade.R | 22 mizer-3.1.0/mizer/tests/testthat/test-validSpeciesParams.R | 38 + mizer-3.1.0/mizer/vignettes/mizer_vignette.Rmd | 2 192 files changed, 4683 insertions(+), 924 deletions(-)
Title: Many Ways to Make, Manipulate, and Modify Myriad Networks
Description: Many tools for making, manipulating, and modifying many different types of networks.
All functions operate with matrices, edge lists, and 'igraph', 'network', and 'tidygraph' objects,
on directed, multiplex, multimodal, signed, and other networks.
The package includes functions for importing and exporting, creating and generating networks,
modifying networks and node and tie attributes,
and describing networks with sensible defaults.
Author: James Hollway [cre, aut, ctb] ,
Henrique Sposito [ctb] ,
Christian Steglich [ctb],
Alvaro Uzaheta [ctb]
Maintainer: James Hollway <james.hollway@graduateinstitute.ch>
Diff between manynet versions 2.1.3 dated 2026-06-24 and 2.1.4 dated 2026-06-29
manynet-2.1.3/manynet/tests/testthat/test-class_stocnet.R |only manynet-2.1.4/manynet/DESCRIPTION | 6 manynet-2.1.4/manynet/MD5 | 36 - manynet-2.1.4/manynet/NAMESPACE | 24 manynet-2.1.4/manynet/NEWS.md | 28 + manynet-2.1.4/manynet/R/class_validate.R | 1 manynet-2.1.4/manynet/R/coerce_graph.R | 377 ++++++-------- manynet-2.1.4/manynet/R/coerce_list.R | 4 manynet-2.1.4/manynet/R/manip_info.R | 4 manynet-2.1.4/manynet/R/mark_format.R | 16 manynet-2.1.4/manynet/R/measure_attributes.R | 10 manynet-2.1.4/manynet/R/measure_properties.R | 45 + manynet-2.1.4/manynet/R/modif_levels.R | 13 manynet-2.1.4/manynet/R/modif_project.R | 71 ++ manynet-2.1.4/manynet/man/coerce_graph.Rd | 42 - manynet-2.1.4/manynet/man/mark_format_node.Rd | 4 manynet-2.1.4/manynet/man/measure_missingness.Rd |only manynet-2.1.4/manynet/man/modif_levels.Rd | 13 manynet-2.1.4/manynet/man/modif_project.Rd | 26 manynet-2.1.4/manynet/tests/testthat/test-mark_is.R | 2 20 files changed, 467 insertions(+), 255 deletions(-)
Title: k-Prototypes Clustering for Mixed Variable-Type Data
Description: Functions to perform k-prototypes partitioning clustering for
mixed variable-type data according to Z.Huang (1998): Extensions to the k-Means
Algorithm for Clustering Large Data Sets with Categorical Variables, Data Mining
and Knowledge Discovery 2, 283-304 and G.Szepannek et al. (2025): Clustering
Large Mixed-Type Data with Ordinal Variables, Adv Data Anal Classif 19, 749–767.
Author: Gero Szepannek [aut, cre],
Rabea Aschenbruck [aut]
Maintainer: Gero Szepannek <gero.szepannek@web.de>
Diff between clustMixType versions 0.5-1 dated 2026-05-30 and 0.5-2 dated 2026-06-29
clustMixType-0.5-1/clustMixType/R/clustVarImp.R |only clustMixType-0.5-2/clustMixType/DESCRIPTION | 10 +- clustMixType-0.5-2/clustMixType/MD5 | 21 ++-- clustMixType-0.5-2/clustMixType/NAMESPACE | 2 clustMixType-0.5-2/clustMixType/NEWS | 47 +++++++--- clustMixType-0.5-2/clustMixType/R/importance.R |only clustMixType-0.5-2/clustMixType/R/kprototypes.R | 27 ++++- clustMixType-0.5-2/clustMixType/R/stability_kproto.R | 7 + clustMixType-0.5-2/clustMixType/man/importance_kproto.Rd |only clustMixType-0.5-2/clustMixType/man/kproto.Rd | 22 +++- clustMixType-0.5-2/clustMixType/man/stability_kproto.Rd | 7 + clustMixType-0.5-2/clustMixType/tests/testthat/test_basics.R | 8 + clustMixType-0.5-2/clustMixType/tests/testthat/test_clustervalidation.R | 1 13 files changed, 108 insertions(+), 44 deletions(-)
Title: Estimating Aboveground Biomass and Its Uncertainty in Tropical
Forests
Description: Contains functions for estimating above-ground biomass/carbon and its uncertainty in tropical forests. These functions allow to (1) retrieve and correct taxonomy, (2) estimate wood density and its uncertainty, (3) build height-diameter models, (4) manage tree and plot coordinates, (5) estimate above-ground biomass/carbon at stand level with associated uncertainty. To cite ‘BIOMASS’, please use citation(‘BIOMASS’). For more information, see Réjou-Méchain et al. (2017) <doi:10.1111/2041-210X.12753>.
Author: Dominique Lamonica [aut, cre],
Maxime Rejou-Mechain [aut, dtc],
Arthur Bailly [aut],
Guillaume Cornu [aut] ,
John Godlee [ctb],
Fabian Fischer [ctb],
Jerome Chave [ctb],
Arthur Pere [aut],
Ariane Tanguy [aut],
Camille Piponiot [aut],
Bruno Herault [a [...truncated...]
Maintainer: Dominique Lamonica <dominique.lamonica@ird.fr>
Diff between BIOMASS versions 2.2.7 dated 2026-03-11 and 2.2.7-1 dated 2026-06-29
BIOMASS-2.2.7-1/BIOMASS/DESCRIPTION | 12 BIOMASS-2.2.7-1/BIOMASS/MD5 | 29 BIOMASS-2.2.7-1/BIOMASS/NAMESPACE | 1 BIOMASS-2.2.7-1/BIOMASS/NEWS | 4 BIOMASS-2.2.7-1/BIOMASS/R/check_plot_coord.R | 24 BIOMASS-2.2.7-1/BIOMASS/R/divide_plot.R | 3 BIOMASS-2.2.7-1/BIOMASS/R/subplot_summary.R | 26 BIOMASS-2.2.7-1/BIOMASS/build/partial.rdb |binary BIOMASS-2.2.7-1/BIOMASS/build/vignette.rds |binary BIOMASS-2.2.7-1/BIOMASS/inst/doc/Vignette_BIOMASS.html | 14 BIOMASS-2.2.7-1/BIOMASS/inst/doc/Vignette_spatialized_trees_and_forest_stand_metrics.html | 16 BIOMASS-2.2.7-1/BIOMASS/man/BIOMASS-package.Rd | 1 BIOMASS-2.2.7-1/BIOMASS/man/check_plot_coord.Rd | 2 BIOMASS-2.2.7-1/BIOMASS/man/subplot_summary.Rd | 7 BIOMASS-2.2.7-1/BIOMASS/tests/testthat/test-subplot_summary.R | 363 +++------- BIOMASS-2.2.7/BIOMASS/vignettes/saved_data/generate_data_for_predictmap_vignette.R |only 16 files changed, 226 insertions(+), 276 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-05-12 0.3.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-07-21 0.1.2
2024-07-23 0.1.1
2022-09-08 0.1.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-05-11 2.0.5
2026-02-08 2.0.0
2025-09-02 1.3.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-11-10 1.1.6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-09-11 0.1.4
2024-11-30 0.1.3
2024-11-08 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2022-11-03 3.2.5
2022-02-22 3.2.4
2022-01-27 3.2.3
2021-10-26 3.2.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-02-05 0.1.0
2025-01-30 0.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2019-11-14 1.1.0
2019-03-13 1.0.1
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-09-25 0.1.3
2025-08-28 0.1.2
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2021-04-17 0.3-4
2019-03-10 0.3-3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2024-11-01 1.0-8
2024-01-09 1.0-7
2023-07-16 1.0-6
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2020-12-01 1.0.3