Title: Functions and Datasets for Math Used in School
Description: Contains functions and datasets for math taught in school. A main focus is set to prime-calculation.
Author: Joerg grosse Schlarmann [aut, cre]
Maintainer: Joerg grosse Schlarmann <schlarmann@produnis.de>
Diff between schoolmath versions 0.4.2 dated 2023-08-21 and 0.5.0 dated 2026-07-07
schoolmath-0.4.2/schoolmath/man/is.decimal.Rd |only schoolmath-0.4.2/schoolmath/man/is.even.Rd |only schoolmath-0.4.2/schoolmath/man/is.negative.Rd |only schoolmath-0.4.2/schoolmath/man/is.odd.Rd |only schoolmath-0.4.2/schoolmath/man/is.positive.Rd |only schoolmath-0.4.2/schoolmath/man/is.real.positive.Rd |only schoolmath-0.4.2/schoolmath/man/is.whole.Rd |only schoolmath-0.5.0/schoolmath/DESCRIPTION | 22 schoolmath-0.5.0/schoolmath/MD5 | 40 - schoolmath-0.5.0/schoolmath/NAMESPACE | 9 schoolmath-0.5.0/schoolmath/NEWS.md | 6 schoolmath-0.5.0/schoolmath/R/RcppExports.R |only schoolmath-0.5.0/schoolmath/R/datasets.R | 8 schoolmath-0.5.0/schoolmath/R/functions.R | 764 -------------------- schoolmath-0.5.0/schoolmath/R/zzz.R |only schoolmath-0.5.0/schoolmath/data/primlist.rda |binary schoolmath-0.5.0/schoolmath/man/cancel.fraction.Rd | 4 schoolmath-0.5.0/schoolmath/man/decimal2fraction.Rd | 2 schoolmath-0.5.0/schoolmath/man/is.prim.Rd | 14 schoolmath-0.5.0/schoolmath/man/primes.Rd | 7 schoolmath-0.5.0/schoolmath/man/primlist.Rd | 8 schoolmath-0.5.0/schoolmath/src |only 22 files changed, 95 insertions(+), 789 deletions(-)
Title: Bayesian Quantile Regression Models for Complex Survey Data
Analysis
Description: Provides Bayesian quantile regression models for complex survey data
under informative sampling using survey-weighted estimators. Both single- and
multiple-output models are supported. To accelerate computation, all algorithms
are implemented in 'C++' using 'Rcpp', 'RcppArmadillo', and 'RcppEigen', and
are called from 'R'. See Nascimento and Gonçalves (2024) <doi:10.1093/jssam/smae015>
and Nascimento and Gonçalves (2025, in press).
Author: Tomas Rodriguez Taborda [aut, cre],
Johnatan Cardona Jimenez [aut],
Marcus L. Nascimento [aut],
Kelly Cristina Mota Goncalves [aut]
Maintainer: Tomas Rodriguez Taborda <torodriguezt@unal.edu.co>
Diff between bayesQRsurvey versions 0.2.2 dated 2026-04-06 and 0.3.0 dated 2026-07-07
bayesQRsurvey-0.2.2/bayesQRsurvey/NEWS.md |only bayesQRsurvey-0.3.0/bayesQRsurvey/DESCRIPTION | 12 - bayesQRsurvey-0.3.0/bayesQRsurvey/MD5 | 27 +- bayesQRsurvey-0.3.0/bayesQRsurvey/R/RcppExports.R | 4 bayesQRsurvey-0.3.0/bayesQRsurvey/R/bqr.svy.R | 96 +++++--- bayesQRsurvey-0.3.0/bayesQRsurvey/R/mo.bqr.svy.R | 7 bayesQRsurvey-0.3.0/bayesQRsurvey/R/summary_bqr_svy.R | 144 ++++++------ bayesQRsurvey-0.3.0/bayesQRsurvey/man/bqr.svy.Rd | 10 bayesQRsurvey-0.3.0/bayesQRsurvey/man/mo.bqr.svy.Rd | 7 bayesQRsurvey-0.3.0/bayesQRsurvey/src/EM_BWQR_AL_MO.cpp | 25 -- bayesQRsurvey-0.3.0/bayesQRsurvey/src/MCMC_BWQR_AL.cpp | 18 - bayesQRsurvey-0.3.0/bayesQRsurvey/src/MCMC_BWQR_AP.cpp | 182 ++++++++++------ bayesQRsurvey-0.3.0/bayesQRsurvey/src/MCMC_BWQR_SL.cpp | 60 ++--- bayesQRsurvey-0.3.0/bayesQRsurvey/src/RcppExports.cpp | 9 bayesQRsurvey-0.3.0/bayesQRsurvey/src/wrappers_bwqr.cpp | 34 +- 15 files changed, 352 insertions(+), 283 deletions(-)
Title: Publication-Ready Forest Plots with 'ggplot2'
Description: Transform model coefficients into flexible forest
plots using 'ggplot2'. Provides helpers to standardize
coefficient data from a range of modelling workflows and render
publication-ready forest plots with a consistent interface.
Author: Carson Richardson [aut, cre, cph]
Maintainer: Carson Richardson <carson.richardson@outlook.com>
Diff between ggforestplotR versions 0.2.2 dated 2026-06-05 and 0.3.0 dated 2026-07-07
ggforestplotR-0.2.2/ggforestplotR/tests/testthat/test-ggforestplot.R |only ggforestplotR-0.3.0/ggforestplotR/DESCRIPTION | 10 ggforestplotR-0.3.0/ggforestplotR/MD5 | 46 - ggforestplotR-0.3.0/ggforestplotR/NAMESPACE | 2 ggforestplotR-0.3.0/ggforestplotR/NEWS.md | 101 +- ggforestplotR-0.3.0/ggforestplotR/R/add_forest_table.R | 144 --- ggforestplotR-0.3.0/ggforestplotR/R/add_split_table.R | 129 --- ggforestplotR-0.3.0/ggforestplotR/R/bind_forest_models.R |only ggforestplotR-0.3.0/ggforestplotR/R/ggforestplot.R | 369 +++++++-- ggforestplotR-0.3.0/ggforestplotR/R/ggplot_add_scales.R | 99 ++ ggforestplotR-0.3.0/ggforestplotR/R/tidy_forest_model.R | 80 + ggforestplotR-0.3.0/ggforestplotR/R/utils.R | 406 ++++++---- ggforestplotR-0.3.0/ggforestplotR/README.md | 10 ggforestplotR-0.3.0/ggforestplotR/inst/doc/ggforestplotR-plot-customization.R | 17 ggforestplotR-0.3.0/ggforestplotR/inst/doc/ggforestplotR-plot-customization.Rmd | 67 + ggforestplotR-0.3.0/ggforestplotR/inst/doc/ggforestplotR-plot-customization.html | 20 ggforestplotR-0.3.0/ggforestplotR/man/add_forest_table.Rd | 27 ggforestplotR-0.3.0/ggforestplotR/man/add_split_table.Rd | 37 ggforestplotR-0.3.0/ggforestplotR/man/bind_forest_models.Rd |only ggforestplotR-0.3.0/ggforestplotR/man/ggforestplot.Rd | 17 ggforestplotR-0.3.0/ggforestplotR/man/tidy_forest_model.Rd | 7 ggforestplotR-0.3.0/ggforestplotR/tests/testthat/helper-forest-data.R |only ggforestplotR-0.3.0/ggforestplotR/tests/testthat/test-bind_forest_models.R |only ggforestplotR-0.3.0/ggforestplotR/tests/testthat/test-forest-table.R |only ggforestplotR-0.3.0/ggforestplotR/tests/testthat/test-ggforestplot-core.R |only ggforestplotR-0.3.0/ggforestplotR/tests/testthat/test-split-table.R |only ggforestplotR-0.3.0/ggforestplotR/tests/testthat/test-tidy_forest_model.R | 68 + ggforestplotR-0.3.0/ggforestplotR/vignettes/ggforestplotR-plot-customization.Rmd | 67 + 28 files changed, 1126 insertions(+), 597 deletions(-)
Title: Open Trade Statistics API Wrapper and Utility Program
Description: Access 'Open Trade Statistics' API from R to download
international trade data.
Author: Mauricio Vargas [aut, cre, cph] ,
Joshua Kunst [ctb] ,
Alexey Kravchenko [ctb] ,
Emma Mendelsohn [ctb] ,
Daniela de los Santos [ctb] ,
Emily Riederer [rev] ,
Mark Padgham [rev] ,
Amanda Dobbyn [rev] ,
Jorge Cimentada [rev] ,
UN Comtrade [dtc],
The Wo [...truncated...]
Maintainer: Mauricio Vargas <m.vargas.sepulveda@gmail.com>
Diff between tradestatistics versions 6.0.0 dated 2025-09-22 and 7.0.0 dated 2026-07-07
tradestatistics-6.0.0/tradestatistics/R/ots_gdp_deflator_adjustment.R |only tradestatistics-6.0.0/tradestatistics/data/ots_commodities.rda |only tradestatistics-6.0.0/tradestatistics/data/ots_commodities_short.rda |only tradestatistics-6.0.0/tradestatistics/data/ots_gdp_deflator.rda |only tradestatistics-6.0.0/tradestatistics/man/ots_commodities.Rd |only tradestatistics-6.0.0/tradestatistics/man/ots_commodities_short.Rd |only tradestatistics-6.0.0/tradestatistics/man/ots_commodity_code.Rd |only tradestatistics-6.0.0/tradestatistics/man/ots_gdp_deflator.Rd |only tradestatistics-6.0.0/tradestatistics/man/ots_gdp_deflator_adjustment.Rd |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yr.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yr_apple.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrp.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrpc.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrpc_cache.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrpc_fish.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrpc_fish_3codes.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrpc_fish_chapter.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrpc_vegetables_chapter.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2002_yrpc_wheat.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2004_yr.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_arg_2004_yrpc.yml |only tradestatistics-6.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_yug_2002_yrp.yml |only tradestatistics-6.0.0/tradestatistics/tests/testthat/test-ots_inflation_adjustment.R |only tradestatistics-7.0.0/tradestatistics/DESCRIPTION | 10 tradestatistics-7.0.0/tradestatistics/MD5 | 84 - tradestatistics-7.0.0/tradestatistics/NAMESPACE | 6 tradestatistics-7.0.0/tradestatistics/NEWS.md | 5 tradestatistics-7.0.0/tradestatistics/R/ots_cache.R | 2 tradestatistics-7.0.0/tradestatistics/R/ots_create_tidy_data.R | 531 +++------- tradestatistics-7.0.0/tradestatistics/R/ots_read_from_api.R | 76 + tradestatistics-7.0.0/tradestatistics/R/ots_strings_processing.R | 212 +-- tradestatistics-7.0.0/tradestatistics/R/tradestatistics-package.R | 91 - tradestatistics-7.0.0/tradestatistics/build/vignette.rds |binary tradestatistics-7.0.0/tradestatistics/data/ots_countries.rda |binary tradestatistics-7.0.0/tradestatistics/data/ots_industries.rda |only tradestatistics-7.0.0/tradestatistics/data/ots_sectors.rda |only tradestatistics-7.0.0/tradestatistics/data/ots_tables.rda |binary tradestatistics-7.0.0/tradestatistics/inst/doc/basic-usage.R | 88 - tradestatistics-7.0.0/tradestatistics/inst/doc/basic-usage.Rmd | 162 --- tradestatistics-7.0.0/tradestatistics/inst/doc/basic-usage.html | 453 ++++---- tradestatistics-7.0.0/tradestatistics/man/ots_countries.Rd | 14 tradestatistics-7.0.0/tradestatistics/man/ots_create_tidy_data.Rd | 51 tradestatistics-7.0.0/tradestatistics/man/ots_create_tidy_data_memoised.Rd | 11 tradestatistics-7.0.0/tradestatistics/man/ots_create_tidy_data_unmemoised.Rd | 11 tradestatistics-7.0.0/tradestatistics/man/ots_industries.Rd |only tradestatistics-7.0.0/tradestatistics/man/ots_industry_code.Rd |only tradestatistics-7.0.0/tradestatistics/man/ots_read_from_api.Rd | 10 tradestatistics-7.0.0/tradestatistics/man/ots_sector_code.Rd |only tradestatistics-7.0.0/tradestatistics/man/ots_sectors.Rd |only tradestatistics-7.0.0/tradestatistics/man/ots_tables.Rd | 6 tradestatistics-7.0.0/tradestatistics/man/tradestatistics-package.Rd | 5 tradestatistics-7.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_2002_1.yml |only tradestatistics-7.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_2002_2.yml |only tradestatistics-7.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_2002_3.yml |only tradestatistics-7.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_2002_4.yml |only tradestatistics-7.0.0/tradestatistics/tests/fixtures/vcr_cassettes/chl_2002_5.yml |only tradestatistics-7.0.0/tradestatistics/tests/testthat/test-ots_country_code.R | 20 tradestatistics-7.0.0/tradestatistics/tests/testthat/test-ots_create_tidy_data.R | 326 ------ tradestatistics-7.0.0/tradestatistics/tests/testthat/test-ots_strings_processing.R | 72 - tradestatistics-7.0.0/tradestatistics/vignettes/basic-usage.Rmd | 162 --- 60 files changed, 856 insertions(+), 1552 deletions(-)
More information about tradestatistics at CRAN
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Title: Inference for Panel Partially Observed Markov Processes
Description: Data analysis based on panel partially-observed Markov process (PanelPOMP) models. To implement such models, simulate them and fit them to panel data, 'panelPomp' extends some of the facilities provided for time series data by the 'pomp' package. Implemented methods include filtering (panel particle filtering) and maximum likelihood estimation (Panel Iterated Filtering) as proposed in Breto, Ionides and King (2020) "Panel Data Analysis via Mechanistic Models" <doi:10.1080/01621459.2019.1604367>.
Author: Carles Breto [aut] ,
Edward L. Ionides [aut] ,
Aaron A. King [aut] ,
Jesse Wheeler [aut, cre] ,
Aaron Abkemeier [ctb]
Maintainer: Jesse Wheeler <jesse.wheeler@usu.edu>
Diff between panelPomp versions 1.7.0.0 dated 2025-05-09 and 1.8.0.0 dated 2026-07-07
DESCRIPTION | 12 +++++----- MD5 | 46 +++++++++++++++++++++--------------------- R/panel_designs.R | 46 ++++++++++++++++++++++++++---------------- R/uk_measles.R | 2 - README.md | 4 ++- build/partial.rdb |binary build/vignette.rds |binary inst/NEWS | 7 ++++++ inst/NEWS.Rd | 6 +++++ inst/doc/getting-started.html | 11 ++++++---- man/as.Rd | 2 - man/contacts.Rd | 8 +++---- man/mif2.Rd | 6 ++--- man/panelGompertz.Rd | 8 +++---- man/panelMeasles.Rd | 8 +++---- man/panelPomp-package.Rd | 3 +- man/panelPomp.Rd | 6 ++--- man/panelPomp_methods.Rd | 4 +-- man/panelRandomWalk.Rd | 8 +++---- man/panel_loglik.Rd | 8 +++---- man/pfilter.Rd | 6 ++--- man/uk_measles.Rd | 2 - tests/panel_designs.R | 14 ++++++++++++ tests/panel_designs.Rout.save | 19 +++++++++++++++-- 24 files changed, 148 insertions(+), 88 deletions(-)
Title: Access Vegetation Databases and Treat Taxonomy
Description: Handling of vegetation data from different sources but especially Turboveg 2.0. Taxonomic harmonization (given appropriate taxonomic lists, e.g. GermanSL and EuroSL (Euro+Med extended) see <https://eurosl.infinitenature.org>).
Author: Florian Jansen [aut, cre]
Maintainer: Florian Jansen <florian.jansen@uni-rostock.de>
This is a re-admission after prior archival of version 1.9.15 dated 2025-12-01
Diff between vegdata versions 1.9.15 dated 2025-12-01 and 1.9.18 dated 2026-07-07
vegdata-1.9.15/vegdata/R/db_download.R |only vegdata-1.9.15/vegdata/R/sql.R |only vegdata-1.9.15/vegdata/R/src.R |only vegdata-1.9.15/vegdata/man/db_download.Rd |only vegdata-1.9.15/vegdata/man/sql_collect.Rd |only vegdata-1.9.15/vegdata/man/src_vegdata.Rd |only vegdata-1.9.18/vegdata/DESCRIPTION | 25 vegdata-1.9.18/vegdata/MD5 | 84 +- vegdata-1.9.18/vegdata/NAMESPACE | 9 vegdata-1.9.18/vegdata/R/cwm.R | 3 vegdata-1.9.18/vegdata/R/data.R | 2 vegdata-1.9.18/vegdata/R/reShape.veg.R | 5 vegdata-1.9.18/vegdata/R/syntab.R | 362 ++++++++-- vegdata-1.9.18/vegdata/R/tax.child.R | 15 vegdata-1.9.18/vegdata/R/tax.names.R | 88 +- vegdata-1.9.18/vegdata/R/tax.r | 5 vegdata-1.9.18/vegdata/R/tax.reflist.r | 16 vegdata-1.9.18/vegdata/R/taxref_download.R |only vegdata-1.9.18/vegdata/R/taxval.r | 9 vegdata-1.9.18/vegdata/R/tv.home.R | 16 vegdata-1.9.18/vegdata/R/tv.site.R | 2 vegdata-1.9.18/vegdata/R/vegdata-internal.r | 130 --- vegdata-1.9.18/vegdata/R/vegdata-package.R | 2 vegdata-1.9.18/vegdata/R/zzz.R | 5 vegdata-1.9.18/vegdata/build/vignette.rds |binary vegdata-1.9.18/vegdata/data/taxlevels.rda |binary vegdata-1.9.18/vegdata/inst/ChangeLog | 4 vegdata-1.9.18/vegdata/inst/doc/vegdata.Rnw | 8 vegdata-1.9.18/vegdata/inst/doc/vegdata.pdf |binary vegdata-1.9.18/vegdata/inst/extdata/tvdata/Data/elbaue-esveg.xml | 2 vegdata-1.9.18/vegdata/inst/extdata/tvdata/Species/README | 2 vegdata-1.9.18/vegdata/man/TCS.replace.Rd | 2 vegdata-1.9.18/vegdata/man/child.Rd | 2 vegdata-1.9.18/vegdata/man/db_path.Rd | 2 vegdata-1.9.18/vegdata/man/lc.0.Rd | 2 vegdata-1.9.18/vegdata/man/lc.1.Rd | 2 vegdata-1.9.18/vegdata/man/lc.all.Rd | 2 vegdata-1.9.18/vegdata/man/syntab.Rd | 10 vegdata-1.9.18/vegdata/man/taxlevels.Rd | 4 vegdata-1.9.18/vegdata/man/taxname.simpl.Rd | 3 vegdata-1.9.18/vegdata/man/taxref_download.Rd |only vegdata-1.9.18/vegdata/man/tv.home.Rd | 4 vegdata-1.9.18/vegdata/man/tv.site.Rd | 6 vegdata-1.9.18/vegdata/man/vegdata-package.Rd | 7 vegdata-1.9.18/vegdata/man/vegdata.Rd | 2 vegdata-1.9.18/vegdata/vignettes/lib.bib | 13 vegdata-1.9.18/vegdata/vignettes/vegdata.Rnw | 8 47 files changed, 530 insertions(+), 333 deletions(-)
Title: Automated Soil Profile Classification per WRB 2022, 'SiBCS' 5
and USDA Soil Taxonomy 13
Description: Implements deterministic classification keys for the World
Reference Base for Soil Resources 2022 (4th edition) and the Brazilian
System of Soil Classification ('SiBCS', 5th edition). Provides a unified
profile representation with explicit per-attribute provenance, multimodal
extraction from field reports and photos via vision-language models,
spatial priors from 'SoilGrids' and national soil maps, and gap-filling of
soil attributes from Vis-NIR or MIR spectra via the Open Soil Spectral
Library ('OSSL'). The taxonomic key itself is never delegated to a language
model; LLMs are restricted to schema-validated extraction. Each
classification result reports a key trace, a provenance-aware evidence
grade, and ambiguities that further measurement would resolve.
Author: Hugo Rodrigues [aut, cre]
Maintainer: Hugo Rodrigues <rodrigues.machado.hugo@gmail.com>
Diff between soilKey versions 0.9.157 dated 2026-06-30 and 0.9.184 dated 2026-07-07
soilKey-0.9.157/soilKey/inst/shiny/classify_app_pro/R/mod_spatial.R |only soilKey-0.9.184/soilKey/DESCRIPTION | 12 soilKey-0.9.184/soilKey/MD5 | 88 - soilKey-0.9.184/soilKey/NAMESPACE | 4 soilKey-0.9.184/soilKey/NEWS.md | 593 +++++++ soilKey-0.9.184/soilKey/R/class-ClassificationResult.R | 36 soilKey-0.9.184/soilKey/R/key-trace-format.R |only soilKey-0.9.184/soilKey/R/read-pedon-csv.R |only soilKey-0.9.184/soilKey/R/report-assets.R |only soilKey-0.9.184/soilKey/R/report-html.R | 187 +- soilKey-0.9.184/soilKey/R/report-pdf.R | 170 +- soilKey-0.9.184/soilKey/R/spectra-munsell.R | 155 + soilKey-0.9.184/soilKey/R/spectra-preprocess.R | 145 + soilKey-0.9.184/soilKey/README.md | 5 soilKey-0.9.184/soilKey/inst/doc/v09_perfil_embrapa_pt.html | 94 - soilKey-0.9.184/soilKey/inst/examples |only soilKey-0.9.184/soilKey/inst/extdata/perfil_exemplo.csv |only soilKey-0.9.184/soilKey/inst/i18n/report_translations.yaml | 14 soilKey-0.9.184/soilKey/inst/i18n/translations.yaml | 402 ++++ soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_acknowledgements.R |only soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_chat.R |only soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_classify.R | 269 ++- soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_map.R | 838 +++++++--- soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_map_batch.R | 172 +- soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_map_grid.R | 309 +++ soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_pedon.R | 292 ++- soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_photo.R | 228 ++ soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_report.R | 70 soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_settings.R | 134 + soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_spectra.R | 317 ++- soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/mod_uncertainty.R | 281 +++ soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/R/utils_ui.R | 97 + soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/app.R | 242 ++ soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/www/demo_profile.jpg |only soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/www/demo_spectrum.csv |only soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/www/logo.png |only soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/www/soilgrids_wrb_demo.tif |only soilKey-0.9.184/soilKey/inst/shiny/classify_app_pro/www/soilkey.css | 453 ++++- soilKey-0.9.184/soilKey/man/apply_spectral_preprocessing.Rd |only soilKey-0.9.184/soilKey/man/classify_csv.Rd |only soilKey-0.9.184/soilKey/man/key_trace_table.Rd |only soilKey-0.9.184/soilKey/man/predict_munsell_from_spectra.Rd | 21 soilKey-0.9.184/soilKey/man/read_pedon_csv.Rd |only soilKey-0.9.184/soilKey/tests/testthat/test-app-demos-v09167.R |only soilKey-0.9.184/soilKey/tests/testthat/test-key-trace-format-v09165.R |only soilKey-0.9.184/soilKey/tests/testthat/test-read-pedon-csv.R |only soilKey-0.9.184/soilKey/tests/testthat/test-report-assets-v09168.R |only soilKey-0.9.184/soilKey/tests/testthat/test-shiny-pro-servers.R | 5 soilKey-0.9.184/soilKey/tests/testthat/test-spectra-preprocess.R | 66 soilKey-0.9.184/soilKey/tests/testthat/test-v09101-shiny-map.R | 2 soilKey-0.9.184/soilKey/tests/testthat/test-v09158-munsell-whitepoint.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v09174-shiny-map-unified.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v09175-app-reactivity.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v09176-shiny-chat.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v09177-spectra-preproc-app.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v09178-map-fixes.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v09180-uncertainty-group.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v09183-munsell-value10.R |only soilKey-0.9.184/soilKey/tests/testthat/test-v0997-shiny-pro-app.R | 18 59 files changed, 4793 insertions(+), 926 deletions(-)
Title: 'Serpstat' API Wrapper
Description: The primary goal of 'Serpstat' API <https://api-docs.serpstat.com/docs/serpstat-public-api/jenasqbwtxdlr-introduction-to-serpstat-api>
is to reduce manual SEO (search engine optimization) and PPC (pay-per-click)
tasks. You can automate your keywords research or competitors analysis
with this API wrapper.
Author: Alex Danilin [aut, cre]
Maintainer: Alex Danilin <alexnikdanilin@gmail.com>
Diff between serpstatr versions 0.4.3 dated 2026-07-02 and 0.5.0 dated 2026-07-07
DESCRIPTION | 6 MD5 | 136 ++ NAMESPACE | 111 ++ NEWS.md | 49 R/audit.R | 785 +++++++++++++++ R/backlinks.R | 838 ++++++++++++++++ R/credits.R |only R/domain_classification.R |only R/rank_tracker.R | 900 +++++++++++++++++ R/search_analytics.R | 1303 +++++++++++++++++++++++++- R/serp_crawling.R | 395 +++++-- R/team_management.R |only R/volume_checker.R |only README.md | 139 ++ man/sst_au_export.Rd |only man/sst_au_get_audit.Rd |only man/sst_au_get_categories_statistic.Rd |only man/sst_au_get_default_settings.Rd |only man/sst_au_get_error_elements.Rd |only man/sst_au_get_error_rows.Rd |only man/sst_au_get_history_by_count_error.Rd |only man/sst_au_get_list.Rd |only man/sst_au_get_page_audit.Rd |only man/sst_au_get_pages_list.Rd |only man/sst_au_get_report_without_details.Rd |only man/sst_au_get_reports_list_by_page.Rd |only man/sst_au_get_scan_user_url_list.Rd |only man/sst_au_get_settings.Rd |only man/sst_au_get_sub_elements_by_crc.Rd |only man/sst_au_page_names.Rd |only man/sst_au_remove.Rd |only man/sst_au_rescan.Rd |only man/sst_au_scan.Rd |only man/sst_au_set_settings.Rd |only man/sst_au_stop_page.Rd |only man/sst_au_stop_site.Rd |only man/sst_au_user_log.Rd |only man/sst_bl_anchors.Rd |only man/sst_bl_changes_history.Rd |only man/sst_bl_domains_intersection.Rd |only man/sst_bl_domains_intersection_summary.Rd |only man/sst_bl_lost_backlinks.Rd |only man/sst_bl_lost_outlinks.Rd |only man/sst_bl_new_backlinks.Rd |only man/sst_bl_out_domains.Rd |only man/sst_bl_out_threats.Rd |only man/sst_bl_out_threats_links.Rd |only man/sst_bl_outlinks.Rd |only man/sst_bl_redirected_domains.Rd |only man/sst_bl_sdr_distribution.Rd |only man/sst_bl_threats.Rd |only man/sst_bl_threats_links.Rd |only man/sst_bl_tld_distribution.Rd |only man/sst_bl_top_anchors.Rd |only man/sst_bl_top_pages.Rd |only man/sst_cr_get_audit_stats.Rd |only man/sst_dc_add_task.Rd |only man/sst_dc_get_task.Rd |only man/sst_dc_get_task_list.Rd |only man/sst_rt_add_project_competitor.Rd |only man/sst_rt_add_project_keywords.Rd |only man/sst_rt_add_project_mirror.Rd |only man/sst_rt_add_project_region.Rd |only man/sst_rt_add_rt_project.Rd |only man/sst_rt_create_and_run_project_tracking.Rd |only man/sst_rt_create_project_tags.Rd |only man/sst_rt_delete_project_competitor.Rd |only man/sst_rt_delete_project_keywords.Rd |only man/sst_rt_delete_project_mirror.Rd |only man/sst_rt_delete_project_region.Rd |only man/sst_rt_delete_project_tags.Rd |only man/sst_rt_get_cities.Rd |only man/sst_rt_get_countries.Rd |only man/sst_rt_get_districts.Rd |only man/sst_rt_get_project_competitors.Rd |only man/sst_rt_get_project_keywords.Rd |only man/sst_rt_get_project_mirrors.Rd |only man/sst_rt_get_project_positions.Rd |only man/sst_rt_get_project_regions.Rd |only man/sst_rt_get_project_status.Rd |only man/sst_rt_get_project_tags.Rd |only man/sst_rt_get_projects.Rd |only man/sst_rt_get_rt_project.Rd |only man/sst_rt_get_rt_schedule.Rd |only man/sst_rt_run_project_tracking.Rd |only man/sst_rt_set_rt_schedule.Rd |only man/sst_rt_update_project_keywords.Rd |only man/sst_sa_category_top_domains.Rd |only man/sst_sa_domain_ad_competitors.Rd |only man/sst_sa_domain_ad_keywords.Rd |only man/sst_sa_domain_aio_brand_opportunities.Rd |only man/sst_sa_domain_aio_summary.Rd |only man/sst_sa_domain_all_regions_traffic.Rd |only man/sst_sa_domain_competitors.Rd |only man/sst_sa_domain_export_positions.Rd |only man/sst_sa_domain_keywords_by_language.Rd |only man/sst_sa_domain_urls.Rd |only man/sst_sa_domains_intersection.Rd |only man/sst_sa_domains_rating_data.Rd |only man/sst_sa_domains_unique_keywords.Rd |only man/sst_sa_keyword_export_keywords_phrase.Rd |only man/sst_sa_keyword_export_suggestions.Rd |only man/sst_sa_keyword_get_ad_keywords.Rd |only man/sst_sa_keyword_get_ads_competitors.Rd |only man/sst_sa_keyword_get_competitors.Rd |only man/sst_sa_keyword_get_keyword_top.Rd |only man/sst_sa_keyword_get_suggestions.Rd |only man/sst_sa_keyword_get_top_urls.Rd |only man/sst_sa_market_categories.Rd |only man/sst_sa_url_get_summary_traffic.Rd |only man/sst_sa_url_get_url_competitors.Rd |only man/sst_sa_url_get_url_keywords.Rd |only man/sst_sa_url_get_url_missing_keywords.Rd |only man/sst_sc_add_keyword_list.Rd |only man/sst_sc_get_keyword_serp.Rd |only man/sst_sc_get_list.Rd |only man/sst_sc_get_parsing_balance.Rd |only man/sst_tm_activate_user.Rd |only man/sst_tm_add_user.Rd |only man/sst_tm_deactivate_user.Rd |only man/sst_tm_get_list.Rd |only man/sst_tm_remove_user.Rd |only man/sst_vc_add_keyword_list_freq.Rd |only man/sst_vc_get_task_result.Rd |only man/sst_vc_get_task_status.Rd |only tests/testthat/test_backlinks.R |only tests/testthat/test_new_specs.R |only tests/testthat/test_search_analytics.R |only 128 files changed, 4518 insertions(+), 144 deletions(-)
Title: An R Interface to the California Academy of Sciences Eschmeyer's
Catalog of Fishes
Description: Accesses the California Academy of Sciences Eschmeyer's Catalog of Fishes in R using web requests. The Catalog of fishes is the leading authority in fish taxonomy. Functions in the package allow users to search for fish taxa and valid names, retrieve taxonomic references, retrieve monthly taxonomic changes, obtain natural history collection information, and see the number of species by taxonomic group. For more information on the Catalog: Fricke, R., Eschmeyer, W. N. & R. van der Laan (eds) 2025. ESCHMEYER'S CATALOG OF FISHES <https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp>.
Author: Samuel R. Borstein [aut, cre],
Brandon Dominy [aut],
Brian O'Meara [aut]
Maintainer: Samuel R. Borstein <sam@borstein.com>
Diff between rcatfish versions 1.0.3 dated 2026-06-12 and 1.0.4 dated 2026-07-07
DESCRIPTION | 8 ++++---- MD5 | 10 +++++----- NEWS.md | 4 ++-- build/vignette.rds |binary inst/doc/rcatfish-vignette.html | 2 +- tests/testthat/test_rcatfish_updates.R | 2 +- 6 files changed, 13 insertions(+), 13 deletions(-)
Title: Make Static HTML Documentation for a Package
Description: Generate an attractive and useful website from a source
package. 'pkgdown' converts your documentation, vignettes, 'README',
and more to 'HTML' making it easy to share information about your
package online.
Author: Hadley Wickham [aut, cre] ,
Jay Hesselberth [aut] ,
Maelle Salmon [aut] ,
Olivier Roy [aut],
Salim Brueggemann [aut] ,
Posit Software, PBC [cph, fnd]
Maintainer: Hadley Wickham <hadley@posit.co>
Diff between pkgdown versions 2.2.0 dated 2025-11-06 and 2.2.1 dated 2026-07-07
DESCRIPTION | 16 +-- MD5 | 101 ++++++++++++------------- NAMESPACE | 1 NEWS.md | 10 ++ R/build-articles.R | 2 R/build-llm.R | 8 + R/build-search-docs.R | 6 - R/build.R | 2 R/pkgdown-package.R | 2 R/preview.R | 49 +++++++++--- R/rd-html.R | 3 build/stage23.rdb |binary build/vignette.rds |binary inst/doc/customise.Rmd | 2 inst/doc/customise.html | 2 inst/doc/quarto.html | 5 - man/build_articles.Rd | 14 +-- man/build_home.Rd | 12 +- man/build_llm_docs.Rd | 12 +- man/build_news.Rd | 12 +- man/build_reference.Rd | 12 +- man/build_search.Rd | 6 - man/build_site.Rd | 2 man/build_tutorials.Rd | 12 +- man/deploy_site_github.Rd | 2 man/deploy_to_branch.Rd | 2 man/index.Rd | 2 man/init_site.Rd | 2 man/pkgdown-package.Rd | 1 man/preview_site.Rd | 10 +- man/stop_preview.Rd |only man/test-crayon.Rd | 2 man/test-dont.Rd | 2 man/test-figures.Rd | 2 man/test-links.Rd | 2 man/test-lists.Rd | 2 man/test-long-lines.Rd | 2 man/test-math-examples.Rd | 2 man/test-output-styles.Rd | 2 man/test-params.Rd | 2 man/test-sexpr-title.Rd | 2 man/test-tables.Rd | 2 man/test-verbatim.Rd | 2 tests/testthat/_snaps/build-quarto-articles.md | 3 tests/testthat/_snaps/build-reference.md | 2 tests/testthat/_snaps/init.md | 6 - tests/testthat/test-build-article.R | 4 tests/testthat/test-build-home-authors.R | 40 --------- tests/testthat/test-preview.R | 88 +++++++++++++++++++++ tests/testthat/test-rd-html.R | 7 + tests/testthat/test-utils.R | 2 vignettes/customise.Rmd | 2 52 files changed, 294 insertions(+), 194 deletions(-)
Title: Heuristic Index-Based Record Linkage
Description: Links records that refer to the same entity across sources that
share no common key, such as people, firms, or addresses with spelling
variation, abbreviations, or reordered words. Linkage is described
declaratively as a strategy that normalises, tokenises, phonetically
encodes, weights, and blocks each field; candidate pairs are then scored
by the rarity-weighted overlap of their tokens and every score is
attributed back to individual tokens for explainability. Strategies
compose into staged pipelines of exact, fuzzy, and optional
embedding-based matching that carry unmatched records forward and resolve
entities as connected components. The same strategy runs on an in-memory
'data.table' backend or an out-of-core 'DuckDB' backend, and diagnostic
and calibration tools help tune a strategy and filter false positives.
The token-retrieval heuristic follows Doherr (2023)
<doi:10.2139/ssrn.4326848>.
Author: Eduard Bruell [aut, cre]
Maintainer: Eduard Bruell <eduard.bruell@zew.de>
Diff between joinery versions 1.0.0 dated 2026-07-07 and 1.0.1 dated 2026-07-07
DESCRIPTION | 6 +- MD5 | 8 +-- NEWS.md | 15 +++++++ R/methods_duckdb_batch.R | 75 ++++++++++++++++++++++++------------- tests/testthat/test_batch_duckdb.R | 54 ++++++++++++++++++++++++++ 5 files changed, 125 insertions(+), 33 deletions(-)
Title: A Framework for Robust Shiny Applications
Description: An opinionated framework for building a production-ready
'Shiny' application. This package contains a series of tools for
building a robust 'Shiny' application from start to finish.
Author: Colin Fay [cre, aut] ,
Vincent Guyader [aut] ,
Sebastien Rochette [aut] ,
Cervan Girard [aut] ,
Novica Nakov [ctb],
David Granjon [ctb],
Arthur Breant [ctb],
Antoine Languillaume [ctb],
Ilya Zarubin [ctb],
ThinkR [cph]
Maintainer: Colin Fay <contact@colinfay.me>
Diff between golem versions 1.0.0 dated 2026-06-26 and 1.0.1 dated 2026-07-07
DESCRIPTION | 6 +++--- MD5 | 20 ++++++++++---------- NEWS.md | 14 +++++++++++++- R/use_favicon.R | 9 ++++----- README.md | 12 ++++++------ build/vignette.rds |binary inst/doc/a-getting-started.html | 4 ++-- inst/doc/b-develop.html | 4 ++-- inst/doc/c-deploy.html | 4 ++-- inst/doc/d-js.html | 4 ++-- inst/doc/e-config.html | 4 ++-- 11 files changed, 46 insertions(+), 35 deletions(-)
Title: Cleaning Geometries from Spatial Objects
Description: Provides a set of utility tools to inspect spatial objects, facilitate
handling and reporting of topology errors and geometry validity issue with sp objects.
Finally, it provides a geometry cleaner that will fix all geometry problems,
and eliminate (at least reduce) the likelihood of having issues when doing
spatial data processing.
Author: Emmanuel Blondel [aut, cre]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between cleangeo versions 0.3-1 dated 2023-09-01 and 0.3-2 dated 2026-07-07
DESCRIPTION | 11 +- MD5 | 17 +-- build/vignette.rds |binary inst/doc/quickstart.R | 4 inst/doc/quickstart.html | 211 +++++++++++++++++++++----------------------- inst/extdata/example.dbf |binary inst/extdata/example.prj |only inst/extdata/example.shp |binary inst/extdata/example.shx |binary tests/testthat/test_Clean.R | 11 +- 10 files changed, 128 insertions(+), 126 deletions(-)
Title: Likelihood Based Inference for ARIMA Modeling
Description: Estimating and analyzing auto regressive integrated moving average
(ARIMA) models. The primary function in this package is arima(), which fits
an ARIMA model to univariate time series data using a random restart
algorithm. This approach frequently leads to models that have model
likelihood greater than or equal to that of the likelihood obtained by
fitting the same model using the arima() function from the 'stats' package.
This package enables proper optimization of model likelihoods, which is a
necessary condition for performing likelihood ratio tests. This package
relies heavily on the source code of the arima() function of the 'stats'
package. For more information, please see Jesse Wheeler and Edward L.
Ionides (2025) <doi:10.1371/journal.pone.0333993>.
Author: Jesse Wheeler [aut, cre, cph],
Noel McAllister [aut],
Dhajanae Sylvertooth [aut],
Edward Ionides [ctb],
Brian Ripley [ctb] ,
R Core Team [cph]
Maintainer: Jesse Wheeler <jesse.wheeler@usu.edu>
Diff between arima2 versions 3.4.3 dated 2025-12-10 and 3.4.4 dated 2026-07-07
DESCRIPTION | 14 +++++++------- MD5 | 4 ++-- NEWS.md | 7 ++++++- 3 files changed, 15 insertions(+), 10 deletions(-)
Title: Estimate 3D Orientations from 2D Landmarks
Description: Estimates possible 3D orientations of an object from the 2D image coordinates
of two landmarks and an approximate camera-object elevation angle. Because a projected
2D angle can be compatible with multiple 3D pitch, yaw, and view-elevation angles, the
package returns compatible sets of orientations rather than a single unconstrained
estimate.
Author: Joao C T Menezes [aut, cre, cph]
Maintainer: Joao C T Menezes <jocateme@gmail.com>
Diff between araponga versions 1.0.1 dated 2026-07-02 and 1.1.0 dated 2026-07-07
DESCRIPTION | 6 +- MD5 | 37 +++++++------- NEWS.md | 10 +++ R/download.simdata.R | 84 +++++++++++++++++++++++++-------- R/find.3d.R | 29 +++++++---- R/pitch2d.from.3d.R | 12 +++- R/pitch2d.w.error.R | 4 - R/plot.angles.R | 14 +++-- R/simdata-utils.R |only R/summarize.yaws.R | 2 README.md | 18 +++++-- inst/doc/araponga.R | 2 inst/doc/araponga.Rmd | 5 - inst/doc/araponga.html | 6 +- man/download.simdata.Rd | 6 +- man/find.3d.Rd | 8 +-- man/pitch2d.w.error.Rd | 4 - tests/testthat/test-download.simdata.R | 37 +++++++++++++- tests/testthat/test-find.3d.R | 25 +++------ vignettes/araponga.Rmd | 5 - 20 files changed, 209 insertions(+), 105 deletions(-)
Title: MR Spectroscopy Analysis Tools
Description: Tools for reading, visualising and processing Magnetic Resonance
Spectroscopy data. The package includes methods for spectral fitting: Wilson
(2021) <DOI:10.1002/mrm.28385>, Wilson (2025) <DOI:10.1002/mrm.30462> and
spectral alignment: Wilson (2018) <DOI:10.1002/mrm.27605>.
Author: Martin Wilson [cre, aut] ,
Yong Wang [ctb],
John Muschelli [ctb]
Maintainer: Martin Wilson <martin.wilson111@gmail.com>
Diff between spant versions 4.2.0 dated 2026-06-20 and 4.3.0 dated 2026-07-07
DESCRIPTION | 8 - MD5 | 26 +++--- NAMESPACE | 2 NEWS.md | 6 + R/fit_svs.R | 32 +++++++ R/fit_svs_edited.R | 2 R/fmrs.R | 31 ++++--- R/mrs_read_dicom.R | 5 - inst/doc/abfit-baseline-opts.html | 12 +- inst/doc/spant-basis-simulation.html | 8 - inst/doc/spant-intro.html | 122 +++++++++++++++--------------- inst/doc/spant-metabolite-simulation.html | 10 +- inst/doc/spant-preprocessing.html | 14 +-- man/auto_pad_seq.Rd |only man/fit_svs_btrg_v1.Rd |only 15 files changed, 164 insertions(+), 114 deletions(-)
Title: Handling Missing Values with Multivariate Data Analysis
Description: Imputation of incomplete continuous or categorical datasets; Missing values are imputed with a principal component analysis (PCA), a multiple correspondence analysis (MCA) model or a multiple factor analysis (MFA) model; Perform multiple imputation with and in PCA or MCA.
Author: Francois Husson [aut, cre] ,
Julie Josse [aut]
Maintainer: Francois Husson <francois.husson@institut-agro.fr>
Diff between missMDA versions 1.21 dated 2026-02-12 and 1.22 dated 2026-07-07
missMDA-1.21/missMDA/R/imputeCA.r |only missMDA-1.22/missMDA/DESCRIPTION | 8 +-- missMDA-1.22/missMDA/MD5 | 30 ++++++------ missMDA-1.22/missMDA/NAMESPACE | 2 missMDA-1.22/missMDA/R/MIFAMD.R | 38 +++++---------- missMDA-1.22/missMDA/R/imputeCA.R |only missMDA-1.22/missMDA/R/imputeMCA.R | 31 +++++++----- missMDA-1.22/missMDA/R/imputeMFA.R | 45 +++++++++--------- missMDA-1.22/missMDA/R/imputeMultilevel.R | 5 -- missMDA-1.22/missMDA/R/imputePCA.R | 22 ++++---- missMDA-1.22/missMDA/R/plot.MIFAMD.R | 2 missMDA-1.22/missMDA/R/plot.MIPCA.R | 2 missMDA-1.22/missMDA/build/partial.rdb |binary missMDA-1.22/missMDA/build/vignette.rds |binary missMDA-1.22/missMDA/inst/doc/MultipleImputation.html | 2 missMDA-1.22/missMDA/inst/doc/missMDA.html | 2 missMDA-1.22/missMDA/man/imputeMCA.Rd | 2 17 files changed, 94 insertions(+), 97 deletions(-)
Title: Binomial Confidence Intervals for Several Parameterizations
Description: Constructs confidence intervals on the probability of
success in a binomial experiment via several parameterizations.
Author: Sundar Dorai-Raj [aut],
Arianna D. Cascone [aut, cre]
Maintainer: Arianna D. Cascone <ariannacascone4@gmail.com>
Diff between binom versions 1.1-1.1 dated 2022-05-02 and 1.1-2 dated 2026-07-07
DESCRIPTION | 21 +++++++++++++++------ MD5 | 9 +++++---- NEWS.md |only R/binom.bayes.R | 12 ++++++------ R/binom.confint.R | 2 +- man/binom.confint.Rd | 2 +- 6 files changed, 28 insertions(+), 18 deletions(-)
Title: G-Wishart Normalising Constants for Gaussian Graphical Models
Description: Computes G-Wishart normalising constants through a Fourier approach. Either exact analytical results, numerical integration or Monte Carlo estimation are employed. Details at C. Wong, G. Moffa and J. Kuipers (2024), <doi:10.48550/arXiv.2404.06803>. Also includes approximations of the ratio of normalising constants, see details at C. Wong, G. Moffa and J. Kuipers (2025), <doi:10.48550/arXiv.2503.13046>.
Author: Ching Wong [aut],
Jack Kuipers [aut, cre]
Maintainer: Jack Kuipers <jack.kuipers@bsse.ethz.ch>
Diff between GWnorm versions 1.0.1 dated 2026-05-27 and 1.0.2 dated 2026-07-07
GWnorm-1.0.1/GWnorm/man/Clique_complete.Rd |only GWnorm-1.0.1/GWnorm/man/annotate_cliques.Rd |only GWnorm-1.0.1/GWnorm/man/chordal_factor.Rd |only GWnorm-1.0.1/GWnorm/man/clique_update_D.Rd |only GWnorm-1.0.1/GWnorm/man/form_triangle.Rd |only GWnorm-1.0.1/GWnorm/man/local_mean_grad.Rd |only GWnorm-1.0.1/GWnorm/man/local_precision.Rd |only GWnorm-1.0.1/GWnorm/man/predict_row.Rd |only GWnorm-1.0.2/GWnorm/DESCRIPTION | 10 +-- GWnorm-1.0.2/GWnorm/MD5 | 37 ++++------- GWnorm-1.0.2/GWnorm/R/Chordal_factor.R | 8 +- GWnorm-1.0.2/GWnorm/R/I_Gapprox.R | 38 ++++++++--- GWnorm-1.0.2/GWnorm/R/I_Gfns.R | 5 + GWnorm-1.0.2/GWnorm/R/I_Gnorm.R | 5 + GWnorm-1.0.2/GWnorm/R/Integrand_fns.R | 26 ++++---- GWnorm-1.0.2/GWnorm/R/PD_complete.R | 70 +++++++++++----------- GWnorm-1.0.2/GWnorm/R/special_tests.R | 16 ++--- GWnorm-1.0.2/GWnorm/R/trace_fns.R |only GWnorm-1.0.2/GWnorm/man/C_GtoI_G.Rd | 5 - GWnorm-1.0.2/GWnorm/man/I_G_BD.Rd | 4 - GWnorm-1.0.2/GWnorm/man/I_G_ratio_approx.Rd | 8 +- GWnorm-1.0.2/GWnorm/man/I_G_ratio_approx_prime.Rd | 21 ++++-- GWnorm-1.0.2/GWnorm/man/I_GtoC_G.Rd | 5 - GWnorm-1.0.2/GWnorm/man/check_prime_connected.Rd | 2 24 files changed, 139 insertions(+), 121 deletions(-)
Title: Package Documentation Websites with 'Quarto', 'Docsify',
'Docute', or 'MkDocs'
Description: This is a simple and powerful package to create, render, preview,
and deploy documentation websites for 'R' packages. It is a lightweight and
flexible alternative to 'pkgdown', with support for many documentation
generators, including 'Quarto', 'Docute', 'Docsify', and 'MkDocs'.
Author: Etienne Bacher [aut, cre, cph],
Vincent Arel-Bundock [aut]
Maintainer: Etienne Bacher <etienne.bacher@protonmail.com>
Diff between altdoc versions 0.7.2 dated 2026-03-02 and 0.7.3 dated 2026-07-07
DESCRIPTION | 8 +- MD5 | 14 ++-- NEWS.md | 4 + R/utils.R | 7 -- README.md | 61 +++++++------------ tests/testthat/_snaps/docsify/render_docs/index.html | 2 tests/testthat/examples/testpkg.lifecycle/R/foo.R | 1 tests/testthat/helper.R | 16 ---- 8 files changed, 40 insertions(+), 73 deletions(-)
Title: Interface to 'Zenodo' REST API
Description: Provides an Interface to 'Zenodo' (<https://zenodo.org>) REST API,
including management of depositions, attribution of DOIs by 'Zenodo' and
upload and download of files.
Author: Emmanuel Blondel [aut, cre] ,
Julien Barde [ctb] ,
Stephen Eglen [ctb] ,
Hans Van Calster [ctb] ,
Floris Vanderhaeghe [ctb] ,
Jemma Stachelek [ctb] ,
Collin Schwantes [ctb] ,
Nicholas Tierney [ctb]
Maintainer: Emmanuel Blondel <emmanuel.blondel1@gmail.com>
Diff between zen4R versions 0.10.5 dated 2026-03-30 and 0.10.6 dated 2026-07-07
DESCRIPTION | 8 ++++---- MD5 | 14 +++++++------- NEWS.md | 12 +++++++++--- R/ZenodoRecord.R | 2 +- README.md | 2 +- inst/doc/zen4R.Rmd | 28 ++++++++++++++-------------- inst/doc/zen4R.html | 28 ++++++++++++++-------------- vignettes/zen4R.Rmd | 28 ++++++++++++++-------------- 8 files changed, 64 insertions(+), 58 deletions(-)
Title: Nowcasting with Chain-Ladder Method
Description: Nowcasting using the Chain-Ladder method. Supports both non-cumulative delay-based estimation and model-based completeness fitting (e.g., using logistic or Gompertz curves) to predict final counts from partially reported data.
Author: Mathias Leroy [aut, cre],
Finlay Campbell [aut]
Maintainer: Mathias Leroy <mathias.leroy.rpkg@gmail.com>
Diff between nowcastr versions 0.2.0 dated 2026-04-16 and 0.2.1 dated 2026-07-07
nowcastr-0.2.0/nowcastr/R/explore_nowcast.R |only nowcastr-0.2.0/nowcastr/man/explore_nowcast.Rd |only nowcastr-0.2.0/nowcastr/man/plot_millipede.Rd |only nowcastr-0.2.0/nowcastr/man/plot_triangle.Rd |only nowcastr-0.2.1/nowcastr/DESCRIPTION | 9 nowcastr-0.2.1/nowcastr/MD5 | 63 + nowcastr-0.2.1/nowcastr/NAMESPACE | 6 nowcastr-0.2.1/nowcastr/NEWS.md | 18 nowcastr-0.2.1/nowcastr/R/nowcast_cl.R | 31 nowcastr-0.2.1/nowcastr/R/nowcast_eval.R | 245 +++---- nowcastr-0.2.1/nowcastr/R/nowcast_explore.R |only nowcastr-0.2.1/nowcastr/R/plot.R | 195 ++---- nowcastr-0.2.1/nowcastr/R/tbl_models_stats.R |only nowcastr-0.2.1/nowcastr/R/theme_nowcastr.R |only nowcastr-0.2.1/nowcastr/R/utils.R | 7 nowcastr-0.2.1/nowcastr/README.md | 172 +---- nowcastr-0.2.1/nowcastr/build/vignette.rds |binary nowcastr-0.2.1/nowcastr/inst/doc/eval.R | 163 ++++- nowcastr-0.2.1/nowcastr/inst/doc/eval.html | 322 +++++++--- nowcastr-0.2.1/nowcastr/inst/doc/eval.qmd | 206 +++++- nowcastr-0.2.1/nowcastr/inst/doc/nowcastr.R | 69 +- nowcastr-0.2.1/nowcastr/inst/doc/nowcastr.html | 138 ++-- nowcastr-0.2.1/nowcastr/inst/doc/nowcastr.qmd | 99 +-- nowcastr-0.2.1/nowcastr/man/generate_test_data.Rd | 2 nowcastr-0.2.1/nowcastr/man/nowcast_cl.Rd | 6 nowcastr-0.2.1/nowcastr/man/nowcast_eval.Rd | 17 nowcastr-0.2.1/nowcastr/man/nowcast_eval_results.Rd | 68 +- nowcastr-0.2.1/nowcastr/man/nowcast_explore.Rd |only nowcastr-0.2.1/nowcastr/man/plot_nowcast_eval.Rd | 6 nowcastr-0.2.1/nowcastr/man/plot_nowcast_eval_by_delay.Rd | 7 nowcastr-0.2.1/nowcastr/man/plot_nowcast_eval_detail.Rd | 4 nowcastr-0.2.1/nowcastr/man/rm_repeated_values.Rd | 5 nowcastr-0.2.1/nowcastr/man/tbl_models_stats.Rd |only nowcastr-0.2.1/nowcastr/man/theme_nowcastr.Rd |only nowcastr-0.2.1/nowcastr/tests/testthat/test-eval.R | 8 nowcastr-0.2.1/nowcastr/tests/testthat/test-tbl_model_stats.R |only nowcastr-0.2.1/nowcastr/vignettes/eval.qmd | 206 +++++- nowcastr-0.2.1/nowcastr/vignettes/nowcastr.qmd | 99 +-- 38 files changed, 1346 insertions(+), 825 deletions(-)
Title: Minorization-Maximization via Assembly-Decomposition Technology
Description: A formula-driven framework for maximizing target functions
via the minorization-maximization (MM) algorithm. The package
represents the target as a symbolic expression tree, infers its
curvature via disciplined-convex-programming rules, and constructs
a separable surrogate at each iterate using only Jensen's
inequality and the supporting hyperplane. The driver maximizes the
surrogate via block-coordinate Newton with line search, falling
back to a multivariate step on any non-separable residue. A
formula interface accepts standard R expressions (including
`sum()` reductions and `X %*% theta` design-matrix products) so
statistical models such as Poisson regression can be written in
one line.
Author: Xifen Huang [aut],
Jinfeng Xu [aut],
Jiaqi Gu [aut, cre]
Maintainer: Jiaqi Gu <jiaqigu@usf.edu>
Diff between MMAD versions 2.0.1 dated 2026-03-12 and 3.0.0 dated 2026-07-07
MMAD-2.0.1/MMAD/R/Exponential.R |only MMAD-2.0.1/MMAD/R/Function_construction.R |only MMAD-2.0.1/MMAD/R/Function_evaluation.R |only MMAD-2.0.1/MMAD/R/Function_minorization.R |only MMAD-2.0.1/MMAD/R/Gradient_Exponential.R |only MMAD-2.0.1/MMAD/R/Gradient_Linear_combination.R |only MMAD-2.0.1/MMAD/R/Gradient_Logarithmic.R |only MMAD-2.0.1/MMAD/R/Gradient_Logarithmic_one_minus.R |only MMAD-2.0.1/MMAD/R/Gradient_Power.R |only MMAD-2.0.1/MMAD/R/Hessian_Exponential.R |only MMAD-2.0.1/MMAD/R/Hessian_Linear_combination.R |only MMAD-2.0.1/MMAD/R/Hessian_Logarithmic.R |only MMAD-2.0.1/MMAD/R/Hessian_Logarithmic_one_minus.R |only MMAD-2.0.1/MMAD/R/Hessian_Power.R |only MMAD-2.0.1/MMAD/R/Linear_combination.R |only MMAD-2.0.1/MMAD/R/Logarithmic.R |only MMAD-2.0.1/MMAD/R/Logarithmic_one_minus.R |only MMAD-2.0.1/MMAD/R/MMAD.R |only MMAD-2.0.1/MMAD/R/Power.R |only MMAD-2.0.1/MMAD/R/convexity.R |only MMAD-2.0.1/MMAD/R/is_natural_number.R |only MMAD-2.0.1/MMAD/man/Function_construction.Rd |only MMAD-2.0.1/MMAD/man/Function_evaluation.Rd |only MMAD-2.0.1/MMAD/man/Function_minorization.Rd |only MMAD-2.0.1/MMAD/man/MMAD.Rd |only MMAD-2.0.1/MMAD/tests/testthat/test-Function_evaluation.R |only MMAD-2.0.1/MMAD/tests/testthat/test-Function_minorization.R |only MMAD-2.0.1/MMAD/tests/testthat/test-MMAD.R |only MMAD-3.0.0/MMAD/DESCRIPTION | 29 +++-- MMAD-3.0.0/MMAD/MD5 | 65 ++++++------ MMAD-3.0.0/MMAD/NAMESPACE | 30 ++++- MMAD-3.0.0/MMAD/R/MMAD-package.R |only MMAD-3.0.0/MMAD/R/atoms.R |only MMAD-3.0.0/MMAD/R/dcp.R |only MMAD-3.0.0/MMAD/R/evaluate_expr.R |only MMAD-3.0.0/MMAD/R/expr.R |only MMAD-3.0.0/MMAD/R/function_check.R |only MMAD-3.0.0/MMAD/R/minorize.R |only MMAD-3.0.0/MMAD/R/mmad_driver.R |only MMAD-3.0.0/MMAD/R/parse_formula.R |only MMAD-3.0.0/MMAD/man/Function_check.Rd |only MMAD-3.0.0/MMAD/man/MMAD-package.Rd |only MMAD-3.0.0/MMAD/man/Math.mmad_expr.Rd |only MMAD-3.0.0/MMAD/man/Ops.mmad_expr.Rd |only MMAD-3.0.0/MMAD/man/as_mmad_expr.Rd |only MMAD-3.0.0/MMAD/man/curvature.Rd |only MMAD-3.0.0/MMAD/man/evaluate_expr.Rd |only MMAD-3.0.0/MMAD/man/is_dcp.Rd |only MMAD-3.0.0/MMAD/man/minorize_at.Rd |only MMAD-3.0.0/MMAD/man/mmad.Rd |only MMAD-3.0.0/MMAD/man/mmad_atom_names.Rd |only MMAD-3.0.0/MMAD/man/mmad_call.Rd |only MMAD-3.0.0/MMAD/man/mmad_const.Rd |only MMAD-3.0.0/MMAD/man/mmad_var.Rd |only MMAD-3.0.0/MMAD/man/register_atom.Rd |only MMAD-3.0.0/MMAD/man/sign_of.Rd |only MMAD-3.0.0/MMAD/man/simplify_expr.Rd |only MMAD-3.0.0/MMAD/tests/testthat/test-dcp.R |only MMAD-3.0.0/MMAD/tests/testthat/test-expr.R |only MMAD-3.0.0/MMAD/tests/testthat/test-formula.R |only MMAD-3.0.0/MMAD/tests/testthat/test-function_check.R |only MMAD-3.0.0/MMAD/tests/testthat/test-minorize.R |only MMAD-3.0.0/MMAD/tests/testthat/test-mmad-formula.R |only MMAD-3.0.0/MMAD/tests/testthat/test-mmad_driver.R |only 64 files changed, 80 insertions(+), 44 deletions(-)
Title: Client for 'LaminDB'
Description: Interact with 'LaminDB'. 'LaminDB' is an open-source data
framework for biology. This package allows you to query and download
data from 'LaminDB' instances.
Author: Robrecht Cannoodt [aut, cre] ,
Luke Zappia [aut] ,
Data Intuitive [aut],
Lamin Labs [aut, cph]
Maintainer: Robrecht Cannoodt <robrecht@lamin.ai>
Diff between laminr versions 1.3.0 dated 2026-03-13 and 1.3.1 dated 2026-07-07
DESCRIPTION | 11 - MD5 | 75 ++++----- R/Artifact.R | 7 R/BasicQuerySet.R | 3 R/CallableWrappedPythonObject.R | 12 + R/Collection.R | 3 R/Registry.R | 7 R/Transform.R | 3 R/WrappedPythonObject.R | 7 R/arguments.R | 32 +++- R/checks.R | 283 ++++++++++++++++++++++++------------ R/file_loaders.R | 8 - R/file_openers.R | 7 R/help.R | 6 R/import.R | 27 ++- R/install.R | 14 + R/lamin_cli.R | 53 ++++-- R/lamindb.R | 14 + R/packages.R | 112 ++++++++------ R/require.R | 35 +++- R/reticulate-utils.R | 7 R/save_active_file.R | 4 R/status.R | 5 R/temporary-instance.R | 17 +- R/ui.R | 8 - R/utils.R | 61 +++---- R/view.R | 3 R/wrap-python.R | 60 ++++++- R/zzz.R | 8 - build/vignette.rds |binary man/import_module.Rd | 8 - man/laminr-package.Rd | 1 man/require_module.Rd | 4 tests/testthat/setup.R | 5 tests/testthat/test-BasicQuerySet.R | 4 tests/testthat/test-arguments.R |only tests/testthat/test-checks.R | 1 tests/testthat/test-install.R | 4 tests/testthat/test-wrap-python.R | 5 39 files changed, 605 insertions(+), 319 deletions(-)
Title: Indices of Effect Size
Description: Provide utilities to work with indices of effect size for a wide
variety of models and hypothesis tests (see list of supported models using
the function 'insight::supported_models()'), allowing computation of and
conversion between indices such as Cohen's d, r, odds, etc.
References: Ben-Shachar et al. (2020) <doi:10.21105/joss.02815>.
Author: Mattan S. Ben-Shachar [aut, cre] ,
Dominique Makowski [aut] ,
Daniel Luedecke [aut] ,
Indrajeet Patil [aut] ,
Brenton M. Wiernik [aut] ,
Remi Theriault [aut] ,
Ken Kelley [ctb],
David Stanley [ctb],
Aaron Caldwell [ctb] ,
Jessica Burnett [rev] ,
Johan [...truncated...]
Maintainer: Mattan S. Ben-Shachar <mattansb@msbstats.info>
Diff between effectsize versions 1.0.2 dated 2026-03-11 and 1.0.3 dated 2026-07-07
DESCRIPTION | 12 MD5 | 106 +- NEWS.md | 8 R/common_language.R | 2 R/convert_between_common_language.R | 6 R/eta_squared-main.R | 2 R/eta_squared-methods.R | 1122 +++++++++++------------ R/interpret.R | 2 R/rank_diff.R | 591 ++++++------ build/partial.rdb |binary build/vignette.rds |binary inst/doc/anovaES.html | 3 inst/doc/convert_p_OR_RR.html | 3 inst/doc/convert_r_d_OR.html | 6 inst/doc/effectsize.html | 27 inst/doc/from_test_statistics.R | 24 inst/doc/from_test_statistics.Rmd | 29 inst/doc/from_test_statistics.html | 50 - inst/doc/interpret.html | 39 inst/doc/statistical_power.R | 32 inst/doc/statistical_power.html | 41 man/F_to_eta2.Rd | 6 man/Music_preferences.Rd | 2 man/Music_preferences2.Rd | 2 man/RCT_table.Rd | 2 man/Smoking_FASD.Rd | 2 man/chisq_to_phi.Rd | 6 man/cohens_d.Rd | 12 man/cohens_g.Rd | 6 man/d_to_r.Rd | 10 man/diff_to_cles.Rd | 12 man/effectsize-package.Rd | 1 man/eta2_to_f2.Rd | 10 man/eta_squared.Rd | 4 man/food_class.Rd | 2 man/hardlyworking.Rd | 2 man/mahalanobis_d.Rd | 12 man/means_ratio.Rd | 12 man/odds_to_probs.Rd | 12 man/oddsratio.Rd | 6 man/oddsratio_to_riskratio.Rd | 10 man/p_superiority.Rd | 18 man/phi.Rd | 6 man/preferences2025.Rd | 2 man/rank_biserial.Rd | 19 man/rank_epsilon_squared.Rd | 10 man/reexports.Rd | 8 man/repeated_measures_d.Rd | 12 man/rouder2016.Rd | 2 man/screening_test.Rd | 2 man/t_to_r.Rd | 6 man/w_to_fei.Rd | 10 tests/testthat/test-eta_squared.R | 1741 ++++++++++++++++++------------------ vignettes/from_test_statistics.Rmd | 29 54 files changed, 2089 insertions(+), 2012 deletions(-)
Title: Derivatives of the First-Passage Time Density and Cumulative
Distribution Function, and Random Sampling from the (Truncated)
First-Passage Time Distribution
Description: First, we provide functions to calculate the partial derivative of the first-passage time diffusion probability density function (PDF) and cumulative
distribution function (CDF) with respect to the first-passage time t (only for PDF), the upper barrier a, the drift rate v, the relative starting point w, the
non-decision time t0, the inter-trial variability of the drift rate sv, the inter-trial variability of the rel. starting point sw, and the inter-trial variability
of the non-decision time st0. In addition the PDF and CDF themselves are also provided. Most calculations are done on the logarithmic scale to make it more stable.
Since the PDF, CDF, and their derivatives are represented as infinite series, we give the user the option to control the approximation errors with the argument
'precision'. For the numerical integration we used the C library cubature by Johnson, S. G. (2005-2013) <https://github.com/stevengj/cubature>. Numerical integration is
required whenever sv, sw, and [...truncated...]
Author: Raphael Hartmann [aut, cre],
Karl C. Klauer [cph, aut, ctb, ths],
Steven G. Johnson [ctb],
Jean M. Linhart [ctb],
Brian Gough [ctb],
Gerard Jungman [ctb],
Rudolf Schuerer [ctb],
Przemyslaw Sliwa [ctb],
Jason H. Stover [ctb]
Maintainer: Raphael Hartmann <raphael.hartmann@protonmail.com>
Diff between WienR versions 0.3-15 dated 2023-11-29 and 0.3-17 dated 2026-07-07
DESCRIPTION | 8 +- MD5 | 75 +++++++++++++------------ NAMESPACE | 3 + R/WienerQuant.R |only R/print_Wiener.R | 10 +++ build/partial.rdb |binary inst |only man/WienerCDF.Rd | 4 - man/WienerPDF.Rd | 4 - man/WienerQuant.Rd |only man/daWienerCDF.Rd | 2 man/daWienerPDF.Rd | 2 man/ddWDM.Rd | 2 man/dpWDM.Rd | 2 man/dst0WienerCDF.Rd | 2 man/dst0WienerPDF.Rd | 2 man/dsvWienerCDF.Rd | 2 man/dsvWienerPDF.Rd | 2 man/dswWienerCDF.Rd | 2 man/dswWienerPDF.Rd | 2 man/dt0WienerCDF.Rd | 2 man/dt0WienerPDF.Rd | 2 man/dtWienerPDF.Rd | 2 man/dvWienerCDF.Rd | 2 man/dvWienerPDF.Rd | 2 man/dwWienerCDF.Rd | 2 man/dwWienerPDF.Rd | 2 man/gradWienerCDF.Rd | 2 man/gradWienerPDF.Rd | 2 src/Makevars | 2 src/Makevars.win | 2 src/R_wrapper.cpp | 139 +++++++++++++++++++++++++++++++++++++++++++++++ src/WienR_init.c | 7 ++ src/cdf_fncs.cpp | 36 ++++++++++++ src/cdf_fncs.h | 3 + src/derivs.cpp | 149 +++++++++++++++++++++++++++++++++++++++++---------- src/derivs.h | 4 + src/fncs_seven.cpp | 35 +++++++++++ src/fncs_seven.h | 2 src/methods.cpp | 39 +++++++------ 40 files changed, 447 insertions(+), 113 deletions(-)
Title: External jars for 'rjdverse' R Packages
Description: It provides external jars required for the 'rjdverse' (as 'rjd3toolkit', 'rjd3x13' and 'rjd3tramoseats').
Author: Tanguy Barthelemy [aut, cre]
Maintainer: Tanguy Barthelemy <timeserieswithjdemetraandr@gmail.com>
Diff between rjd3jars versions 0.0.4 dated 2026-07-03 and 0.0.5 dated 2026-07-07
DESCRIPTION | 12 +- MD5 | 26 +++-- NAMESPACE | 20 ++-- NEWS.md | 112 +++++++++++++----------- R/rjd3jars-package.R |only R/utils.R | 11 +- R/zzz.R | 8 + README.md | 82 +++++++++--------- inst/WORDLIST | 202 ++++++++++++++++++++++----------------------- java/README | 12 +- man/java-version.Rd | 76 ++++++++-------- man/reload_dictionaries.Rd | 38 ++++---- man/reload_safactories.Rd | 32 +++---- man/reload_tsproviders.Rd | 38 ++++---- man/rjd3jars-package.Rd |only 15 files changed, 342 insertions(+), 327 deletions(-)
Title: Import, Manipulate and Explore the Results of an 'Antares'
Simulation
Description: Import, manipulate and explore results generated by 'Antares', a
powerful open source software developed by RTE (Réseau de Transport d’Électricité) to simulate and study electric power systems
(more information about 'Antares' here : <https://antares-simulator.org/>).
Author: Tatiana Vargas [aut, cre],
Jalal-Edine ZAWAM [aut],
Frederic Breant [ctb],
Francois Guillem [aut],
Benoit Thieurmel [aut],
Titouan Robert [aut],
Victor Perrier [ctb],
Etienne Sanchez [ctb],
Assil Mansouri [ctb],
Clement Berthet [ctb],
Kamel Kemiha [c [...truncated...]
Maintainer: Tatiana Vargas <tatiana.vargas@rte-france.com>
Diff between antaresRead versions 3.0.1 dated 2026-05-28 and 3.1.0 dated 2026-07-07
DESCRIPTION | 6 LICENSE | 2 MD5 | 320 NAMESPACE | 256 NEWS.md | 1572 +-- R/API-methods.R | 486 - R/aggregateResult.R | 4434 +++++----- R/antaresRead-package.R | 14 R/asAntaresDataList.R | 140 R/asAntaresDataTable.R | 102 R/changeTimeStep.R | 410 R/copyToClipboard.R | 172 R/digest.R | 296 R/extractDataList.R | 206 R/getAreas.R | 186 R/getGeographicTrimming.R | 98 R/getLinks.R | 254 R/getNtcOutput.R | 48 R/giveSize.R | 528 - R/groupByDistrict.R | 170 R/hvdcModification.R | 226 R/importInput.R | 1050 +- R/importOutput.R | 3102 +++--- R/ponderateMcAggregation.R | 84 R/readAntares.R | 1974 ++-- R/readAntaresClusters.R | 182 R/readBindingConstraints.R | 842 - R/readClusterDesc.R | 668 - R/readIniFile.R | 330 R/readInputClusters.R | 498 - R/readInputTS.R | 390 R/readLayout.R | 374 R/read_st_constraints.R | 570 - R/removeVirtualAreas.R | 1284 +- R/reorderCols.R | 100 R/setHvdcAreas.R | 110 R/setSimulationPath.R | 1468 +-- R/setSimulationPathAPI.R | 1069 +- R/showAliases.R | 196 R/simOptions.R | 118 R/subset.R | 264 R/thematic_trimming.R | 344 R/utils.R | 12 R/utils_api.R | 204 R/viewAntares.R | 108 R/zzz.R | 390 build/vignette.rds |binary inst/API/demo_api.R | 414 inst/API/demo_api_enr.R | 388 inst/ENR_cluster/test_clusters_enr.R | 184 inst/doc/antaresRead.Rmd | 316 inst/doc/antaresRead.html | 1029 +- inst/format_output/h5Struct.csv | 522 - inst/format_output/simulation_variables_names_by_support.csv | 22 inst/format_output/tableOutput.csv | 502 - inst/format_output/tableOutput_aggreg.csv | 594 - inst/format_output/tableOutput_aggreg_v8.csv | 674 - inst/referential_properties/cluster_properties.csv | 114 inst/test_files/antares_version_files/antares_version_float.antares | 12 inst/test_files/antares_version_files/antares_version_float_2digit.antares | 12 inst/variables_selection/ref_thematic_by_version/api_ref_conversion.csv | 204 inst/variables_selection/ref_thematic_by_version/ref_880.csv | 234 inst/variables_selection/ref_thematic_by_version/ref_920.csv | 180 inst/variables_selection/ref_thematic_by_version/ref_930.csv | 148 inst/variables_selection/variables_thematic_by_version.csv | 98 man/API-methods.Rd | 154 man/aggregatate_mc_all.Rd | 130 man/antaresRead-package.Rd | 91 man/as.antaresDataList.Rd | 98 man/as.antaresDataTable.Rd | 70 man/changeTimeStep.Rd | 104 man/copyToClipboard.Rd | 88 man/dot-download_api_aggregate_result.Rd | 44 man/dot-filter_bindingConstraints_by_names.Rd | 38 man/dot-transform_antares_version.Rd | 36 man/dot-writeIni.Rd | 58 man/extractDataList.Rd | 56 man/figures/badge_api_no.svg | 38 man/figures/badge_api_ok.svg | 38 man/getAreas.Rd | 128 man/getGeographicTrimming.Rd | 42 man/getLinks.Rd | 178 man/getThematicTrimming.Rd | 66 man/hvdcModification.Rd | 64 man/list_thematic_variables.Rd | 48 man/mergeDigests.Rd | 46 man/ponderateMcAggregation.Rd | 60 man/read-ini.Rd | 122 man/readAntares.Rd | 480 - man/readAntaresAreas.Rd | 118 man/readAntaresClusters.Rd | 74 man/readAntaresSTClusters.Rd | 74 man/readBindingConstraints.Rd | 170 man/readClusterDesc.Rd | 196 man/readDigestFile.Rd | 40 man/readInputRES.Rd | 96 man/readInputTS.Rd | 234 man/readInputThermal.Rd | 128 man/readLayout.Rd | 100 man/readOptimCriteria.Rd | 62 man/read_storages_constraints.Rd | 72 man/removeVirtualAreas.Rd | 338 man/setAlias.Rd | 122 man/setHvdcAreas.Rd | 64 man/setSimulationPath.Rd | 412 man/setTimeoutAPI.Rd | 54 man/simOptions.Rd | 102 man/subset.antaresDataList.Rd | 100 man/summary.bindingConstraints.Rd | 40 man/viewAntares.Rd | 66 man/writeDigest.Rd | 46 tests/testthat.R | 34 tests/testthat/helper_init.R | 262 tests/testthat/test-.timeIdToDate.R | 118 tests/testthat/test-API.R | 46 tests/testthat/test-RemoveInputColumn.R | 88 tests/testthat/test-aggregateResult.R | 72 tests/testthat/test-aliases.R | 86 tests/testthat/test-asAntaresData.R | 140 tests/testthat/test-changeTimeStep.R | 102 tests/testthat/test-digest.R | 70 tests/testthat/test-extractDataList.R | 78 tests/testthat/test-getAreas.R | 106 tests/testthat/test-getGeographicTrimming.R | 30 tests/testthat/test-getLinks.R | 50 tests/testthat/test-getStartDate.R | 506 - tests/testthat/test-giveSize.R | 388 tests/testthat/test-groupByDistrict.R | 50 tests/testthat/test-hvdcModification.R | 62 tests/testthat/test-importOutput.R | 416 tests/testthat/test-importOutputForClusters.R | 126 tests/testthat/test-mcaggreg.R | 110 tests/testthat/test-opts-api.R | 80 tests/testthat/test-ponderate.R | 110 tests/testthat/test-ponderateMcAggregation.R | 26 tests/testthat/test-print.R | 86 tests/testthat/test-readAntares.R | 676 - tests/testthat/test-readAntaresClusters.R | 64 tests/testthat/test-readAntares_STclusters.R | 106 tests/testthat/test-readAntares_bc.R | 32 tests/testthat/test-readAntares_districts.R | 74 tests/testthat/test-readAntares_inputs.R | 128 tests/testthat/test-readAntares_mustRun.R | 154 tests/testthat/test-readAntares_time_columns.R | 64 tests/testthat/test-readBindingConstraints.R | 740 - tests/testthat/test-readClusterDesc.R | 1048 +- tests/testthat/test-readIni.R | 48 tests/testthat/test-readInputAPI.R | 38 tests/testthat/test-readInputClusters.R | 242 tests/testthat/test-readInputTS.R | 566 - tests/testthat/test-readLayout.R | 84 tests/testthat/test-read_optim_criteria.R | 34 tests/testthat/test-read_st_constraints.R | 679 - tests/testthat/test-removeVirtualAreas.R | 976 +- tests/testthat/test-setHvdcAreas.R | 48 tests/testthat/test-setSimulationPath.R | 603 - tests/testthat/test-setSimulationPathAPI.R | 115 tests/testthat/test-subset_antaresDataList.R | 158 tests/testthat/test-thematic_timming.R | 1124 +- tests/testthat/test-viewAntares.R | 90 vignettes/antaresRead.Rmd | 316 161 files changed, 23904 insertions(+), 23834 deletions(-)
Title: Removal of Unwanted Technical Variation from UK Biobank NMR
Metabolomics Biomarker Data
Description: A suite of utilities for working with the UK Biobank
<https://www.ukbiobank.ac.uk/> Nuclear Magnetic Resonance spectroscopy (NMR)
metabolomics data <https://biobank.ndph.ox.ac.uk/showcase/label.cgi?id=220>.
Includes functions for extracting biomarkers from decoded UK Biobank field
data, removing unwanted technical variation from biomarker concentrations,
computing an extended set of lipid, fatty acid, and cholesterol fractions,
and for re-deriving composite biomarkers and ratios after adjusting data
for unwanted biological variation. For further details on methods see
Ritchie SC et al. Sci Data (2023) <doi:10.1038/s41597-023-01949-y>.
Author: Scott C Ritchie [aut, cre]
Maintainer: Scott C Ritchie <sritchie73@gmail.com>
Diff between ukbnmr versions 3.3.2 dated 2026-04-12 and 3.4 dated 2026-07-07
DESCRIPTION | 8 MD5 | 38 - NAMESPACE | 2 NEWS.md | 13 R/compute_biomarkers_internal.R | 126 +++++ R/compute_biomarkers_user.R | 82 ++- R/compute_qc_flags_internal.R | 127 +++++ R/compute_qc_flags_user.R | 79 ++- R/data.R | 12 R/ukbnmr.R | 47 + data/nmr_info.rda |binary inst/CITATION | 17 inst/extdata/nmr_info.csv | 673 +++++++++++++-------------- man/compute_extended_ratio_qc_flags.Rd | 11 man/compute_extended_ratios.Rd | 10 man/compute_lipoprotein_fatty_acids.Rd |only man/compute_lipoprotein_fatty_acids_flags.Rd |only man/nmr_info.Rd | 12 man/recompute_derived_biomarker_qc_flags.Rd | 11 man/recompute_derived_biomarkers.Rd | 6 man/ukbnmr.Rd | 54 +- 21 files changed, 914 insertions(+), 414 deletions(-)
Title: Trait Specific Gene Selection using SVM and GA
Description: Obtaining relevant set of trait specific genes from gene expression data is important for clinical diagnosis of disease and discovery of disease mechanisms in plants and animals. This process involves identification of relevant genes and removal of redundant genes as much as possible from a whole gene set. This package returns the trait specific gene set from the high dimensional RNA-seq count data by applying combination of two conventional machine learning algorithms, support vector machine (SVM) and genetic algorithm (GA). GA is used to control and optimize the subset of genes sent to the SVM for classification and evaluation. Genetic algorithm uses repeated learning steps and cross validation over number of possible solution and selects the best. The algorithm selects the set of genes based on a fitness function that is obtained via support vector machines. Using SVM as the classifier performance and the genetic algorithm for feature selection, a set of trait specific gene set is o [...truncated...]
Author: Md. Samir Farooqi [aut],
K.K. Chaturvedi [aut],
D.C. Mishra [aut],
Sudhir Srivastava [cre, aut]
Maintainer: Sudhir Srivastava <sudhir0401bm@gmail.com>
Diff between TSGS versions 1.0 dated 2021-09-08 and 1.0.1 dated 2026-07-07
DESCRIPTION | 16 ++++++++-------- MD5 | 2 +- 2 files changed, 9 insertions(+), 9 deletions(-)
Title: Discrete Log-Gaussian Cox Processes for Aggregated Disease
Counts
Description: Fits a spatially discrete approximation to a log-Gaussian Cox process
model for spatially aggregated disease count data, estimated by Monte Carlo
Maximum Likelihood as in Christensen (2004) <doi:10.1198/106186004X2525> and
Johnson, Diggle and Giorgi (2019) <doi:10.1002/sim.8339>. Performance-critical
steps (aggregated correlation assembly, Metropolis-adjusted Langevin
algorithm (MALA) sampling, the Monte Carlo likelihood, and the
Kronecker-structured space-time likelihood) are implemented in
C++ via 'RcppArmadillo'. Provides a one-line, 'glm'-like interface and
statistical extensions including a nugget term, general 'Matern' smoothness,
raster and misaligned covariates, restricted spatial regression,
importance-sampling diagnostics and re-anchored Monte Carlo maximum
likelihood (MCML).
Author: Olatunji Johnson [aut, cre],
Emanuele Giorgi [aut],
Peter Diggle [aut]
Maintainer: Olatunji Johnson <olatunjijohnson21111@gmail.com>
Diff between SDALGCP2 versions 0.1.0 dated 2026-07-02 and 0.1.1 dated 2026-07-07
DESCRIPTION | 20 +++--- MD5 | 18 +++--- NEWS.md | 16 +++++ R/SDALGCP2-package.R | 2 R/zzz.R |only inst/doc/SDALGCP2-intro.R | 7 ++ inst/doc/SDALGCP2-intro.Rmd | 9 +++ inst/doc/SDALGCP2-intro.html | 129 +++++++++++++++++++++---------------------- man/SDALGCP2-package.Rd | 2 man/set_omp_num_threads.Rd |only vignettes/SDALGCP2-intro.Rmd | 9 +++ 11 files changed, 128 insertions(+), 84 deletions(-)
Title: Fast Local Indicators of Spatial Association (LISA)
Description: Computes various Local Indicators of Spatial Association (LISA)
statistics, including univariate and bivariate local Moran's I,
Empirical Bayes local Moran's I, univariate and multivariate local
Geary's C, and Getis-Ord G and G* statistics. The methods follow
Anselin (1995), Getis and Ord (1992), and Anselin (2019). Leverages a
high-performance, plain-C backend with optional 'OpenMP' multi-core
support for fast permutation-based pseudo-p-value calculation. Accepts any
'spdep' listw spatial weight matrix, including custom and
non-contiguity weights. Uses sample standardisation (n-1) and
'rgeoda'-style permutation p-values. Output cluster codes match 'rgeoda'
conventions, including the Isolated category for observations without
neighbours.
Author: Lizhong Chen [aut, cre]
Maintainer: Lizhong Chen <chen.l@wehi.edu.au>
Diff between fastLISA versions 1.0.0 dated 2026-07-06 and 1.0.1 dated 2026-07-07
DESCRIPTION | 10 ++++++---- MD5 | 44 ++++++++++++++++++++++---------------------- NEWS.md | 15 ++++++++++++--- R/local_g.R | 2 ++ R/local_geary.R | 2 ++ R/local_gstar.R | 3 ++- R/local_moran.R | 3 ++- R/local_moran_bv.R | 2 ++ R/local_moran_eb.R | 1 + R/local_multigeary.R | 2 ++ README.md | 9 +++++---- inst/doc/fastLISA.Rnw | 8 +++++--- inst/doc/fastLISA.pdf |binary man/local_g.Rd | 11 +++++++---- man/local_geary.Rd | 11 +++++++---- man/local_gstar.Rd | 11 +++++++---- man/local_moran.Rd | 11 +++++++---- man/local_moran_bv.Rd | 11 +++++++---- man/local_moran_eb.Rd | 11 +++++++---- man/local_multigeary.Rd | 11 +++++++---- src/fastLISA.h | 8 ++++++-- src/init.c | 3 +-- vignettes/fastLISA.Rnw | 8 +++++--- 23 files changed, 124 insertions(+), 73 deletions(-)
Title: Functions for Tabular Reporting
Description: Use a grammar for creating and customizing pretty tables.
The following formats are supported: 'HTML', 'PDF', 'Typst', 'RTF',
'Microsoft Word', 'Microsoft PowerPoint', R 'Grid Graphics' and
'patchwork'. 'R Markdown', 'Quarto' and the package 'officer' can be
used to produce the result files. The syntax is the same for the user
regardless of the type of output to be produced. A set of functions
allows the creation, definition of cell arrangement, addition of
headers or footers, formatting and definition of cell content with
text and or images. The package also offers a set of high-level
functions that allow tabular reporting of statistical models and the
creation of complex cross tabulations.
Author: David Gohel [aut, cre],
ArData [cph],
Clementine Jager [ctb],
Eli Daniels [ctb],
Panagiotis Skintzos [aut],
Quentin Fazilleau [ctb],
Maxim Nazarov [ctb],
Titouan Robert [ctb],
Michael Barrowman [ctb],
Atsushi Yasumoto [ctb],
Paul Julian [ctb],
Sean B [...truncated...]
Maintainer: David Gohel <david.gohel@ardata.fr>
Diff between flextable versions 0.9.12 dated 2026-06-02 and 0.10.0 dated 2026-07-07
DESCRIPTION | 22 MD5 | 180 ++--- NAMESPACE | 4 NEWS.md | 24 R/01_fpstruct.R | 6 R/05_content.R | 18 R/chunk_images.R | 141 +--- R/flextable.R | 1 R/grid_funs.R | 25 R/grid_grobs.R | 73 +- R/html_str.R | 118 +++ R/latex_chunks.R | 20 R/latex_str.R | 46 + R/printers.R | 201 +++++- R/read_structure.R | 76 ++ R/runs_as_functions.R | 26 R/styles.R | 96 ++ R/typst_str.R |only README.md | 4 build/vignette.rds |binary inst/_extensions/flextable-qmd/flextable-qmd.lua | 25 man/align.Rd | 1 man/as_image.Rd | 4 man/as_qmd.Rd | 2 man/as_word_field.Rd | 2 man/bg.Rd | 1 man/bold.Rd | 1 man/color.Rd | 1 man/df_printer.Rd | 1 man/empty_blanks.Rd | 1 man/flextable.Rd | 1 man/flextable_to_rmd.Rd | 1 man/font.Rd | 1 man/fontsize.Rd | 1 man/gen_grob.Rd | 1 man/gg_chunk.Rd | 4 man/grid_chunk.Rd | 4 man/highlight.Rd | 1 man/htmltools_value.Rd | 1 man/hyperlink_text.Rd | 4 man/indentation.Rd |only man/italic.Rd | 1 man/keep_with_next.Rd | 1 man/knit_print.flextable.Rd | 11 man/line_spacing.Rd | 1 man/linerange.Rd | 4 man/minibar.Rd | 4 man/note_docx_images.Rd |only man/padding.Rd | 1 man/plot.flextable.Rd | 1 man/plot_chunk.Rd | 4 man/print.flextable.Rd | 1 man/repair_docx.Rd |only man/rotate.Rd | 1 man/save_as_docx.Rd | 1 man/save_as_html.Rd | 1 man/save_as_image.Rd | 1 man/save_as_pptx.Rd | 1 man/save_as_rtf.Rd | 1 man/save_as_typst.Rd |only man/style.Rd | 1 man/tab_settings.Rd | 1 man/to_html.flextable.Rd | 1 man/use_flextable_qmd.Rd | 10 man/valign.Rd | 1 man/wrap_flextable.Rd | 1 tests/testthat/setup.R | 9 tests/testthat/test-as_flextable.R | 739 ++++++++++++++++++----- tests/testthat/test-captions-rmd.R | 60 + tests/testthat/test-cell_content.R | 339 ++++++++-- tests/testthat/test-clintables.R | 68 +- tests/testthat/test-df_printer.R | 9 tests/testthat/test-dimensions.R | 39 - tests/testthat/test-docx-images.R |only tests/testthat/test-errors.R | 22 tests/testthat/test-footers.R | 43 + tests/testthat/test-footnote.R | 125 ++- tests/testthat/test-gen_grob.R | 114 ++- tests/testthat/test-headers.R | 91 ++ tests/testthat/test-images.R | 222 ++++-- tests/testthat/test-indentation.R |only tests/testthat/test-keep_next.R | 25 tests/testthat/test-merge.R | 12 tests/testthat/test-misc.R | 74 +- tests/testthat/test-new-rows.R | 202 +++--- tests/testthat/test-padding.R | 16 tests/testthat/test-pptx-tables.R | 7 tests/testthat/test-proc-freq.R | 309 ++++++++- tests/testthat/test-quarto.R | 21 tests/testthat/test-rotations.R | 5 tests/testthat/test-styles.R | 52 + tests/testthat/test-tab_settings.R | 37 - tests/testthat/test-text.R | 179 ++++- tests/testthat/test-themes.R | 14 tests/testthat/test-typst.R |only 95 files changed, 3043 insertions(+), 979 deletions(-)
Title: Tests for Departure from Normality
Description: A toolkit for assessing data normality using a comprehensive collection of statistical methods.
It includes descriptive measures and formal hypothesis tests, such as skewness and kurtosis tests,
the Anderson–Darling test, the Shapiro–Wilk test, and the D'Agostino–Pearson K2 omnibus test.
Author: Joon-Keat Lai [aut, cre, cph]
Maintainer: Joon-Keat Lai <p10911004@gmail.com>
Diff between normality versions 0.0.1 dated 2026-06-09 and 0.0.3 dated 2026-07-07
normality-0.0.1/normality/R/DAgostino-Pearson_test.R |only normality-0.0.1/normality/R/zzz_standard-output.R |only normality-0.0.1/normality/data/cholesterol.rda |only normality-0.0.1/normality/data/leghorn_chick.rda |only normality-0.0.1/normality/man/cholesterol.Rd |only normality-0.0.1/normality/man/dot-Shapiro_Francia.Rd |only normality-0.0.1/normality/man/leghorn_chick.Rd |only normality-0.0.3/normality/DESCRIPTION | 8 normality-0.0.3/normality/MD5 | 63 - normality-0.0.3/normality/NAMESPACE | 6 normality-0.0.3/normality/NEWS.md | 14 normality-0.0.3/normality/R/Anderson_Darling_test.R | 195 ++-- normality-0.0.3/normality/R/D.Agostino_Pearson_test.R |only normality-0.0.3/normality/R/Jarque_Bera_test.R |only normality-0.0.3/normality/R/Lilliefors_test.R |only normality-0.0.3/normality/R/Shapiro_Wilk_test.R | 434 +++++++++- normality-0.0.3/normality/R/check_normality.R |only normality-0.0.3/normality/R/data.R | 39 normality-0.0.3/normality/R/globals.R |only normality-0.0.3/normality/R/is_normal.R |only normality-0.0.3/normality/R/kurtosis.R | 108 +- normality-0.0.3/normality/R/skewness.R | 108 +- normality-0.0.3/normality/R/utils.R |only normality-0.0.3/normality/README.md | 53 - normality-0.0.3/normality/data/Shapiro_Wilk_coef_table.rda |only normality-0.0.3/normality/data/Shapiro_Wilk_pval_table.rda |only normality-0.0.3/normality/man/Anderson_Darling_test.Rd | 52 - normality-0.0.3/normality/man/D.Agostino_Pearson_test.Rd | 57 - normality-0.0.3/normality/man/Jarque_Bera_test.Rd |only normality-0.0.3/normality/man/Lilliefors_test.Rd |only normality-0.0.3/normality/man/Shapiro_Wilk_coef_table.Rd |only normality-0.0.3/normality/man/Shapiro_Wilk_pval_table.Rd |only normality-0.0.3/normality/man/Shapiro_Wilk_test.Rd |only normality-0.0.3/normality/man/check_normality.Rd |only normality-0.0.3/normality/man/is_normal.Rd |only normality-0.0.3/normality/man/is_tied.Rd |only normality-0.0.3/normality/man/kurtosis.Rd | 49 - normality-0.0.3/normality/man/normality_standard_output.Rd | 12 normality-0.0.3/normality/man/skewness.Rd | 49 - normality-0.0.3/normality/tests/testthat/test-Anderson_Darling_test.R | 32 normality-0.0.3/normality/tests/testthat/test-D.Agostino_Pearson_test.R | 42 normality-0.0.3/normality/tests/testthat/test-Jarque_Bera_test.R |only normality-0.0.3/normality/tests/testthat/test-Shapiro_Wilk_test.R |only normality-0.0.3/normality/tests/testthat/test-check_normality.R |only normality-0.0.3/normality/tests/testthat/test-kurtosis.R | 24 normality-0.0.3/normality/tests/testthat/test-skewness.R | 20 46 files changed, 974 insertions(+), 391 deletions(-)
More information about nonprobsampling at CRAN
Permanent link
Title: Fast and Flexible Implementations of Exploratory Factor Analysis
Tools
Description: Provides functions to perform exploratory factor analysis (EFA) procedures and compare their solutions. The goal is to provide state-of-the-art factor retention methods and a high degree of flexibility in the EFA procedures. This way, for example, implementations from R 'psych' and 'SPSS' can be compared. Moreover, functions for Schmid-Leiman transformation and the computation of omegas are provided. To speed up the analyses, some of the iterative procedures, like principal axis factoring (PAF), are implemented in C++.
Author: Markus Steiner [aut, cre] ,
Silvia Steiner [aut] ,
William Revelle [ctb],
Max Auerswald [ctb],
Morten Moshagen [ctb],
John Ruscio [ctb],
Brendan Roche [ctb],
Urbano Lorenzo-Seva [ctb],
David Navarro-Gonzalez [ctb],
Johan Braeken [ctb],
Andreas Soteri [...truncated...]
Maintainer: Markus Steiner <markus.d.steiner@gmail.com>
Diff between EFAtools versions 0.7.1 dated 2026-05-08 and 0.8.0 dated 2026-07-07
EFAtools-0.7.1/EFAtools/R/ROTATE_OBLQ.R |only EFAtools-0.7.1/EFAtools/R/ROTATE_ORTH.R |only EFAtools-0.7.1/EFAtools/R/plot.CD.R |only EFAtools-0.7.1/EFAtools/R/plot.EKC.R |only EFAtools-0.7.1/EFAtools/R/plot.HULL.R |only EFAtools-0.7.1/EFAtools/R/plot.KGC.R |only EFAtools-0.7.1/EFAtools/R/plot.PARALLEL.R |only EFAtools-0.7.1/EFAtools/R/plot.SCREE.R |only EFAtools-0.7.1/EFAtools/R/print.CD.R |only EFAtools-0.7.1/EFAtools/R/print.EKC.R |only EFAtools-0.7.1/EFAtools/R/print.HULL.R |only EFAtools-0.7.1/EFAtools/R/print.KGC.R |only EFAtools-0.7.1/EFAtools/R/print.MAP.R |only EFAtools-0.7.1/EFAtools/R/print.NEST.R |only EFAtools-0.7.1/EFAtools/R/print.N_FACTORS.R |only EFAtools-0.7.1/EFAtools/R/print.PARALLEL.R |only EFAtools-0.7.1/EFAtools/R/print.SCREE.R |only EFAtools-0.7.1/EFAtools/R/print.SMT.R |only EFAtools-0.7.1/EFAtools/R/utils-pipe.R |only EFAtools-0.7.1/EFAtools/man/CONSENSUS_PROCRUSTES.Rd |only EFAtools-0.7.1/EFAtools/man/dot-calc_cis.Rd |only EFAtools-0.7.1/EFAtools/man/dot-nest_sym.Rd |only EFAtools-0.7.1/EFAtools/man/dot-numformat.Rd |only EFAtools-0.7.1/EFAtools/man/dot-stat_over_list.Rd |only EFAtools-0.7.1/EFAtools/man/pipe.Rd |only EFAtools-0.7.1/EFAtools/man/plot.CD.Rd |only EFAtools-0.7.1/EFAtools/man/plot.EKC.Rd |only EFAtools-0.7.1/EFAtools/man/plot.HULL.Rd |only EFAtools-0.7.1/EFAtools/man/plot.KGC.Rd |only EFAtools-0.7.1/EFAtools/man/plot.PARALLEL.Rd |only EFAtools-0.7.1/EFAtools/man/plot.SCREE.Rd |only EFAtools-0.7.1/EFAtools/man/print.CD.Rd |only EFAtools-0.7.1/EFAtools/man/print.EKC.Rd |only EFAtools-0.7.1/EFAtools/man/print.HULL.Rd |only EFAtools-0.7.1/EFAtools/man/print.KGC.Rd |only EFAtools-0.7.1/EFAtools/man/print.MAP.Rd |only EFAtools-0.7.1/EFAtools/man/print.NEST.Rd |only EFAtools-0.7.1/EFAtools/man/print.PARALLEL.Rd |only EFAtools-0.7.1/EFAtools/man/print.SCREE.Rd |only EFAtools-0.7.1/EFAtools/man/print.SMT.Rd |only EFAtools-0.7.1/EFAtools/src/ml_helper.cpp |only EFAtools-0.7.1/EFAtools/src/nest_sym.cpp |only EFAtools-0.7.1/EFAtools/src/uls_helper.cpp |only EFAtools-0.8.0/EFAtools/DESCRIPTION | 36 EFAtools-0.8.0/EFAtools/MD5 | 481 - EFAtools-0.8.0/EFAtools/NAMESPACE | 58 EFAtools-0.8.0/EFAtools/NEWS.md | 145 EFAtools-0.8.0/EFAtools/R/BARTLETT.R | 92 EFAtools-0.8.0/EFAtools/R/CD.R | 285 EFAtools-0.8.0/EFAtools/R/COMPARE.R | 250 EFAtools-0.8.0/EFAtools/R/DOSPERT_doc.R | 4 EFAtools-0.8.0/EFAtools/R/DOSPERT_raw_doc.R | 2 EFAtools-0.8.0/EFAtools/R/DWLS.R |only EFAtools-0.8.0/EFAtools/R/EFA.R | 2380 ++++- EFAtools-0.8.0/EFAtools/R/EFA_AVERAGE.R | 485 - EFAtools-0.8.0/EFAtools/R/EFA_POOLED.R | 1925 +++- EFAtools-0.8.0/EFAtools/R/EKC.R | 200 EFAtools-0.8.0/EFAtools/R/FACTOR_SCORES.R | 234 EFAtools-0.8.0/EFAtools/R/GRiPS_raw_doc.R | 2 EFAtools-0.8.0/EFAtools/R/HULL.R | 473 - EFAtools-0.8.0/EFAtools/R/IDS2_R_doc.R | 2 EFAtools-0.8.0/EFAtools/R/KGC.R | 192 EFAtools-0.8.0/EFAtools/R/KMO.R | 116 EFAtools-0.8.0/EFAtools/R/MAP.R | 185 EFAtools-0.8.0/EFAtools/R/ML.R | 128 EFAtools-0.8.0/EFAtools/R/NEST.R | 204 EFAtools-0.8.0/EFAtools/R/N_FACTORS.R | 688 - EFAtools-0.8.0/EFAtools/R/OMEGA.R | 233 EFAtools-0.8.0/EFAtools/R/OMEGA_helper.R | 1078 +- EFAtools-0.8.0/EFAtools/R/PAF.R | 226 EFAtools-0.8.0/EFAtools/R/PARALLEL.R | 401 EFAtools-0.8.0/EFAtools/R/PROCRUSTES.R | 146 EFAtools-0.8.0/EFAtools/R/PROMAX.R | 364 EFAtools-0.8.0/EFAtools/R/RcppExports.R | 688 + EFAtools-0.8.0/EFAtools/R/SCREE.R | 158 EFAtools-0.8.0/EFAtools/R/SL.R | 153 EFAtools-0.8.0/EFAtools/R/SMT.R | 227 EFAtools-0.8.0/EFAtools/R/SPSS_23_doc.R | 10 EFAtools-0.8.0/EFAtools/R/SPSS_27_doc.R | 10 EFAtools-0.8.0/EFAtools/R/ULS.R | 96 EFAtools-0.8.0/EFAtools/R/UPPS_raw_doc.R | 2 EFAtools-0.8.0/EFAtools/R/VARIMAX.R | 169 EFAtools-0.8.0/EFAtools/R/alignment.R |only EFAtools-0.8.0/EFAtools/R/averaging.R |only EFAtools-0.8.0/EFAtools/R/cor-input.R |only EFAtools-0.8.0/EFAtools/R/efa_group.R |only EFAtools-0.8.0/EFAtools/R/efa_power.R |only EFAtools-0.8.0/EFAtools/R/efa_reliability.R |only EFAtools-0.8.0/EFAtools/R/efa_retention.R |only EFAtools-0.8.0/EFAtools/R/efa_scores.R |only EFAtools-0.8.0/EFAtools/R/efa_screen.R |only EFAtools-0.8.0/EFAtools/R/efa_simulate.R |only EFAtools-0.8.0/EFAtools/R/estimate_model.R |only EFAtools-0.8.0/EFAtools/R/fiml-moments.R |only EFAtools-0.8.0/EFAtools/R/fit-indices.R |only EFAtools-0.8.0/EFAtools/R/format-helpers.R |only EFAtools-0.8.0/EFAtools/R/helper.R | 2143 ----- EFAtools-0.8.0/EFAtools/R/plot.COMPARE.R |only EFAtools-0.8.0/EFAtools/R/plot.EFA_AVERAGE.R | 32 EFAtools-0.8.0/EFAtools/R/plot.efa_group.R |only EFAtools-0.8.0/EFAtools/R/plot.efa_power.R |only EFAtools-0.8.0/EFAtools/R/polychoric.R |only EFAtools-0.8.0/EFAtools/R/population_models_doc.R | 20 EFAtools-0.8.0/EFAtools/R/presets.R |only EFAtools-0.8.0/EFAtools/R/print.BARTLETT.R | 108 EFAtools-0.8.0/EFAtools/R/print.COMPARE.R | 276 EFAtools-0.8.0/EFAtools/R/print.EFA.R | 4222 +++++----- EFAtools-0.8.0/EFAtools/R/print.EFA_AVERAGE.R | 514 - EFAtools-0.8.0/EFAtools/R/print.KMO.R | 161 EFAtools-0.8.0/EFAtools/R/print.LOADINGS.R | 883 -- EFAtools-0.8.0/EFAtools/R/print.OMEGA.R | 276 EFAtools-0.8.0/EFAtools/R/print.SL.R | 124 EFAtools-0.8.0/EFAtools/R/print.SLLOADINGS.R | 139 EFAtools-0.8.0/EFAtools/R/print.efa_group.R |only EFAtools-0.8.0/EFAtools/R/print.efa_reliability.R |only EFAtools-0.8.0/EFAtools/R/print.efa_screen.R |only EFAtools-0.8.0/EFAtools/R/print.efa_simulated.R |only EFAtools-0.8.0/EFAtools/R/procrustes-consensus.R |only EFAtools-0.8.0/EFAtools/R/residuals.EFA.R | 80 EFAtools-0.8.0/EFAtools/R/rotate_model.R |only EFAtools-0.8.0/EFAtools/R/se-fiml.R |only EFAtools-0.8.0/EFAtools/R/test_models_doc.R | 16 EFAtools-0.8.0/EFAtools/README.md | 1145 ++ EFAtools-0.8.0/EFAtools/build/partial.rdb |only EFAtools-0.8.0/EFAtools/inst/doc/EFAtools.Rmd | 4 EFAtools-0.8.0/EFAtools/inst/doc/EFAtools.html | 1861 +--- EFAtools-0.8.0/EFAtools/inst/doc/Replicate_SPSS_psych.html | 1156 +- EFAtools-0.8.0/EFAtools/man/BARTLETT.Rd | 31 EFAtools-0.8.0/EFAtools/man/CD.Rd | 70 EFAtools-0.8.0/EFAtools/man/COMPARE.Rd | 36 EFAtools-0.8.0/EFAtools/man/EFA.Rd | 630 + EFAtools-0.8.0/EFAtools/man/EFA_AVERAGE.Rd | 134 EFAtools-0.8.0/EFAtools/man/EFA_POOLED.Rd | 352 EFAtools-0.8.0/EFAtools/man/EFAtools-package.Rd | 5 EFAtools-0.8.0/EFAtools/man/EKC.Rd | 118 EFAtools-0.8.0/EFAtools/man/FACTOR_SCORES.Rd | 70 EFAtools-0.8.0/EFAtools/man/HULL.Rd | 115 EFAtools-0.8.0/EFAtools/man/IDS2_R.Rd | 30 EFAtools-0.8.0/EFAtools/man/KGC.Rd | 52 EFAtools-0.8.0/EFAtools/man/KMO.Rd | 35 EFAtools-0.8.0/EFAtools/man/MAP.Rd | 99 EFAtools-0.8.0/EFAtools/man/NEST.Rd | 69 EFAtools-0.8.0/EFAtools/man/N_FACTORS.Rd | 131 EFAtools-0.8.0/EFAtools/man/OMEGA.Rd | 93 EFAtools-0.8.0/EFAtools/man/PARALLEL.Rd | 101 EFAtools-0.8.0/EFAtools/man/PROCRUSTES.Rd | 57 EFAtools-0.8.0/EFAtools/man/SCREE.Rd | 39 EFAtools-0.8.0/EFAtools/man/SL.Rd | 39 EFAtools-0.8.0/EFAtools/man/SMT.Rd | 55 EFAtools-0.8.0/EFAtools/man/SPSS_23.Rd | 28 EFAtools-0.8.0/EFAtools/man/SPSS_27.Rd | 28 EFAtools-0.8.0/EFAtools/man/UPPS_raw.Rd | 4 EFAtools-0.8.0/EFAtools/man/WJIV_ages_14_19.Rd | 98 EFAtools-0.8.0/EFAtools/man/WJIV_ages_20_39.Rd | 98 EFAtools-0.8.0/EFAtools/man/WJIV_ages_3_5.Rd | 62 EFAtools-0.8.0/EFAtools/man/WJIV_ages_40_90.Rd | 98 EFAtools-0.8.0/EFAtools/man/WJIV_ages_6_8.Rd | 98 EFAtools-0.8.0/EFAtools/man/WJIV_ages_9_13.Rd | 98 EFAtools-0.8.0/EFAtools/man/dot-average_matrices.Rd | 34 EFAtools-0.8.0/EFAtools/man/dot-change_class.Rd | 2 EFAtools-0.8.0/EFAtools/man/dot-compute_vars.Rd | 8 EFAtools-0.8.0/EFAtools/man/dot-consensus_loss.Rd | 38 EFAtools-0.8.0/EFAtools/man/dot-consensus_target_procrustes_single.Rd | 169 EFAtools-0.8.0/EFAtools/man/dot-extract_list_object.Rd | 6 EFAtools-0.8.0/EFAtools/man/dot-gpa_consensus_target.Rd |only EFAtools-0.8.0/EFAtools/man/dot-hyperplane_count.Rd | 42 EFAtools-0.8.0/EFAtools/man/dot-oblique_procrustes.Rd | 49 EFAtools-0.8.0/EFAtools/man/dot-oblique_procrustes_batch.Rd |only EFAtools-0.8.0/EFAtools/man/dot-orthogonal_procrustes.Rd | 50 EFAtools-0.8.0/EFAtools/man/dot-parallel_sim.Rd | 2 EFAtools-0.8.0/EFAtools/man/dot-rotate_bentler_oblq.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_bentler_orth.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_bifactor_oblq.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_bifactor_orth.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_cf_orth.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_geomin_oblq.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_geomin_orth.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_oblimin.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotate_simplimax_oblq.Rd |only EFAtools-0.8.0/EFAtools/man/dot-rotation_se_jacobian.Rd |only EFAtools-0.8.0/EFAtools/man/dot-simulate_cfm_eigen.Rd |only EFAtools-0.8.0/EFAtools/man/dot-simulate_cfm_mvn.Rd |only EFAtools-0.8.0/EFAtools/man/dot-tucker_congruence.Rd | 52 EFAtools-0.8.0/EFAtools/man/efa_group.Rd 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EFAtools-0.8.0/EFAtools/man/print.BARTLETT.Rd | 29 EFAtools-0.8.0/EFAtools/man/print.COMPARE.Rd | 32 EFAtools-0.8.0/EFAtools/man/print.EFA.Rd | 223 EFAtools-0.8.0/EFAtools/man/print.EFA_AVERAGE.Rd | 32 EFAtools-0.8.0/EFAtools/man/print.KMO.Rd | 25 EFAtools-0.8.0/EFAtools/man/print.LOADINGS.Rd | 29 EFAtools-0.8.0/EFAtools/man/print.N_FACTORS.Rd | 19 EFAtools-0.8.0/EFAtools/man/print.OMEGA.Rd | 35 EFAtools-0.8.0/EFAtools/man/print.SL.Rd | 27 EFAtools-0.8.0/EFAtools/man/print.SLLOADINGS.Rd | 18 EFAtools-0.8.0/EFAtools/man/print.efa_group.Rd |only EFAtools-0.8.0/EFAtools/man/print.efa_power.Rd |only EFAtools-0.8.0/EFAtools/man/print.efa_reliability.Rd |only EFAtools-0.8.0/EFAtools/man/print.efa_retention.Rd |only EFAtools-0.8.0/EFAtools/man/print.efa_scores.Rd |only EFAtools-0.8.0/EFAtools/man/print.efa_screen.Rd |only EFAtools-0.8.0/EFAtools/man/print.efa_simulated.Rd |only EFAtools-0.8.0/EFAtools/man/residuals.EFA.Rd | 27 EFAtools-0.8.0/EFAtools/man/test_models.Rd | 20 EFAtools-0.8.0/EFAtools/src/Makevars | 3 EFAtools-0.8.0/EFAtools/src/Makevars.win | 3 EFAtools-0.8.0/EFAtools/src/RcppExports.cpp | 433 - EFAtools-0.8.0/EFAtools/src/estimate.cpp |only EFAtools-0.8.0/EFAtools/src/factor_corres.cpp | 15 EFAtools-0.8.0/EFAtools/src/gpf_common.h |only EFAtools-0.8.0/EFAtools/src/gpf_engine.h |only EFAtools-0.8.0/EFAtools/src/oblique_procrustes.cpp | 723 - EFAtools-0.8.0/EFAtools/src/paf_iter.cpp | 400 EFAtools-0.8.0/EFAtools/src/parallel.cpp | 406 EFAtools-0.8.0/EFAtools/src/polychoric.cpp |only EFAtools-0.8.0/EFAtools/src/rotate.cpp |only EFAtools-0.8.0/EFAtools/src/sim.cpp |only EFAtools-0.8.0/EFAtools/tests/testthat/_snaps |only EFAtools-0.8.0/EFAtools/tests/testthat/helper-efa_retention.R |only EFAtools-0.8.0/EFAtools/tests/testthat/helper-slow.R |only EFAtools-0.8.0/EFAtools/tests/testthat/helper-snapshot.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-BARTLETT.R | 84 EFAtools-0.8.0/EFAtools/tests/testthat/test-CD.R | 74 EFAtools-0.8.0/EFAtools/tests/testthat/test-COMPARE.R | 436 - EFAtools-0.8.0/EFAtools/tests/testthat/test-DWLS.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA-boot.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA-fields.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA-fiml.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA-vcov-slot.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA.R | 447 - EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_AVERAGE-fiml.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_AVERAGE-grid.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_AVERAGE.R | 316 EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED-cfi-scale.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED-k1-oblique.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED-mi2s.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED-routing.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED-rubin-rotated.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED-rubin-unrot-procrustes.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED-rubin-unrot.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EFA_POOLED.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-EKC.R | 71 EFAtools-0.8.0/EFAtools/tests/testthat/test-FACTOR_SCORES.R | 95 EFAtools-0.8.0/EFAtools/tests/testthat/test-HULL.R | 278 EFAtools-0.8.0/EFAtools/tests/testthat/test-KGC.R | 81 EFAtools-0.8.0/EFAtools/tests/testthat/test-KMO.R | 46 EFAtools-0.8.0/EFAtools/tests/testthat/test-MAP.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-ML.R | 72 EFAtools-0.8.0/EFAtools/tests/testthat/test-NEST.R | 268 EFAtools-0.8.0/EFAtools/tests/testthat/test-N_FACTORS.R | 171 EFAtools-0.8.0/EFAtools/tests/testthat/test-OMEGA.R | 182 EFAtools-0.8.0/EFAtools/tests/testthat/test-OMEGA_helper.R | 289 EFAtools-0.8.0/EFAtools/tests/testthat/test-PAF.R | 236 EFAtools-0.8.0/EFAtools/tests/testthat/test-PARALLEL.R | 325 EFAtools-0.8.0/EFAtools/tests/testthat/test-PROCRUSTES.R | 103 EFAtools-0.8.0/EFAtools/tests/testthat/test-PROMAX.R | 81 EFAtools-0.8.0/EFAtools/tests/testthat/test-ROTATE_OBLQ.R | 286 EFAtools-0.8.0/EFAtools/tests/testthat/test-ROTATE_ORTH.R | 158 EFAtools-0.8.0/EFAtools/tests/testthat/test-RcppExports.R | 10 EFAtools-0.8.0/EFAtools/tests/testthat/test-SCREE.R | 60 EFAtools-0.8.0/EFAtools/tests/testthat/test-SL.R | 147 EFAtools-0.8.0/EFAtools/tests/testthat/test-SMT.R | 306 EFAtools-0.8.0/EFAtools/tests/testthat/test-ULS.R | 97 EFAtools-0.8.0/EFAtools/tests/testthat/test-VARIMAX.R | 58 EFAtools-0.8.0/EFAtools/tests/testthat/test-cor-method-poly.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-efa_group.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-efa_power.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-efa_reliability.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-efa_retention.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-efa_scores.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-efa_screen.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-efa_simulate.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-factor_score_diagnostics.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-factor_score_weights.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-fiml-acov.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-fiml-moments.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-format-loadings.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-helper.R | 537 - EFAtools-0.8.0/EFAtools/tests/testthat/test-plot-retention.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-polychoric.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-prepare_cor_input.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-presets.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-procrustes-consensus.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-regression-estimators.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-regression-rotations.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-reliability_adapters.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-reliability_core.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-reliability_result.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-se-information.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-se-sandwich.R |only EFAtools-0.8.0/EFAtools/tests/testthat/test-snapshots.R |only EFAtools-0.8.0/EFAtools/vignettes/EFAtools.Rmd | 4 309 files changed, 20845 insertions(+), 16205 deletions(-)
Title: Analyse Citation Data from Google Scholar
Description: Provides tools to retrieve, analyse, and format publication and
citation data from Google Scholar profiles. It supports profile lookup,
publication records, citation histories, scholar comparison, coauthor
networks, journal ranking queries, CV-ready publication lists, and citation
metric summaries.
Author: Guangchuang Yu [aut, cre] ,
James Keirstead [aut],
Gregory Jefferis [aut] ,
Gordon Getzinger [ctb],
Jorge Cimentada [ctb],
Max Czapanskiy [ctb],
Dominique Makowski [ctb]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between scholar versions 0.2.6 dated 2026-02-26 and 1.0.0 dated 2026-07-07
scholar-0.2.6/scholar/R/sysdata.rda |only scholar-0.2.6/scholar/inst/doc/scholar.Rmd |only scholar-0.2.6/scholar/vignettes/scholar.Rmd |only scholar-1.0.0/scholar/DESCRIPTION | 20 scholar-1.0.0/scholar/MD5 | 63 scholar-1.0.0/scholar/NAMESPACE | 5 scholar-1.0.0/scholar/NEWS.md | 18 scholar-1.0.0/scholar/R/coauthors.R | 223 +- scholar-1.0.0/scholar/R/format_publications.R | 9 scholar-1.0.0/scholar/R/getCompleteAuthors.R | 38 scholar-1.0.0/scholar/R/predict.r | 41 scholar-1.0.0/scholar/R/publications.r | 213 ++ scholar-1.0.0/scholar/R/scholar.r | 247 ++- scholar-1.0.0/scholar/R/utils.R | 138 + scholar-1.0.0/scholar/build/partial.rdb |binary scholar-1.0.0/scholar/build/vignette.rds |binary scholar-1.0.0/scholar/inst/WORDLIST | 22 scholar-1.0.0/scholar/inst/doc/scholar.R | 160 +- scholar-1.0.0/scholar/inst/doc/scholar.html | 767 +++++----- scholar-1.0.0/scholar/inst/doc/scholar.qmd |only scholar-1.0.0/scholar/man/format_publications.Rd | 2 scholar-1.0.0/scholar/man/get_coauthors.Rd | 5 scholar-1.0.0/scholar/man/get_journalrank.Rd | 69 scholar-1.0.0/scholar/man/get_profile.Rd | 2 scholar-1.0.0/scholar/man/get_publication_abstract.Rd | 42 scholar-1.0.0/scholar/man/get_publication_metrics.Rd |only scholar-1.0.0/scholar/man/get_publications_all_authors.Rd |only scholar-1.0.0/scholar/man/get_scholar_metrics.Rd |only scholar-1.0.0/scholar/man/scholar-package.Rd | 1 scholar-1.0.0/scholar/man/search_scholar_ids.Rd |only scholar-1.0.0/scholar/tests/testthat/test-author-position.R |only scholar-1.0.0/scholar/tests/testthat/test-citation-history.R |only scholar-1.0.0/scholar/tests/testthat/test-coauthors.R |only scholar-1.0.0/scholar/tests/testthat/test-complete-authors.R |only scholar-1.0.0/scholar/tests/testthat/test-encoding.R |only scholar-1.0.0/scholar/tests/testthat/test-metrics.R |only scholar-1.0.0/scholar/tests/testthat/test-predict.R |only scholar-1.0.0/scholar/tests/testthat/test-publications.R |only scholar-1.0.0/scholar/tests/testthat/test-scholar-id-search.R |only scholar-1.0.0/scholar/tests/testthat/test-scholar-response.R |only scholar-1.0.0/scholar/tests/testthat/test-scholar.R | 111 - scholar-1.0.0/scholar/vignettes/scholar.qmd |only 42 files changed, 1366 insertions(+), 830 deletions(-)
Title: Microbial Community Ecology Data Analysis
Description: A series of data analysis approaches for microbiome data based on the R6 class. The classes are designed for data preprocessing, taxa abundance plotting, alpha diversity analysis, beta diversity analysis, differential abundance test, null model analysis, network analysis, machine learning, environmental data analysis and functional analysis.
Author: Chi Liu [aut, cre],
Felipe R. P. Mansoldo [ctb],
Minjie Yao [ctb],
Xiangzhen Li [ctb]
Maintainer: Chi Liu <liuchi0426@126.com>
Diff between microeco versions 2.2.0 dated 2026-05-14 and 2.3.0 dated 2026-07-07
DESCRIPTION | 18 MD5 | 58 NAMESPACE | 2 R/data.R | 412 ++--- R/help.R | 89 - R/import.R | 40 R/microtable.R | 2018 +++++++++++++------------- R/trans_abund.R | 2070 +++++++++++++------------- R/trans_alpha.R | 2472 ++++++++++++++++---------------- R/trans_beta.R | 2135 +++++++++++++-------------- R/trans_classifier.R | 1632 ++++++++++----------- R/trans_diff.R | 3923 +++++++++++++++++++++++++-------------------------- R/trans_env.R | 3307 +++++++++++++++++++++--------------------- R/trans_func.R | 2143 ++++++++++++++------------- R/trans_metab.R | 1639 ++++++++++----------- R/trans_network.R | 3564 +++++++++++++++++++++++----------------------- R/trans_niche.R |only R/trans_norm.R | 15 R/trans_phylo.R |only R/trans_venn.R | 1264 ++++++++-------- R/utility.R | 1706 +++++++++++----------- inst/CITATION | 12 man/microeco.Rd | 11 man/microtable.Rd | 8 man/trans_alpha.Rd | 2 man/trans_beta.Rd | 2 man/trans_diff.Rd | 6 man/trans_env.Rd | 2 man/trans_metab.Rd | 5 man/trans_network.Rd | 17 man/trans_niche.Rd |only man/trans_phylo.Rd |only 32 files changed, 14338 insertions(+), 14234 deletions(-)
Title: Decorate a 'ggplot' with Associated Information
Description: Supports data-driven composition of a main plot with associated subplots that need precise axis alignment. Unlike general layout-focused tools such as 'cowplot' and 'patchwork', it enables related subplots to be integrated on the top, bottom, left, or right sides of a main plot with matched axes, so that the combined panels can be interpreted as a coherent whole. This design was inspired by the 'Method 2' described in 'ggtree' (G Yu (2018) <doi:10.1093/molbev/msy194>).
Author: Guangchuang Yu [aut, cre] ,
Shuangbin Xu [ctb] ,
Thomas Hackl [ctb]
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Diff between aplot versions 0.3.0 dated 2026-06-23 and 0.3.1 dated 2026-07-07
DESCRIPTION | 12 - MD5 | 17 +- NAMESPACE | 3 NEWS.md | 6 R/aplot.R | 299 +++++++++++++++++++++---------------- R/guide-area.R |only R/guide-layout.R |only man/aplot-package.Rd | 2 man/set_guide_area.Rd |only man/set_guide_layout.Rd |only tests/testthat/Rplots.pdf |only tests/testthat/test-guide-area.R |only tests/testthat/test-guide-layout.R |only 13 files changed, 203 insertions(+), 136 deletions(-)
Title: High Dimensional Time Series Analysis Tools
Description: An implementation for high-dimensional time series analysis methods, including factor model for vector time series
proposed by Lam and Yao (2012) <doi:10.1214/12-AOS970> and Chang, Guo and Yao (2015)
<doi:10.1016/j.jeconom.2015.03.024>, martingale difference test proposed by
Chang, Jiang and Shao (2023) <doi:10.1016/j.jeconom.2022.09.001>, principal
component analysis for vector time series proposed by Chang, Guo and Yao (2018) <doi:10.1214/17-AOS1613>,
cointegration analysis proposed by Zhang, Robinson and Yao (2019)
<doi:10.1080/01621459.2018.1458620>, unit root test proposed by Chang, Cheng and Yao (2022)
<doi:10.1093/biomet/asab034>, white noise tests proposed by Chang, Yao and Zhou (2017)
<doi:10.1093/biomet/asw066> and Chang et al. (2026+), CP-decomposition for matrix time
series proposed by Chang et al. (2023) <doi:10.1093/jrsssb/qkac011> and
Chang et al. (2026+) <doi:10.48550/arXiv.2410.05634>, CP-decomposition for tensor ti [...truncated...]
Author: Jinyuan Chang [aut],
Jing He [aut],
Chen Lin [aut, cre],
Qiwei Yao [aut]
Maintainer: Chen Lin <linchen@smail.swufe.edu.cn>
Diff between HDTSA versions 1.0.6-1 dated 2026-06-23 and 1.0.6-2 dated 2026-07-07
DESCRIPTION | 12 ++++++------ MD5 | 6 +++--- R/CP_functions_unified.R | 8 ++++++-- R/tools_wntest.R | 1 - 4 files changed, 15 insertions(+), 12 deletions(-)
Title: Artificial Intelligence for Education
Description: In social and educational settings, the use of Artificial
Intelligence (AI) is a challenging task. Relevant data is often only
available in handwritten forms, or the use of data is restricted by
privacy policies. This often leads to small data sets. Furthermore, in
the educational and social sciences, data is often unbalanced in terms
of frequencies. To support educators as well as educational and social
researchers in using the potentials of AI for their work, this package
provides a unified interface for neural nets in 'PyTorch' to deal with
natural language problems. In addition, the package ships with a shiny
app, providing a graphical user interface. This allows the usage of
AI for people without skills in writing python/R scripts. The tools
integrate existing mathematical and statistical methods for dealing
with small data sets via pseudo-labeling (e.g. Cascante-Bonilla et al.
(2020) <doi:10.48550/arXiv.2001.06001>) and imbalanced data via the
creation of synthetic cases [...truncated...]
Author: Berding Florian [aut, cre] ,
Tykhonova Yuliia [aut] ,
Pargmann Julia [ctb] ,
Leube Anna [ctb] ,
Riebenbauer Elisabeth [ctb] ,
Rebmann Karin [ctb],
Slopinski Andreas [ctb]
Maintainer: Berding Florian <florian.berding@uni-hamburg.de>
Diff between aifeducation versions 1.1.5 dated 2026-04-25 and 1.1.6 dated 2026-07-07
aifeducation-1.1.5/aifeducation/inst/python/DataCollatorForMPLM_PT.py |only aifeducation-1.1.5/aifeducation/inst/python/data_collator.py |only aifeducation-1.1.5/aifeducation/tests/testthat/test-02_07_BaseModels_from_hf.R |only aifeducation-1.1.6/aifeducation/DESCRIPTION | 11 aifeducation-1.1.6/aifeducation/MD5 | 436 ++--- aifeducation-1.1.6/aifeducation/NAMESPACE | 8 aifeducation-1.1.6/aifeducation/NEWS.md | 77 - aifeducation-1.1.6/aifeducation/R/Studio_BaseModel_Create.R | 2 aifeducation-1.1.6/aifeducation/R/Studio_BaseModel_Train.R | 2 aifeducation-1.1.6/aifeducation/R/Studio_ErrorModal_ProcessModal.R | 18 aifeducation-1.1.6/aifeducation/R/Studio_ExtendedTasks.R | 7 aifeducation-1.1.6/aifeducation/R/Studio_ProgressModal.R | 2 aifeducation-1.1.6/aifeducation/R/Studio_TextEmbeddingModel_Create.R | 120 + aifeducation-1.1.6/aifeducation/R/def_DocumentationDesc.R | 49 aifeducation-1.1.6/aifeducation/R/def_Object_Management.R | 23 aifeducation-1.1.6/aifeducation/R/def_ParameterDefinitions.R | 165 +- aifeducation-1.1.6/aifeducation/R/install_and_config.R | 174 +- aifeducation-1.1.6/aifeducation/R/obj_AIFEBaseModel.R | 18 aifeducation-1.1.6/aifeducation/R/obj_BaseModelAlbert.R |only aifeducation-1.1.6/aifeducation/R/obj_BaseModelBert.R | 13 aifeducation-1.1.6/aifeducation/R/obj_BaseModelCore.R | 151 + aifeducation-1.1.6/aifeducation/R/obj_BaseModelDebertaV2.R | 9 aifeducation-1.1.6/aifeducation/R/obj_BaseModelDistilBert.R |only aifeducation-1.1.6/aifeducation/R/obj_BaseModelEuroBERT.R |only aifeducation-1.1.6/aifeducation/R/obj_BaseModelFunnel.R | 11 aifeducation-1.1.6/aifeducation/R/obj_BaseModelMPNet.R | 74 aifeducation-1.1.6/aifeducation/R/obj_BaseModelModernBert.R | 20 aifeducation-1.1.6/aifeducation/R/obj_BaseModelRoberta.R | 10 aifeducation-1.1.6/aifeducation/R/obj_BaseModelRobertaXML.R |only aifeducation-1.1.6/aifeducation/R/obj_BaseModelXmod.R |only aifeducation-1.1.6/aifeducation/R/obj_ClassifiersBasedOnTextEmbeddings.R | 194 +- aifeducation-1.1.6/aifeducation/R/obj_DataManager.R | 156 +- aifeducation-1.1.6/aifeducation/R/obj_EmbeddedText.R | 14 aifeducation-1.1.6/aifeducation/R/obj_FeatureExtractor.R | 90 - aifeducation-1.1.6/aifeducation/R/obj_LargeDataSetBase.R | 27 aifeducation-1.1.6/aifeducation/R/obj_LargeDataSetForTextEmbeddings.R | 16 aifeducation-1.1.6/aifeducation/R/obj_ModelsBasedOnTextEmbeddings.R | 267 +++ aifeducation-1.1.6/aifeducation/R/obj_TEClassifierParallel.R | 9 aifeducation-1.1.6/aifeducation/R/obj_TEClassifierParallelPrototype.R | 10 aifeducation-1.1.6/aifeducation/R/obj_TEClassifierProtoNet.R | 9 aifeducation-1.1.6/aifeducation/R/obj_TEClassifierRegular.R | 5 aifeducation-1.1.6/aifeducation/R/obj_TEClassifierSequential.R | 6 aifeducation-1.1.6/aifeducation/R/obj_TEClassifierSequentialPrototype.R | 8 aifeducation-1.1.6/aifeducation/R/obj_TEClassifiersBasedOnProtoNet.R | 117 + aifeducation-1.1.6/aifeducation/R/obj_TEClassifiersBasedOnRegular.R | 14 aifeducation-1.1.6/aifeducation/R/obj_TextEmbeddingModel.R | 80 - aifeducation-1.1.6/aifeducation/R/obj_Tokenizer.R | 162 +- aifeducation-1.1.6/aifeducation/R/onLoad.R | 7 aifeducation-1.1.6/aifeducation/R/saving_and_loading.R | 2 aifeducation-1.1.6/aifeducation/R/utils_DataManager.R | 214 -- aifeducation-1.1.6/aifeducation/R/utils_Studio.R | 6 aifeducation-1.1.6/aifeducation/R/utils_check.R | 2 aifeducation-1.1.6/aifeducation/R/utils_general.R | 131 + aifeducation-1.1.6/aifeducation/R/utils_log.R | 10 aifeducation-1.1.6/aifeducation/R/utils_plot.R | 53 aifeducation-1.1.6/aifeducation/R/utils_python.R | 44 aifeducation-1.1.6/aifeducation/R/utils_python_data_management.R | 23 aifeducation-1.1.6/aifeducation/R/utils_test_that.R | 35 aifeducation-1.1.6/aifeducation/README.md | 9 aifeducation-1.1.6/aifeducation/build/vignette.rds |binary aifeducation-1.1.6/aifeducation/inst/doc/a02_base_model_types.R |only aifeducation-1.1.6/aifeducation/inst/doc/a02_base_model_types.Rmd |only aifeducation-1.1.6/aifeducation/inst/doc/a02_base_model_types.html |only aifeducation-1.1.6/aifeducation/inst/doc/aifeducation.Rmd | 33 aifeducation-1.1.6/aifeducation/inst/doc/aifeducation.html | 59 aifeducation-1.1.6/aifeducation/inst/python/MPNetForMPLM_PT.py | 73 aifeducation-1.1.6/aifeducation/inst/python/__pycache__ |only aifeducation-1.1.6/aifeducation/inst/python/data_collator_factory.py |only aifeducation-1.1.6/aifeducation/inst/python/data_collators.py |only aifeducation-1.1.6/aifeducation/inst/python/py_log.py | 121 + aifeducation-1.1.6/aifeducation/inst/python/pytorch_act_fct.py | 17 aifeducation-1.1.6/aifeducation/inst/python/pytorch_autoencoder.py | 53 aifeducation-1.1.6/aifeducation/inst/python/pytorch_classifier_models.py | 108 - aifeducation-1.1.6/aifeducation/inst/python/pytorch_cls_training_loops.py | 352 +++- aifeducation-1.1.6/aifeducation/inst/python/pytorch_datacollators.py | 6 aifeducation-1.1.6/aifeducation/inst/python/pytorch_distance_fun.py | 48 aifeducation-1.1.6/aifeducation/inst/python/pytorch_layers.py | 96 - aifeducation-1.1.6/aifeducation/inst/python/pytorch_loss_fct.py | 21 aifeducation-1.1.6/aifeducation/inst/python/pytorch_old_scripts.py | 6 aifeducation-1.1.6/aifeducation/inst/python/pytorch_text_embedding_model.py | 13 aifeducation-1.1.6/aifeducation/inst/python/tests |only aifeducation-1.1.6/aifeducation/man/AIFEBaseModel.Rd | 96 - aifeducation-1.1.6/aifeducation/man/AIFEMaster.Rd | 505 +++--- aifeducation-1.1.6/aifeducation/man/BaseModelAlbert.Rd |only aifeducation-1.1.6/aifeducation/man/BaseModelBert.Rd | 195 +- aifeducation-1.1.6/aifeducation/man/BaseModelCore.Rd | 768 +++++----- aifeducation-1.1.6/aifeducation/man/BaseModelDebertaV2.Rd | 193 +- aifeducation-1.1.6/aifeducation/man/BaseModelDistilBERT.Rd |only aifeducation-1.1.6/aifeducation/man/BaseModelEuroBert.Rd |only aifeducation-1.1.6/aifeducation/man/BaseModelFunnel.Rd | 236 +-- aifeducation-1.1.6/aifeducation/man/BaseModelMPNet.Rd | 310 ++-- aifeducation-1.1.6/aifeducation/man/BaseModelModernBert.Rd | 209 +- aifeducation-1.1.6/aifeducation/man/BaseModelRoberta.Rd | 193 +- aifeducation-1.1.6/aifeducation/man/BaseModelRobertaXML.Rd |only aifeducation-1.1.6/aifeducation/man/BaseModelXmod.Rd |only aifeducation-1.1.6/aifeducation/man/BaseModelsIndex.Rd | 23 aifeducation-1.1.6/aifeducation/man/ClassifiersBasedOnTextEmbeddings.Rd | 496 +++--- aifeducation-1.1.6/aifeducation/man/DataManagerClassifier.Rd | 533 +++--- aifeducation-1.1.6/aifeducation/man/DataSetsIndex.Rd | 23 aifeducation-1.1.6/aifeducation/man/EmbeddedText.Rd | 566 +++---- aifeducation-1.1.6/aifeducation/man/HuggingFaceTokenizer.Rd | 147 + aifeducation-1.1.6/aifeducation/man/LargeDataSetBase.Rd | 413 ++--- aifeducation-1.1.6/aifeducation/man/LargeDataSetForText.Rd | 366 ++-- aifeducation-1.1.6/aifeducation/man/LargeDataSetForTextEmbeddings.Rd | 579 +++---- aifeducation-1.1.6/aifeducation/man/ModelsBasedOnTextEmbeddings.Rd | 339 ++-- aifeducation-1.1.6/aifeducation/man/Reliability_Server.Rd | 4 aifeducation-1.1.6/aifeducation/man/Reliability_UI.Rd | 4 aifeducation-1.1.6/aifeducation/man/TEClassifierParallel.Rd | 483 ++++-- aifeducation-1.1.6/aifeducation/man/TEClassifierParallelPrototype.Rd | 501 ++++-- aifeducation-1.1.6/aifeducation/man/TEClassifierProtoNet.Rd | 353 ++-- aifeducation-1.1.6/aifeducation/man/TEClassifierRegular.Rd | 257 +-- aifeducation-1.1.6/aifeducation/man/TEClassifierSequential.Rd | 465 +++--- aifeducation-1.1.6/aifeducation/man/TEClassifierSequentialPrototype.Rd | 483 ++++-- aifeducation-1.1.6/aifeducation/man/TEClassifiersBasedOnProtoNet.Rd | 510 +++--- aifeducation-1.1.6/aifeducation/man/TEClassifiersBasedOnRegular.Rd | 290 ++- aifeducation-1.1.6/aifeducation/man/TEFeatureExtractor.Rd | 444 +++-- aifeducation-1.1.6/aifeducation/man/TextEmbeddingModel.Rd | 648 ++++---- aifeducation-1.1.6/aifeducation/man/TokenizerBase.Rd | 451 +++-- aifeducation-1.1.6/aifeducation/man/TokenizerIndex.Rd | 23 aifeducation-1.1.6/aifeducation/man/WordPieceTokenizer.Rd | 208 +- aifeducation-1.1.6/aifeducation/man/add_missing_args.Rd | 8 aifeducation-1.1.6/aifeducation/man/auto_n_cores.Rd | 20 aifeducation-1.1.6/aifeducation/man/build_documentation_for_model.Rd | 19 aifeducation-1.1.6/aifeducation/man/build_layer_overview_base_models.Rd |only aifeducation-1.1.6/aifeducation/man/build_layer_stack_documentation_for_vignette.Rd | 19 aifeducation-1.1.6/aifeducation/man/calc_standard_classification_measures.Rd | 14 aifeducation-1.1.6/aifeducation/man/calc_tokenizer_statistics.Rd | 4 aifeducation-1.1.6/aifeducation/man/cat_message.Rd | 18 aifeducation-1.1.6/aifeducation/man/check_adjust_n_samples_on_CI.Rd | 18 aifeducation-1.1.6/aifeducation/man/check_aif_py_modules.Rd | 22 aifeducation-1.1.6/aifeducation/man/check_all_args.Rd | 4 aifeducation-1.1.6/aifeducation/man/check_class_and_type.Rd | 4 aifeducation-1.1.6/aifeducation/man/class_vector_to_py_dataset.Rd | 20 aifeducation-1.1.6/aifeducation/man/clean_pytorch_log_transformers.Rd | 18 aifeducation-1.1.6/aifeducation/man/cohens_kappa.Rd | 14 aifeducation-1.1.6/aifeducation/man/create_data_embeddings_description.Rd | 8 aifeducation-1.1.6/aifeducation/man/create_dir.Rd | 4 aifeducation-1.1.6/aifeducation/man/create_object.Rd | 20 aifeducation-1.1.6/aifeducation/man/create_py_dataset_cache_file_path.Rd | 20 aifeducation-1.1.6/aifeducation/man/create_synthetic_units_from_matrix.Rd | 20 aifeducation-1.1.6/aifeducation/man/data.frame_to_py_dataset.Rd | 20 aifeducation-1.1.6/aifeducation/man/doc_formula.Rd | 16 aifeducation-1.1.6/aifeducation/man/extract_column_from_py_dataset.Rd | 20 aifeducation-1.1.6/aifeducation/man/fleiss_kappa.Rd | 14 aifeducation-1.1.6/aifeducation/man/generate_args_for_tests.Rd | 18 aifeducation-1.1.6/aifeducation/man/generate_embeddings.Rd | 18 aifeducation-1.1.6/aifeducation/man/generate_id.Rd | 20 aifeducation-1.1.6/aifeducation/man/generate_tensors.Rd | 18 aifeducation-1.1.6/aifeducation/man/get_TEClassifiers_class_names.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_alpha_3_codes.Rd | 4 aifeducation-1.1.6/aifeducation/man/get_batches_index.Rd | 20 aifeducation-1.1.6/aifeducation/man/get_called_args.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_coder_metrics.Rd | 14 aifeducation-1.1.6/aifeducation/man/get_current_args_for_print.Rd | 18 aifeducation-1.1.6/aifeducation/man/get_depr_obj_names.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_desc_for_core_model_architecture.Rd | 19 aifeducation-1.1.6/aifeducation/man/get_dict_cls_type.Rd | 19 aifeducation-1.1.6/aifeducation/man/get_dict_core_models.Rd | 19 aifeducation-1.1.6/aifeducation/man/get_dict_input_types.Rd | 19 aifeducation-1.1.6/aifeducation/man/get_file_extension.Rd | 4 aifeducation-1.1.6/aifeducation/man/get_fixed_test_tensor.Rd | 18 aifeducation-1.1.6/aifeducation/man/get_layer_dict.Rd | 19 aifeducation-1.1.6/aifeducation/man/get_layer_documentation.Rd | 19 aifeducation-1.1.6/aifeducation/man/get_magnitude_values.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_n_chunks.Rd | 24 aifeducation-1.1.6/aifeducation/man/get_param_def.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_param_dict.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_param_doc_desc.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_parameter_documentation.Rd | 19 aifeducation-1.1.6/aifeducation/man/get_py_package_version.Rd | 10 aifeducation-1.1.6/aifeducation/man/get_py_package_versions.Rd | 16 aifeducation-1.1.6/aifeducation/man/get_recommended_py_versions.Rd | 18 aifeducation-1.1.6/aifeducation/man/get_synthetic_cases_from_matrix.Rd | 20 aifeducation-1.1.6/aifeducation/man/get_test_data_for_classifiers.Rd | 18 aifeducation-1.1.6/aifeducation/man/get_time_stamp.Rd | 20 aifeducation-1.1.6/aifeducation/man/gwet_ac.Rd | 14 aifeducation-1.1.6/aifeducation/man/install_aifeducation.Rd | 18 aifeducation-1.1.6/aifeducation/man/install_aifeducation_studio.Rd | 18 aifeducation-1.1.6/aifeducation/man/install_protocol_buffer_compiler.Rd |only aifeducation-1.1.6/aifeducation/man/install_py_modules.Rd | 18 aifeducation-1.1.6/aifeducation/man/kendalls_w.Rd | 14 aifeducation-1.1.6/aifeducation/man/kripp_alpha.Rd | 14 aifeducation-1.1.6/aifeducation/man/load_all_py_scripts.Rd | 10 aifeducation-1.1.6/aifeducation/man/load_from_disk.Rd | 4 aifeducation-1.1.6/aifeducation/man/load_py_scripts.Rd | 10 aifeducation-1.1.6/aifeducation/man/long_load_target_data.Rd | 8 aifeducation-1.1.6/aifeducation/man/matrix_to_array_c.Rd | 20 aifeducation-1.1.6/aifeducation/man/monitor_test_time_on_CI.Rd | 18 aifeducation-1.1.6/aifeducation/man/output_message.Rd | 18 aifeducation-1.1.6/aifeducation/man/prepare_r_array_for_dataset.Rd | 20 aifeducation-1.1.6/aifeducation/man/prepare_session.Rd | 24 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changed, 10550 insertions(+), 6853 deletions(-)
Title: Visualise and Report 'VALD ForceDecks' Test Results
Description: Provides a 'shiny' dashboard and plotting utilities to explore and
report 'VALD ForceDecks' testing data. Includes interactive modules for
metric exploration, radar charts, longitudinal comparisons, quadrant plots,
and athlete reports.
Author: Kieran Harrison [aut, cre],
VALD Support [ctb],
VALD [cph]
Maintainer: Kieran Harrison <k.harrison@vald.com>
Diff between valdrViz versions 1.0.1 dated 2026-01-20 and 1.0.2 dated 2026-07-07
DESCRIPTION | 6 +++--- MD5 | 28 ++++++++++++++-------------- NAMESPACE | 46 +++++++++++++++++++++++----------------------- R/utils.R | 4 ---- man/REQ.Rd | 32 ++++++++++++++++---------------- man/fd_read_folder.Rd | 38 +++++++++++++++++++------------------- man/fd_standardise.Rd | 32 ++++++++++++++++---------------- man/html_to_pdf.Rd | 36 ++++++++++++++++++------------------ man/metric_pal.Rd | 32 ++++++++++++++++---------------- man/pipe.Rd | 34 +++++++++++++++++----------------- man/read_fd.Rd | 36 ++++++++++++++++++------------------ man/rot_theme.Rd | 32 ++++++++++++++++---------------- man/valdrViz-package.Rd | 44 ++++++++++++++++++++++---------------------- man/viz_theme.Rd | 24 ++++++++++++------------ tests/testthat.R | 24 ++++++++++++------------ 15 files changed, 222 insertions(+), 226 deletions(-)
Title: Publication-Quality 'ggplot2' Themes
Description: Complete themes for publication-quality 'ggplot2' visualisation.
Also provides functions to modify these based on the positional axis scales
and orientation of a particular plot.
Author: David Hodge [aut, cre, cph]
Maintainer: David Hodge <davidhodge931@gmail.com>
Diff between ggrefine versions 0.4.0 dated 2026-05-04 and 0.5.0 dated 2026-07-07
ggrefine-0.4.0/ggrefine/R/classic.R |only ggrefine-0.4.0/ggrefine/R/hybrid.R |only ggrefine-0.4.0/ggrefine/R/minimal.R |only ggrefine-0.4.0/ggrefine/R/modern.R |only ggrefine-0.4.0/ggrefine/R/none.R |only ggrefine-0.4.0/ggrefine/R/theme-dark.R |only ggrefine-0.4.0/ggrefine/R/theme-grey.R |only ggrefine-0.4.0/ggrefine/R/theme-light.R |only ggrefine-0.4.0/ggrefine/R/theme-oat.R |only ggrefine-0.4.0/ggrefine/R/void.R |only ggrefine-0.4.0/ggrefine/man/classic.Rd |only ggrefine-0.4.0/ggrefine/man/hybrid.Rd |only ggrefine-0.4.0/ggrefine/man/minimal.Rd |only ggrefine-0.4.0/ggrefine/man/modern.Rd |only ggrefine-0.4.0/ggrefine/man/none.Rd |only ggrefine-0.4.0/ggrefine/man/theme_oat.Rd |only ggrefine-0.4.0/ggrefine/man/void.Rd |only ggrefine-0.5.0/ggrefine/DESCRIPTION | 13 ggrefine-0.5.0/ggrefine/MD5 | 64 +-- ggrefine-0.5.0/ggrefine/NAMESPACE | 24 - ggrefine-0.5.0/ggrefine/NEWS.md | 7 ggrefine-0.5.0/ggrefine/R/refine.R |only ggrefine-0.5.0/ggrefine/R/theme.R |only ggrefine-0.5.0/ggrefine/README.md | 172 +++++++--- ggrefine-0.5.0/ggrefine/man/classic_drift.Rd |only ggrefine-0.5.0/ggrefine/man/classic_drop.Rd |only ggrefine-0.5.0/ggrefine/man/classic_flow.Rd |only ggrefine-0.5.0/ggrefine/man/classic_keep.Rd |only ggrefine-0.5.0/ggrefine/man/figures/README-example-1.png |binary ggrefine-0.5.0/ggrefine/man/figures/README-unnamed-chunk-2-1.png |binary ggrefine-0.5.0/ggrefine/man/figures/README-unnamed-chunk-3-1.png |binary ggrefine-0.5.0/ggrefine/man/figures/README-unnamed-chunk-4-1.png |binary ggrefine-0.5.0/ggrefine/man/figures/README-unnamed-chunk-5-1.png |binary ggrefine-0.5.0/ggrefine/man/figures/README-unnamed-chunk-6-1.png |binary ggrefine-0.5.0/ggrefine/man/minimal_drift.Rd |only ggrefine-0.5.0/ggrefine/man/minimal_drop.Rd |only ggrefine-0.5.0/ggrefine/man/minimal_flow.Rd |only ggrefine-0.5.0/ggrefine/man/minimal_keep.Rd |only ggrefine-0.5.0/ggrefine/man/modern_drift.Rd |only ggrefine-0.5.0/ggrefine/man/modern_drop.Rd |only ggrefine-0.5.0/ggrefine/man/modern_flow.Rd |only ggrefine-0.5.0/ggrefine/man/modern_keep.Rd |only ggrefine-0.5.0/ggrefine/man/theme_dark.Rd | 96 ++--- ggrefine-0.5.0/ggrefine/man/theme_ggplot2.Rd |only ggrefine-0.5.0/ggrefine/man/theme_grey.Rd | 103 ++--- ggrefine-0.5.0/ggrefine/man/theme_light.Rd | 75 ++-- ggrefine-0.5.0/ggrefine/man/void_drift.Rd |only ggrefine-0.5.0/ggrefine/man/void_drop.Rd |only ggrefine-0.5.0/ggrefine/man/void_flow.Rd |only ggrefine-0.5.0/ggrefine/man/void_keep.Rd |only ggrefine-0.5.0/ggrefine/tests/spelling.R | 10 51 files changed, 342 insertions(+), 222 deletions(-)