Title: Model Selection and Post-Hoc Analysis for (G)LMER Models
Description: The main function of the package is to perform backward selection of fixed effects, forward fitting of the random effects, and post-hoc analysis using parallel capabilities. Other functionality includes the computation of ANOVAs with upper- or lower-bound p-values and R-squared values for each model term, model criticism plots, data trimming on model residuals, and data visualization. The data to run examples is contained in package LCF_data.
Author: Antoine Tremblay [aut, cre],
Johannes Ransijn [ctb]
Maintainer: Antoine Tremblay <trea26@gmail.com>
Diff between LMERConvenienceFunctions versions 3.0 dated 2020-10-06 and 3.2 dated 2026-08-24
DESCRIPTION | 14 ++++++++------ MD5 | 6 +++--- NEWS | 6 +++--- man/relLik.Rd | 10 ++++------ 4 files changed, 18 insertions(+), 18 deletions(-)
More information about LMERConvenienceFunctions at CRAN
Permanent link
Title: Easily Build Command Line Applications
Description: Run simple 'R' scripts as command line applications, with
automatic robust and convenient support for command line arguments.
This package provides 'Rapp', an alternative 'R' front-end similar to
'Rscript', that enables this.
Author: Tomasz Kalinowski [aut, cre]
Maintainer: Tomasz Kalinowski <tomasz@posit.co>
Diff between Rapp versions 0.4.0 dated 2026-06-11 and 0.4.1 dated 2026-08-24
Rapp-0.4.0/Rapp/tests/testthat/_snaps/multi-options.md |only Rapp-0.4.0/Rapp/tests/testthat/_snaps/subcommands.md |only Rapp-0.4.1/Rapp/DESCRIPTION | 8 Rapp-0.4.1/Rapp/MD5 | 23 - Rapp-0.4.1/Rapp/NEWS.md | 5 Rapp-0.4.1/Rapp/tests/testthat/_snaps/help-snapshots.md | 326 ---------------- Rapp-0.4.1/Rapp/tests/testthat/_snaps/yaml12-0.1 |only Rapp-0.4.1/Rapp/tests/testthat/_snaps/yaml12-0.2 |only Rapp-0.4.1/Rapp/tests/testthat/helpers.R | 11 Rapp-0.4.1/Rapp/tests/testthat/test-help-snapshots.R | 24 - Rapp-0.4.1/Rapp/tests/testthat/test-multi-options.R | 11 Rapp-0.4.1/Rapp/tests/testthat/test-snapshot-variants.R |only Rapp-0.4.1/Rapp/tests/testthat/test-subcommands.R | 5 13 files changed, 66 insertions(+), 347 deletions(-)
Title: Linear, Logistic and Generalized Linear Models Regressions for
the EnvWAS/EWAS Approach
Description: Tool for Environment-Wide Association Studies (EnvWAS / EWAS)
which are repeated analysis. It includes three functions. One function for
linear regression, a second for logistic regression and a last one for
generalized linear models.
Author: Marwan El Homsi [aut, cre, cph] ,
Isabella Annesi-Maesano [ctb, ths, fnd]
Maintainer: Marwan El Homsi <marwan_eh@outlook.fr>
Diff between Elja versions 1.0.0 dated 2023-07-03 and 1.0.1 dated 2026-08-24
DESCRIPTION | 33 - MD5 | 21 - NEWS.md |only R/Elja.R | 27 - build/vignette.rds |binary inst/doc/Elja.R | 52 +- inst/doc/Elja.Rmd | 338 ++++++++-------- inst/doc/Elja.html | 1040 ++++++++++++++++++++++++++-------------------------- man/ELJAglm.Rd | 9 man/ELJAlinear.Rd | 9 man/ELJAlogistic.Rd | 9 vignettes/Elja.Rmd | 338 ++++++++-------- 12 files changed, 932 insertions(+), 944 deletions(-)
Title: Design-Indexed Location-Scale Meta-Analysis
Description: Fits constrained and unrestricted meta-analytic location-scale
models in which residual between-study heterogeneity is modeled as an
exponential function of a prespecified design-robustness score. The
package supports maximum-likelihood (ML) and restricted
maximum-likelihood (REML) estimation, location moderators, the
conventional random-effects model as a nested special case, exact
estimation at the nonnegative scale-gradient boundary, design-indexed
heterogeneity summaries, scale-attenuation measures, prediction of
fitted heterogeneity, leave-one-out influence diagnostics, and
parametric-bootstrap inference for the scale gradient. Because the
scale-gradient null lies on the boundary of the constrained parameter
space, standard chi-square likelihood-ratio references do not apply
(Self and Liang, 1987, <doi:10.1080/01621459.1987.10478472>). The
general location-scale parent model is described in Viechtbauer and
Lopez-Lopez (2022, <doi:10.1002/jrsm.1562>). A scale model rewe [...truncated...]
Author: Subir Hait [aut, cre, cph]
Maintainer: Subir Hait <haitsubi@msu.edu>
Diff between drmeta versions 0.1.0 dated 2026-04-08 and 0.2.2 dated 2026-08-24
drmeta-0.1.0/drmeta/R/dr_heterogeneity.R |only drmeta-0.1.0/drmeta/R/dr_loo.R |only drmeta-0.1.0/drmeta/R/dr_plot.R |only drmeta-0.1.0/drmeta/R/dr_pub_bias.R |only drmeta-0.1.0/drmeta/R/dr_score.R |only drmeta-0.1.0/drmeta/R/dr_weights.R |only drmeta-0.1.0/drmeta/R/drmeta_pkg.R |only drmeta-0.1.0/drmeta/build |only drmeta-0.1.0/drmeta/inst/doc |only drmeta-0.1.0/drmeta/man/coef.drmeta.Rd |only drmeta-0.1.0/drmeta/man/confint.drmeta.Rd |only drmeta-0.1.0/drmeta/man/dr_forest.Rd |only drmeta-0.1.0/drmeta/man/dr_funnel.Rd |only drmeta-0.1.0/drmeta/man/dr_plot.Rd |only drmeta-0.1.0/drmeta/man/dr_pub_bias.Rd |only drmeta-0.1.0/drmeta/man/dr_variance.Rd |only drmeta-0.1.0/drmeta/man/dr_weights.Rd |only drmeta-0.1.0/drmeta/man/drmeta-package.Rd |only drmeta-0.1.0/drmeta/man/fitted.drmeta.Rd |only drmeta-0.1.0/drmeta/man/logLik.drmeta.Rd |only drmeta-0.1.0/drmeta/man/print.drmeta.Rd |only drmeta-0.1.0/drmeta/man/residuals.drmeta.Rd |only drmeta-0.1.0/drmeta/man/summary.drmeta.Rd |only drmeta-0.1.0/drmeta/tests/testthat/test-drmeta.R |only drmeta-0.1.0/drmeta/vignettes |only drmeta-0.2.2/drmeta/DESCRIPTION | 67 - drmeta-0.2.2/drmeta/MD5 | 62 - drmeta-0.2.2/drmeta/NAMESPACE | 61 - drmeta-0.2.2/drmeta/NEWS.md |only drmeta-0.2.2/drmeta/R/bootstrap.R |only drmeta-0.2.2/drmeta/R/diagnostics.R |only drmeta-0.2.2/drmeta/R/drmeta.R | 703 ++++++---------- drmeta-0.2.2/drmeta/R/plot.R |only drmeta-0.2.2/drmeta/R/score.R |only drmeta-0.2.2/drmeta/README.md | 194 +--- drmeta-0.2.2/drmeta/inst/extdata |only drmeta-0.2.2/drmeta/man/dr_from_design.Rd | 109 +- drmeta-0.2.2/drmeta/man/dr_heterogeneity.Rd | 92 -- drmeta-0.2.2/drmeta/man/dr_loo.Rd | 81 - drmeta-0.2.2/drmeta/man/dr_plot_vfun.Rd | 90 +- drmeta-0.2.2/drmeta/man/dr_scale_attenuation.Rd |only drmeta-0.2.2/drmeta/man/dr_scale_predict.Rd |only drmeta-0.2.2/drmeta/man/dr_score.Rd | 108 -- drmeta-0.2.2/drmeta/man/drmeta-methods.Rd |only drmeta-0.2.2/drmeta/man/drmeta.Rd | 136 +-- drmeta-0.2.2/drmeta/man/drmeta_bootstrap_gamma.Rd |only drmeta-0.2.2/drmeta/man/normalize_01.Rd | 48 - drmeta-0.2.2/drmeta/man/print.drmeta_bootstrap_gamma.Rd |only drmeta-0.2.2/drmeta/tests/testthat.R |only drmeta-0.2.2/drmeta/tests/testthat/test-core.R |only 50 files changed, 717 insertions(+), 1034 deletions(-)
Title: Access Women's Basketball Play by Play Data
Description: A utility for working with women's basketball data. A
scraping and aggregating interface for the WNBA Stats API
<https://stats.wnba.com/> and ESPN's <https://www.espn.com> women's
college basketball and WNBA statistics. It provides users with the
capability to access the game play-by-plays, box scores, standings and
results to analyze the data for themselves.
Author: Saiem Gilani [aut, cre, cph] ,
Geoffery Hutchinson [aut]
Maintainer: Saiem Gilani <saiem.gilani@gmail.com>
Diff between wehoop versions 2.1.0 dated 2024-07-21 and 3.0.0 dated 2026-08-24
wehoop-2.1.0/wehoop/man/espn_wbb_game_rosters.Rd |only wehoop-2.1.0/wehoop/man/espn_wbb_pbp.Rd |only wehoop-2.1.0/wehoop/man/espn_wbb_player_box.Rd |only wehoop-2.1.0/wehoop/man/espn_wbb_team_box.Rd |only wehoop-2.1.0/wehoop/man/espn_wnba_game_rosters.Rd |only wehoop-2.1.0/wehoop/man/espn_wnba_pbp.Rd |only wehoop-2.1.0/wehoop/man/espn_wnba_player_box.Rd |only wehoop-2.1.0/wehoop/man/espn_wnba_team_box.Rd |only wehoop-2.1.0/wehoop/man/helper_espn_wbb_player_box.Rd |only wehoop-2.1.0/wehoop/man/helper_espn_wbb_team_box.Rd |only wehoop-2.1.0/wehoop/man/helper_espn_wnba_player_box.Rd |only wehoop-2.1.0/wehoop/man/helper_espn_wnba_team_box.Rd |only wehoop-2.1.0/wehoop/man/load_wbb_pbp.Rd |only wehoop-2.1.0/wehoop/man/load_wbb_player_box.Rd |only wehoop-2.1.0/wehoop/man/load_wbb_schedule.Rd |only wehoop-2.1.0/wehoop/man/load_wbb_team_box.Rd |only wehoop-2.1.0/wehoop/man/load_wnba_pbp.Rd |only wehoop-2.1.0/wehoop/man/load_wnba_player_box.Rd |only wehoop-2.1.0/wehoop/man/load_wnba_schedule.Rd |only wehoop-2.1.0/wehoop/man/load_wnba_team_box.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscoreadvancedv2.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscoreadvancedv3.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscorefourfactorsv2.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscorefourfactorsv3.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscoremiscv2.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscoremiscv3.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscoreplayertrackv3.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscorescoringv2.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscorescoringv3.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscoresummaryv2.Rd |only wehoop-2.1.0/wehoop/man/wnba_boxscoreusagev2.Rd |only wehoop-2.1.0/wehoop/man/wnba_draftcombinedrillresults.Rd |only wehoop-2.1.0/wehoop/man/wnba_draftcombinenonstationaryshooting.Rd |only wehoop-2.1.0/wehoop/man/wnba_draftcombineplayeranthro.Rd |only wehoop-2.1.0/wehoop/man/wnba_draftcombinespotshooting.Rd |only wehoop-2.1.0/wehoop/man/wnba_hustlestatsboxscore.Rd |only wehoop-2.1.0/wehoop/man/wnba_leaguehustlestatsplayerleaders.Rd |only wehoop-2.1.0/wehoop/man/wnba_leaguehustlestatsteam.Rd |only wehoop-2.1.0/wehoop/man/wnba_leaguehustlestatsteamleaders.Rd |only wehoop-2.1.0/wehoop/man/wnba_playerdashboardbygamesplits.Rd |only wehoop-2.1.0/wehoop/man/wnba_playerdashboardbygeneralsplits.Rd |only wehoop-2.1.0/wehoop/man/wnba_playerdashboardbylastngames.Rd |only wehoop-2.1.0/wehoop/man/wnba_playerdashboardbyopponent.Rd |only wehoop-2.1.0/wehoop/man/wnba_playerdashboardbyshootingsplits.Rd |only wehoop-2.1.0/wehoop/man/wnba_playerdashboardbyteamperformance.Rd |only wehoop-2.1.0/wehoop/man/wnba_playerdashboardbyyearoveryear.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamdashboardbygamesplits.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamdashboardbygeneralsplits.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamdashboardbylastngames.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamdashboardbyopponent.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamdashboardbyshootingsplits.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamdashboardbyteamperformance.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamdashboardbyyearoveryear.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamplayeronoffdetails.Rd |only wehoop-2.1.0/wehoop/man/wnba_teamplayeronoffsummary.Rd |only wehoop-2.1.0/wehoop/man/wnba_videodetails.Rd |only wehoop-3.0.0/wehoop/DESCRIPTION | 49 wehoop-3.0.0/wehoop/LICENSE | 2 wehoop-3.0.0/wehoop/MD5 | 1187 +- wehoop-3.0.0/wehoop/NAMESPACE | 759 + wehoop-3.0.0/wehoop/NEWS.md | 1215 ++ wehoop-3.0.0/wehoop/R/bart_wbb.R |only wehoop-3.0.0/wehoop/R/bref_wnba.R |only wehoop-3.0.0/wehoop/R/bref_wnba_utils.R |only wehoop-3.0.0/wehoop/R/crosswalk_basketball.R |only wehoop-3.0.0/wehoop/R/data.R |only wehoop-3.0.0/wehoop/R/espn_basketball.R |only wehoop-3.0.0/wehoop/R/espn_basketball_athlete_career_helpers.R |only wehoop-3.0.0/wehoop/R/espn_basketball_athlete_helpers.R |only wehoop-3.0.0/wehoop/R/espn_basketball_awards_helpers.R |only wehoop-3.0.0/wehoop/R/espn_basketball_calendar_helpers.R |only 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wehoop-3.0.0/wehoop/R/espn_basketball_season_meta_helpers.R |only wehoop-3.0.0/wehoop/R/espn_basketball_team_deep_helpers.R |only wehoop-3.0.0/wehoop/R/espn_basketball_team_helpers.R |only wehoop-3.0.0/wehoop/R/espn_basketball_tournaments_helpers.R |only wehoop-3.0.0/wehoop/R/espn_basketball_week_helpers.R |only wehoop-3.0.0/wehoop/R/espn_wbb_athlete_career.R |only wehoop-3.0.0/wehoop/R/espn_wbb_athletes.R |only wehoop-3.0.0/wehoop/R/espn_wbb_awards.R |only wehoop-3.0.0/wehoop/R/espn_wbb_calendar.R |only wehoop-3.0.0/wehoop/R/espn_wbb_coach.R |only wehoop-3.0.0/wehoop/R/espn_wbb_data.R | 4262 +++++----- wehoop-3.0.0/wehoop/R/espn_wbb_event_detail.R |only wehoop-3.0.0/wehoop/R/espn_wbb_franchise.R |only wehoop-3.0.0/wehoop/R/espn_wbb_groups_v2.R |only wehoop-3.0.0/wehoop/R/espn_wbb_injuries.R |only wehoop-3.0.0/wehoop/R/espn_wbb_league.R |only wehoop-3.0.0/wehoop/R/espn_wbb_news.R |only wehoop-3.0.0/wehoop/R/espn_wbb_positions.R |only wehoop-3.0.0/wehoop/R/espn_wbb_powerindex.R |only 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wehoop-3.0.0/wehoop/R/wnba_crosswalk.R |only wehoop-3.0.0/wehoop/R/wnba_data_pbp.R | 82 wehoop-3.0.0/wehoop/R/wnba_possessions.R |only wehoop-3.0.0/wehoop/R/wnba_rapm.R |only wehoop-3.0.0/wehoop/R/wnba_shot_zones.R |only wehoop-3.0.0/wehoop/R/wnba_stats.R |only wehoop-3.0.0/wehoop/R/wnba_stats_boxscore.R | 1327 +-- wehoop-3.0.0/wehoop/R/wnba_stats_boxscore_v3.R | 2185 ++--- wehoop-3.0.0/wehoop/R/wnba_stats_cume.R | 426 wehoop-3.0.0/wehoop/R/wnba_stats_draft.R | 524 - wehoop-3.0.0/wehoop/R/wnba_stats_franchise.R | 314 wehoop-3.0.0/wehoop/R/wnba_stats_hustle.R | 568 - wehoop-3.0.0/wehoop/R/wnba_stats_leaders.R | 1518 +-- wehoop-3.0.0/wehoop/R/wnba_stats_league.R | 382 wehoop-3.0.0/wehoop/R/wnba_stats_league_dash.R | 681 - wehoop-3.0.0/wehoop/R/wnba_stats_lineups.R | 429 - wehoop-3.0.0/wehoop/R/wnba_stats_pbp.R | 1805 ++-- wehoop-3.0.0/wehoop/R/wnba_stats_player.R | 2295 +---- wehoop-3.0.0/wehoop/R/wnba_stats_player_dash.R | 3174 ------- wehoop-3.0.0/wehoop/R/wnba_stats_roster.R | 278 wehoop-3.0.0/wehoop/R/wnba_stats_scoreboard.R | 850 - wehoop-3.0.0/wehoop/R/wnba_stats_shotchart.R | 193 wehoop-3.0.0/wehoop/R/wnba_stats_team.R | 1940 +--- wehoop-3.0.0/wehoop/R/wnba_stats_team_dash.R | 3169 +------ wehoop-3.0.0/wehoop/R/wnba_stats_video.R | 363 wehoop-3.0.0/wehoop/README.md | 299 wehoop-3.0.0/wehoop/data |only wehoop-3.0.0/wehoop/inst |only wehoop-3.0.0/wehoop/man/bart_wbb_game_schedule.Rd |only wehoop-3.0.0/wehoop/man/bart_wbb_ratings.Rd |only wehoop-3.0.0/wehoop/man/basketball_load_wbb_game_rosters_schema.Rd |only wehoop-3.0.0/wehoop/man/basketball_load_wbb_officials_schema.Rd |only wehoop-3.0.0/wehoop/man/basketball_load_wbb_shots_schema.Rd |only wehoop-3.0.0/wehoop/man/basketball_load_wbb_standings_schema.Rd |only wehoop-3.0.0/wehoop/man/basketball_load_wbb_team_stats_schema.Rd |only wehoop-3.0.0/wehoop/man/bref_wnba_player_stats.Rd |only wehoop-3.0.0/wehoop/man/bref_wnba_standings.Rd |only wehoop-3.0.0/wehoop/man/bref_wnba_team_stats.Rd |only 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wehoop-3.0.0/wehoop/man/espn_wbb_season_type.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_season_types.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_season_week.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_season_weeks.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_seasons.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_standings.Rd | 234 wehoop-3.0.0/wehoop/man/espn_wbb_team.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_team_injuries.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_team_news.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_team_record_detail.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_team_schedule.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_team_season_roster.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_team_season_statistics.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_team_stats.Rd | 273 wehoop-3.0.0/wehoop/man/espn_wbb_teams.Rd | 125 wehoop-3.0.0/wehoop/man/espn_wbb_tournament.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_tournament_season.Rd |only wehoop-3.0.0/wehoop/man/espn_wbb_tournament_seasons.Rd |only 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wehoop-3.0.0/wehoop/man/espn_wnba_player_info.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_player_seasons.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_player_stats.Rd | 372 wehoop-3.0.0/wehoop/man/espn_wnba_position.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_positions.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_powerindex.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_scoreboard.Rd | 115 wehoop-3.0.0/wehoop/man/espn_wnba_season_awards.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_group.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_groups.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_info.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_leaders.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_ranking.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_rankings.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_type.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_types.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_week.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_season_weeks.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_seasons.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_standings.Rd | 124 wehoop-3.0.0/wehoop/man/espn_wnba_team.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_injuries.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_news.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_record.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_record_detail.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_schedule.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_season_roster.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_season_statistics.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_team_stats.Rd | 314 wehoop-3.0.0/wehoop/man/espn_wnba_teams.Rd | 104 wehoop-3.0.0/wehoop/man/espn_wnba_transactions.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_venues.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_week_ranking.Rd |only wehoop-3.0.0/wehoop/man/espn_wnba_week_rankings.Rd |only wehoop-3.0.0/wehoop/man/fox_basketball_boxscore.Rd |only wehoop-3.0.0/wehoop/man/fox_basketball_league_leaders.Rd |only wehoop-3.0.0/wehoop/man/fox_basketball_standings.Rd |only wehoop-3.0.0/wehoop/man/fox_wbb_teams_all.Rd |only wehoop-3.0.0/wehoop/man/has_hhs_login.Rd |only wehoop-3.0.0/wehoop/man/helper_espn_wbb_pbp.Rd | 14 wehoop-3.0.0/wehoop/man/helper_espn_wnba_pbp.Rd | 14 wehoop-3.0.0/wehoop/man/hhs_team_roster.Rd |only wehoop-3.0.0/wehoop/man/hhs_team_stats.Rd |only wehoop-3.0.0/wehoop/man/hhs_teams.Rd |only wehoop-3.0.0/wehoop/man/load_ncaa_wbb_lineups.Rd |only wehoop-3.0.0/wehoop/man/load_wbb_game_rosters.Rd |only wehoop-3.0.0/wehoop/man/load_wbb_player_crosswalk.Rd |only wehoop-3.0.0/wehoop/man/load_wbb_player_value.Rd |only wehoop-3.0.0/wehoop/man/load_wnba_draft.Rd |only wehoop-3.0.0/wehoop/man/load_wnba_stats_coaches.Rd |only wehoop-3.0.0/wehoop/man/load_wnba_stats_leaguedash.Rd |only wehoop-3.0.0/wehoop/man/most_recent_wbb_season.Rd | 15 wehoop-3.0.0/wehoop/man/most_recent_wnba_season.Rd | 13 wehoop-3.0.0/wehoop/man/most_recent_wnba_stats_season.Rd |only wehoop-3.0.0/wehoop/man/ncaa_wbb.Rd |only wehoop-3.0.0/wehoop/man/ncaa_wbb_NET_rankings.Rd | 27 wehoop-3.0.0/wehoop/man/ncaa_wbb_teams.Rd | 67 wehoop-3.0.0/wehoop/man/parameter_descriptions.Rd |only wehoop-3.0.0/wehoop/man/parquet_from_url.Rd |only wehoop-3.0.0/wehoop/man/request_with_proxy.Rd | 16 wehoop-3.0.0/wehoop/man/update_wbb_db.Rd | 17 wehoop-3.0.0/wehoop/man/update_wnba_db.Rd | 17 wehoop-3.0.0/wehoop/man/update_wnba_stats_db.Rd |only wehoop-3.0.0/wehoop/man/wbb_player_crosswalk.Rd |only wehoop-3.0.0/wehoop/man/wbb_schedule_crosswalk.Rd |only wehoop-3.0.0/wehoop/man/wbb_team_crosswalk.Rd |only wehoop-3.0.0/wehoop/man/wehoop-package.Rd | 12 wehoop-3.0.0/wehoop/man/wehoop_loaders.Rd |only wehoop-3.0.0/wehoop/man/wnba_alltimeleadersgrids.Rd | 276 wehoop-3.0.0/wehoop/man/wnba_assistleaders.Rd | 37 wehoop-3.0.0/wehoop/man/wnba_assisttracker.Rd | 16 wehoop-3.0.0/wehoop/man/wnba_boxscorehustlev2.Rd | 218 wehoop-3.0.0/wehoop/man/wnba_boxscoreplayertrackv2.Rd | 334 wehoop-3.0.0/wehoop/man/wnba_boxscoresummaryv2_game_summary_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_boxscoresummaryv2_last_meeting_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_boxscoresummaryv2_season_series_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_boxscoresummaryv3.Rd |only wehoop-3.0.0/wehoop/man/wnba_boxscoretraditionalv2.Rd | 595 + wehoop-3.0.0/wehoop/man/wnba_boxscoretraditionalv3.Rd | 994 +- wehoop-3.0.0/wehoop/man/wnba_commonallplayers.Rd | 49 wehoop-3.0.0/wehoop/man/wnba_commonplayerinfo.Rd | 106 wehoop-3.0.0/wehoop/man/wnba_commonplayoffseries.Rd | 14 wehoop-3.0.0/wehoop/man/wnba_commonteamroster.Rd | 75 wehoop-3.0.0/wehoop/man/wnba_cumestatsplayer.Rd | 177 wehoop-3.0.0/wehoop/man/wnba_cumestatsplayergames.Rd | 16 wehoop-3.0.0/wehoop/man/wnba_cumestatsteam.Rd | 195 wehoop-3.0.0/wehoop/man/wnba_cumestatsteamgames.Rd | 16 wehoop-3.0.0/wehoop/man/wnba_data_pbp.Rd | 57 wehoop-3.0.0/wehoop/man/wnba_draftboard.Rd | 103 wehoop-3.0.0/wehoop/man/wnba_draftcombinestats.Rd | 177 wehoop-3.0.0/wehoop/man/wnba_drafthistory.Rd | 47 wehoop-3.0.0/wehoop/man/wnba_fantasywidget.Rd | 57 wehoop-3.0.0/wehoop/man/wnba_franchisehistory.Rd | 67 wehoop-3.0.0/wehoop/man/wnba_franchiseleaders.Rd | 49 wehoop-3.0.0/wehoop/man/wnba_franchiseleaderswrank.Rd | 111 wehoop-3.0.0/wehoop/man/wnba_franchiseplayers.Rd | 69 wehoop-3.0.0/wehoop/man/wnba_gamerotation.Rd | 78 wehoop-3.0.0/wehoop/man/wnba_homepageleaders.Rd | 65 wehoop-3.0.0/wehoop/man/wnba_homepagev2.Rd | 108 wehoop-3.0.0/wehoop/man/wnba_homepagev2_home_page_stat1_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_homepagewidget.Rd | 979 +- wehoop-3.0.0/wehoop/man/wnba_infographicfanduelplayer.Rd | 138 wehoop-3.0.0/wehoop/man/wnba_leaderstiles.Rd | 45 wehoop-3.0.0/wehoop/man/wnba_leaguedashlineups.Rd | 166 wehoop-3.0.0/wehoop/man/wnba_leaguedashplayerbiostats.Rd | 140 wehoop-3.0.0/wehoop/man/wnba_leaguedashplayerclutch.Rd | 228 wehoop-3.0.0/wehoop/man/wnba_leaguedashplayershotlocations.Rd | 168 wehoop-3.0.0/wehoop/man/wnba_leaguedashplayerstats.Rd | 226 wehoop-3.0.0/wehoop/man/wnba_leaguedashteamclutch.Rd | 96 wehoop-3.0.0/wehoop/man/wnba_leaguedashteamclutch_league_dash_team_clutch_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_leaguedashteamshotlocations.Rd | 105 wehoop-3.0.0/wehoop/man/wnba_leaguedashteamstats.Rd | 126 wehoop-3.0.0/wehoop/man/wnba_leaguegamefinder.Rd | 101 wehoop-3.0.0/wehoop/man/wnba_leaguegamelog.Rd | 102 wehoop-3.0.0/wehoop/man/wnba_leaguehustlestatsplayer.Rd | 351 wehoop-3.0.0/wehoop/man/wnba_leagueleaders.Rd | 75 wehoop-3.0.0/wehoop/man/wnba_leaguelineupviz.Rd | 100 wehoop-3.0.0/wehoop/man/wnba_leagueplayerondetails.Rd | 150 wehoop-3.0.0/wehoop/man/wnba_leagueseasonmatchups.Rd | 148 wehoop-3.0.0/wehoop/man/wnba_leaguestandingsv3.Rd | 215 wehoop-3.0.0/wehoop/man/wnba_live_boxscore.Rd | 539 - wehoop-3.0.0/wehoop/man/wnba_live_pbp.Rd | 134 wehoop-3.0.0/wehoop/man/wnba_on_off_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_pbp.Rd | 105 wehoop-3.0.0/wehoop/man/wnba_pbps.Rd | 71 wehoop-3.0.0/wehoop/man/wnba_playbyplayv3.Rd |only wehoop-3.0.0/wehoop/man/wnba_player_crosswalk.Rd |only wehoop-3.0.0/wehoop/man/wnba_player_dashboard_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_playerawards.Rd | 92 wehoop-3.0.0/wehoop/man/wnba_playercareerbycollege.Rd | 110 wehoop-3.0.0/wehoop/man/wnba_playercareerbycollegerollup.Rd | 201 wehoop-3.0.0/wehoop/man/wnba_playercareerstats.Rd | 332 wehoop-3.0.0/wehoop/man/wnba_playercareerstats_season_rankings_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_playercareerstats_season_totals_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_playercompare.Rd | 141 wehoop-3.0.0/wehoop/man/wnba_playerdashboardbyclutch.Rd | 1433 +-- wehoop-3.0.0/wehoop/man/wnba_playerestimatedmetrics.Rd | 128 wehoop-3.0.0/wehoop/man/wnba_playerfantasyprofile.Rd | 372 wehoop-3.0.0/wehoop/man/wnba_playerfantasyprofilebargraph.Rd | 124 wehoop-3.0.0/wehoop/man/wnba_playergamelog.Rd | 118 wehoop-3.0.0/wehoop/man/wnba_playergamelogs.Rd | 200 wehoop-3.0.0/wehoop/man/wnba_playergamestreakfinder.Rd | 88 wehoop-3.0.0/wehoop/man/wnba_playerheadshot.Rd | 55 wehoop-3.0.0/wehoop/man/wnba_playerindex.Rd | 116 wehoop-3.0.0/wehoop/man/wnba_playernextngames.Rd | 90 wehoop-3.0.0/wehoop/man/wnba_playerprofilev2.Rd | 464 - wehoop-3.0.0/wehoop/man/wnba_players_on_court_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_playervsplayer.Rd | 378 wehoop-3.0.0/wehoop/man/wnba_possession_lineups.Rd |only wehoop-3.0.0/wehoop/man/wnba_rapm.Rd |only wehoop-3.0.0/wehoop/man/wnba_schedule.Rd | 111 wehoop-3.0.0/wehoop/man/wnba_schedule_crosswalk.Rd |only wehoop-3.0.0/wehoop/man/wnba_scoreboard.Rd | 167 wehoop-3.0.0/wehoop/man/wnba_scoreboard_east_conf_standings_by_day_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_scoreboardv2.Rd | 248 wehoop-3.0.0/wehoop/man/wnba_scoreboardv3.Rd | 177 wehoop-3.0.0/wehoop/man/wnba_shooting_splits_assisted_by_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_shooting_splits_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_shot_zones.Rd |only wehoop-3.0.0/wehoop/man/wnba_shotchartdetail.Rd | 79 wehoop-3.0.0/wehoop/man/wnba_shotchartdetail_league_averages_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_shotchartleaguewide.Rd | 57 wehoop-3.0.0/wehoop/man/wnba_shotchartlineupdetail.Rd | 104 wehoop-3.0.0/wehoop/man/wnba_stats.Rd |only wehoop-3.0.0/wehoop/man/wnba_team_crosswalk.Rd |only wehoop-3.0.0/wehoop/man/wnba_team_dashboard_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_team_summary_overall_schema.Rd |only wehoop-3.0.0/wehoop/man/wnba_teamdashboardbyclutch.Rd | 1511 ++- wehoop-3.0.0/wehoop/man/wnba_teamdashlineups.Rd | 225 wehoop-3.0.0/wehoop/man/wnba_teamdetails.Rd | 139 wehoop-3.0.0/wehoop/man/wnba_teamestimatedmetrics.Rd | 105 wehoop-3.0.0/wehoop/man/wnba_teamgamelog.Rd | 99 wehoop-3.0.0/wehoop/man/wnba_teamgamelogs.Rd | 157 wehoop-3.0.0/wehoop/man/wnba_teamgamestreakfinder.Rd | 71 wehoop-3.0.0/wehoop/man/wnba_teamhistoricalleaders.Rd | 79 wehoop-3.0.0/wehoop/man/wnba_teaminfocommon.Rd | 100 wehoop-3.0.0/wehoop/man/wnba_teamplayerdashboard.Rd | 411 wehoop-3.0.0/wehoop/man/wnba_teams.Rd | 87 wehoop-3.0.0/wehoop/man/wnba_teamvsplayer.Rd | 486 - wehoop-3.0.0/wehoop/man/wnba_teamyearbyyearstats.Rd | 113 wehoop-3.0.0/wehoop/man/wnba_todays_scoreboard.Rd | 125 wehoop-3.0.0/wehoop/man/wnba_videodetailsasset.Rd | 170 wehoop-3.0.0/wehoop/man/wnba_videoevents.Rd | 9 wehoop-3.0.0/wehoop/man/wnba_videostatus.Rd | 44 wehoop-3.0.0/wehoop/man/year_to_season.Rd |only wehoop-3.0.0/wehoop/tests/testthat/README.md |only wehoop-3.0.0/wehoop/tests/testthat/fixtures |only wehoop-3.0.0/wehoop/tests/testthat/helper-skip.R |only wehoop-3.0.0/wehoop/tests/testthat/test-bart_wbb.R |only wehoop-3.0.0/wehoop/tests/testthat/test-bref_wnba.R |only wehoop-3.0.0/wehoop/tests/testthat/test-crosswalk_basketball.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_basketball_player_core.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_athletes_index.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_award.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_calendar.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_coach.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_coach_record.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_coach_season.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_coaches.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_conferences.R | 3 wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_franchise.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_franchises.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_all.R | 13 wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_broadcasts.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_odds.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_official_detail.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_officials.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_pbp.R | 3 wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_play.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_play_personnel.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_player_box.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_powerindex.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_predictor.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_probabilities.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_propbets.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_rosters.R | 2 wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_situation.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_team_leaders.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_team_linescores.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_team_records.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_team_roster.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_team_roster_entry.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_team_score.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_game_team_statistics.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_injuries.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_leaders.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_news.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_pbp_participants.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_awards.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_box.R | 2 wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_career_stats.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_eventlog.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_eventlog_v2.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_gamelog.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_info.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_overview.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_seasons.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_splits.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_statisticslog.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_stats.R | 2 wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_player_stats_v3.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_position.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_positions.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_powerindex.R |only wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_rankings.R | 1 wehoop-3.0.0/wehoop/tests/testthat/test-espn_wbb_scoreboard.R | 1 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wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguegamefinder.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguegamelog.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguehustlestatsplayer.R | 11 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguehustlestatsplayerleaders.R | 19 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguehustlestatsteam.R | 11 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguehustlestatsteamleaders.R | 21 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leagueleaders.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguelineupviz.R | 10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leagueplayerondetails.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_leaguestandingsv3.R | 6 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_live_boxscore.R | 24 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_live_pbp.R | 3 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_pbp.R | 3 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playbyplayv3.R |only 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10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playerestimatedmetrics.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playerfantasyprofile.R | 16 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playerfantasyprofilebargraph.R | 10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playergamelog.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playergamelogs.R | 6 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playergamestreakfinder.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playerindex.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playernextngames.R | 3 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playerprofilev2.R | 44 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_playervsplayer.R | 28 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_possessions.R |only wehoop-3.0.0/wehoop/tests/testthat/test-wnba_schedule.R | 3 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_scoreboard.R | 20 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_scoreboardv2.R | 26 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_scoreboardv3.R | 3 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_shot_zones.R |only wehoop-3.0.0/wehoop/tests/testthat/test-wnba_shotchartdetail.R | 10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_shotchartleaguewide.R | 10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_shotchartlineupdetail.R | 17 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_stats_pbp_oncourt.R |only wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbyclutch.R | 30 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbygamesplits.R | 18 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbygeneralsplits.R | 20 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbylastngames.R | 20 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbyopponent.R | 16 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbyshootingsplits.R | 22 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbyteamperformance.R | 16 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashboardbyyearoveryear.R | 12 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdashlineups.R | 12 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamdetails.R | 22 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamestimatedmetrics.R | 10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamgamelog.R | 10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamgamelogs.R | 8 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamgamestreakfinder.R | 12 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamhistoricalleaders.R | 12 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teaminfocommon.R | 14 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamplayerdashboard.R | 12 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamplayeronoffdetails.R | 14 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamplayeronoffsummary.R | 14 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teams.R | 20 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamvsplayer.R | 41 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_teamyearbyyearstats.R | 10 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_todays_scoreboard.R | 70 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_videodetails.R | 7 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_videodetailsasset.R | 7 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_videoevents.R | 105 wehoop-3.0.0/wehoop/tests/testthat/test-wnba_videostatus.R | 6 881 files changed, 28974 insertions(+), 29149 deletions(-)
Title: A Traceability Focused Grammar of Clinical Data Summary
Description: A traceability focused tool created to simplify the data manipulation necessary to create clinical summaries.
Author: Eli Miller [aut] ,
Mike Stackhouse [aut, cre] ,
Ashley Tarasiewicz [aut],
Nathan Kosiba [ctb] ,
Sadchla Mascary [ctb],
Andrew Bates [ctb],
Shiyu Chen [ctb],
Oleksii Mikryukov [ctb],
Atorus Research LLC [cph]
Maintainer: Mike Stackhouse <mike.stackhouse@atorusresearch.com>
Diff between Tplyr versions 1.4.0 dated 2026-08-23 and 1.4.1 dated 2026-08-24
DESCRIPTION | 6 ++-- MD5 | 12 ++++----- NEWS.md | 5 ++++ R/desc.R | 12 +++++++-- inst/doc/Tplyr.html | 12 ++++----- inst/doc/desc_layer_formatting.html | 10 ++++---- tests/testthat/test-desc.R | 45 ++++++++++++++++++++++++++++++++++++ 7 files changed, 79 insertions(+), 23 deletions(-)
Title: Semi-Supervised Ensemble Learning
Description: Weighted-ensemble regression over base learners supported by
'caret' (Kuhn (2008) <doi:10.18637/jss.v028.i05>), with cross-validated
hyperparameter selection, out-of-fold diagnostics, and signed residual-
offset estimates. Multi-response problems use iterative input-space
expansion related to Spyromitros-Xioufis et al. (2016)
<doi:10.1007/s10994-016-5546-z>, with Jacobi or 'Gauss-Seidel' sweeps,
package-defined companion gates and per-response iteration stitching.
A package-defined pseudo-label stage promotes prediction rows by a
cross-model and cross-dataset range ratio and accepts rounds with an
out-of-fold squared-correlation gauge.
Author: Alejandro Verri Kozlowski [aut, cre, cph]
Maintainer: Alejandro Verri Kozlowski <averri@fi.uba.ar>
Diff between ssel versions 0.3.1 dated 2026-07-28 and 0.4.0 dated 2026-08-24
DESCRIPTION | 9 - MD5 | 47 ++--- NAMESPACE | 76 ++++---- NEWS.md | 55 ++++++ R/chain.R | 42 +++- R/ssel-package.R | 146 +++++++++++----- R/trainRegressionModel.R | 54 +++--- README.md | 2 inst/REFERENCES.bib | 4 inst/WORDLIST | 258 +++++++++-------------------- inst/doc/chain-regression.Rmd | 1 inst/doc/chain-regression.html | 11 - inst/doc/ensemble-theory.Rmd | 49 ++++- inst/doc/ensemble-theory.html | 104 +++++++++-- inst/doc/semi-supervised.Rmd | 1 inst/doc/semi-supervised.html | 16 - man/removeOutliersIQR.Rd | 34 +++ man/trainModel.Rd | 39 +++- man/trainRegressionModel.Rd | 84 ++++++--- tests/testthat/test-chain.R | 17 + tests/testthat/test-removeOutliersIQR.R |only tests/testthat/test-trainRegressionModel.R | 50 +++++ vignettes/chain-regression.Rmd | 1 vignettes/ensemble-theory.Rmd | 49 ++++- vignettes/semi-supervised.Rmd | 1 25 files changed, 749 insertions(+), 401 deletions(-)
Title: Topological Data Analysis: Simplicial Complex
Description: Provides an implementation of simplicial complexes for
Topological Data Analysis (TDA). The package includes functions to
compute faces, boundary operators, Betti numbers, Euler characteristic,
and to construct simplicial complexes, including Vietoris-Rips, Cech,
Alpha, Delaunay, Witness, flood, and (via a Freudenthal triangulation)
cubical complexes for grid and image data. It also implements persistent
homology, from building filtrations (via a single build_filtration()
entry point covering all of the above) to computing persistence
diagrams, persistence landscapes, and Wasserstein/bottleneck distances
between diagrams, with the aim of helping readers understand the core
concepts of computational topology.
Methods are based on standard references in persistent homology such as
Zomorodian and Carlsson (2005) <doi:10.1007/s00454-004-1146-y>,
Chazal and Michel (2021) <doi:10.3389/frai.2021.667963>, and
Otter, Porter, Tillmann, Grindrod and Harrington (2017)
<doi:10.1140/e [...truncated...]
Author: ChiChien Wang [aut, cre, trl]
Maintainer: ChiChien Wang <kennywang2003@gmail.com>
Diff between SimplicialComplex versions 0.1.1 dated 2026-07-16 and 0.1.2 dated 2026-08-24
SimplicialComplex-0.1.1/SimplicialComplex/R/AbstractSimplicialComplex.R |only SimplicialComplex-0.1.1/SimplicialComplex/R/utils.R |only SimplicialComplex-0.1.1/SimplicialComplex/man/abstract_simplicial_complex.Rd |only SimplicialComplex-0.1.1/SimplicialComplex/man/build_vr_filtration.Rd |only SimplicialComplex-0.1.1/SimplicialComplex/man/figures |only SimplicialComplex-0.1.1/SimplicialComplex/tests/testthat.R |only SimplicialComplex-0.1.2/SimplicialComplex/DESCRIPTION | 34 SimplicialComplex-0.1.2/SimplicialComplex/MD5 | 73 + SimplicialComplex-0.1.2/SimplicialComplex/NAMESPACE | 23 SimplicialComplex-0.1.2/SimplicialComplex/R/AlphaComplex.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/Betti.R | 1 SimplicialComplex-0.1.2/SimplicialComplex/R/CechComplex.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/CompareComplexes.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/ComplexDistance.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/ComplexUtils.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/CubicalComplex.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/Distance.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/Filtration.R | 99 +- SimplicialComplex-0.1.2/SimplicialComplex/R/FloodComplex.R | 24 SimplicialComplex-0.1.2/SimplicialComplex/R/Persistence.R | 146 +++ SimplicialComplex-0.1.2/SimplicialComplex/R/PersistenceLandscape.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/PlotMatching.R |only SimplicialComplex-0.1.2/SimplicialComplex/R/PlotPD.R | 42 - SimplicialComplex-0.1.2/SimplicialComplex/R/VRComplex.R | 4 SimplicialComplex-0.1.2/SimplicialComplex/R/WitnessComplex.R |only SimplicialComplex-0.1.2/SimplicialComplex/README.md | 14 SimplicialComplex-0.1.2/SimplicialComplex/inst/example/TestingBasic.R | 33 SimplicialComplex-0.1.2/SimplicialComplex/inst/example/TestingCompareDistance.R |only SimplicialComplex-0.1.2/SimplicialComplex/inst/example/TestingComplexes.R |only SimplicialComplex-0.1.2/SimplicialComplex/man/AlphaComplex.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/CechComplex.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/DelaunayComplex.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/WitnessComplex.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/augmented_cost_matrix.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/bottleneck_distance.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/boundary_info.Rd | 25 SimplicialComplex-0.1.2/SimplicialComplex/man/build_clique_complex.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/build_cubical_filtration.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/build_filtration.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/build_flood_filtration.Rd | 2 SimplicialComplex-0.1.2/SimplicialComplex/man/circumsphere.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/compare_complexes.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/complex_distance.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/diagram_matching.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/extract_persistence_pairs.Rd | 38 SimplicialComplex-0.1.2/SimplicialComplex/man/flood_persistence.Rd | 12 SimplicialComplex-0.1.2/SimplicialComplex/man/min_enclosing_ball.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/pairwise_dist.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/persistence_landscape.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/persistence_pairs.Rd | 21 SimplicialComplex-0.1.2/SimplicialComplex/man/plot_landscape.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/plot_matching.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/plot_persistence.Rd | 2 SimplicialComplex-0.1.2/SimplicialComplex/man/restrict_filtration.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/simplices_to_filtration.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/man/wasserstein_distance.Rd |only SimplicialComplex-0.1.2/SimplicialComplex/tests/testthat/test-SimplicialComplex.R | 401 ++++++++++ 57 files changed, 885 insertions(+), 109 deletions(-)
More information about SimplicialComplex at CRAN
Permanent link
Title: Group Testing Procedures for Signal Detection and
Goodness-of-Fit
Description: It provides cumulative distribution function (CDF),
quantile, p-value, statistical power calculator and random number generator
for a collection of group-testing procedures, including the Higher Criticism
tests, the one-sided Kolmogorov-Smirnov tests, the one-sided Berk-Jones tests,
the one-sided phi-divergence tests, etc. The input are a group of p-values.
The null hypothesis is that they are i.i.d. Uniform(0,1). In the context of
signal detection, the null hypothesis means no signals. In the context of the
goodness-of-fit testing, which contrasts a group of i.i.d. random variables to
a given continuous distribution, the input p-values can be obtained by the CDF
transformation. The null hypothesis means that these random variables follow the
given distribution. For reference, see [1]Hong Zhang, Jiashun Jin and Zheyang Wu.
"Distributions and power of optimal signal-detection statistics in finite case",
IEEE Transactions on Signal Processing (2020) 68, 1021-1033; [2] Hong Zhang and Zhey [...truncated...]
Author: Hong Zhang [aut],
Zheyang Wu [aut, cre]
Maintainer: Zheyang Wu <zheyangwu@wpi.edu>
Diff between SetTest versions 0.3.0 dated 2024-07-14 and 0.3.1 dated 2026-08-24
DESCRIPTION | 20 +++++++++++++------- MD5 | 3 ++- NEWS.md |only 3 files changed, 15 insertions(+), 8 deletions(-)
Title: Build Powerful Pivot Tables and Dynamically Slice & Dice your
Data
Description: Build powerful pivot tables (aka Pivot Grid, Pivot Chart, Cross-Tab)
and dynamically slice & dice / drag 'n' drop your data. 'rpivotTable' is a
wrapper of 'pivottable', a powerful open-source Pivot Table library implemented
in 'JavaScript' by Nicolas Kruchten. Aligned to 'pivottable' v2.19.0.
Author: Enzo Martoglio [aut],
Nicolas Kruchten [ctb, cph],
Nagarajan Chinnasamy [ctb, cph],
Kenton Russell [ctb],
Lily Clements [cre]
Maintainer: Lily Clements <lily@idems.international>
This is a re-admission after prior archival of version 0.3.0 dated 2018-01-30
Diff between rpivotTable versions 0.3.0 dated 2018-01-30 and 0.4.0 dated 2026-08-24
DESCRIPTION | 31 LICENSE | 4 MD5 | 131 NAMESPACE | 14 R/locale.R | 82 R/rpivotTable.R | 448 +- README.md | 195 build/vignette.rds |binary inst/doc/NEWS.R | 6 inst/doc/NEWS.Rmd | 161 inst/doc/NEWS.html | 648 +- inst/doc/rpivotTableIntroduction.R | 85 inst/doc/rpivotTableIntroduction.Rmd | 221 inst/doc/rpivotTableIntroduction.html | 2885 ++++++------- inst/examples/canElections-shiny.R | 146 inst/examples/dynChangeParams.R | 134 inst/examples/examples.R | 198 inst/examples/inclexcl.R | 24 inst/examples/onRefresh-shiny.R | 114 inst/examples/sorting.R | 30 inst/htmlwidgets/lib/c3/c3.min.css | 2 inst/htmlwidgets/lib/c3/c3.min.js | 12 inst/htmlwidgets/lib/d3/LICENSE | 52 inst/htmlwidgets/lib/d3/d3.v3.min.js | 12 inst/htmlwidgets/lib/jquery/MIT-LICENSE.txt | 42 inst/htmlwidgets/lib/jquery/jquery.min.js | 10 inst/htmlwidgets/lib/jquery/jquery.min.map | 2 inst/htmlwidgets/lib/jqueryui/LICENSE.txt | 86 inst/htmlwidgets/lib/jqueryui/jquery-ui.min.css | 14 inst/htmlwidgets/lib/jqueryui/jquery-ui.min.js | 26 inst/htmlwidgets/lib/jqueryui/jquery.ui.touch-punch.min.js | 22 inst/htmlwidgets/lib/pivottable/c3_renderers.min.js | 4 inst/htmlwidgets/lib/pivottable/d3_renderers.min.js | 4 inst/htmlwidgets/lib/pivottable/export_renderers.min.js | 4 inst/htmlwidgets/lib/pivottable/gchart_renderers.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.cs.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.da.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.de.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.es.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.fr.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.it.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.nl.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.pl.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.pt.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.ru.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.sq.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.tr.min.js | 4 inst/htmlwidgets/lib/pivottable/pivot.zh.min.js | 4 inst/htmlwidgets/lib/polyfill/polyfill.min.js | 8 inst/htmlwidgets/lib/rpivotTable.css | 32 inst/htmlwidgets/lib/subtotal/subtotal.min.js | 4 inst/htmlwidgets/rpivotTable.js | 78 inst/htmlwidgets/rpivotTable.yaml | 112 man/change_locale.Rd | 80 man/figures |only man/renderRpivotTable.Rd | 62 man/rpivotTable.Rd | 247 - man/rpivotTableOutput.Rd | 52 tests/testthat.R | 10 tests/testthat/test_creation.R | 12 tests/testthat/test_data.R | 62 tests/testthat/test_locale.R | 20 tests/testthat/test_params.R | 106 vignettes/NEWS.Rmd | 161 vignettes/rpivotTableIntroduction.Rmd | 221 66 files changed, 3745 insertions(+), 3431 deletions(-)
Title: Approximation to the Survival Functions of Quadratic Forms of
Gaussian Variables
Description: Calculates the right-tail probability of quadratic forms of Gaussian variables
using the skewness-kurtosis ratio matching method, modified Liu-Tang-Zhang method and
Satterthwaite-Welch method. The technical details can be found in Hong Zhang, Judong Shen
and Zheyang Wu (2022) "A fast and accurate approximation to the distributions of quadratic
forms of Gaussian variables" <doi:10.1080/10618600.2021.2000423>.
Author: Hong Zhang [aut],
Judong Shen [aut],
Zheyang Wu [aut, cre]
Maintainer: Zheyang Wu <zheyangwu@wpi.edu>
Diff between Qapprox versions 0.2.0 dated 2021-07-07 and 0.2.1 dated 2026-08-24
DESCRIPTION | 24 ++++++++++++++++++------ MD5 | 3 ++- NEWS.md |only 3 files changed, 20 insertions(+), 7 deletions(-)
Title: Mechanistic Metacommunity Simulator
Description: A forward simulator for generating synthetic metacommunity data.
As an in silico experimental platform, it enables researchers to simulate
community shifts, test theoretical frameworks, and benchmark analytical
algorithms prior to empirical application. Key capabilities include
mechanistic simulations driven by demography, dispersal, and
interactions, GIS interoperability via the 'terra' package for dynamic
environments, and a virtual ecologist module that simulates imperfect
detection and survey errors to mimic real-world biodiversity data.
Author: Katarzyna Markowska [aut, cre, cph],
Lechoslaw Kuczynski [aut, cph]
Maintainer: Katarzyna Markowska <katarzyna.markowska@amu.edu.pl>
Diff between mrangr versions 1.0.1 dated 2026-01-25 and 1.0.2 dated 2026-08-24
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Title: Combines Changepoint Analysis with 'ggplot2'
Description: A unified, tidy, 'ggplot2'-native interface to changepoint
detection in R. Provides the 'ggcpt' S3 result class with
'broom'-style tidy/glance/augment methods, 'autoplot()' (with
confidence intervals, fitted signals, and multivariate facets),
composable geoms ('geom_changepoint()', 'geom_cpt_segment()',
'geom_cpt_ci()', 'stat_changepoint()'), and a 'cpt_detect()'
dispatcher covering over thirty methods with introspection via
'cpt_methods()': penalised/optimal partitioning (PELT, BinSeg,
SegNeigh, AMOC, FPOP, CROPS penalty paths, 'fastcpd', change-in-slope
via 'cpop'), multiscale and search methods (WBS, WBS2, NOT, MOSUM,
Isolate-Detect, TGUH, SMUCE/HSMUCE with confidence intervals),
nonparametric and kernel methods ('changepoint.np', 'ecp', 'kcpRS',
'CptNonPar', sequential 'cpm', self-normalisation via 'SNSeg'),
Bayesian methods ('bcp', online 'ocp', 'Rbeast'), high-dimensional
and multivariate methods ('InspectChangepoint', 'ocd',
'changepoint.geo'), regression breaks ('strucchange', [...truncated...]
Author: Youzhi Yu [aut, cre]
Maintainer: Youzhi Yu <yuyouzhi666@icloud.com>
Diff between ggchangepoint versions 0.3.0 dated 2026-06-26 and 0.4.0 dated 2026-08-24
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Title: Generalized Fisher's Combination Tests Under Dependence
Description: Accurate and computationally efficient p-value calculation methods for a general family of Fisher type statistics (GFisher). The GFisher covers Fisher's combination, Good's statistic, Lancaster's statistic, weighted Z-score combination, etc. It allows a flexible weighting scheme, as well as an omnibus procedure that automatically adapts proper weights and degrees of freedom to a given data. The new p-value calculation methods are based on novel ideas of moment-ratio matching and joint-distribution approximation. The technical details can be found in Hong Zhang and Zheyang Wu (2022) <doi:10.1111/biom.13634>.
Author: Hong Zhang [aut],
Zheyang Wu [aut, cre]
Maintainer: Zheyang Wu <zheyangwu@wpi.edu>
Diff between GFisher versions 0.2.0 dated 2022-03-01 and 0.2.1 dated 2026-08-24
DESCRIPTION | 18 ++++++++++++------ MD5 | 3 ++- NEWS.md |only 3 files changed, 14 insertions(+), 7 deletions(-)
Title: F1 Pit Stop Datasets
Description: Formula 1 pit stop data. The package provides information on teams and drivers across seasons (2018 or higher). It also includes a function to visualize pit stop performance.
Author: Jose Jordan-Soria [aut, cre]
Maintainer: Jose Jordan-Soria <jjose.jjordan@gmail.com>
Diff between f1pits versions 1.3.1 dated 2026-05-20 and 1.3.2 dated 2026-08-24
DESCRIPTION | 8 ++++---- MD5 | 18 +++++++++--------- NEWS.md | 10 +++++++++- R/pitplot.R | 1 + R/pits.R | 2 +- inst/CITATION | 2 +- inst/doc/f1pits-intro.Rmd | 6 +++--- inst/doc/f1pits-intro.html | 12 ++++++------ man/pits.Rd | 2 +- vignettes/f1pits-intro.Rmd | 6 +++--- 10 files changed, 38 insertions(+), 29 deletions(-)
Title: Synthetic Data Doubles for Safer Prototyping
Description: Creates synthetic data doubles from real datasets for prototyping,
teaching, 'shiny' development, and AI-assisted programming. Provides data
profiling, role detection, configurable synthesis, utility comparison, and
disclosure-risk warnings. Synthetic outputs are intended to reduce direct
disclosure risk, not to guarantee privacy.
Author: Lennon Li [aut, cre, cph]
Maintainer: Lennon Li <yeli@biostats.ai>
Diff between dataganger versions 0.8.0 dated 2026-08-21 and 0.8.2 dated 2026-08-24
DESCRIPTION | 10 MD5 | 102 - NEWS.md | 91 + R/detect-roles.R | 33 R/mod-upload.R | 6 R/synth-helpers.R | 307 ++++ R/synthesize-marginal.R | 17 build/vignette.rds |binary inst/WORDLIST | 4 inst/doc/privacy-and-ai-workflow.R | 242 +-- inst/doc/privacy-and-ai-workflow.html | 1729 ++++++++++++------------- man/dataganger-package.Rd | 4 tests/testthat/test-app-css.R | 2 tests/testthat/test-app-gate.R | 2 tests/testthat/test-assertion-diagnostics.R |only tests/testthat/test-cli-execution.R | 23 tests/testthat/test-cli-parser.R | 14 tests/testthat/test-cli-skill.R | 2 tests/testthat/test-code-readiness.R | 10 tests/testthat/test-compare-synthetic.R | 7 tests/testthat/test-detect-roles.R | 80 + tests/testthat/test-disclosure-helpers.R | 10 tests/testthat/test-enforce-kanon.R | 20 tests/testthat/test-ensure-levels.R | 20 tests/testthat/test-exact-match-flags.R | 18 tests/testthat/test-exact-missingness.R | 16 tests/testthat/test-export-synthetic.R | 8 tests/testthat/test-kanon-escape-routes.R | 2 tests/testthat/test-kanon-numeric.R | 19 tests/testthat/test-level-invariant.R | 21 tests/testthat/test-manifest-lens.R | 2 tests/testthat/test-mod-column-filter.R | 2 tests/testthat/test-mod-compare.R | 2 tests/testthat/test-mod-data-panel.R | 22 tests/testthat/test-mod-export.R | 2 tests/testthat/test-mod-generate.R | 30 tests/testthat/test-mod-profile.R | 7 tests/testthat/test-mod-roles.R | 40 tests/testthat/test-mod-synthesis-controls.R | 25 tests/testthat/test-mod-upload.R | 2 tests/testthat/test-no-network.R | 2 tests/testthat/test-postal-formats.R | 5 tests/testthat/test-privacy-check.R | 37 tests/testthat/test-role-override-disclosure.R | 2 tests/testthat/test-run-app.R | 2 tests/testthat/test-run-synthesis-async.R | 3 tests/testthat/test-source-portability.R |only tests/testthat/test-suspected-identifiers.R | 5 tests/testthat/test-synth-categorical.R | 42 tests/testthat/test-synth-postal.R | 43 tests/testthat/test-synth-spec.R | 5 tests/testthat/test-synthesize-data.R | 476 ++++++ tests/testthat/test-synthesize-synthpop.R | 2 53 files changed, 2310 insertions(+), 1267 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2026-05-18 0.1.12
2025-09-09 0.1.7
Title: Nonlinear Dependence and Lead-Lag Analysis via Chatterjee's Xi
Description: Computes Chatterjee's non-parametric correlation coefficient for time series data. It extends the original metric to time series analysis by providing the univariate Xi-Autocorrelation Function (Xi-ACF), directional Xi-Cross-Correlation Function (Xi-CCF), and multivariate network evaluation matrices. The package allows users to test for non-linear dependence using Iterative Amplitude Adjusted Fourier Transform (IAAFT) and Multivariate IAAFT (MIAAFT) surrogate data with strict Family-Wise Error Rate ('FWER') control via Max-statistic approaches. Methodologies are based on Chatterjee (2021) <doi:10.1080/01621459.2020.1758115>, surrogate data testing methods by Schreiber and Schmitz (1996) <doi:10.1103/PhysRevLett.77.635>, and local structural identification by Watanabe (2026) <doi:10.2139/ssrn.6829431>.
Author: Yasunori Watanabe [aut, cre]
Maintainer: Yasunori Watanabe <watanabe.yasunori@outlook.com>
Diff between xiacf versions 0.6.2 dated 2026-06-02 and 0.6.5 dated 2026-08-24
xiacf-0.6.2/xiacf/man/surrogate_miaaft_cpp.Rd |only xiacf-0.6.5/xiacf/DESCRIPTION | 10 - xiacf-0.6.5/xiacf/MD5 | 35 ++-- xiacf-0.6.5/xiacf/NEWS.md | 20 ++ xiacf-0.6.5/xiacf/R/RcppExports.R | 13 - xiacf-0.6.5/xiacf/R/deprecated.R | 9 + xiacf-0.6.5/xiacf/R/xi_rolling_acf.R | 28 +++ xiacf-0.6.5/xiacf/R/xi_rolling_ccf.R | 24 +++ xiacf-0.6.5/xiacf/README.md | 137 ++++++++++--------- xiacf-0.6.5/xiacf/man/figures/README-xi-acf-1.png |binary xiacf-0.6.5/xiacf/man/figures/README-xi-ccf-1.png |binary xiacf-0.6.5/xiacf/man/figures/README-xi-matrix-1.png |binary xiacf-0.6.5/xiacf/man/figures/README-xi-matrix-2.png |binary xiacf-0.6.5/xiacf/man/reexports.Rd | 2 xiacf-0.6.5/xiacf/man/xiacf-deprecated.Rd | 3 xiacf-0.6.5/xiacf/src/RcppExports.cpp | 14 - xiacf-0.6.5/xiacf/src/surrogate_gen.cpp | 77 +++++----- xiacf-0.6.5/xiacf/src/testing_engine.cpp | 25 ++- xiacf-0.6.5/xiacf/src/xi_math.cpp | 2 19 files changed, 240 insertions(+), 159 deletions(-)
Title: Automatic Machine Learning with 'tidymodels'
Description: The goal of this package will be to provide a simple interface for automatic machine learning that fits the 'tidymodels' framework. The intention is to work for regression and classification problems with a simple verb framework.
Author: Steven Sanderson [aut, cre, cph]
Maintainer: Steven Sanderson <spsanderson@gmail.com>
Diff between tidyAML versions 0.0.6 dated 2025-05-12 and 0.0.8 dated 2026-08-24
DESCRIPTION | 8 MD5 | 84 +-- NAMESPACE | 94 +++ NEWS.md | 23 R/internals-make-spec-tbl.R | 22 R/internals-model-builders-classification.R |only R/internals-model-builders-regression.R |only R/utils-lib-loads.R | 28 - R/zzz.R | 6 README.md | 657 ++++++++++++-------------- build/vignette.rds |binary inst/doc/getting-started.html | 54 +- man/check_duplicate_rows.Rd | 22 man/core_packages.Rd | 22 man/create_model_spec.Rd | 6 man/create_splits.Rd | 22 man/create_workflow_set.Rd | 22 man/extract_model_spec.Rd | 14 man/extract_regression_residuals.Rd | 14 man/extract_tunable_params.Rd | 14 man/extract_wflw.Rd | 14 man/extract_wflw_fit.Rd | 14 man/extract_wflw_pred.Rd | 14 man/fast_classification.Rd | 6 man/fast_classification_parsnip_spec_tbl.Rd | 22 man/fast_regression.Rd | 6 man/fast_regression_parsnip_spec_tbl.Rd | 22 man/full_internal_make_wflw.Rd | 22 man/get_model.Rd | 14 man/install_deps.Rd | 22 man/internal_make_fitted_wflw.Rd | 18 man/internal_make_spec_tbl.Rd | 18 man/internal_make_wflw.Rd | 18 man/internal_make_wflw_gee_lin_reg.Rd | 18 man/internal_make_wflw_predictions.Rd | 18 man/internal_model_builders_classification.Rd |only man/internal_model_builders_regression.Rd |only man/internal_set_args_to_tune.Rd | 18 man/load_deps.Rd | 22 man/make_classification_base_tbl.Rd | 18 man/make_regression_base_tbl.Rd | 18 man/match_args.Rd | 22 man/plot_regression_predictions.Rd | 4 man/plot_regression_residuals.Rd | 4 man/quantile_normalize.Rd | 22 45 files changed, 808 insertions(+), 678 deletions(-)
Title: Calculate How many Imputations are Needed for Multiple
Imputation
Description: When performing multiple imputations, while 5-10 imputations are
sufficient for obtaining point estimates, a larger number of
imputations are needed for proper standard error estimates.
This package allows you to calculate how many imputations are
needed, following the work of von Hippel (2020)
<doi:10.1177/0049124117747303>.
Author: Josh Errickson [aut, cre]
Maintainer: Josh Errickson <jerrick@umich.edu>
Diff between howManyImputations versions 0.2.5 dated 2024-03-15 and 0.2.6 dated 2026-08-24
howManyImputations-0.2.5/howManyImputations/inst/tinytest |only howManyImputations-0.2.5/howManyImputations/tests/tinytest.R |only howManyImputations-0.2.6/howManyImputations/DESCRIPTION | 11 ++++++----- howManyImputations-0.2.6/howManyImputations/MD5 | 8 ++++---- howManyImputations-0.2.6/howManyImputations/NEWS.md | 4 ++++ howManyImputations-0.2.6/howManyImputations/tests/testthat |only howManyImputations-0.2.6/howManyImputations/tests/testthat.R |only 7 files changed, 14 insertions(+), 9 deletions(-)
More information about howManyImputations at CRAN
Permanent link
Title: Taichi-Diagram Visualization for Two Data Sources
Description: A data visualization design that compares two (usually on a par
with each other) data sources on one grid of taichi (yin-yang) diagrams,
where the two interlocking fish of every symbol are filled by the two
sources, while inheriting 'ggplot2' features.
Author: Youzhi Yu [aut, cre]
Maintainer: Youzhi Yu <yuyouzhi666@icloud.com>
Diff between ggtaichi versions 0.1.0 dated 2026-06-24 and 0.2.0 dated 2026-08-24
DESCRIPTION | 21 MD5 | 77 +- NAMESPACE | 8 NEWS.md | 188 ++++++ R/data.R | 93 ++- R/geom-taichi.R | 962 +++++++++++++++++++++++++++++------ R/ggtaichi-package.R | 6 R/remove-padding.R | 96 ++- R/theme-options.R | 51 + README.md | 147 ++++- build/vignette.rds |binary data/cafes_tg.rda |only inst/doc/animations.R |only inst/doc/animations.Rmd |only inst/doc/animations.html |only inst/doc/ggtaichi.R | 103 +++ inst/doc/ggtaichi.Rmd | 238 ++++++++ inst/doc/ggtaichi.html | 247 ++++++++ man/cafes_tg.Rd |only man/figures/README-anatomy-1.png |binary man/figures/README-categorical-1.png |only man/figures/README-eyes-1.png |only man/figures/README-palettes-1.png |binary man/figures/README-pitts-small-1.png |binary man/figures/README-rotation-1.png |only man/figures/README-shared-1.png |only man/figures/README-states-1.png |binary man/figures/logo.png |only man/geom_taichi.Rd | 239 +++++++- man/geom_yin_fish.Rd |only man/ggtaichi-ggproto.Rd |only man/ggtaichi-package.Rd | 3 man/pitts_emojis.Rd | 28 - man/pitts_tg.Rd | 18 man/remove_padding.Rd | 50 + man/states_tg.Rd | 23 man/theme_taichi.Rd | 25 tests |only vignettes/animations.Rmd |only vignettes/ggtaichi.Rmd | 238 ++++++++ 40 files changed, 2472 insertions(+), 389 deletions(-)
Title: MR Spectroscopy Analysis Tools
Description: Tools for reading, visualising and processing Magnetic Resonance
Spectroscopy data. The package includes methods for spectral fitting: Wilson
(2021) <DOI:10.1002/mrm.28385>, Wilson (2025) <DOI:10.1002/mrm.30462> and
spectral alignment: Wilson (2018) <DOI:10.1002/mrm.27605>.
Author: Martin Wilson [cre, aut] ,
Yong Wang [ctb],
John Muschelli [ctb]
Maintainer: Martin Wilson <martin.wilson111@gmail.com>
Diff between spant versions 4.3.0 dated 2026-07-07 and 4.4.0 dated 2026-08-24
DESCRIPTION | 8 +- MD5 | 33 ++++---- NAMESPACE | 3 NEWS.md | 6 + R/fit_svs.R | 8 +- R/fmrs.R | 76 +++++++++++++++---- R/image_reg.R | 5 + R/mrs_data_proc.R | 103 +++++++++++++++++++++++++ R/mrs_read_spar_sdat.R | 10 ++ build/vignette.rds |binary inst/doc/abfit-baseline-opts.html | 12 +-- inst/doc/spant-basis-simulation.html | 8 +- inst/doc/spant-intro.html | 120 +++++++++++++++--------------- inst/doc/spant-metabolite-simulation.html | 10 +- inst/doc/spant-preprocessing.html | 14 +-- man/gen_spline_reg.Rd |only man/mr_data2bids.Rd | 5 + man/set_spec_values.Rd |only man/zero_spec_threshold.Rd |only 19 files changed, 302 insertions(+), 119 deletions(-)
Title: Classes and Methods for Spatio-Temporal Data
Description: Classes and methods for spatio-temporal data, including space-time regular lattices, sparse lattices, irregular data, and trajectories; utility functions for plotting data as map sequences (lattice or animation) or multiple time series; methods for spatial and temporal selection and subsetting, as well as for spatial/temporal/spatio-temporal matching or aggregation, retrieving coordinates, print, summary, etc.
Author: Edzer Pebesma [aut, cre] ,
Benedikt Graeler [ctb],
Tom Gottfried [ctb],
Robert J. Hijmans [ctb]
Maintainer: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Diff between spacetime versions 1.3-3 dated 2025-02-13 and 1.3-4 dated 2026-08-24
spacetime-1.3-3/spacetime/R/raster.R |only spacetime-1.3-4/spacetime/DESCRIPTION | 11 +- spacetime-1.3-4/spacetime/MD5 | 43 +++---- spacetime-1.3-4/spacetime/build/vignette.rds |binary spacetime-1.3-4/spacetime/data/air.rda |binary spacetime-1.3-4/spacetime/data/fires.rda |binary spacetime-1.3-4/spacetime/inst/doc/jss816.R | 124 +++++++++++------------ spacetime-1.3-4/spacetime/inst/doc/jss816.Rnw | 24 +--- spacetime-1.3-4/spacetime/inst/doc/jss816.pdf |binary spacetime-1.3-4/spacetime/inst/doc/sto.R | 42 +++---- spacetime-1.3-4/spacetime/inst/doc/sto.Rnw | 13 -- spacetime-1.3-4/spacetime/inst/doc/sto.pdf |binary spacetime-1.3-4/spacetime/inst/doc/stpg.R | 36 +++--- spacetime-1.3-4/spacetime/inst/doc/stpg.Rnw | 12 -- spacetime-1.3-4/spacetime/inst/doc/stpg.pdf |binary spacetime-1.3-4/spacetime/inst/doc/stsubs.R | 2 spacetime-1.3-4/spacetime/inst/doc/stsubs.pdf |binary spacetime-1.3-4/spacetime/tests/raster.R | 2 spacetime-1.3-4/spacetime/tests/raster.Rout.save | 10 - spacetime-1.3-4/spacetime/vignettes/jss816.Rnw | 24 +--- spacetime-1.3-4/spacetime/vignettes/jss816.bib | 47 +++----- spacetime-1.3-4/spacetime/vignettes/sto.Rnw | 13 -- spacetime-1.3-4/spacetime/vignettes/stpg.Rnw | 12 -- 23 files changed, 186 insertions(+), 229 deletions(-)
Title: Optimized Integer Risk Score Models
Description: Implements an optimized approach to learning risk score models, where sparsity and integer constraints are integrated into the model-fitting process.
Author: Hannah Eglinton [aut, cre],
Seehanah Tang [aut, aut],
Alice Paul [aut, cph],
Oscar Yan [aut],
R Core Team [ctb, cph] ,
Robert Gentleman [ctb, cph] ,
Ross Ihaka [ctb, cph] ,
Simon Davies [ctb] ),
Thomas Lumley [ctb] )
Maintainer: Hannah Eglinton <eglintonh@gmail.com>
Diff between riskscores versions 1.2.3 dated 2025-07-28 and 1.3.0 dated 2026-08-24
DESCRIPTION | 8 - MD5 | 33 +++---- NAMESPACE | 1 R/cv_risk_mod.R | 59 +++++++----- R/generic.R | 70 ++++++++++----- R/helpers.R | 43 +++++++++ R/risk_mod.R | 36 +++++-- R/utils.R | 16 ++- inst/doc/riskscores.R | 7 + inst/doc/riskscores.Rmd | 31 ++++-- inst/doc/riskscores.html | 202 ++++++++++++++++++++++---------------------- man/cv_risk_mod.Rd | 18 ++- man/get_metrics_internal.Rd | 6 - man/plot.cv_risk_mod.Rd | 3 man/predict.risk_mod.Rd | 22 ++++ man/prevalence_adjust.Rd |only man/risk_mod.Rd | 8 + vignettes/riskscores.Rmd | 31 ++++-- 18 files changed, 385 insertions(+), 209 deletions(-)
Title: Convert Images to Spatially Referenced 'SpatRaster' Objects
Description: Convert digital images to spatially referenced 'SpatRaster'
objects, as defined by the 'terra' package, using coordinates from
supported spatial input classes. Supported inputs include numeric
coordinate vectors and objects from the 'sf', 'terra' and 'stars'
packages. The main function is an S3 generic, allowing other packages
to extend support to additional spatial classes.
Author: Diego Hernangomez [aut, cre, cph]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between rasterpic versions 0.5.1 dated 2026-06-23 and 1.0.0 dated 2026-08-24
rasterpic-0.5.1/rasterpic/R/asp_ratio.R |only rasterpic-0.5.1/rasterpic/R/rasterpic_img.R |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/crop_mask.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/errors_messages.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/nlayers.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/online.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/s3.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/sfg.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/spatextent.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/stars.md |only rasterpic-0.5.1/rasterpic/tests/testthat/_snaps/vector.md |only rasterpic-0.5.1/rasterpic/tests/testthat/helpers.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-alignment.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-asp_ratio.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-bbox.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-crop_mask.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-errors_messages.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-expand.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-fileformat.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-nlayers.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-online.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-s3.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-sfg.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-spatextent.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-stars.R |only rasterpic-0.5.1/rasterpic/tests/testthat/test-vector.R |only rasterpic-1.0.0/rasterpic/DESCRIPTION | 14 rasterpic-1.0.0/rasterpic/LICENSE | 2 rasterpic-1.0.0/rasterpic/MD5 | 66 +--- rasterpic-1.0.0/rasterpic/NEWS.md | 24 + rasterpic-1.0.0/rasterpic/R/asp-ratio.R |only rasterpic-1.0.0/rasterpic/R/rasterpic-img.R |only rasterpic-1.0.0/rasterpic/R/rasterpic-package.R | 2 rasterpic-1.0.0/rasterpic/R/utils.R | 160 ++++++++-- rasterpic-1.0.0/rasterpic/README.md | 16 - rasterpic-1.0.0/rasterpic/build/vignette.rds |binary rasterpic-1.0.0/rasterpic/inst/doc/rasterpic.html | 13 rasterpic-1.0.0/rasterpic/inst/doc/rasterpic.qmd | 4 rasterpic-1.0.0/rasterpic/inst/schemaorg.json | 8 rasterpic-1.0.0/rasterpic/man/asp_ratio.Rd | 13 rasterpic-1.0.0/rasterpic/man/rasterpic-package.Rd | 2 rasterpic-1.0.0/rasterpic/man/rasterpic_img.Rd | 52 ++- rasterpic-1.0.0/rasterpic/man/roxygen |only rasterpic-1.0.0/rasterpic/tests/testthat/_snaps/asp-ratio.md |only rasterpic-1.0.0/rasterpic/tests/testthat/_snaps/rasterpic-img.md |only rasterpic-1.0.0/rasterpic/tests/testthat/_snaps/utils.md |only rasterpic-1.0.0/rasterpic/tests/testthat/helper.R |only rasterpic-1.0.0/rasterpic/tests/testthat/test-asp-ratio.R |only rasterpic-1.0.0/rasterpic/tests/testthat/test-rasterpic-img-formats.R |only rasterpic-1.0.0/rasterpic/tests/testthat/test-rasterpic-img-placement.R |only rasterpic-1.0.0/rasterpic/tests/testthat/test-rasterpic-img.R |only rasterpic-1.0.0/rasterpic/tests/testthat/test-utils.R |only rasterpic-1.0.0/rasterpic/vignettes/rasterpic.qmd | 4 53 files changed, 254 insertions(+), 126 deletions(-)
Title: Evolutionary Transcriptomics
Description: Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.
Author: Hajk-Georg Drost [aut, cre] ,
Stefan Manolache [aut, ctb] ,
Jaruwatana Sodai Lotharukpong [aut, ctb] ,
Nikola Kalabova [aut, ctb] ,
Filipa Martins Costa [aut, ctb],
Kristian K Ullrich [aut, ctb]
Maintainer: Hajk-Georg Drost <hajk-georg.drost@tuebingen.mpg.de>
Diff between myTAI versions 2.3.6 dated 2026-05-28 and 2.3.7 dated 2026-08-24
DESCRIPTION | 12 +++---- MD5 | 26 +++++++-------- NEWS.md | 4 ++ R/plot_signature_multiple.R | 3 - inst/doc/myTAI.html | 2 - inst/doc/other-strata.html | 4 +- inst/doc/phylo-expression-object.html | 4 +- inst/doc/phylostratigraphy.Rmd | 2 - inst/doc/phylostratigraphy.html | 4 +- inst/doc/tai-gallery.html | 54 ++++++++++++++++---------------- inst/doc/tai-stats.html | 56 +++++++++++++++++----------------- inst/doc/tai-transform.html | 16 ++++----- man/plot_signature.Rd | 5 --- vignettes/phylostratigraphy.Rmd | 2 - 14 files changed, 96 insertions(+), 98 deletions(-)
Title: A Lightweight, Modern and Flexible Logging Utility
Description: Inspired by the the 'futile.logger' R package and 'logging'
Python module, this utility provides a flexible and extensible way of
formatting and delivering log messages with low overhead.
Author: Gergely Daroczi [aut, cre] ,
Hadley Wickham [aut] ,
Jonathan Carroll [ctb] ,
Spare Cores [fnd],
System1 [fnd]
Maintainer: Gergely Daroczi <daroczig@rapporter.net>
Diff between logger versions 0.4.2 dated 2026-05-10 and 0.4.3 dated 2026-08-24
DESCRIPTION | 10 MD5 | 96 +++---- NAMESPACE | 16 - NEWS.md | 6 inst/doc/Intro.html | 38 +- inst/doc/anatomy.html | 12 inst/doc/customize_logger.html | 76 ++--- inst/doc/migration.R | 172 ++++++++++++ inst/doc/migration.Rmd | 36 +- inst/doc/migration.html | 520 ++++++++++++++++++++++++++++++++++++++- inst/doc/r_packages.html | 15 - man/appender_async.Rd | 22 - man/appender_console.Rd | 22 - man/appender_file.Rd | 22 - man/appender_kinesis.Rd | 22 - man/appender_ntfy.Rd | 22 - man/appender_pushbullet.Rd | 22 - man/appender_slack.Rd | 22 - man/appender_stdout.Rd | 22 - man/appender_syslog.Rd | 24 - man/appender_tee.Rd | 22 - man/appender_telegram.Rd | 22 - man/colorize_by_log_level.Rd | 2 man/formatter_cli.Rd | 18 - man/formatter_glue.Rd | 18 - man/formatter_glue_or_sprintf.Rd | 18 - man/formatter_glue_safe.Rd | 18 - man/formatter_json.Rd | 18 - man/formatter_logging.Rd | 18 - man/formatter_pander.Rd | 18 - man/formatter_paste.Rd | 18 - man/formatter_sprintf.Rd | 18 - man/get_logger_meta_variables.Rd | 20 - man/layout_blank.Rd | 20 - man/layout_gha.Rd | 20 - man/layout_glue.Rd | 20 - man/layout_glue_colors.Rd | 22 - man/layout_glue_generator.Rd | 20 - man/layout_json.Rd | 20 - man/layout_json_parser.Rd | 20 - man/layout_logging.Rd | 20 - man/layout_simple.Rd | 20 - man/log_appender.Rd | 8 man/log_formatter.Rd | 8 man/log_layout.Rd | 8 man/log_levels.Rd | 2 man/log_threshold.Rd | 8 man/logger-package.Rd | 1 vignettes/migration.Rmd | 36 +- 49 files changed, 1191 insertions(+), 487 deletions(-)
Title: Seamless Access to IMF World Economic Outlook (WEO) Data
Description: Provides tools to download, process, and analyze data from the
International Monetary Fund's World Economic Outlook (WEO)
<https://www.imf.org/en/publications/weo>.
Functions support downloading complete WEO releases, accessing specific
economic indicators for selected countries, and listing available data.
Author: Teal Emery [aut, cre],
Teal Insights [cph],
Christoph Scheuch [aut]
Maintainer: Teal Emery <lte@tealinsights.com>
Diff between imfweo versions 0.1.0 dated 2025-08-22 and 0.2.0 dated 2026-08-24
imfweo-0.1.0/imfweo/R/weo_get_latest_publication.R |only imfweo-0.1.0/imfweo/man/weo_get_latest_publication.Rd |only imfweo-0.1.0/imfweo/tests/testthat/test-weo_get_latest_publication.R |only imfweo-0.2.0/imfweo/DESCRIPTION | 16 imfweo-0.2.0/imfweo/MD5 | 48 - imfweo-0.2.0/imfweo/NAMESPACE | 2 imfweo-0.2.0/imfweo/NEWS.md | 38 imfweo-0.2.0/imfweo/R/imfweo-package.R | 2 imfweo-0.2.0/imfweo/R/utils.R | 3 imfweo-0.2.0/imfweo/R/weo_bulk.R | 404 ++++++---- imfweo-0.2.0/imfweo/R/weo_get.R | 19 imfweo-0.2.0/imfweo/R/weo_list_publications.R | 65 - imfweo-0.2.0/imfweo/R/weo_releases.R |only imfweo-0.2.0/imfweo/R/zzz.R | 2 imfweo-0.2.0/imfweo/README.md | 159 ++- imfweo-0.2.0/imfweo/man/imfweo-package.Rd | 2 imfweo-0.2.0/imfweo/man/weo_get.Rd | 2 imfweo-0.2.0/imfweo/man/weo_get_entities.Rd | 2 imfweo-0.2.0/imfweo/man/weo_get_series.Rd | 2 imfweo-0.2.0/imfweo/man/weo_list_publications.Rd | 28 imfweo-0.2.0/imfweo/tests/testthat/fixtures |only imfweo-0.2.0/imfweo/tests/testthat/test-utils.R | 4 imfweo-0.2.0/imfweo/tests/testthat/test-weo_bulk.R | 301 +++++++ imfweo-0.2.0/imfweo/tests/testthat/test-weo_get.R | 115 ++ imfweo-0.2.0/imfweo/tests/testthat/test-weo_list_publications.R | 51 - imfweo-0.2.0/imfweo/tests/testthat/test-weo_releases.R |only imfweo-0.2.0/imfweo/tests/testthat/test-zzz.R | 7 27 files changed, 905 insertions(+), 367 deletions(-)
Title: Curated Agentic Harnesses for R Professional Roles
Description: A bootstrapper that launches a command-line coding agent of the
user's choice in a terminal tab pre-configured for a professional R role.
Each role is described by a curated harness: a subset of community skills,
a system prompt, a folder layout, and quality gates. The package does not
run an agent loop and does not call a language model; it discovers the
chosen coder binary, generates its configuration, links the curated skills,
and opens the terminal. Code written by the agent is run manually by the
user, by design, so that every generated script passes through a human
audit gate before execution.
Author: Pedro Carvalho Brom [aut, cre, cph]
Maintainer: Pedro Carvalho Brom <pcbrom@gmail.com>
Diff between harness versions 0.1.0 dated 2026-06-09 and 0.2.0 dated 2026-08-24
DESCRIPTION | 6 +-- MD5 | 19 ++++++----- NAMESPACE | 1 NEWS.md | 27 +++++++++++++++ R/editor_bridge.R |only R/launch.R | 52 ++++++++++++++++++++++++------ R/session.R |only R/utils.R | 61 +++++++++++++++++++++++++++++++++++ README.md | 62 +++++++++++++++++++++++++++++++++--- inst/rstudio |only man/send_selection_to_coder.Rd |only tests/testthat/test-editor-bridge.R |only tests/testthat/test-utils.R | 18 ++++++++++ 13 files changed, 222 insertions(+), 24 deletions(-)
Title: Convert Gene IDs Between Each Other and Fetch Annotations from
Biomart
Description: Gene Symbols or Ensembl Gene IDs are converted using the Bimap interface in 'AnnotationDbi' in convertId2()
for the most common use cases in data analysis. The main function in the package is convert.bm() which queries BioMart
using the full capacity of the API provided through the 'biomaRt' package. Presets and defaults are provided for
convenience but all "marts", "filters" and "attributes" can be set by the user. Function convert.alias() converts
Gene Symbols to Aliases and vice versa and function likely_symbol() attempts to determine the most likely current Gene Symbol.
Author: Vidal Fey [aut, cre],
Henrik Edgren [aut]
Maintainer: Vidal Fey <vidal.fey@gmail.com>
Diff between convertid versions 0.3.4 dated 2026-07-20 and 0.4.0 dated 2026-08-24
convertid-0.3.4/convertid/man/try_biomart.Rd |only convertid-0.4.0/convertid/DESCRIPTION | 19 convertid-0.4.0/convertid/MD5 | 69 +- convertid-0.4.0/convertid/NEWS.md |only convertid-0.4.0/convertid/R/biomart.R | 46 + convertid-0.4.0/convertid/R/convertId2.R | 292 +++++++--- convertid-0.4.0/convertid/R/dedup_filters.R |only convertid-0.4.0/convertid/R/get.bm.R | 19 convertid-0.4.0/convertid/R/likely_symbol.R | 102 ++- convertid-0.4.0/convertid/R/unexported.R | 37 - convertid-0.4.0/convertid/R/unify_gene_ids.R | 270 ++++----- convertid-0.4.0/convertid/man/convert.alias.Rd | 6 convertid-0.4.0/convertid/man/convert.bm.Rd | 2 convertid-0.4.0/convertid/man/convertId2.Rd | 60 +- convertid-0.4.0/convertid/man/convertid.Rd | 8 convertid-0.4.0/convertid/man/dot-addToCache.Rd | 5 convertid-0.4.0/convertid/man/dot-apply_filters.Rd |only convertid-0.4.0/convertid/man/dot-biomartCacheLocation.Rd |only convertid-0.4.0/convertid/man/dot-checkEnsemblSSL.Rd |only convertid-0.4.0/convertid/man/dot-checkInCache.Rd | 15 convertid-0.4.0/convertid/man/dot-dedup_gene_ids.Rd |only convertid-0.4.0/convertid/man/dot-ensg_in_list.Rd |only convertid-0.4.0/convertid/man/dot-filter_drop_ensg_symbol.Rd |only convertid-0.4.0/convertid/man/dot-filter_ensg2_first.Rd |only convertid-0.4.0/convertid/man/dot-filter_ensg_not_in_list.Rd |only convertid-0.4.0/convertid/man/dot-filter_has_ensg2.Rd |only convertid-0.4.0/convertid/man/dot-filter_has_symbol2.Rd |only convertid-0.4.0/convertid/man/dot-filter_last_resort.Rd |only convertid-0.4.0/convertid/man/dot-filter_prefer_confirmed.Rd |only convertid-0.4.0/convertid/man/dot-filter_symbol2_matches_name.Rd |only convertid-0.4.0/convertid/man/dot-filter_symbol_matches_gene_name.Rd |only convertid-0.4.0/convertid/man/dot-filter_symbol_matches_name.Rd |only convertid-0.4.0/convertid/man/dot-filter_symbols_agree.Rd |only convertid-0.4.0/convertid/man/dot-get_term.Rd |only convertid-0.4.0/convertid/man/dot-keep.Rd |only convertid-0.4.0/convertid/man/dot-readFromCache.Rd | 4 convertid-0.4.0/convertid/man/dot-resolve_multi.Rd |only convertid-0.4.0/convertid/man/dot-safe_get1.Rd |only convertid-0.4.0/convertid/man/dot-split_hgnc.Rd |only convertid-0.4.0/convertid/man/dot-test_ensembl.Rd |only convertid-0.4.0/convertid/man/dot-try_biomart.Rd |only convertid-0.4.0/convertid/man/likely_symbol.Rd | 8 convertid-0.4.0/convertid/man/todisp2.Rd | 16 convertid-0.4.0/convertid/man/unify_gene_ids.Rd | 9 convertid-0.4.0/convertid/tests/testthat/helper-biomart.R |only convertid-0.4.0/convertid/tests/testthat/test-convert.bm.R | 2 convertid-0.4.0/convertid/tests/testthat/test-convertId2.R | 96 +++ convertid-0.4.0/convertid/tests/testthat/test-likely_symbol.R | 144 ++++ convertid-0.4.0/convertid/tests/testthat/test-unify_gene_ids.R | 251 +++++--- 49 files changed, 1039 insertions(+), 441 deletions(-)
Title: Access College Football Play by Play Data
Description: A utility to quickly obtain clean and tidy college football
data. Serves as a wrapper around the
<https://collegefootballdata.com/> API and provides functions to
access live play by play and box score data from ESPN
<https://www.espn.com> when available. It provides users the
capability to access a plethora of endpoints, and supplement that data
with additional information (Expected Points Added/Win Probability
added).
Author: Saiem Gilani [cre, aut] ,
Akshay Easwaran [aut],
Jared Lee [aut],
Eric Hess [aut],
Michael Egle [ctb],
Nate Manzo [ctb],
Jason DeLoach [ctb],
Tej Seth [ctb],
Conor McQuiston [ctb],
Tan Ho [ctb],
Keegan Abdoo [ctb],
Matt Spencer [ctb],
Sebastian Carl [...truncated...]
Maintainer: Saiem Gilani <saiem.gilani@gmail.com>
Diff between cfbfastR versions 2.0.0 dated 2025-09-09 and 3.0.0 dated 2026-08-24
cfbfastR-2.0.0/cfbfastR/R/espn_cfb_pbp.R |only cfbfastR-2.0.0/cfbfastR/R/espn_cfb_player_stats.R |only cfbfastR-2.0.0/cfbfastR/R/espn_cfb_team_stats.R |only cfbfastR-2.0.0/cfbfastR/R/espn_metrics_wp.R |only cfbfastR-2.0.0/cfbfastR/R/espn_ratings_fpi.R |only cfbfastR-2.0.0/cfbfastR/R/espn_scoreboard.R |only cfbfastR-3.0.0/cfbfastR/DESCRIPTION | 39 cfbfastR-3.0.0/cfbfastR/LICENSE | 4 cfbfastR-3.0.0/cfbfastR/MD5 | 667 + cfbfastR-3.0.0/cfbfastR/NAMESPACE | 529 - cfbfastR-3.0.0/cfbfastR/NEWS.md | 745 + cfbfastR-3.0.0/cfbfastR/R/cfbd_api_key.R | 220 cfbfastR-3.0.0/cfbfastR/R/cfbd_betting.R | 449 - cfbfastR-3.0.0/cfbfastR/R/cfbd_coaches.R | 584 + cfbfastR-3.0.0/cfbfastR/R/cfbd_conferences.R | 336 cfbfastR-3.0.0/cfbfastR/R/cfbd_draft.R | 524 - cfbfastR-3.0.0/cfbfastR/R/cfbd_drives.R | 324 cfbfastR-3.0.0/cfbfastR/R/cfbd_games.R | 3336 +++---- cfbfastR-3.0.0/cfbfastR/R/cfbd_info.R |only cfbfastR-3.0.0/cfbfastR/R/cfbd_metrics.R | 2460 ++--- cfbfastR-3.0.0/cfbfastR/R/cfbd_pbp_data.R | 4387 +++++----- cfbfastR-3.0.0/cfbfastR/R/cfbd_pbp_data_v2.R |only cfbfastR-3.0.0/cfbfastR/R/cfbd_play.R | 2040 ++-- cfbfastR-3.0.0/cfbfastR/R/cfbd_players.R | 818 + cfbfastR-3.0.0/cfbfastR/R/cfbd_playoffs.R |only cfbfastR-3.0.0/cfbfastR/R/cfbd_ratings.R | 1541 ++- cfbfastR-3.0.0/cfbfastR/R/cfbd_recruiting.R | 839 - cfbfastR-3.0.0/cfbfastR/R/cfbd_stats.R | 2235 ++--- cfbfastR-3.0.0/cfbfastR/R/cfbd_teams.R | 1276 +- cfbfastR-3.0.0/cfbfastR/R/cfbd_venues.R | 158 cfbfastR-3.0.0/cfbfastR/R/cfbfastR-package.R | 1 cfbfastR-3.0.0/cfbfastR/R/create_epa.R | 1122 +- cfbfastR-3.0.0/cfbfastR/R/create_wpa_naive.R | 458 - cfbfastR-3.0.0/cfbfastR/R/data.R | 70 cfbfastR-3.0.0/cfbfastR/R/espn_cfb_catalog.R |only cfbfastR-3.0.0/cfbfastR/R/espn_cfb_game.R |only cfbfastR-3.0.0/cfbfastR/R/espn_cfb_player.R |only cfbfastR-3.0.0/cfbfastR/R/espn_cfb_ratings.R |only cfbfastR-3.0.0/cfbfastR/R/espn_cfb_schedule.R |only cfbfastR-3.0.0/cfbfastR/R/espn_cfb_season.R |only cfbfastR-3.0.0/cfbfastR/R/espn_cfb_team.R |only cfbfastR-3.0.0/cfbfastR/R/fox_cfb.R |only cfbfastR-3.0.0/cfbfastR/R/helper_pbp_add_player_cols.R | 904 +- cfbfastR-3.0.0/cfbfastR/R/helper_pbp_add_yardage.R | 498 - cfbfastR-3.0.0/cfbfastR/R/helper_pbp_air_yards.R |only cfbfastR-3.0.0/cfbfastR/R/helper_pbp_attach_player_ids.R |only cfbfastR-3.0.0/cfbfastR/R/helper_pbp_attribution.R |only cfbfastR-3.0.0/cfbfastR/R/helper_pbp_boxscore_parity.R |only cfbfastR-3.0.0/cfbfastR/R/helper_pbp_clean_pbp_dat.R | 1130 +- cfbfastR-3.0.0/cfbfastR/R/helper_pbp_join_participants.R |only cfbfastR-3.0.0/cfbfastR/R/helper_pbp_penalty_detection.R | 332 cfbfastR-3.0.0/cfbfastR/R/helper_pbp_penalty_enforcement.R |only cfbfastR-3.0.0/cfbfastR/R/helper_pbp_sidecar.R |only cfbfastR-3.0.0/cfbfastR/R/load_cfb.R | 230 cfbfastR-3.0.0/cfbfastR/R/load_cfb_datasets.R |only cfbfastR-3.0.0/cfbfastR/R/load_cfb_pbp.R | 473 - cfbfastR-3.0.0/cfbfastR/R/load_espn_cfb.R |only cfbfastR-3.0.0/cfbfastR/R/load_ncaa_mfb.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_adapters.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_add_play_counts.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_clean_drive_dat.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_clean_pbp_dat.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_create_epa.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_create_wpa_naive.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_engine_switch.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_epa_wpa_engine.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_output_schema.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_prep_epa_df_after.R |only cfbfastR-3.0.0/cfbfastR/R/pbp_taxonomy.R |only cfbfastR-3.0.0/cfbfastR/R/utils.R | 768 + cfbfastR-3.0.0/cfbfastR/R/utils_attach_query_meta.R |only cfbfastR-3.0.0/cfbfastR/R/yahoo_cfb.R |only cfbfastR-3.0.0/cfbfastR/R/zzz.R | 158 cfbfastR-3.0.0/cfbfastR/README.md | 441 - cfbfastR-3.0.0/cfbfastR/data/min_year_map_df.rda |only cfbfastR-3.0.0/cfbfastR/inst |only cfbfastR-3.0.0/cfbfastR/man/cfbd_api_key.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_betting.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_betting_ats.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_betting_lines.Rd | 156 cfbfastR-3.0.0/cfbfastR/man/cfbd_calendar.Rd | 83 cfbfastR-3.0.0/cfbfastR/man/cfbd_coaches.Rd | 156 cfbfastR-3.0.0/cfbfastR/man/cfbd_coaches_profile.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_coaches_seasons.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_coaches_tenures.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_conference_affiliations.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_conference_changes.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_conferences.Rd | 95 cfbfastR-3.0.0/cfbfastR/man/cfbd_draft.Rd | 8 cfbfastR-3.0.0/cfbfastR/man/cfbd_draft_picks.Rd | 147 cfbfastR-3.0.0/cfbfastR/man/cfbd_draft_positions.Rd | 64 cfbfastR-3.0.0/cfbfastR/man/cfbd_draft_teams.Rd | 68 cfbfastR-3.0.0/cfbfastR/man/cfbd_drives.Rd | 196 cfbfastR-3.0.0/cfbfastR/man/cfbd_game_box_advanced.Rd | 226 cfbfastR-3.0.0/cfbfastR/man/cfbd_game_info.Rd | 209 cfbfastR-3.0.0/cfbfastR/man/cfbd_game_media.Rd | 147 cfbfastR-3.0.0/cfbfastR/man/cfbd_game_player_stats.Rd | 256 cfbfastR-3.0.0/cfbfastR/man/cfbd_game_records.Rd | 163 cfbfastR-3.0.0/cfbfastR/man/cfbd_game_team_stats.Rd | 293 cfbfastR-3.0.0/cfbfastR/man/cfbd_game_weather.Rd | 148 cfbfastR-3.0.0/cfbfastR/man/cfbd_games.Rd | 162 cfbfastR-3.0.0/cfbfastR/man/cfbd_info.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_info_usage.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_live_plays.Rd | 265 cfbfastR-3.0.0/cfbfastR/man/cfbd_live_scoreboard.Rd | 166 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics.Rd | 178 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_fg_ep.Rd | 84 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_ppa_games.Rd | 164 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_ppa_players_games.Rd | 165 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_ppa_players_season.Rd | 195 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_ppa_predicted.Rd | 94 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_ppa_teams.Rd | 156 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_wepa_players_kicking.Rd | 121 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_wepa_players_passing.Rd | 145 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_wepa_players_rushing.Rd | 145 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_wepa_team_season.Rd | 153 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_wp.Rd | 120 cfbfastR-3.0.0/cfbfastR/man/cfbd_metrics_wp_pregame.Rd | 127 cfbfastR-3.0.0/cfbfastR/man/cfbd_pbp.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_pbp_data.Rd | 861 + cfbfastR-3.0.0/cfbfastR/man/cfbd_pbp_data_v2.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_pbp_v2.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_play.Rd | 14 cfbfastR-3.0.0/cfbfastR/man/cfbd_play_stats_player.Rd | 255 cfbfastR-3.0.0/cfbfastR/man/cfbd_play_stats_types.Rd | 67 cfbfastR-3.0.0/cfbfastR/man/cfbd_play_types.Rd | 67 cfbfastR-3.0.0/cfbfastR/man/cfbd_player_info.Rd | 117 cfbfastR-3.0.0/cfbfastR/man/cfbd_player_returning.Rd | 117 cfbfastR-3.0.0/cfbfastR/man/cfbd_player_season_overview.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_player_usage.Rd | 147 cfbfastR-3.0.0/cfbfastR/man/cfbd_players.Rd | 15 cfbfastR-3.0.0/cfbfastR/man/cfbd_playoffs.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_playoffs_cfp.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_playoffs_cfp_games.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_playoffs_cfp_participants.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_plays.Rd | 192 cfbfastR-3.0.0/cfbfastR/man/cfbd_rankings.Rd | 125 cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings.Rd | 166 cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings_core.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings_elo.Rd | 115 cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings_fpi.Rd | 117 cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings_sp.Rd | 141 cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings_sp_conference.Rd | 143 cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings_srs.Rd | 99 cfbfastR-3.0.0/cfbfastR/man/cfbd_ratings_srs_expanded.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_recruiting.Rd | 10 cfbfastR-3.0.0/cfbfastR/man/cfbd_recruiting_player.Rd | 156 cfbfastR-3.0.0/cfbfastR/man/cfbd_recruiting_position.Rd | 117 cfbfastR-3.0.0/cfbfastR/man/cfbd_recruiting_team.Rd | 91 cfbfastR-3.0.0/cfbfastR/man/cfbd_recruiting_transfer_portal.Rd | 85 cfbfastR-3.0.0/cfbfastR/man/cfbd_stats.Rd | 26 cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_categories.Rd | 65 cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_game_advanced.Rd | 238 cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_game_havoc.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_player_success.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_player_success_game.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_season_advanced.Rd | 267 cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_season_player.Rd | 252 cfbfastR-3.0.0/cfbfastR/man/cfbd_stats_season_team.Rd | 213 cfbfastR-3.0.0/cfbfastR/man/cfbd_team_info.Rd | 153 cfbfastR-3.0.0/cfbfastR/man/cfbd_team_matchup.Rd | 116 cfbfastR-3.0.0/cfbfastR/man/cfbd_team_matchup_records.Rd | 102 cfbfastR-3.0.0/cfbfastR/man/cfbd_team_roster.Rd | 109 cfbfastR-3.0.0/cfbfastR/man/cfbd_team_talent.Rd | 81 cfbfastR-3.0.0/cfbfastR/man/cfbd_teams.Rd | 19 cfbfastR-3.0.0/cfbfastR/man/cfbd_teams_fbs.Rd |only cfbfastR-3.0.0/cfbfastR/man/cfbd_venues.Rd | 99 cfbfastR-3.0.0/cfbfastR/man/cfbfastR-package.Rd | 109 cfbfastR-3.0.0/cfbfastR/man/data.Rd | 38 cfbfastR-3.0.0/cfbfastR/man/espn_cfb_award.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_awards.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_calendar.Rd | 23 cfbfastR-3.0.0/cfbfastR/man/espn_cfb_catalog.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_clear_cache.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_coach.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_coach_record.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_coaches.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_franchise.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_franchises.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_futures.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_broadcasts.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_drive_plays.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_drives.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_leaders.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_odds.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_pbp.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_play.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_player_box.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_player_statistics.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_powerindex.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_predictor.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_probabilities.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_situation.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_status.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_team_leaders.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_team_linescores.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_team_records.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_team_roster.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_team_statistics.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_game_teams.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_groups.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_pbp.Rd | 16 cfbfastR-3.0.0/cfbfastR/man/espn_cfb_pbp_v2.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_career_stats.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_eventlog.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_gamelog.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_overview.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_seasons.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_splits.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_stats.Rd | 751 - cfbfastR-3.0.0/cfbfastR/man/espn_cfb_player_stats_v3.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_players.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_position.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_positions.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_powerindex.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_qbr.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_rankings.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_recruits.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_scoreboard.Rd | 306 cfbfastR-3.0.0/cfbfastR/man/espn_cfb_season.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_season_info.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_season_types.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_season_weeks.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_seasons.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_standings.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_ats.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_awards.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_coaches.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_events.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_leaders.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_powerindex.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_ranks.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_record.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_roster.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_schedule.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_team_stats.Rd | 5 cfbfastR-3.0.0/cfbfastR/man/espn_cfb_teams.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_unnest_plays.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_venue.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_venues.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_cfb_week_rankings.Rd |only cfbfastR-3.0.0/cfbfastR/man/espn_metrics.Rd | 80 cfbfastR-3.0.0/cfbfastR/man/espn_ratings_fpi.Rd | 45 cfbfastR-3.0.0/cfbfastR/man/fox_cfb_boxscore.Rd |only cfbfastR-3.0.0/cfbfastR/man/fox_cfb_league_leaders.Rd |only cfbfastR-3.0.0/cfbfastR/man/fox_cfb_odds.Rd |only cfbfastR-3.0.0/cfbfastR/man/fox_cfb_pbp.Rd |only cfbfastR-3.0.0/cfbfastR/man/fox_cfb_standings.Rd |only cfbfastR-3.0.0/cfbfastR/man/fox_cfb_team_gamelog.Rd |only cfbfastR-3.0.0/cfbfastR/man/fox_cfb_team_roster.Rd |only cfbfastR-3.0.0/cfbfastR/man/fox_cfb_team_stats.Rd |only cfbfastR-3.0.0/cfbfastR/man/helpers_pbp.Rd | 807 - cfbfastR-3.0.0/cfbfastR/man/load_cfb_fpi_weekly.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_pbp.Rd | 95 cfbfastR-3.0.0/cfbfastR/man/load_cfb_ratings.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_ratings_weekly.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_recruiting_proj.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_recruits.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_returning_production.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_rosters.Rd | 74 cfbfastR-3.0.0/cfbfastR/man/load_cfb_rosters_crosswalk.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_schedule_crosswalk.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_schedules.Rd | 72 cfbfastR-3.0.0/cfbfastR/man/load_cfb_team_summaries_weekly.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_team_talent.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_cfb_teams.Rd | 72 cfbfastR-3.0.0/cfbfastR/man/load_cfb_teams_crosswalk.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_defensive.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_defensive_players.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_drives.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_passing.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_receiving.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_rushing.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_situational.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_specialists.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_team.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_team_gamelog.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_adv_turnover.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_betting.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_drives.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_game_rosters.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_linescores.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_model_pbp.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_passing.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_pbp.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_percentiles.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_play_participants.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_player_box.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_power_index.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_receiving.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_rushing.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_schedules.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_team_box.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_espn_cfb_team_summaries.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_drives.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_linescore.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_officials.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_pbp.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_pbp_cfbfastr.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_player_stats.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_rosters.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_schedule.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_team_stats.Rd |only cfbfastR-3.0.0/cfbfastR/man/load_ncaa_mfb_teams.Rd |only cfbfastR-3.0.0/cfbfastR/man/parquet_from_url.Rd |only cfbfastR-3.0.0/cfbfastR/man/register_cfbd.Rd | 104 cfbfastR-3.0.0/cfbfastR/man/update_cfb_db.Rd | 142 cfbfastR-3.0.0/cfbfastR/man/yahoo_cfb_boxscore.Rd |only cfbfastR-3.0.0/cfbfastR/man/yahoo_cfb_player_season_stats.Rd |only cfbfastR-3.0.0/cfbfastR/man/yahoo_cfb_player_season_stats_legacy.Rd |only cfbfastR-3.0.0/cfbfastR/man/yahoo_cfb_scoreboard.Rd |only cfbfastR-3.0.0/cfbfastR/man/yahoo_cfb_team_season_stats.Rd |only cfbfastR-3.0.0/cfbfastR/man/yahoo_cfb_team_season_stats_legacy.Rd |only cfbfastR-3.0.0/cfbfastR/tests/testthat/fixtures |only cfbfastR-3.0.0/cfbfastR/tests/testthat/setup-cfbd-throttle.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_betting_ats.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_betting_lines.R | 74 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_calendar.R | 29 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_coaches.R | 32 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_coaches_profile.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_coaches_seasons.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_coaches_tenures.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_conference_affiliations.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_conference_changes.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_conferences.R | 30 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_coverage.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_draft_picks.R | 48 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_draft_positions.R | 27 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_draft_teams.R | 27 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_drives.R | 48 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_game_box_advanced.R | 72 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_game_info.R | 101 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_game_media.R | 44 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_game_player_stats.R | 165 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_game_records.R | 54 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_game_team_stats.R | 119 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_game_weather.R | 80 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_info_usage.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_live_plays.R | 234 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_live_scoreboard.R | 121 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_fg_ep.R | 17 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_ppa_games.R | 44 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_ppa_players_games.R | 40 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_ppa_players_season.R | 50 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_ppa_predicted.R | 32 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_wepa_players_kicking.R | 50 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_wepa_players_passing.R | 52 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_wepa_players_rushing.R | 52 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_wepa_team_season.R | 88 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_wp.R | 42 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_metrics_wp_pregame.R | 40 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_pbp_data.R | 136 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_play_stats_player.R | 176 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_play_stats_types.R | 27 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_play_types.R | 27 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_player_info.R | 57 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_player_returning.R | 33 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_player_season_overview.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_player_usage.R | 31 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_playoffs_cfp.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_playoffs_cfp_games.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_playoffs_cfp_participants.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_rankings.R | 78 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_ratings_core.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_ratings_elo.R | 43 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_ratings_fpi.R | 73 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_ratings_sp.R | 65 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_ratings_sp_conf.R | 63 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_ratings_srs.R | 45 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_ratings_srs_expanded.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_recruiting_player.R | 57 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_recruiting_position.R | 51 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_recruiting_team.R | 43 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_recruiting_transfer_portal.R | 29 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_categories.R | 27 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_game_advanced.R | 93 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_game_havoc.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_player_success.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_player_success_game.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_season_advanced.R | 115 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_season_player.R | 79 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_stats_season_team.R | 81 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_team_info.R | 42 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_team_matchup_records.R | 34 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_team_roster.R | 53 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_team_talent.R | 27 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_teams_fbs.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-cfbd_venues.R | 33 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_award.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_awards.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_calendar.R | 61 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_clear_cache.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_coach.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_coach_record.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_coaches.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_franchise.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_franchises.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_futures.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_broadcasts.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_drive_plays.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_drives.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_leaders.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_odds.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_pbp.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_play.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_player_box.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_player_statistics.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_powerindex.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_predictor.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_probabilities.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_situation.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_status.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_team_leaders.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_team_linescores.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_team_records.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_team_roster.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_team_statistics.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_game_teams.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_groups.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_pbp_v2.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player_career_stats.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player_eventlog.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player_gamelog.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player_overview.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player_seasons.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player_splits.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_player_stats.R | 728 - cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_players.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_position.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_positions.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_powerindex.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_qbr.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_rankings.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_recruits.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_schedule.R | 137 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_scoreboard.R | 137 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_season_info.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_season_types.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_season_weeks.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_seasons.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_standings.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_ats.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_awards.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_coaches.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_events.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_leaders.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_powerindex.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_ranks.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_record.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_roster.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_schedule.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_team_stats.R | 718 - cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_teams.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_unnest_plays.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_venue.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_venues.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_cfb_week_rankings.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_http_headers.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_metrics_wp.R | 26 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-espn_ratings_fpi.R | 74 cfbfastR-3.0.0/cfbfastR/tests/testthat/test-fox_cfb.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-load_datasets.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-min_year_df.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-parity_air_yards.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-parity_attribution.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-parity_join_participants.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-parity_penalty_enforcement.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-parity_player_ids.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-pbp_boxscore_parity.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-pbp_engine_switch.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-pbp_equivalence.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-pbp_output_schema.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-pbp_sidecar.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-pbp_taxonomy.R |only cfbfastR-3.0.0/cfbfastR/tests/testthat/test-yahoo_cfb.R |only 480 files changed, 25843 insertions(+), 22115 deletions(-)
Title: Bayesian Ammi Model for Continuous Data with or without Additive
and Dominance Effect
Description: Flexible multi-environment trials analysis via MCMC method for Additive Main Effects and Multiplicative Interaction Model (AMMI) for continuous data.
Biplot with the averages and regions of confidence can be generated. The chains run in parallel on Linux systems and run serially on Windows.
Author: Fabio M. Correa [aut, cre] ,
Luciano A. Oliveira [aut],
Carlos P. Silva [aut],
Cristian T. E. Mendes [aut],
Alessandra Q. Silva [aut],
Joel J. Nuvunga [aut],
Larissa C. V. Boas [aut],
Marcio Balestre [ths],
Diogenes F. Filho [ths],
Julio S. S. Bueno- [...truncated...]
Maintainer: Fabio M. Correa <fmcron@protonmail.com>
Diff between ammiBayes versions 2.1-1 dated 2026-03-02 and 2.2-0 dated 2026-08-24
ChangeLog | 6 ++++++ DESCRIPTION | 13 ++++++++----- MD5 | 11 +++++++---- NAMESPACE | 7 +++++-- R/sm_index.R |only build/vignette.rds |binary man/ammiBayes.sm.plot.Rd |only man/sm.index.Rd |only 8 files changed, 26 insertions(+), 11 deletions(-)
Title: Small Area Estimation Hierarchical Bayes for Spatial Beta Model
Description: Provides several functions and datasets for area-level Small Area Estimation using the Hierarchical Bayesian (HB) method. Model-based estimators are designed for variables of interest that follow a Beta distribution (proportions bounded between 0 and 1). The package supports both non-spatial models and spatial models based on the Simultaneous Autoregressive (SAR) and Leroux Conditional Autoregressive (CAR) structures, with optional survey design effect (DEFF) adjustments. In addition, it provides utility functions for constructing spatial weights matrices and performing spatial autocorrelation diagnostics. The 'rjags' package is used to obtain posterior estimates via Markov Chain Monte Carlo (MCMC). For references, see Rao and Molina (2015) <doi:10.1002/9781118735855>, Liu (2009) <https://api.drum.lib.umd.edu/server/api/core/bitstreams/cb8e2cbf-441e-4f0f-b4b3-6182f3cf24de/content>, Liu et al. (2014) <https://www150.statcan.gc.ca/n1/pub/12-001-x/2014001/article/14030-eng. [...truncated...]
Author: Boby Iwan [aut, cre],
Cucu Sumarni [aut]
Maintainer: Boby Iwan <bobyiwanboby2122@gmail.com>
Diff between saeHB.Spatial.Beta versions 0.1.0 dated 2026-07-01 and 0.1.1 dated 2026-08-24
DESCRIPTION | 8 MD5 | 94 +++++----- R/adjacency_mat.R | 2 R/beta_lerouxcar.R | 80 ++++++--- R/beta_nonspatial.R | 40 +++- R/beta_sar.R | 98 ++++++++--- R/betadeff_lerouxcar.R | 91 +++++++--- R/betadeff_nonspatial.R | 53 ++++-- R/betadeff_sar.R | 109 +++++++++--- R/build_w.R | 171 +++++++++++++------ R/databeta.R | 2 R/databeta_na.R | 2 R/moran_test.R | 77 +++++--- R/saeHB.Spatial.Beta_package.R | 23 +- R/weight_mat.R | 2 README.md | 260 ++++++++++++++++-------------- data/adjacency_mat.rda |binary data/databeta.rda |binary data/databeta_na.rda |binary data/weight_mat.rda |binary inst/doc/saeHB_Spatial_Beta.R | 35 +++- inst/doc/saeHB_Spatial_Beta.Rmd | 84 ++++++++- inst/doc/saeHB_Spatial_Beta.html | 191 ++++++++++++++++++---- man/adjacency_mat.Rd | 2 man/beta_lerouxcar.Rd | 15 - man/beta_nonspatial.Rd | 15 - man/beta_sar.Rd | 15 - man/betadeff_lerouxcar.Rd | 19 +- man/betadeff_nonspatial.Rd | 19 +- man/betadeff_sar.Rd | 19 +- man/build_w.Rd | 100 +++++++---- man/databeta.Rd | 2 man/databeta_na.Rd | 2 man/figures/README-example-1.png |binary man/figures/README-example-2.png |binary man/figures/README-example-3.png |binary man/moran_test.Rd | 53 +++--- man/saeHB.Spatial.Beta-package.Rd | 23 +- man/weight_mat.Rd | 2 tests/testthat/test-beta_lerouxcar.R | 46 ++++- tests/testthat/test-beta_nonspatial.R | 22 +- tests/testthat/test-beta_sar.R | 47 ++++- tests/testthat/test-betadeff_lerouxcar.R | 41 +++- tests/testthat/test-betadeff_nonspatial.R | 24 ++ tests/testthat/test-betadeff_sar.R | 46 ++++- tests/testthat/test-build_w.R | 47 ++++- tests/testthat/test-moran_test.R | 26 ++- vignettes/saeHB_Spatial_Beta.Rmd | 84 ++++++++- 48 files changed, 1462 insertions(+), 629 deletions(-)
More information about saeHB.Spatial.Beta at CRAN
Permanent link
Title: 'shiny' Application for Population Structure and Ancestry
Assessments
Description: Provides a 'shiny' web application developed by the Breeding Insight team
to support pedigree validation and ancestry assessment of plant and animal
populations. The app integrates Mendelian error analysis, parentage assignment
and genetic composition/ancestry methods to help researchers evaluate genomic
relationships through an accessible, web-based interface without requiring
command-line tools. Pedigree validation, Mendelian error analysis and
parentage assignment build on the 'BIGpopA' package
(<https://CRAN.R-project.org/package=BIGpopA>) and support diploid and
polyploid data. Ancestry estimation uses
the sparse non-negative matrix
factorization method of Frichot et al. (2014) <doi:10.1534/genetics.113.160572>
as implemented in the 'LEA' package by Frichot and Francois (2015)
<doi:10.1111/2041-210X.12382>. Line and breed composition are
estimated using the breed composition regression method of Funkhouser
et al. (2017) <doi:10.2527/tas2016.0003>, extended [...truncated...]
Author: Josue Chinchilla-Vargas [aut, cre],
Alexander M. Sandercock [aut],
Breeding Insight Team [aut]
Maintainer: Josue Chinchilla-Vargas <josue.chinchilla@ufl.edu>
Diff between Familia versions 1.0.3 dated 2026-07-29 and 2.0.0 dated 2026-08-24
DESCRIPTION | 21 +++++----- MD5 | 19 ++++----- NAMESPACE | 100 ++++++++++++++++++++++++++++-------------------- NEWS.md | 17 ++++++++ R/help_find_parentage.R | 25 ++++++++++-- R/help_validate_ped.R | 27 +++++++++++- R/mod_Home.R | 2 R/mod_find_parentage.R | 5 +- R/mod_validate_ped.R | 7 ++- README.md | 20 +++++++-- inst/CITATION |only 11 files changed, 170 insertions(+), 73 deletions(-)
Title: Tools to Analyze the Thermal Reaction Norm of Embryo Growth
Description: Tools to analyze the embryo growth and the sexualisation thermal reaction norms. See <doi:10.7717/peerj.8451> for tsd functions; see <doi:10.1016/j.jtherbio.2014.08.005> for thermal reaction norm of embryo growth.
Author: Marc Girondot [aut, cre]
Maintainer: Marc Girondot <marc.girondot@gmail.com>
Diff between embryogrowth versions 2025.12.22 dated 2025-12-22 and 2026.8.24 dated 2026-08-24
DESCRIPTION | 10 - MD5 | 202 +++++++++++++++++----------------- NEWS | 25 +++- R/ChangeSSM.R | 14 +- R/Exponential.R | 2 R/GRTRN_MHmcmc.R | 11 + R/Gompertz.R | 2 R/HatchingSuccess.predict.R | 2 R/Linear.R | 2 R/MovingIncubation.R | 4 R/P_TRT.R | 40 ++++++ R/SSM.R | 28 ++-- R/STRN.R | 42 ++++--- R/STRN_MHmcmc.R | 2 R/STRN_fit.R | 89 +++++++++------ R/TRN_MHmcmc_p.R | 2 R/embryogrowth-package.R | 8 - R/hist.Nests.R | 4 R/info.nests.R | 40 ++++-- R/integral.Gompertz.R | 2 R/integral.exponential.R | 2 R/integral.linear.R | 2 R/likelihoodR.R | 4 R/modelTSD.R | 31 +++++ R/plot.NestsResult.R | 2 R/plot.tsd.R | 2 R/plotR.R | 1 R/resultNest_3p_Dallwitz.R | 2 R/resultNest_3p_Weibull.R | 2 R/resultNest_4p_SSM.R | 2 R/resultNest_4p_normal.R | 2 R/resultNest_4p_trigo.R | 2 R/resultNest_4p_weight.R | 2 R/resultNest_5p_Dallwitz.R | 2 R/resultNest_6p_SSM.R | 2 R/resultNest_mcmc_4p_SSM.R | 2 R/resultNest_mcmc_6p_SSM.R | 2 R/searchR.R | 81 ++++++++----- R/stages.R | 8 - R/tempConst.R | 2 R/tsd.R | 234 ++++++++++++++++++++++++++-------------- R/tsd_MHmcmc_p.R | 10 + R/weightmaxentropy.R | 2 build/partial.rdb |binary data/DatabaseNestingArea.rda |binary data/DatabaseTSD.rda |binary data/ROSIE.rda |binary data/TSP.list.rda |binary data/stages.rda |binary man/ChangeSSM.Rd | 6 - man/DatabaseTSD.Rd | 18 +-- man/DatabaseTSD.version.Rd | 16 +- man/GRTRN_MHmcmc.Rd | 5 man/HatchingSuccess.MHmcmc.Rd | 16 +- man/HatchingSuccess.MHmcmc_p.Rd | 16 +- man/HatchingSuccess.fit.Rd | 16 +- man/HatchingSuccess.lnL.Rd | 16 +- man/HatchingSuccess.model.Rd | 16 +- man/MovingIncubation.Rd | 2 man/P_TRT.Rd | 16 +- man/ROSIE.Rd | 18 +-- man/ROSIE.version.Rd | 16 +- man/STRN.Rd | 6 + man/STRN_MHmcmc.Rd | 2 man/TRN_MHmcmc_p.Rd | 2 man/TSP.list.Rd | 18 +-- man/calibrate.datalogger.Rd | 6 - man/dydt.Gompertz.Rd | 2 man/dydt.exponential.Rd | 2 man/dydt.linear.Rd | 2 man/embryogrowth-package.Rd | 8 - man/figures/E.png |binary man/info.nests.Rd | 2 man/integral.Gompertz.Rd | 2 man/integral.exponential.Rd | 2 man/integral.linear.Rd | 2 man/likelihoodR.Rd | 2 man/logLik.HatchingSuccess.Rd | 16 +- man/movement.Rd | 6 - man/nobs.HatchingSuccess.Rd | 16 +- man/plot.NestsResult.Rd | 2 man/plot.tsd.Rd | 18 +-- man/predict.HatchingSuccess.Rd | 16 +- man/predict.tsd.Rd | 16 +- man/resultNest_3p_Dallwitz.Rd | 2 man/resultNest_3p_Weibull.Rd | 2 man/resultNest_4p_SSM.Rd | 2 man/resultNest_4p_normal.Rd | 2 man/resultNest_4p_trigo.Rd | 2 man/resultNest_4p_weight.Rd | 2 man/resultNest_5p_Dallwitz.Rd | 2 man/resultNest_6p_SSM.Rd | 2 man/resultNest_mcmc_4p_SSM.Rd | 2 man/resultNest_mcmc_6p_SSM.Rd | 2 man/searchR.Rd | 26 +++- man/stages.Rd | 26 ++-- man/tempConst.Rd | 2 man/tsd.Rd | 89 +++++++++++++-- man/tsd_MHmcmc.Rd | 16 +- man/tsd_MHmcmc_p.Rd | 16 +- man/uncertainty.datalogger.Rd | 6 - man/weightmaxentropy.Rd | 2 102 files changed, 900 insertions(+), 560 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-12-22 1.4.0
Title: Data Sources for 'tmap'
Description: Provides support for a variety of spatial data sources in 'tmap',
including remote, tiled, and streaming formats. Enables the use
of external vector and raster data without requiring full data
import, facilitating efficient visualization workflows.
Author: Martijn Tennekes [aut, cre]
Maintainer: Martijn Tennekes <mtennekes@gmail.com>
Diff between tmap.sources versions 0.1 dated 2026-06-01 and 0.1-1 dated 2026-08-24
DESCRIPTION | 6 +++--- MD5 | 11 ++++++----- NEWS.md |only R/funs_pmtiles2.R | 45 ++++++++++++++++++++++++++++++++++++--------- man/tmap_src_accessors.Rd | 14 ++++++++------ man/tmap_src_meta.Rd | 4 +++- man/tmap_src_overture.Rd | 3 ++- 7 files changed, 58 insertions(+), 25 deletions(-)
Title: Singular Linear Models for Longitudinal Data
Description: Fits singular linear models to longitudinal data. Singular linear
models are useful when the number, or timing, of longitudinal observations
may be informative about the observations themselves. They are described
in Farewell (2010) <doi:10.1093/biomet/asp068>, and are extensions of the
linear increments model <doi:10.1111/j.1467-9876.2007.00590.x> to general
longitudinal data.
Author: Daniel Farewell [aut, cre]
Maintainer: Daniel Farewell <farewelld@cardiff.ac.uk>
Diff between slim versions 0.1.2 dated 2026-08-23 and 0.1.3 dated 2026-08-24
DESCRIPTION | 10 +++++----- MD5 | 20 ++++++++++---------- NAMESPACE | 3 ++- NEWS.md | 4 ++-- R/slim-package.R | 2 +- README.md | 2 +- inst/doc/slim.R | 1 + inst/doc/slim.Rmd | 3 ++- inst/doc/slim.pdf |binary man/slim-package.Rd | 2 +- vignettes/slim.Rmd | 3 ++- 11 files changed, 27 insertions(+), 23 deletions(-)
Title: Fit Models Derived from Point Processes to Species Distributions
using 'inlabru'
Description: Integrated species distribution modeling is a rising field in quantitative ecology thanks to significant rises in the quantity of data available, increases in computational speed and the proven benefits of using such models.
Despite this, the general software to help ecologists construct such models in an easy-to-use framework is lacking.
We therefore introduce the R package 'PointedSDMs': which provides the tools to help ecologists set up integrated models and perform inference on them.
There are also functions within the package to help run spatial cross-validation for model selection, as well as generic plotting and predicting functions.
An introduction to these methods is discussed in Issac, Jarzyna, Keil, Dambly, Boersch-Supan, Browning, Freeman, Golding, Guillera-Arroita, Henrys, Jarvis, Lahoz-Monfort, Pagel, Pescott, Schmucki, Simmonds and O’Hara (2020) <doi:10.1016/j.tree.2019.08.006>.
Author: Philip Mostert [aut, cre],
Bob O'hara [aut]
Maintainer: Philip Mostert <philip.s.mostert@ntnu.no>
Diff between PointedSDMs versions 2.1.5 dated 2026-02-18 and 2.1.6 dated 2026-08-24
DESCRIPTION | 8 MD5 | 54 +- NAMESPACE | 10 R/blockedCV.R | 33 - R/bruSDM_predict.R | 1 R/datasetOut.R | 20 R/fitISDM.R | 12 R/makeLhoods.R | 4 R/modISDM_predict.R | 2 R/modSpecies_predict.R | 31 - R/specifyISDM.R | 43 + R/specifyMarks.R | 8 R/specifySpecies.R | 8 build/vignette.rds |binary inst/doc/Marked_Point_Process.html | 15 inst/doc/Setophaga.Rmd | 8 inst/doc/Setophaga.html | 90 ++-- inst/doc/Spatiotemporal_example.html | 4 man/dataOrganize.Rd | 220 +++++++--- man/makeLhoods.Rd | 5 man/specifyISDM.Rd | 733 ++++++++++++++++----------------- man/specifyMarks.Rd | 727 ++++++++++++++++----------------- man/specifySpecies.Rd | 746 ++++++++++++++++------------------ tests/testthat/testthat_datasetOut.R | 4 tests/testthat/testthat_fitISDM.R | 4 tests/testthat/testthat_makeLhoods.R | 5 tests/testthat/testthat_specifyISDM.R | 10 vignettes/Setophaga.Rmd | 8 28 files changed, 1466 insertions(+), 1347 deletions(-)
Title: Tools to Manage a Parametric Function that Describes Phenology
and More
Description: Functions used to fit and test the phenology of species based on counts. Based on Girondot, M. (2010) <doi:10.3354/esr00292> for the phenology function, Girondot, M. (2017) <doi:10.1016/j.ecolind.2017.05.063> for the convolution of negative binomial, Girondot, M. and Rizzo, A. (2015) <doi:10.2993/etbi-35-02-337-353.1> for Bayesian estimate, Pfaller JB, ..., Girondot M (2019) <doi:10.1007/s00227-019-3545-x> for tag-loss estimate, Hancock J, ..., Girondot M (2019) <doi:10.1016/j.ecolmodel.2019.04.013> for nesting history, Laloe J-O, ..., Girondot M, Hays GC (2020) <doi:10.1007/s00227-020-03686-x> for aggregating several seasons.
Author: Marc Girondot [aut, cre]
Maintainer: Marc Girondot <marc.girondot@gmail.com>
Diff between phenology versions 2026.2.28 dated 2026-02-28 and 2026.8.24 dated 2026-08-24
DESCRIPTION | 10 - MD5 | 220 ++++++++++++++++----------------- NAMESPACE | 2 NEWS | 25 +++ R/CI.RMU.R | 12 + R/ECFOCF_f.R | 2 R/ECFOCF_full.R | 15 +- R/LikelihoodRMU.R | 38 +++-- R/Likelihood_phenology.R | 17 +- R/Sea_Turtles_Bayesian.R |only R/Tagloss_L.R | 30 ++-- R/Tagloss_cumul.R | 2 R/Tagloss_mcmc_p.R | 2 R/Tagloss_model.R | 2 R/Tagloss_simulate.R | 2 R/daily_count.R | 148 +++++++--------------- R/fitCF.R | 52 +++++-- R/fitCF_MHmcmc.R | 18 ++ R/fitRMU.R | 20 ++- R/fitRMU_MHmcmc_p.R | 2 R/fit_phenology.R | 4 R/format_par.R | 275 ++++++++++++++++++++--------------------- R/generateCF.R | 2 R/lnLCF.R | 29 ++-- R/lnRI_norm.R | 4 R/logLik.Tagloss.R | 2 R/map_phenology.R | 36 +++-- R/phenology-package.R | 4 R/phenology_MHmcmc.R | 53 ++++--- R/phenology_MHmcmc_p.R | 72 ++++++++-- R/plot.ECFOCF.R | 292 ++++++++++++++++++++++++++++++++------------ R/plot.phenologydata.R |only man/AutoFitPhenology.Rd | 61 ++++----- man/BE_to_LBLE.Rd | 61 ++++----- man/Bayesian.remigration.Rd | 10 - man/CI.RMU.Rd | 12 - man/ECFOCF_f.Rd | 22 +-- man/ECFOCF_full.Rd | 31 ++-- man/Gratiot.Rd | 63 ++++----- man/IPFit.Rd | 10 - man/IPModel.Rd | 10 - man/IPPredict.Rd | 10 - man/LBLE_to_BE.Rd | 61 ++++----- man/LBLE_to_L.Rd | 61 ++++----- man/L_to_LBLE.Rd | 61 ++++----- man/LnRI_norm.Rd | 10 - man/MarineTurtles_2002.Rd | 63 ++++----- man/MinBMinE_to_Min.Rd | 61 ++++----- man/RI.Rd | 10 - man/RI2BP.Rd | 10 - man/Sea_Turtles_Bayesian.Rd |only man/TableECFOCF.Rd | 22 +-- man/Tagloss_L.Rd | 52 +++---- man/Tagloss_LengthObs.Rd | 26 +-- man/Tagloss_cumul.Rd | 26 +-- man/Tagloss_daymax.Rd | 26 +-- man/Tagloss_fit.Rd | 26 +-- man/Tagloss_format.Rd | 26 +-- man/Tagloss_mcmc.Rd | 26 +-- man/Tagloss_mcmc_p.Rd | 26 +-- man/Tagloss_model.Rd | 26 +-- man/Tagloss_simulate.Rd | 28 ++-- man/adapt_parameters.Rd | 61 ++++----- man/add_SE.Rd | 61 ++++----- man/add_phenology.Rd | 61 ++++----- man/extract_result.Rd | 61 ++++----- man/fitCF.Rd | 30 ++-- man/fitCF_MHmcmc.Rd | 29 ++-- man/fitCF_MHmcmc_p.Rd | 22 +-- man/fitRMU.Rd | 12 - man/fitRMU_MHmcmc.Rd | 12 - man/fitRMU_MHmcmc_p.Rd | 12 - man/fit_phenology.Rd | 61 ++++----- man/generateCF.Rd | 22 +-- man/likelihood_phenology.Rd | 78 ++++++----- man/lnLCF.Rd | 33 +++- man/logLik.ECFOCF.Rd | 22 +-- man/logLik.Tagloss.Rd | 28 ++-- man/logLik.fitRMU.Rd | 12 - man/logLik.phenology.Rd | 61 ++++----- man/map_Gratiot.Rd | 63 ++++----- man/map_phenology.Rd | 76 ++++++----- man/o_4p_p1p2.Rd | 28 ++-- man/par_init.Rd | 61 ++++----- man/phenology-package.Rd | 4 man/phenology.Rd | 61 ++++----- man/phenology2fitRMU.Rd | 61 ++++----- man/phenology_MHmcmc.Rd | 62 ++++----- man/phenology_MHmcmc_p.Rd | 61 ++++----- man/plot.ECFOCF.Rd | 36 +++-- man/plot.IP.Rd | 10 - man/plot.Remigration.Rd | 10 - man/plot.TableECFOCF.Rd | 22 +-- man/plot.Tagloss.Rd | 26 +-- man/plot.TaglossData.Rd | 26 +-- man/plot.fitRMU.Rd | 12 - man/plot.phenology.Rd | 61 ++++----- man/plot.phenologydata.Rd |only man/plot.phenologymap.Rd | 61 ++++----- man/plot_delta.Rd | 61 ++++----- man/plot_phi.Rd | 61 ++++----- man/print.phenology.Rd | 61 ++++----- man/print.phenologymap.Rd | 61 ++++----- man/print.phenologyout.Rd | 61 ++++----- man/remove_site.Rd | 61 ++++----- man/result_Gratiot.Rd | 63 ++++----- man/result_Gratiot1.Rd | 63 ++++----- man/result_Gratiot2.Rd | 63 ++++----- man/result_Gratiot_Flat.Rd | 63 ++++----- man/summary.IP.Rd | 10 - man/summary.phenology.Rd | 61 ++++----- man/summary.phenologymap.Rd | 61 ++++----- man/summary.phenologyout.Rd | 61 ++++----- 113 files changed, 2444 insertions(+), 2115 deletions(-)
Title: Toolkit for Analysis of Genomic Data
Description: A toolkit for analysis of genomic data. The 'misha' package
implements an efficient data structure for storing genomic data, and
provides a set of functions for data extraction, manipulation and
analysis. Some of the 2D genome algorithms were described in Yaffe and Tanay
(2011) <doi:10.1038/ng.947>.
Author: Misha Hoichman [aut],
Aviezer Lifshitz [aut, cre],
Eitan Yaffe [aut],
Amos Tanay [aut],
Weizmann Institute of Science [cph]
Maintainer: Aviezer Lifshitz <aviezer.lifshitz@weizmann.ac.il>
Diff between misha versions 5.6.6 dated 2026-03-19 and 5.11.23 dated 2026-08-24
DESCRIPTION | 14 MD5 | 693 +++-- NAMESPACE | 26 NEWS.md | 424 +++ R/compute-analysis.R | 1 R/compute-bins.R | 25 R/compute-core.R | 75 R/compute-distribution.R | 11 R/compute-sequence.R | 29 R/compute-utils.R | 9 R/config-defaults.R | 12 R/dataset.R | 197 + R/db-attrs.R | 13 R/db-cache.R | 101 R/db-core.R | 443 +++ R/db-create.R | 68 R/db-dir.R | 8 R/db-index.R | 582 +++- R/db-invalidate-cache.R |only R/db-management.R | 9 R/db-root.R | 153 + R/db-trash.R |only R/doc-nan.R |only R/genome-build-binaries.R |only R/genome-build-chromalias.R |only R/genome-build-fetchers.R |only R/genome-build-installers.R |only R/genome-build-rmsk-parser.R |only R/genome-build-seq.R |only R/genome-build.R |only R/genome-edit.R |only R/gmultitasking-strategy.R |only R/intervals-annotation.R | 17 R/intervals-attr.R | 29 R/intervals-bigset.R | 22 R/intervals-core.R | 116 R/intervals-import.R |only R/intervals-liftover.R | 81 R/intervals-load-save.R | 134 - R/intervals-management.R | 26 R/intervals-operations.R | 214 + R/intervals-to-mat.R |only R/intervals-tracks.R | 6 R/misha-package.R | 15 R/neighbors.R | 11 R/pssm_utils.R | 60 R/sequence.R | 250 ++ R/synth.R | 1170 +++++++++- R/track-2d.R | 109 R/track-array.R | 48 R/track-attr.R | 8 R/track-convert.R | 55 R/track-create-atomic.R |only R/track-create.R | 187 + R/track-export.R | 21 R/track-import.R | 312 +- R/track-liftover.R | 61 R/track-management.R | 518 +++- R/track-modify.R | 88 R/track-var.R | 22 R/utils-memory.R | 11 R/utils.R | 139 + R/vtrack.R | 642 +++++ R/zzz.R | 41 README.md | 74 inst/WORDLIST | 139 + inst/doc/Database-Formats.R | 201 - inst/doc/Database-Formats.Rmd | 163 - inst/doc/Database-Formats.html | 273 +- inst/doc/Genomes.R | 30 inst/doc/Genomes.Rmd | 65 inst/doc/Genomes.html | 43 inst/doc/Manual.R | 526 ++-- inst/doc/Manual.Rmd | 220 + inst/doc/Manual.html | 455 ++- inst/doc/Misha-Basics.R | 134 - inst/doc/Misha-Basics.Rmd | 40 inst/doc/Misha-Basics.html | 151 + inst/genomes.yaml |only man/dot-gextract_track_parallel.Rd |only man/dot-gmultitasking_strategy.Rd |only man/dot-misha.Rd | 4 man/gbins.quantiles.Rd | 4 man/gbins.summary.Rd | 4 man/gdb.build_genome.Rd |only man/gdb.convert_to_indexed.Rd | 9 man/gdb.genome_info.Rd |only man/gdb.init.Rd | 4 man/gdb.init_examples.Rd |only man/gdb.install_gff3_converter.Rd |only man/gdb.install_gtf_converter.Rd |only man/gdb.install_intervals.Rd |only man/gdb.list_genomes.Rd |only man/gdb.unload.Rd |only man/gdist.Rd | 38 man/gextract.Rd | 50 man/ggenome.implant.Rd |only man/ggenome.transplant.Rd |only man/gintervals.2d.intersect.Rd |only man/gintervals.2d.union.Rd |only man/gintervals.Rd | 13 man/gintervals.from_mat.Rd |only man/gintervals.from_strings.Rd |only man/gintervals.import_bed.Rd |only man/gintervals.import_gff.Rd |only man/gintervals.import_vcf.Rd |only man/gintervals.to_mat.Rd |only man/glookup.Rd | 4 man/gquantiles.Rd | 39 man/gsample.Rd | 4 man/gscreen.Rd | 34 man/gsegment.Rd | 34 man/gseq.extract.Rd | 22 man/gseq.pwm.Rd | 16 man/gseq.pwm_edits.Rd |only man/gseq.read_homer.Rd | 6 man/gseq.read_jaspar.Rd | 6 man/gseq.read_meme.Rd | 6 man/gsummary.Rd | 34 man/gsynth.bin_map.Rd | 3 man/gsynth.cell_merge.Rd |only man/gsynth.forbid_kmer.Rd |only man/gsynth.random.Rd | 7 man/gsynth.sample.Rd | 48 man/gsynth.score.Rd |only man/gsynth.train.Rd | 65 man/gtrack.array.extract.Rd | 2 man/gtrack.copy.Rd | 37 man/gtrack.create_dense.Rd | 21 man/gtrack.create_sparse.Rd | 12 man/gtrack.import.Rd | 11 man/gtrack.import_mappedseq.Rd | 20 man/gtrack.ls.Rd | 23 man/gtrack.modify.Rd | 6 man/gvtrack.clear.Rd |only man/gvtrack.create.Rd | 183 + man/gvtrack.iterator.2d.Rd | 4 man/gvtrack.iterator.Rd | 4 man/misha-NaN.Rd |only man/misha-package.Rd | 15 man/rbind.intervs_mat.Rd |only man/sub-.intervs_mat.Rd |only src/AggregationHelpers.h | 91 src/BinFinder.cpp | 7 src/BufferedFile.cpp | 6 src/BufferedFile.h | 14 src/ChainIntervalConverter.cpp | 6 src/Computer2D.cpp | 19 src/ConfigurationManager.h | 4 src/DataFrameUtils.cpp | 10 src/DnaPSSM.cpp | 481 +--- src/DnaPSSM.h | 26 src/GInterval.cpp | 13 src/GInterval.h | 5 src/GIntervals.cpp | 14 src/GIntervalsBigSet1D.cpp | 21 src/GIntervalsBigSet1D.h | 9 src/GIntervalsBigSet2D.cpp | 113 src/GIntervalsBigSet2D.h | 45 src/GIntervalsMeta1D.cpp | 6 src/GIntervalsMeta1D.h | 1 src/GIntervalsMeta2D.cpp | 171 - src/GIntervalsMeta2D.h | 207 + src/GTrackIntervalsFetcher.cpp | 240 +- src/GTrackIntervalsFetcher1D.h | 4 src/GTrackIntervalsFetcher2D.h | 102 src/GTrackLiftover.cpp | 323 ++ src/GdbInvalidateCaches.cpp |only src/GenomeArraysCsv.cpp | 21 src/GenomeArraysCsv.h | 9 src/GenomeCisDecay.cpp | 51 src/GenomeComputeStrandAutocorr.cpp | 13 src/GenomeCreatePwmEnergy.cpp | 19 src/GenomeEditImplant.cpp |only src/GenomeIndex.cpp | 68 src/GenomeIntervalUtils.cpp | 51 src/GenomeIteratorIntervals.cpp | 2 src/GenomeKmerDist.cpp | 8 src/GenomeSeqFetch.cpp | 5 src/GenomeSeqFetch.h | 8 src/GenomeSeqMultiImport.cpp | 6 src/GenomeSeqRead.cpp | 268 ++ src/GenomeSynthReplace.cpp | 4 src/GenomeSynthSample.cpp | 184 + src/GenomeSynthScore.cpp |only src/GenomeSynthTrain.cpp | 129 - src/GenomeTrack.cpp | 19 src/GenomeTrack.h | 23 src/GenomeTrack1D.h | 6 src/GenomeTrack2D.h | 7 src/GenomeTrackApply.cpp | 24 src/GenomeTrackArrayExtract.cpp | 9 src/GenomeTrackArrayImport.cpp | 6 src/GenomeTrackArrays.cpp | 75 src/GenomeTrackArrays.h | 50 src/GenomeTrackBinnedTransform.cpp | 66 src/GenomeTrackComputed.h | 17 src/GenomeTrackCor.cpp | 62 src/GenomeTrackCreate.cpp | 289 ++ src/GenomeTrackCreateComputer2dTest.cpp | 2 src/GenomeTrackCreateDense.cpp | 67 src/GenomeTrackCreateSparse.cpp | 96 src/GenomeTrackDistribution.cpp | 21 src/GenomeTrackExtract.cpp | 907 ++++++- src/GenomeTrackFindNeighbors.cpp | 6 src/GenomeTrackFixedBin.cpp | 552 +++- src/GenomeTrackFixedBin.h | 87 src/GenomeTrackImportMappedseq.cpp | 175 + src/GenomeTrackImportWig.cpp | 130 + src/GenomeTrackInMemory.cpp | 68 src/GenomeTrackIndexedFormat.cpp | 122 - src/GenomeTrackIndexedWriter.cpp |only src/GenomeTrackIndexedWriter.h |only src/GenomeTrackInfo.cpp | 29 src/GenomeTrackModify.cpp | 175 + src/GenomeTrackPartition.cpp | 15 src/GenomeTrackQuantiles.cpp | 448 +++ src/GenomeTrackScreener.cpp | 72 src/GenomeTrackSmooth.cpp | 31 src/GenomeTrackSparse.cpp | 108 src/GenomeTrackSparse.h | 63 src/GenomeTrackSplitIndexed.cpp |only src/GenomeTrackSummary.cpp | 52 src/GenomeTrackWilcox.cpp | 9 src/GenomeUtilsR.cpp | 22 src/GseqPwmEdits.cpp |only src/GseqString.cpp | 430 +-- src/HashFunc.h | 12 src/HiCComputers.cpp | 5 src/IntervVarProcessor.cpp | 319 -- src/IntervalConverter.cpp | 63 src/IntervalValidator.cpp | 4 src/IntervalsImport.cpp | 2 src/IntervalsIndex1D.cpp | 97 src/IntervalsIndex2D.cpp | 100 src/IntervalsIndexedFormat.cpp | 198 - src/IntervalsLiftover.cpp | 25 src/IntervalsToMat.cpp |only src/Makevars | 2 src/MmapFile.h |only src/PWMEditDistanceScorer.cpp |only src/PWMEditDistanceScorer.h |only src/PWMLseEditDistanceScorer.cpp |only src/PWMLseEditDistanceScorer.h |only src/PssmSet.cpp | 4 src/SegmentFinder.h | 28 src/SequenceVarProcessor.cpp | 380 +++ src/SequenceVarProcessor.h | 14 src/StatQuadTree.h | 73 src/StatQuadTreeCached.h | 13 src/StatQuadTreeCachedSerializer.h | 88 src/StratifiedMarkovModel.cpp | 287 +- src/StratifiedMarkovModel.h | 171 + src/StreamPercentiler.h | 97 src/TGLException.cpp | 2 src/TGLException.h | 23 src/TrackExpressionParams.h | 12 src/TrackExpressionScanner.cpp | 583 ++++ src/TrackExpressionScanner.h | 2 src/TrackExpressionVars.cpp | 545 ++++ src/TrackExpressionVars.h | 97 src/TrackIndex.h | 4 src/TrackIndex2D.cpp | 241 -- src/TrackIndex2D.h | 6 src/TrackIndexWriter.cpp |only src/TrackIndexWriter.h |only src/TrackVarProcessor.cpp | 403 +-- src/TrackVarProcessor.h | 5 src/TrackVars.cpp | 17 src/UnknownChroms.h |only src/Wig.cpp | 48 src/Wig.h | 14 src/misha-init.cpp | 66 src/rdbinterval.cpp | 356 ++- src/rdbinterval.h | 60 src/rdbprogress.cpp | 1 src/rdbutils.cpp | 313 ++ src/rdbutils.h | 336 ++ tests/testthat/fixtures/assembly-report-mini.txt |only tests/testthat/fixtures/chrom-alias-mini.txt |only tests/testthat/fixtures/hub-index.html |only tests/testthat/fixtures/rmsk-mini.out.gz |only tests/testthat/fixtures/tiny-hub-groot |only tests/testthat/helper-bam.R |only tests/testthat/helper-liftover.R | 3 tests/testthat/helper-perf.R |only tests/testthat/helper-pwm.R | 200 + tests/testthat/helper-test_db.R | 356 ++- tests/testthat/setup.R | 14 tests/testthat/test-2d-hic-analysis.R | 5 tests/testthat/test-2d-parity.R | 4 tests/testthat/test-2d-track-padding.R |only tests/testthat/test-audit-2026-06-28-adversarial.R |only tests/testthat/test-audit-2026-06-28-adversarial2.R |only tests/testthat/test-audit-2026-06-28-adversarial3.R |only tests/testthat/test-audit-2026-06-28-lows.R |only tests/testthat/test-audit-2026-06-28-mediums.R |only tests/testthat/test-audit-2026-06-28.R |only tests/testthat/test-auto-config-stress.R | 18 tests/testthat/test-auto-config.R | 9 tests/testthat/test-bedgraph-nonchr-import.R |only tests/testthat/test-bigset-character-chrom.R |only tests/testthat/test-bigset-fast-load.R | 4 tests/testthat/test-bigwigtowig-resolution.R |only tests/testthat/test-character-strand.R |only tests/testthat/test-compute-chrom-aliases.R |only tests/testthat/test-create-dir-override.R |only tests/testthat/test-dataset.R | 106 tests/testthat/test-db-cache-provenance.R |only tests/testthat/test-db-format-conversion.R | 2 tests/testthat/test-db.R | 60 tests/testthat/test-deferred-warnings.R |only tests/testthat/test-gbins.R | 69 tests/testthat/test-gcor.R | 4 tests/testthat/test-gdb-convert-parallel.R |only tests/testthat/test-gdb-unload.R |only tests/testthat/test-gdist.R | 31 tests/testthat/test-genome-build-binary-resolver.R |only tests/testthat/test-genome-build-chromalias.R |only tests/testthat/test-genome-build-hub-listing.R |only tests/testthat/test-genome-build-hub-preflight.R |only tests/testthat/test-genome-build-install-intervals.R |only tests/testthat/test-genome-build-installers.R |only tests/testthat/test-genome-build-integration-hub.R |only tests/testthat/test-genome-build-integration-zoonomia-smoke.R |only tests/testthat/test-genome-build-ncbi-helpers.R |only tests/testthat/test-genome-build-ncbi-preflight.R |only tests/testthat/test-genome-build-recipe.R |only tests/testthat/test-genome-build-resolve.R |only tests/testthat/test-genome-build-rmsk-out.R |only tests/testthat/test-genome-build.R |only tests/testthat/test-gextract-direct-to-r.R |only tests/testthat/test-gextract-intervals-join.R |only tests/testthat/test-gextract-single-chrom-multitask.R | 7 tests/testthat/test-ggenome.R |only tests/testthat/test-gintervals-2d-meta-sparse.R |only tests/testthat/test-gintervals-2d-setops.R |only tests/testthat/test-gintervals-from-strings.R |only tests/testthat/test-gintervals-to-mat.R |only tests/testthat/test-gintervals.liftover-agg.R | 91 tests/testthat/test-gintervals1.R | 30 tests/testthat/test-gmultitasking-strategy.R |only tests/testthat/test-gpartition.R | 32 tests/testthat/test-gquantiles.R | 118 + tests/testthat/test-gseq-extract-parallel.R |only tests/testthat/test-gseq-pwm-edits-below.R |only tests/testthat/test-gseq-pwm-edits.R |only tests/testthat/test-gseq_pwm-parallel.R | 112 tests/testthat/test-gsynth-alignment.R |only tests/testthat/test-gsynth-forbid.R |only tests/testthat/test-gsynth-gsm.R | 5 tests/testthat/test-gsynth-k.R |only tests/testthat/test-gsynth-parallel-helper.R | 5 tests/testthat/test-gsynth-prior.R |only tests/testthat/test-gsynth-sample-preserve-n.R |only tests/testthat/test-gsynth-score.R |only tests/testthat/test-gsynth.R | 438 +++ tests/testthat/test-gtrack-create-meta-indexed.R |only tests/testthat/test-gtrack.array.R | 7 tests/testthat/test-gtrack.create_dense.R | 238 ++ tests/testthat/test-gtrack.create_sparse-value-alignment.R |only tests/testthat/test-gtrack.import-bam.R |only tests/testthat/test-gtrack.import-chrom-mismatch.R |only tests/testthat/test-gtrack.import2.R | 7 tests/testthat/test-gtrack.import5.R | 25 tests/testthat/test-gtrack.liftover-agg.R | 284 ++ tests/testthat/test-gvtrack-clear.R |only tests/testthat/test-gvtrack.filter.R | 11 tests/testthat/test-gzip-interval-import.R |only tests/testthat/test-index-cache-invalidation.R |only tests/testthat/test-indexed-empty-leading-chrom.R |only tests/testthat/test-indexed-empty-nonleading-chrom.R |only tests/testthat/test-indexed-integration.R | 74 tests/testthat/test-input-format-ergonomics.R |only tests/testthat/test-interrupt-handling.R |only tests/testthat/test-issue-149-quantiles-truncation.R |only tests/testthat/test-iterator-overlaps.R |only tests/testthat/test-kmer.R | 2 tests/testthat/test-lifetime-counters.R |only tests/testthat/test-liftover-hg19-hg38.R | 29 tests/testthat/test-liftover-kent-differential.R |only tests/testthat/test-liftover-overlap-reach.R |only tests/testthat/test-liftover.R | 23 tests/testthat/test-motifs.R | 45 tests/testthat/test-multi-db.R | 5 tests/testthat/test-multicontig-2d-scope.R |only tests/testthat/test-multifasta-import.R | 2 tests/testthat/test-multitask-shm-fallback.R |only tests/testthat/test-na-string-columns.R |only tests/testthat/test-ondisk-safety.R |only tests/testthat/test-perchrom-empty-leading-chrom.R |only tests/testthat/test-perf-regression.R |only tests/testthat/test-permissions-umask.R |only tests/testthat/test-protect-stack-growth.R |only tests/testthat/test-pwm-count-spatial-bidirect.R | 11 tests/testthat/test-pwm-count.R | 202 + tests/testthat/test-pwm-edit-distance-adversarial.R |only tests/testthat/test-pwm-edit-distance-below-n-skip.R |only tests/testthat/test-pwm-edit-distance-below.R |only tests/testthat/test-pwm-edit-distance.R |only tests/testthat/test-pwm-indexed-gtrack-create.R | 4 tests/testthat/test-pwm-n-mutations.R |only tests/testthat/test-pwm-prefilter-adversarial.R |only tests/testthat/test-pwm-sliding-window.R | 48 tests/testthat/test-pwm.R | 17 tests/testthat/test-sequence.R | 153 + tests/testthat/test-single-shard-multitasking.R |only tests/testthat/test-synth-chromid.R |only tests/testthat/test-track-atomic-create.R |only tests/testthat/test-track-copy-crossdb.R |only tests/testthat/test-track-export.R | 4 tests/testthat/test-track-indexed-direct.R |only tests/testthat/test-track-rm-fast.R |only tests/testthat/test-track-trash.R |only tests/testthat/test-track.attrs.R | 39 tests/testthat/test-vignette-regressions.R |only tests/testthat/test-vignettes-knit.R |only tests/testthat/test-vtrack-distance-nearest-trap.R |only tests/testthat/test-vtrack-params-validation.R |only tests/testthat/test-vtrack-shift-out-of-range.R |only tests/testthat/test-vtrack-values.R | 15 vignettes/Database-Formats.Rmd | 163 - vignettes/Genomes.Rmd | 65 vignettes/Manual.Rmd | 220 + vignettes/Misha-Basics.Rmd | 40 425 files changed, 20631 insertions(+), 5677 deletions(-)
Title: Tools for Various R Functions Helpers
Description: Contains miscellaneous functions useful for managing 'NetCDF' files (see <https://en.wikipedia.org/wiki/NetCDF>), get moon phase and time for sun rise and fall, tide level, analyse and reconstruct periodic time series of temperature with irregular sinusoidal pattern, show scales and wind rose in plot with change of color of text, Metropolis-Hastings algorithm for Bayesian MCMC analysis, plot graphs or boxplot with error bars, search files in disk by there names or their content, read the contents of all files from a folder at one time.
Author: Marc Girondot [aut, cre]
Maintainer: Marc Girondot <marc.girondot@gmail.com>
Diff between HelpersMG versions 2026.3.31 dated 2026-03-31 and 2026.8.24 dated 2026-08-24
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Title: Dependent Mixture Models - Hidden Markov Models of GLMs and
Other Distributions in S4
Description: Fits latent (hidden) Markov models on mixed categorical and continuous (time series) data, otherwise known as dependent mixture models, see Visser & Speekenbrink (2010, <doi:10.18637/jss.v036.i07>).
Author: Ingmar Visser [aut, cre],
Maarten Speekenbrink [aut]
Maintainer: Ingmar Visser <i.visser@uva.nl>
This is a re-admission after prior archival of version 1.5-3 dated 2026-06-17
Diff between depmixS4 versions 1.5-3 dated 2026-06-17 and 1.5-4 dated 2026-08-24
depmixS4-1.5-3/depmixS4/tests/test4examples.R |only depmixS4-1.5-4/depmixS4/DESCRIPTION | 22 +++- depmixS4-1.5-4/depmixS4/MD5 | 15 +- depmixS4-1.5-4/depmixS4/build/vignette.rds |binary depmixS4-1.5-4/depmixS4/inst/doc/depmixS4.pdf |binary depmixS4-1.5-4/depmixS4/man/depmix.fit.Rd | 5 depmixS4-1.5-4/depmixS4/man/multistart.Rd | 141 +++++++++++++------------- depmixS4-1.5-4/depmixS4/man/response-class.Rd | 4 depmixS4-1.5-4/depmixS4/man/vcov.Rd | 6 - 9 files changed, 104 insertions(+), 89 deletions(-)
Title: Building, Fitting and Evaluating PK/PD Modeles
Description: Provides a unified workflow for building, fitting using external engines, and evaluating ordinary differential equation (ODE)-based pharmacokinetic/pharmacodynamic (PK/PD) models. Supports generation of estimation scenarios and control files for external engines (e.g., 'Monolix'), simulation of models using 'rxode2', and creation of goodness-of-fit diagnostics. Includes tools for covariate modeling, virtual population design, and local and global sensitivity analyses.
Author: Victor Sokolov [cph, aut] ,
Anna Mikhailova [cre, aut] ,
Yaroslav Ugolkov [aut] ,
Anatoly Pokladyuk [aut] ,
Alina Melnikova [aut] ,
Victoria Kulesh [aut]
Maintainer: Anna Mikhailova <anna.mikhailova@msdecisions.tech>
Diff between SimuRg versions 0.2.0 dated 2026-05-19 and 0.2.2 dated 2026-08-24
SimuRg-0.2.0/SimuRg/inst/extdata/Monolix_objects/proj-solo/FisherInformation/correlationEstimatesLin.txt |only SimuRg-0.2.0/SimuRg/inst/extdata/Monolix_objects/proj-solo/FisherInformation/covarianceEstimatesLin.txt |only SimuRg-0.2.2/SimuRg/DESCRIPTION | 45 SimuRg-0.2.2/SimuRg/MD5 | 186 SimuRg-0.2.2/SimuRg/NAMESPACE | 6 SimuRg-0.2.2/SimuRg/NEWS.md | 291 SimuRg-0.2.2/SimuRg/R/SimuRg.R | 22 SimuRg-0.2.2/SimuRg/R/data.R | 616 +- SimuRg-0.2.2/SimuRg/R/sg-converter.R | 3004 +++++----- SimuRg-0.2.2/SimuRg/R/sg-covsearch.R |only SimuRg-0.2.2/SimuRg/R/sg-covsens-sim.R | 1635 +++-- SimuRg-0.2.2/SimuRg/R/sg-covsens-vis.R | 745 +- SimuRg-0.2.2/SimuRg/R/sg-fit.R | 1329 ++-- SimuRg-0.2.2/SimuRg/R/sg-globalsens-sim.R | 4 SimuRg-0.2.2/SimuRg/R/sg-gof-obpr.R | 528 - SimuRg-0.2.2/SimuRg/R/sg-gof-par-cov.R | 4 SimuRg-0.2.2/SimuRg/R/sg-gof-par-dist.R | 915 +-- SimuRg-0.2.2/SimuRg/R/sg-gof-res-dist.R | 342 - SimuRg-0.2.2/SimuRg/R/sg-gof-res.R | 5 SimuRg-0.2.2/SimuRg/R/sg-gof-tp.R | 549 - SimuRg-0.2.2/SimuRg/R/sg-localsens-sim.R | 2 SimuRg-0.2.2/SimuRg/R/sg-localsens-vis.R | 4 SimuRg-0.2.2/SimuRg/R/sg-modbuild.R | 672 +- SimuRg-0.2.2/SimuRg/R/sg-modcomp.R | 305 - SimuRg-0.2.2/SimuRg/R/sg-multistart.R | 586 - SimuRg-0.2.2/SimuRg/R/sg-parsum.R | 87 SimuRg-0.2.2/SimuRg/R/sg-predist-sim.R | 166 SimuRg-0.2.2/SimuRg/R/sg-predist-vis.R |only SimuRg-0.2.2/SimuRg/R/sg-sim-tp.R | 497 - SimuRg-0.2.2/SimuRg/R/sg-sim.R | 60 SimuRg-0.2.2/SimuRg/R/sg-translator.R | 2156 +++---- SimuRg-0.2.2/SimuRg/R/sg-vpc-sim.R | 286 SimuRg-0.2.2/SimuRg/R/sg-vpc-vis.R | 1270 ++-- SimuRg-0.2.2/SimuRg/R/sg-vpop-est.R | 1635 ++--- SimuRg-0.2.2/SimuRg/R/utils.R | 1596 ++--- SimuRg-0.2.2/SimuRg/README.md | 36 SimuRg-0.2.2/SimuRg/build |only SimuRg-0.2.2/SimuRg/data/gmo_pk1c.rda |only SimuRg-0.2.2/SimuRg/data/gsi_pk1c.rda |only SimuRg-0.2.2/SimuRg/inst/doc |only SimuRg-0.2.2/SimuRg/inst/extdata/Monolix_objects/proj-solo.mlxtran | 148 SimuRg-0.2.2/SimuRg/inst/extdata/simurg_object/gmo_pk1c_model.txt |only SimuRg-0.2.2/SimuRg/man/GCO.Rd |only SimuRg-0.2.2/SimuRg/man/GFO.Rd |only SimuRg-0.2.2/SimuRg/man/GMO.Rd |only SimuRg-0.2.2/SimuRg/man/GSI.Rd |only SimuRg-0.2.2/SimuRg/man/GSO.Rd |only SimuRg-0.2.2/SimuRg/man/SimuRg-package.Rd | 24 SimuRg-0.2.2/SimuRg/man/figures |only SimuRg-0.2.2/SimuRg/man/gfo4cov.Rd | 2 SimuRg-0.2.2/SimuRg/man/gmo_pk1c.Rd |only SimuRg-0.2.2/SimuRg/man/gsi_pk1c.Rd |only SimuRg-0.2.2/SimuRg/man/read_smrg_ctrl.Rd |only SimuRg-0.2.2/SimuRg/man/read_smrg_obj.Rd | 16 SimuRg-0.2.2/SimuRg/man/sg_converter.Rd | 41 SimuRg-0.2.2/SimuRg/man/sg_covsearch.Rd |only SimuRg-0.2.2/SimuRg/man/sg_covsens_sim.Rd | 88 SimuRg-0.2.2/SimuRg/man/sg_covsens_vis.Rd | 30 SimuRg-0.2.2/SimuRg/man/sg_dummy.Rd | 66 SimuRg-0.2.2/SimuRg/man/sg_fit.Rd | 10 SimuRg-0.2.2/SimuRg/man/sg_globalsens_sim.Rd | 16 SimuRg-0.2.2/SimuRg/man/sg_gof_obpr.Rd | 11 SimuRg-0.2.2/SimuRg/man/sg_gof_par_cov.Rd | 9 SimuRg-0.2.2/SimuRg/man/sg_gof_par_dist.Rd | 30 SimuRg-0.2.2/SimuRg/man/sg_gof_res.Rd | 12 SimuRg-0.2.2/SimuRg/man/sg_gof_res_dist.Rd | 19 SimuRg-0.2.2/SimuRg/man/sg_gof_tp.Rd | 20 SimuRg-0.2.2/SimuRg/man/sg_localsens_sim.Rd | 2 SimuRg-0.2.2/SimuRg/man/sg_localsens_vis.Rd | 4 SimuRg-0.2.2/SimuRg/man/sg_modcomp.Rd | 10 SimuRg-0.2.2/SimuRg/man/sg_parsum.Rd | 9 SimuRg-0.2.2/SimuRg/man/sg_predist_sim.Rd | 41 SimuRg-0.2.2/SimuRg/man/sg_predist_vis.Rd |only SimuRg-0.2.2/SimuRg/man/sg_sim.Rd | 40 SimuRg-0.2.2/SimuRg/man/sg_sim_tp.Rd | 3 SimuRg-0.2.2/SimuRg/man/sg_vpc_sim.Rd | 14 SimuRg-0.2.2/SimuRg/man/sg_vpc_vis.Rd | 5 SimuRg-0.2.2/SimuRg/man/sg_vpop_est.Rd | 26 SimuRg-0.2.2/SimuRg/tests/testthat/_snaps/sg-gof-res-dist.new.md |only SimuRg-0.2.2/SimuRg/tests/testthat/_snaps/sg-gof-tp.md | 640 +- SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-converter.R | 324 + SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-covsearch.R |only SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-covsens-sim.R | 184 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-covsens-vis.R | 84 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-fit.R | 146 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-globalsens-sim.R | 63 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-globalsens-vis.R | 57 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-gof-obpr.R | 61 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-gof-par-cov.R | 2 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-gof-par-dist.R | 1 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-gof-res-dist.R | 2 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-gof-res.R | 2 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-gof-tp.R | 5 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-localsens-sim.R | 1 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-localsens-vis.R | 2 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-modbuild.R | 1 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-modcomp.R | 1 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-parsum.R | 2 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-predist-sim.R | 246 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-predist-vis.R |only SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-sim.R | 597 + SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-vpc-sim.R | 9 SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-vpc-vis.R | 1034 +-- SimuRg-0.2.2/SimuRg/tests/testthat/test-sg-vpop-est.R | 529 + SimuRg-0.2.2/SimuRg/vignettes |only 105 files changed, 13387 insertions(+), 10886 deletions(-)
More information about pressfreedom.data at CRAN
Permanent link
Title: Complex Partial Least Squares Structural Equation Modeling
Description: Estimate complex Structural Equation Models (SEMs) by fitting Partial
Least Squares Structural Equation Modeling (PLS-SEM) and Partial Least
Squares consistent Structural Equation Modeling (PLSc-SEM) specifications
that handle categorical data, non-linear relations, and multilevel
structures. The implementation follows Lohmöller (1989) for the classic PLS-SEM
algorithm, Dijkstra and Henseler (2015) for consistent PLSc-SEM, Dijkstra et al.,
(2014) for nonlinear PLSc-SEM, and Schuberth, Henseler, Dijkstra (2018)
for ordinal PLS-SEM and PLSc-SEM. Additional extensions are under development.
The MC-OrdPLSc algorithm, used to handle ordinal interaction models is detailed
in Slupphaug et al., (2026).
References:
Lohmöller, J.-B. (1989, ISBN:9783790803002).
"Latent Variable Path Modeling with Partial Least Squares."
Dijkstra, T. K., & Henseler, J. (2015).
<doi:10.1016/j.jmva.2015.06.002>.
"Consistent partial least squares path modeling."
Dijkstra, T. K., & Schermelleh-Engel, K. [...truncated...]
Author: Kjell Solem Slupphaug [aut, cre]
Maintainer: Kjell Solem Slupphaug <slupphaugkjell@gmail.com>
Diff between plssem versions 0.1.3 dated 2026-07-03 and 0.1.4 dated 2026-08-24
DESCRIPTION | 12 MD5 | 67 ++-- R/fit_measures.R | 6 R/ho_helpers.R | 21 - R/mcpls.R | 10 R/model_generics.R | 29 + R/model_partable.R | 7 R/model_partable_utils.R | 13 R/model_specification.R | 5 R/model_state.R | 2 R/model_syntax.R | 26 + R/pls_cor.R |only R/pls_data.R | 4 R/pls_fit.R | 46 ++- R/pls_msg.R | 2 R/pls_polycor.R |only R/pls_polyserial.R |only R/pls_steps.R | 15 - R/pls_unstandardized.R | 22 + R/plsc_nlin_dijkstra.R | 166 +++++------ R/threshold_expectations.R |only R/utils.R | 52 +++ R/utils_custom_params.R |only build/vignette.rds |binary inst/doc/categorical-models.html | 354 ++++++++++++++++++------ inst/doc/higher-order.html | 360 +++++++++++++++++++----- inst/doc/interaction-models.html | 355 ++++++++++++++++++------ inst/doc/linear-models.html | 349 ++++++++++++++++++----- inst/doc/mc-pls.html | 484 ++++++++++++++++++++++++--------- inst/doc/missing-imputation.html | 415 +++++++++++++++++++++------- inst/doc/multilevel-models.html | 395 ++++++++++++++++++++------ inst/doc/ordinal-regression.html | 379 +++++++++++++++++++------ inst/doc/parallel-bootstrapping.html | 382 +++++++++++++++++++------- inst/doc/unstandardized-estimates.html | 392 ++++++++++++++++++++------ man/coef-PlsModel-method.Rd | 4 man/vcov-PlsModel-method.Rd | 4 tests/testthat/test_oneint.R | 7 37 files changed, 3306 insertions(+), 1079 deletions(-)
Title: Spatial Projection of Network Signals along Geodesic Paths
Description: For a given graph containing vertices, edges, and a signal
associated with the vertices, the 'PathwaySpace' package performs a convolution
operation, which involves a weighted combination of neighboring vertices and
their associated signals. The package uses a decay function to project these
signals, creating geodesic paths on a 2D-image space. 'PathwaySpace' has various
applications, such as visualizing network data in a graphical format that
highlights the relationships and signal strengths between vertices. By
combining graph theory, signal processing, and visualization, 'PathwaySpace'
provides a way of representing graph data on a continuous projection space.
Based on methods introduced in Tercan et al. (2025)
<doi:10.1016/j.xpro.2025.103681> and Ellrott et al. (2025)
<doi:10.1016/j.ccell.2024.12.002>.
Author: Sysbiolab Team [aut],
Victor Apolonio [ctb],
Jonathan Back [ctb],
Lana Querne [ctb],
Vinicius Chagas [ctb],
Bahar Tercan [ctb],
Mauro Castro [cre]
Maintainer: Mauro Castro <mauro.a.castro@gmail.com>
Diff between PathwaySpace versions 1.5.0 dated 2026-07-30 and 1.5.1 dated 2026-08-24
DESCRIPTION | 6 +- MD5 | 14 +++--- R/pspace-checks.R | 3 - R/pspace-classes.R | 10 ---- R/pspace-plots.R | 2 inst/doc/PathwaySpace.html | 36 ++++++++-------- man/PathwaySpace-class.Rd | 16 ------- vignettes/bibliography.bib | 99 +++++++++++++++++++++++++++++++++++++++++++++ 8 files changed, 132 insertions(+), 54 deletions(-)
Title: Ordinal Relations
Description: Functions to handle ordinal relations reflected within the feature space. Those function allow to search for ordinal relations in multi-class datasets. One can check whether proposed relations are reflected in a specific feature representation. Furthermore, it provides functions to filter, organize and further analyze those ordinal relations.
Author: L Lausser [aut, cre],
LM Schaefer [aut],
R Szekely [aut],
A Stolnicu [aut],
HA Kestler [aut]
Maintainer: L Lausser <ludwig.lausser@thi.de>
Diff between ORION versions 1.1.1 dated 2026-02-12 and 1.1.2 dated 2026-08-24
DESCRIPTION | 17 MD5 | 8 build/vignette.rds |binary inst/doc/ORION.html | 1305 ++++++++++++++++----------------------------------- man/ORION-package.Rd | 2 5 files changed, 445 insertions(+), 887 deletions(-)
Title: Framework for Patient-Level Microsimulation of Risk Factor
Trajectories & Hazard-Based Events
Description: Fast, flexible, patient-level microsimulation. Time-stepped simulation with a 'C++' back-end from user-supplied initial population, trajectories, hazards, and corresponding event transitions. User-defined aggregate time series histories are returned together with the final population. Designed for simulation of chronic diseases with continuous and evolving risk factors, but could easily be applied more generally.
Author: Pete Dodd [aut, cre] ,
Robert Chisholm [aut] ,
University of Sheffield [cph],
Horizon Europe [fnd]
Maintainer: Pete Dodd <p.j.dodd@sheffield.ac.uk>
This is a re-admission after prior archival of version 0.0.1 dated 2026-03-16
Diff between golden versions 0.0.1 dated 2026-03-16 and 0.0.4 dated 2026-08-24
golden-0.0.1/golden/README.md |only golden-0.0.1/golden/inst/doc/getting-started.html |only golden-0.0.4/golden/DESCRIPTION | 8 golden-0.0.4/golden/MD5 | 48 - golden-0.0.4/golden/R/data.R | 134 ++- golden-0.0.4/golden/R/trajectory.R | 55 - golden-0.0.4/golden/R/transition.R | 41 - golden-0.0.4/golden/R/validation.R | 8 golden-0.0.4/golden/build/vignette.rds |binary golden-0.0.4/golden/inst/doc/getting-started.R | 222 ++++-- golden-0.0.4/golden/inst/doc/getting-started.Rmd | 267 +++++-- golden-0.0.4/golden/inst/doc/getting-started.pdf |only golden-0.0.4/golden/man/bmi_fits.Rd | 11 golden-0.0.4/golden/man/globorisk_coefs.Rd | 32 golden-0.0.4/golden/man/globorisk_cvdr.Rd | 18 golden-0.0.4/golden/man/globorisk_rf.Rd | 23 golden-0.0.4/golden/man/lifetable_data.Rd | 16 golden-0.0.4/golden/man/new_trajectory.Rd | 6 golden-0.0.4/golden/man/new_transition.Rd | 4 golden-0.0.4/golden/man/pop_snapshot.Rd | 13 golden-0.0.4/golden/src/Simulation.cpp | 18 golden-0.0.4/golden/src/rcpp_interface.cpp | 23 golden-0.0.4/golden/tests/testthat/helper-utils.R | 65 - golden-0.0.4/golden/tests/testthat/test-check.R | 670 +++++++++++-------- golden-0.0.4/golden/tests/testthat/test-trajectory.R | 157 ++-- golden-0.0.4/golden/vignettes/getting-started.Rmd | 267 +++++-- golden-0.0.4/golden/vignettes/getting-started.html |only 27 files changed, 1410 insertions(+), 696 deletions(-)
Title: Generate Citation File Format ('CFF') Metadata
Description: Citation File Format ('CFF') version 1.2.0
<doi:10.5281/zenodo.5171937> is a human- and machine-readable file
format for software citation metadata. Core utilities generate, read,
write and validate Citation File Format metadata for 'R' packages.
Author: Diego Hernangomez [aut, cre, cph] ,
Joao Martins [rev] ,
Scott Chamberlain [rev]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between cffr versions 1.4.1 dated 2026-06-17 and 1.4.2 dated 2026-08-24
cffr-1.4.1/cffr/R/as_bibentry.R |only cffr-1.4.1/cffr/R/as_cff.R |only cffr-1.4.1/cffr/R/as_cff_person.R |only cffr-1.4.1/cffr/R/as_cff_reference.R |only cffr-1.4.1/cffr/R/cff_create.R |only cffr-1.4.1/cffr/R/cff_gha_update.R |only cffr-1.4.1/cffr/R/cff_git_hook.R |only cffr-1.4.1/cffr/R/cff_modify.R |only cffr-1.4.1/cffr/R/cff_read.R |only cffr-1.4.1/cffr/R/cff_read_bib_text.R |only cffr-1.4.1/cffr/R/cff_validate.R |only cffr-1.4.1/cffr/R/cff_write.R |only cffr-1.4.1/cffr/R/cff_write_misc.R |only cffr-1.4.1/cffr/R/encoded_utf_to_latex.R |only cffr-1.4.1/cffr/R/utils-cff_read.R |only cffr-1.4.1/cffr/R/utils-cff_ref.R |only cffr-1.4.1/cffr/inst/doc/joss-paper.html |only cffr-1.4.1/cffr/inst/doc/joss-paper.qmd |only cffr-1.4.1/cffr/tests/testthat/_snaps/as_bibentry.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/as_cff.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/as_cff_person.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/as_cff_reference.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_create.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_gha_update.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_modify.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_read.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_read_bib_text.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_validate.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_write |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_write.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_write_misc |only cffr-1.4.1/cffr/tests/testthat/_snaps/cff_write_misc.md |only cffr-1.4.1/cffr/tests/testthat/_snaps/utils-cff_ref.md |only cffr-1.4.1/cffr/tests/testthat/test-as_bibentry.R |only cffr-1.4.1/cffr/tests/testthat/test-as_cff.R |only cffr-1.4.1/cffr/tests/testthat/test-as_cff_person.R |only cffr-1.4.1/cffr/tests/testthat/test-as_cff_reference.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_create.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_gha_update.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_modify.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_read.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_read_bib_text.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_validate.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_write.R |only cffr-1.4.1/cffr/tests/testthat/test-cff_write_misc.R |only cffr-1.4.1/cffr/tests/testthat/test-mock-package.R |only cffr-1.4.1/cffr/tests/testthat/test-utils-cff_create.R |only cffr-1.4.1/cffr/tests/testthat/test-utils-cff_ref.R |only cffr-1.4.1/cffr/vignettes/joss-paper.qmd |only cffr-1.4.2/cffr/DESCRIPTION | 14 cffr-1.4.2/cffr/MD5 | 402 - cffr-1.4.2/cffr/NAMESPACE | 178 cffr-1.4.2/cffr/NEWS.md | 107 cffr-1.4.2/cffr/R/as-bibentry.R |only cffr-1.4.2/cffr/R/as-cff-person.R |only cffr-1.4.2/cffr/R/as-cff-reference.R |only cffr-1.4.2/cffr/R/as-cff.R |only cffr-1.4.2/cffr/R/cff-create.R |only cffr-1.4.2/cffr/R/cff-gha-update.R |only cffr-1.4.2/cffr/R/cff-git-hook.R |only cffr-1.4.2/cffr/R/cff-modify.R |only cffr-1.4.2/cffr/R/cff-read-bib-text.R |only cffr-1.4.2/cffr/R/cff-read.R |only cffr-1.4.2/cffr/R/cff-validate.R |only cffr-1.4.2/cffr/R/cff-write-misc.R |only cffr-1.4.2/cffr/R/cff-write.R |only cffr-1.4.2/cffr/R/cff.R | 6 cffr-1.4.2/cffr/R/cffr-package.R | 14 cffr-1.4.2/cffr/R/data.R | 10 cffr-1.4.2/cffr/R/deprecated.R | 27 cffr-1.4.2/cffr/R/docs.R | 15 cffr-1.4.2/cffr/R/encoded-utf-to-latex.R |only cffr-1.4.2/cffr/R/methods.R | 26 cffr-1.4.2/cffr/R/utils-alerts.R | 35 cffr-1.4.2/cffr/R/utils-bib.R | 2 cffr-1.4.2/cffr/R/utils-cff-read.R |only cffr-1.4.2/cffr/R/utils-cff-ref.R |only cffr-1.4.2/cffr/R/utils-create.R | 19 cffr-1.4.2/cffr/R/utils-persons.R | 16 cffr-1.4.2/cffr/R/utils-schema.R | 25 cffr-1.4.2/cffr/R/utils.R | 40 cffr-1.4.2/cffr/R/zzz.R | 2 cffr-1.4.2/cffr/README.md | 98 cffr-1.4.2/cffr/build/partial.rdb |binary cffr-1.4.2/cffr/build/vignette.rds |binary cffr-1.4.2/cffr/data/cran_to_spdx.rda |binary cffr-1.4.2/cffr/inst/CITATION | 134 cffr-1.4.2/cffr/inst/REFERENCES.bib | 163 cffr-1.4.2/cffr/inst/WORDLIST | 13 cffr-1.4.2/cffr/inst/bash/citation-cff-pre-commit.sh | 72 cffr-1.4.2/cffr/inst/doc/bibtex-cff.R | 2 cffr-1.4.2/cffr/inst/doc/bibtex-cff.html | 169 cffr-1.4.2/cffr/inst/doc/bibtex-cff.qmd | 269 cffr-1.4.2/cffr/inst/doc/cffr.html | 73 cffr-1.4.2/cffr/inst/doc/cffr.qmd | 48 cffr-1.4.2/cffr/inst/doc/r-cff.R | 2 cffr-1.4.2/cffr/inst/doc/r-cff.html | 450 - cffr-1.4.2/cffr/inst/doc/r-cff.qmd | 90 cffr-1.4.2/cffr/inst/examples/CITATION_auto | 50 cffr-1.4.2/cffr/inst/examples/CITATION_basic | 46 cffr-1.4.2/cffr/inst/examples/CITATION_basic.cff | 48 cffr-1.4.2/cffr/inst/examples/CITATION_complete.cff | 1846 ++-- cffr-1.4.2/cffr/inst/examples/CITATION_dx_doi | 28 cffr-1.4.2/cffr/inst/examples/CITATION_error.cff | 38 cffr-1.4.2/cffr/inst/examples/CITATION_lang.cff | 106 cffr-1.4.2/cffr/inst/examples/CITATION_rmarkdown | 100 cffr-1.4.2/cffr/inst/examples/CITATION_skeleton.cff | 16 cffr-1.4.2/cffr/inst/examples/CITATION_surveillance | 56 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_basic | 32 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_basic_plain_authors | 26 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_basicdate | 34 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_bioconductor | 134 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_codeberg | 84 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_gitlab | 156 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_many_persons | 84 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_many_urls | 38 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_no_URL | 152 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_no_encoding | 34 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_posit_package_manager | 62 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_quint | 76 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_r_universe | 216 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_rgeos | 86 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_surveillance | 212 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_two_emails | 74 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_twomaintainers | 106 cffr-1.4.2/cffr/inst/examples/DESCRIPTION_wrong_urls | 70 cffr-1.4.2/cffr/inst/examples/example.bib | 52 cffr-1.4.2/cffr/inst/examples/preferred-citation-book-missing.cff | 34 cffr-1.4.2/cffr/inst/examples/preferred-citation-book.cff | 40 cffr-1.4.2/cffr/inst/examples/preferred-citation-conference-paper-2.cff | 74 cffr-1.4.2/cffr/inst/examples/preferred-citation-conference-paper-missing.cff | 56 cffr-1.4.2/cffr/inst/examples/preferred-citation-conference-paper.cff | 94 cffr-1.4.2/cffr/inst/examples/preferred-citation-manual.cff | 82 cffr-1.4.2/cffr/inst/examples/preferred-citation-no-month.cff | 28 cffr-1.4.2/cffr/inst/examples/preferred-citation-no-vol.cff | 60 cffr-1.4.2/cffr/inst/examples/preferred-citation-pamphlet.cff | 58 cffr-1.4.2/cffr/inst/examples/preferred-citation-report-no-affiliation.cff | 58 cffr-1.4.2/cffr/inst/examples/preferred-citation-report-no-institution.cff | 60 cffr-1.4.2/cffr/inst/examples/preferred-citation-report.cff | 64 cffr-1.4.2/cffr/inst/examples/preferred-citation-unpublished.cff | 60 cffr-1.4.2/cffr/inst/examples/reprozip.cff | 282 cffr-1.4.2/cffr/inst/examples/smith-et-al.cff | 58 cffr-1.4.2/cffr/inst/examples/tidyverse-joss-paper.cff | 58 cffr-1.4.2/cffr/inst/examples/tidyverse-software.cff | 28 cffr-1.4.2/cffr/inst/extdata/SPDX_License_List.csv | 740 - cffr-1.4.2/cffr/inst/extdata/cran_licenses.csv | 312 cffr-1.4.2/cffr/inst/extdata/crosswalk_tables.csv | 498 - cffr-1.4.2/cffr/inst/schema/schema.json | 3764 +++++----- cffr-1.4.2/cffr/inst/schemaorg.json | 8 cffr-1.4.2/cffr/inst/yaml/update-citation-cff.yaml | 120 cffr-1.4.2/cffr/man/as_bibentry.Rd | 50 cffr-1.4.2/cffr/man/as_cff.Rd | 23 cffr-1.4.2/cffr/man/as_cff_person.Rd | 49 cffr-1.4.2/cffr/man/cff.Rd | 7 cffr-1.4.2/cffr/man/cff_class.Rd | 73 cffr-1.4.2/cffr/man/cff_create.Rd | 33 cffr-1.4.2/cffr/man/cff_gha_update.Rd | 9 cffr-1.4.2/cffr/man/cff_git_hook.Rd | 10 cffr-1.4.2/cffr/man/cff_modify.Rd | 13 cffr-1.4.2/cffr/man/cff_read.Rd | 30 cffr-1.4.2/cffr/man/cff_read_bib_text.Rd | 13 cffr-1.4.2/cffr/man/cff_schema.Rd | 13 cffr-1.4.2/cffr/man/cff_validate.Rd | 17 cffr-1.4.2/cffr/man/cff_write.Rd | 56 cffr-1.4.2/cffr/man/cff_write_misc.Rd | 20 cffr-1.4.2/cffr/man/cffr-package.Rd | 17 cffr-1.4.2/cffr/man/chunks/cffclass.Rmd | 67 cffr-1.4.2/cffr/man/chunks/schema-guide.Rmd |only cffr-1.4.2/cffr/man/cran_to_spdx.Rd | 10 cffr-1.4.2/cffr/man/deprecated_cff_bibentry.Rd | 8 cffr-1.4.2/cffr/man/deprecated_cff_from_bib.Rd | 9 cffr-1.4.2/cffr/man/deprecated_cff_person.Rd | 6 cffr-1.4.2/cffr/man/deprecated_cff_to_bib.Rd | 6 cffr-1.4.2/cffr/man/deprecated_write.Rd | 9 cffr-1.4.2/cffr/man/encoded_utf_to_latex.Rd | 6 cffr-1.4.2/cffr/man/figures/lifecycle-archived.svg | 42 cffr-1.4.2/cffr/man/figures/lifecycle-defunct.svg | 42 cffr-1.4.2/cffr/man/figures/lifecycle-deprecated.svg | 42 cffr-1.4.2/cffr/man/figures/lifecycle-experimental.svg | 42 cffr-1.4.2/cffr/man/figures/lifecycle-maturing.svg | 42 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Previous versions (as known to CRANberries) which should be available via the Archive link are:
2017-02-17 0.0.3
2016-07-13 0.0.2
2016-06-06 0.0.1
Title: Access 'umwelt.info' API
Description: Provides an R-based access to the datasets including their
resources from the portal <https://umwelt.info>. The package allows for
an easy integration of those datasets into your R-based workflows. The
functionality of the package mirrors the web-based access as provided
at <https://umwelt.info>. You can use the same queries and get the same
datasets by accessing our API.
Author: Luise Quoss [aut, cre],
Johannes Vogel [aut],
Maximilian Berthold [aut],
Nationales Zentrum fuer Umwelt- und Naturschutzinformationen [cph]
Maintainer: Luise Quoss <luise.quoss@uba.de>
Diff between umweltapir versions 0.2.1 dated 2026-06-24 and 0.2.2 dated 2026-08-24
DESCRIPTION | 18 +++++++-------- MD5 | 12 +++++----- NEWS.md | 4 +++ R/fetch_api.R | 47 ++++++++++++++++++++++------------------ README.md | 28 ++++++++++++++++++----- man/fetch_data.Rd | 47 ++++++++++++++++++++++------------------ tests/testthat/test-fetch_api.R | 20 +++++++++++++++++ 7 files changed, 113 insertions(+), 63 deletions(-)
Title: Phylogenetic Tree Statistics
Description: Collection of phylogenetic tree statistics,
collected throughout the literature. All functions have been
written to maximize computation speed. The package includes
umbrella functions to calculate all statistics, all balance
associated statistics, or all branching time related statistics.
Furthermore, the 'treestats' package supports summary statistic
calculations on Ltables, provides speed-improved coding of
branching times, Ltable conversion and includes algorithms to
create intermediately balanced trees. Full description can be
found in Janzen (2024) <doi:10.1016/j.ympev.2024.108168>.
Author: Thijs Janzen [cre, aut]
Maintainer: Thijs Janzen <thijsjanzen@gmail.com>
Diff between treestats versions 1.71.12 dated 2026-06-16 and 1.71.13 dated 2026-08-24
treestats-1.71.12/treestats/inst/include/b1.h |only treestats-1.71.12/treestats/inst/include/max_depth.h |only treestats-1.71.12/treestats/inst/include/sackin.h |only treestats-1.71.13/treestats/DESCRIPTION | 6 treestats-1.71.13/treestats/MD5 | 287 ++-- treestats-1.71.13/treestats/NAMESPACE | 1 treestats-1.71.13/treestats/NEWS.md | 67 - treestats-1.71.13/treestats/R/ILnumber.R | 4 treestats-1.71.13/treestats/R/J_stat.R | 5 treestats-1.71.13/treestats/R/RcppExports.R | 48 treestats-1.71.13/treestats/R/area_per_pair.R | 5 treestats-1.71.13/treestats/R/average_leaf_depth.R | 2 treestats-1.71.13/treestats/R/avgLadder.R | 2 treestats-1.71.13/treestats/R/avg_vertex_depth.R | 5 treestats-1.71.13/treestats/R/b1.R | 8 treestats-1.71.13/treestats/R/b2.R | 6 treestats-1.71.13/treestats/R/blum.R | 2 treestats-1.71.13/treestats/R/calc_all_stats.R | 8 treestats-1.71.13/treestats/R/calc_topology_stats.R | 3 treestats-1.71.13/treestats/R/cherries.R | 2 treestats-1.71.13/treestats/R/crown_age.R | 2 treestats-1.71.13/treestats/R/diameter.R | 6 treestats-1.71.13/treestats/R/double_cherries.R | 2 treestats-1.71.13/treestats/R/eigen_centrality.R | 2 treestats-1.71.13/treestats/R/four_prong.R | 8 treestats-1.71.13/treestats/R/imbal_steps.R | 2 treestats-1.71.13/treestats/R/inv_branch_dist.R | 2 treestats-1.71.13/treestats/R/list_statistics.R | 6 treestats-1.71.13/treestats/R/max_betweenness.R | 5 treestats-1.71.13/treestats/R/max_closeness.R | 8 treestats-1.71.13/treestats/R/max_del_width.R | 4 treestats-1.71.13/treestats/R/max_depth.R | 2 treestats-1.71.13/treestats/R/max_ladder.R | 3 treestats-1.71.13/treestats/R/max_width.R | 9 treestats-1.71.13/treestats/R/mean_pair_dist.R | 5 treestats-1.71.13/treestats/R/minmax_adj.R | 2 treestats-1.71.13/treestats/R/minmax_laplace.R | 4 treestats-1.71.13/treestats/R/mntd.R | 7 treestats-1.71.13/treestats/R/mw_over_md.R | 2 treestats-1.71.13/treestats/R/phylogenetic_diversity.R | 7 treestats-1.71.13/treestats/R/pitchforks.R | 2 treestats-1.71.13/treestats/R/psv.R | 5 treestats-1.71.13/treestats/R/rogers.R | 3 treestats-1.71.13/treestats/R/root_imbalance.R | 11 treestats-1.71.13/treestats/R/rpanda.R | 25 treestats-1.71.13/treestats/R/sackin.R | 2 treestats-1.71.13/treestats/R/tot_coph.R | 2 treestats-1.71.13/treestats/R/tot_internal_path.R | 1 treestats-1.71.13/treestats/R/tot_path.R | 7 treestats-1.71.13/treestats/R/treeness.R | 6 treestats-1.71.13/treestats/R/util.R | 18 treestats-1.71.13/treestats/R/var_leaf_depth.R | 2 treestats-1.71.13/treestats/R/var_pair_dist.R | 6 treestats-1.71.13/treestats/R/wiener.R | 8 treestats-1.71.13/treestats/README.md | 595 ++++------ treestats-1.71.13/treestats/inst/doc/Correlations.R | 131 +- treestats-1.71.13/treestats/inst/doc/Correlations.Rmd | 149 ++ treestats-1.71.13/treestats/inst/doc/Correlations.html | 163 ++ treestats-1.71.13/treestats/inst/doc/Getting_started.html | 78 - treestats-1.71.13/treestats/inst/doc/Speed_improvement.html | 4 treestats-1.71.13/treestats/inst/doc/Tree_size.R | 39 treestats-1.71.13/treestats/inst/doc/Tree_size.Rmd | 39 treestats-1.71.13/treestats/inst/doc/Tree_size.html | 52 treestats-1.71.13/treestats/inst/include/ILnumber.h | 7 treestats-1.71.13/treestats/inst/include/centralities.h | 276 ++-- treestats-1.71.13/treestats/inst/include/depth.h | 411 ++++++ treestats-1.71.13/treestats/inst/include/ltable.h | 43 treestats-1.71.13/treestats/inst/include/mpd.h | 94 - treestats-1.71.13/treestats/inst/include/phylodiv.h | 1 treestats-1.71.13/treestats/inst/include/util.h | 39 treestats-1.71.13/treestats/man/ILnumber.Rd | 3 treestats-1.71.13/treestats/man/avg_ladder.Rd | 2 treestats-1.71.13/treestats/man/b1.Rd | 6 treestats-1.71.13/treestats/man/b2.Rd | 4 treestats-1.71.13/treestats/man/check_binary.Rd |only treestats-1.71.13/treestats/man/four_prong.Rd | 6 treestats-1.71.13/treestats/man/laplacian_spectrum.Rd | 20 treestats-1.71.13/treestats/man/root_imbalance.Rd | 4 treestats-1.71.13/treestats/man/tot_path_length.Rd | 5 treestats-1.71.13/treestats/src/RcppExports.cpp | 139 +- treestats-1.71.13/treestats/src/centralities.cpp | 36 treestats-1.71.13/treestats/src/colless.cpp | 19 treestats-1.71.13/treestats/src/depth.cpp | 52 treestats-1.71.13/treestats/src/mpd.cpp | 9 treestats-1.71.13/treestats/src/sackin.cpp | 70 - treestats-1.71.13/treestats/tests/testthat/setup.R |only treestats-1.71.13/treestats/tests/testthat/test-ILnumber.R | 37 treestats-1.71.13/treestats/tests/testthat/test-area-per-pair.R | 26 treestats-1.71.13/treestats/tests/testthat/test-average_leaf_depth.R | 36 treestats-1.71.13/treestats/tests/testthat/test-avgLadder.R | 26 treestats-1.71.13/treestats/tests/testthat/test-avg_vertex_depth.R | 29 treestats-1.71.13/treestats/tests/testthat/test-b1.R | 38 treestats-1.71.13/treestats/tests/testthat/test-b2.R | 37 treestats-1.71.13/treestats/tests/testthat/test-beta.R | 35 treestats-1.71.13/treestats/tests/testthat/test-blum.R | 29 treestats-1.71.13/treestats/tests/testthat/test-branching_times.R | 9 treestats-1.71.13/treestats/tests/testthat/test-brlen.R | 1 treestats-1.71.13/treestats/tests/testthat/test-cherries.R | 37 treestats-1.71.13/treestats/tests/testthat/test-colless.R | 64 - treestats-1.71.13/treestats/tests/testthat/test-colless_corr.R | 27 treestats-1.71.13/treestats/tests/testthat/test-colless_quad.R | 27 treestats-1.71.13/treestats/tests/testthat/test-crown_age.R | 29 treestats-1.71.13/treestats/tests/testthat/test-diameter.R | 40 treestats-1.71.13/treestats/tests/testthat/test-double_cherries.R | 7 treestats-1.71.13/treestats/tests/testthat/test-eigen_centrality.R | 73 - treestats-1.71.13/treestats/tests/testthat/test-ew_colless.R | 23 treestats-1.71.13/treestats/tests/testthat/test-four_prong.R | 18 treestats-1.71.13/treestats/tests/testthat/test-gamma.R | 12 treestats-1.71.13/treestats/tests/testthat/test-imbal_steps.R | 6 treestats-1.71.13/treestats/tests/testthat/test-inv_branch_dist.R | 6 treestats-1.71.13/treestats/tests/testthat/test-j.R | 32 treestats-1.71.13/treestats/tests/testthat/test-j_one.R | 9 treestats-1.71.13/treestats/tests/testthat/test-max_betweenness.R | 43 treestats-1.71.13/treestats/tests/testthat/test-max_closeness.R | 55 treestats-1.71.13/treestats/tests/testthat/test-max_del_width.R | 27 treestats-1.71.13/treestats/tests/testthat/test-max_depth.R | 27 treestats-1.71.13/treestats/tests/testthat/test-max_ladder.R | 12 treestats-1.71.13/treestats/tests/testthat/test-max_width.R | 29 treestats-1.71.13/treestats/tests/testthat/test-mean_branch_length.R | 18 treestats-1.71.13/treestats/tests/testthat/test-mean_i.R | 40 treestats-1.71.13/treestats/tests/testthat/test-minmax_adj.R | 38 treestats-1.71.13/treestats/tests/testthat/test-minmax_laplace.R | 41 treestats-1.71.13/treestats/tests/testthat/test-mntd.R | 36 treestats-1.71.13/treestats/tests/testthat/test-mpd.R | 22 treestats-1.71.13/treestats/tests/testthat/test-mw_over_md.R | 25 treestats-1.71.13/treestats/tests/testthat/test-nltt.R | 9 treestats-1.71.13/treestats/tests/testthat/test-phylodiv.R | 13 treestats-1.71.13/treestats/tests/testthat/test-pigot_rho.R | 7 treestats-1.71.13/treestats/tests/testthat/test-pitchforks.R | 26 treestats-1.71.13/treestats/tests/testthat/test-polytomies.R | 128 +- treestats-1.71.13/treestats/tests/testthat/test-psv.R | 27 treestats-1.71.13/treestats/tests/testthat/test-rogers.R | 23 treestats-1.71.13/treestats/tests/testthat/test-root_imbalance.R | 10 treestats-1.71.13/treestats/tests/testthat/test-rpanda.R | 20 treestats-1.71.13/treestats/tests/testthat/test-rquartet.R | 30 treestats-1.71.13/treestats/tests/testthat/test-sackin.R | 48 treestats-1.71.13/treestats/tests/testthat/test-stairs.R | 52 treestats-1.71.13/treestats/tests/testthat/test-sym_nodes.R | 22 treestats-1.71.13/treestats/tests/testthat/test-tot_coph.R | 27 treestats-1.71.13/treestats/tests/testthat/test-tot_internal_path.R | 23 treestats-1.71.13/treestats/tests/testthat/test-tot_path.R | 24 treestats-1.71.13/treestats/tests/testthat/test-treeness.R | 7 treestats-1.71.13/treestats/tests/testthat/test-var-mpd.R | 25 treestats-1.71.13/treestats/tests/testthat/test-var_leaf_depth.R | 26 treestats-1.71.13/treestats/tests/testthat/test-wiener.R | 17 treestats-1.71.13/treestats/vignettes/Correlations.Rmd | 149 ++ treestats-1.71.13/treestats/vignettes/Tree_size.Rmd | 39 147 files changed, 3044 insertions(+), 1977 deletions(-)
Title: Access to the Global Inventory of Floras and Traits (GIFT)
Description: Retrieving regional plant checklists, species traits and
distributions, and environmental data from the Global Inventory of Floras and
Traits (GIFT). More information about the GIFT database can be found at
<https://gift.uni-goettingen.de/about> and the map of available floras can be
visualized at <https://gift.uni-goettingen.de/map>. The API and associated
queries can be accessed according the following scheme:
<https://gift.uni-goettingen.de/api/extended/index2.0.php?query=env_raster>.
Author: Pierre Denelle [aut, cre] ,
Patrick Weigelt [aut]
Maintainer: Pierre Denelle <pierre.denelle@posteo.com>
Diff between GIFT versions 1.3.3 dated 2024-12-19 and 1.3.4 dated 2026-08-24
DESCRIPTION | 17 MD5 | 23 NEWS.md | 8 R/GIFT_env_meta_misc.R | 12 R/GIFT_env_meta_raster.R | 10 R/GIFT_taxonomy.R | 2 build/vignette.rds |binary inst/doc/GIFT.R | 3 inst/doc/GIFT.Rmd | 14 inst/doc/GIFT.html | 858 ---------------- man/GIFT_taxonomy.Rd | 2 man/figures/GIFT_taxonomic_standardization_endemism.svg |only vignettes/GIFT.Rmd | 14 13 files changed, 106 insertions(+), 857 deletions(-)
Title: Bayes Factors for Informative Hypotheses
Description: Computes approximated adjusted fractional Bayes factors for
equality, inequality, and about equality constrained hypotheses.
For a tutorial on this method, see Hoijtink, Mulder, van Lissa, & Gu,
(2019) <doi:10.1037/met0000201>. For applications in structural equation
modeling, see: Van Lissa, Gu, Mulder, Rosseel, Van Zundert, &
Hoijtink, (2021) <doi:10.1080/10705511.2020.1745644>. For the statistical
underpinnings, see Gu, Mulder, and Hoijtink (2018) <doi:10.1111/bmsp.12110>;
Hoijtink, Gu, & Mulder, J. (2019) <doi:10.1111/bmsp.12145>; Hoijtink, Gu,
Mulder, & Rosseel, (2019) <doi:10.31234/osf.io/q6h5w>.
Author: Xin Gu [aut],
Herbert Hoijtink [aut],
Joris Mulder [aut],
Caspar J van Lissa [aut, cre],
Van Zundert Camiel [ctb],
Jeff Jones [ctb],
Niels Waller [ctb]
Maintainer: Caspar J van Lissa <c.j.vanlissa@tilburguniversity.edu>
Diff between bain versions 0.2.11 dated 2024-06-12 and 0.2.12 dated 2026-08-24
DESCRIPTION | 10 MD5 | 144 +++ NAMESPACE | 52 - R/bain_methods.R | 29 R/create_matrices.R | 89 +- R/get_estimates.R | 32 build/partial.rdb |binary build/vignette.rds |binary inst/doc/Introduction_to_bain.R | 1532 ++++++++++++++++++------------------ inst/doc/Introduction_to_bain.html | 7 man/kuiper2013.Rd | 112 +- man/pbf.Rd | 106 +- tests/testthat/_problems |only tests/testthat/test-baindefault.R | 5 tests/testthat/test-params_in_hyp.R |only tests/testthat/test-parser.R | 8 16 files changed, 1161 insertions(+), 965 deletions(-)
Title: Tidy Dataframes and Expressions with Statistical Details
Description: Utilities for producing dataframes with rich details for the
most common types of statistical approaches and tests: parametric,
nonparametric, robust, and Bayesian t-test, one-way ANOVA, correlation
analyses, contingency table analyses, and meta-analyses. The functions
are pipe-friendly and provide a consistent syntax to work with tidy
data. These dataframes additionally contain expressions with
statistical details, and can be used in graphing packages. This
package also forms the statistical processing backend for
'ggstatsplot'. References: Patil (2021) <doi:10.21105/joss.03236>.
Author: Indrajeet Patil [cre, aut, cph]
Maintainer: Indrajeet Patil <patilindrajeet.science@gmail.com>
Diff between statsExpressions versions 2.1.0 dated 2026-08-21 and 2.1.1 dated 2026-08-24
DESCRIPTION | 6 ++-- MD5 | 34 +++++++++++----------- NAMESPACE | 5 +-- NEWS.md | 4 ++ R/add-expression-col.R | 61 ++++++++++++++--------------------------- R/centrality-description.R | 2 - R/contingency-table.R | 29 ++++++++++++++----- R/corr-test.R | 2 - R/globals.R | 3 -- R/long-to-wide-converter.R | 21 ++++++++++---- R/one-sample-test.R | 26 +++-------------- R/oneway-anova.R | 2 - R/pairwise-comparisons.R | 25 ++++++---------- R/pairwise-contingency-table.R | 13 ++------ R/statsExpressions-package.R | 2 - R/switch-functions.R | 31 ++++++++++++++++++++ R/tidy-model-expressions.R | 13 +------- R/two-sample-test.R | 23 ++++----------- 18 files changed, 144 insertions(+), 158 deletions(-)
More information about statsExpressions at CRAN
Permanent link
Title: Spatial Component Analysis for Spatial Sequencing Data
Description: Spatial components offer tools for dimension reduction and
spatially variable gene detection for high dimensional spatial transcriptomics
data. Construction of a projection onto low-dimensional feature space of
spatially dependent metagenes offers pre-processing to clustering, testing for
spatial variability and denoising of spatial expression patterns. For more
details, see Koehler et al. (2026) <doi:10.1093/bioinformatics/btag052>.
Author: David Koehler [aut, cre]
Maintainer: David Koehler <koehler@imbie.uni-bonn.de>
Diff between SPACO versions 1.0.2 dated 2026-07-06 and 1.0.3 dated 2026-08-24
DESCRIPTION | 6 +++--- MD5 | 4 ++-- tests/testthat/test-SCA.R | 3 +++ 3 files changed, 8 insertions(+), 5 deletions(-)
Title: Extending 'mlr3' to Time Series Forecasting
Description: Extends the 'mlr3' package and ecosystem to time series
forecasting. Provides forecasting tasks, learners, resampling
strategies, performance measures, and 'mlr3pipelines' operators for
time-series feature engineering. Machine learning regression learners
can be turned into forecasters through recursive and direct multi-step
strategies.
Author: Maximilian Muecke [aut, cre] ,
Marc Becker [aut] ,
Bernd Bischl [aut]
Maintainer: Maximilian Muecke <muecke.maximilian@gmail.com>
Diff between mlr3forecast versions 0.1.0 dated 2026-07-22 and 0.2.0 dated 2026-08-24
mlr3forecast-0.1.0/mlr3forecast/man/mlr_pipeops_fcstavg.Rd |only mlr3forecast-0.2.0/mlr3forecast/DESCRIPTION | 43 - mlr3forecast-0.2.0/mlr3forecast/MD5 | 266 +++++----- mlr3forecast-0.2.0/mlr3forecast/NAMESPACE | 11 mlr3forecast-0.2.0/mlr3forecast/NEWS.md | 29 + mlr3forecast-0.2.0/mlr3forecast/R/DirectForecaster.R | 113 +++- mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcst.R | 4 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstAr.R |only mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstArfima.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstArima.R | 4 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstAutoAdam.R | 14 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstAutoArima.R | 9 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstAutoMsarima.R | 2 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstAutoSsarima.R | 2 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstBats.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstEts.R | 2 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstForecast.R | 9 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstGum.R | 1 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstMean.R | 4 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstMlp.R | 2 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstNnetar.R | 17 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstProphet.R | 10 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstRlgt.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstSma.R | 3 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstSmooth.R | 2 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstSparma.R |only mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstStlm.R | 13 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstTbats.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/LearnerFcstTslm.R | 9 mlr3forecast-0.2.0/mlr3forecast/R/MeasureACF1.R | 2 mlr3forecast-0.2.0/mlr3forecast/R/MeasureDirectional.R | 13 mlr3forecast-0.2.0/mlr3forecast/R/MeasureMSIS.R | 11 mlr3forecast-0.2.0/mlr3forecast/R/MeasureScaled.R | 18 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpFcstAvg.R | 31 - mlr3forecast-0.2.0/mlr3forecast/R/PipeOpFcstCatch22.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpFcstFeasts.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpFcstRolling.R | 2 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpFcstSplitKey.R | 8 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpFcstTsfeats.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpFcstUniteKey.R | 21 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpTargetTrafo.R | 3 mlr3forecast-0.2.0/mlr3forecast/R/PipeOpTargetTrafoBoxCox.R | 6 mlr3forecast-0.2.0/mlr3forecast/R/PredictionDataFcst.R | 45 + mlr3forecast-0.2.0/mlr3forecast/R/PredictionFcst.R | 57 +- mlr3forecast-0.2.0/mlr3forecast/R/RecursiveForecaster.R | 227 +++++++- mlr3forecast-0.2.0/mlr3forecast/R/ResamplingFcstHoldout.R | 4 mlr3forecast-0.2.0/mlr3forecast/R/TaskFcst.R | 41 + mlr3forecast-0.2.0/mlr3forecast/R/as_task_fcst.R | 12 mlr3forecast-0.2.0/mlr3forecast/R/assertions.R | 44 + mlr3forecast-0.2.0/mlr3forecast/R/autoplot.R | 12 mlr3forecast-0.2.0/mlr3forecast/R/forecast.R | 10 mlr3forecast-0.2.0/mlr3forecast/R/helper_freq.R | 12 mlr3forecast-0.2.0/mlr3forecast/R/helper_key.R | 10 mlr3forecast-0.2.0/mlr3forecast/R/partition.R | 1 mlr3forecast-0.2.0/mlr3forecast/R/pipeline_fcst_local.R | 7 mlr3forecast-0.2.0/mlr3forecast/R/tsf.R | 14 mlr3forecast-0.2.0/mlr3forecast/R/zzz.R | 8 mlr3forecast-0.2.0/mlr3forecast/README.md | 96 +-- mlr3forecast-0.2.0/mlr3forecast/man/DirectForecaster.Rd | 51 + mlr3forecast-0.2.0/mlr3forecast/man/LearnerFcst.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/PredictionFcst.Rd | 18 mlr3forecast-0.2.0/mlr3forecast/man/RecursiveForecaster.Rd | 71 ++ mlr3forecast-0.2.0/mlr3forecast/man/TaskFcst.Rd | 21 mlr3forecast-0.2.0/mlr3forecast/man/as_task_fcst.Rd | 9 mlr3forecast-0.2.0/mlr3forecast/man/figures/README-unnamed-chunk-4-1.png |only mlr3forecast-0.2.0/mlr3forecast/man/figures/README-unnamed-chunk-7-1.png |only mlr3forecast-0.2.0/mlr3forecast/man/figures/logo.png |only mlr3forecast-0.2.0/mlr3forecast/man/forecast.Learner.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr3forecast-package.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_graphs_fcst.local.Rd | 5 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.adam.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.ar.Rd |only mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.arfima.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.arima.Rd | 6 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.auto_adam.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.auto_arima.Rd | 5 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.auto_ces.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.auto_gum.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.auto_msarima.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.auto_ssarima.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.bagged.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.bats.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.ces.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.croston.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.elm.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.es.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.ets.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.gum.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.holt_winters.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.mean.Rd | 12 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.mlp.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.msarima.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.nnetar.Rd | 6 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.prophet.Rd | 6 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.random_walk.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.rlgt.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.sma.Rd | 3 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.sparma.Rd |only mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.spline.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.ssarima.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.stlm.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.struct_ts.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.tbats.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.theta.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.tscount.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_learners_fcst.tslm.Rd | 6 mlr3forecast-0.2.0/mlr3forecast/man/mlr_measures_fcst.mase.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_measures_fcst.mdpv.Rd | 2 mlr3forecast-0.2.0/mlr3forecast/man/mlr_measures_fcst.msis.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_measures_fcst.rmsse.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/mlr_pipeops_fcst.avg.Rd |only mlr3forecast-0.2.0/mlr3forecast/man/mlr_pipeops_fcst.unitekey.Rd | 9 mlr3forecast-0.2.0/mlr3forecast/man/mlr_tasks_livestock.Rd | 4 mlr3forecast-0.2.0/mlr3forecast/man/set_validate.RecursiveForecaster.Rd |only mlr3forecast-0.2.0/mlr3forecast/tests/testthat/_snaps/DirectForecaster.md | 10 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/_snaps/PipeOpFcstAvg.md | 2 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/_snaps/RecursiveForecaster.md | 8 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/helper.R | 117 ++++ mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_DirectForecaster.R | 81 +++ mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_PipeOpFcstAvg.R | 47 + mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_PipeOpFcstUniteKey.R | 15 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_PipeOpTargetTrafoBoxCox.R | 2 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_PredictionDataFcst.R | 108 ++++ mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_PredictionFcst.R | 37 + mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_RecursiveForecaster.R | 147 +++++ mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_TaskFcst.R | 84 +++ mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_as_task_fcst.R | 6 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_fcst_ar.R |only mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_fcst_nnetar.R | 27 + mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_fcst_prophet.R | 27 + mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_fcst_sma.R | 11 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_fcst_sparma.R |only mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_fcst_tslm.R | 10 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_forecast.R | 6 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_helper.R | 6 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_measures.R | 26 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_partition.R | 1 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_pipeline_fcst_local.R | 2 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_resampling_holdout.R | 13 mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_set_threads.R |only mlr3forecast-0.2.0/mlr3forecast/tests/testthat/test_zzz.R |only 141 files changed, 1916 insertions(+), 523 deletions(-)
Title: Double Constrained Correspondence Analysis for Trait-Environment
Analysis in Ecology
Description: Double constrained correspondence analysis (dc-CA) analyzes
(multi-)trait (multi-)environment ecological data by using the 'vegan'
package and native R code. Throughout the two step algorithm of ter Braak
et al. (2018) is used. This algorithm combines and extends community-
(sample-) and species-level analyses, i.e. the usual community weighted
means (CWM)-based regression analysis and the species-level analysis of
species-niche centroids (SNC)-based regression analysis. The two steps use
canonical correspondence analysis to regress the abundance data on to the
traits and (weighted) redundancy analysis to regress the CWM of the
orthonormalized traits on to the environmental predictors. The function
dc_CA() has an option to divide the abundance data of a site by the site
total, giving equal site weights. This division has the advantage that the
multivariate analysis corresponds with an unweighted (multi-trait)
community-level analysis, instead of being weighted. The first step of
the al [...truncated...]
Author: Cajo J.F ter Braak [aut] ,
Bart-Jan van Rossum [aut, cre]
Maintainer: Bart-Jan van Rossum <bart-jan.vanrossum@wur.nl>
Diff between douconca versions 1.2.5 dated 2026-02-23 and 1.2.5.1 dated 2026-08-24
DESCRIPTION | 10 +++--- MD5 | 28 ++++++++--------- NAMESPACE | 21 +++++++----- NEWS.md | 4 ++ R/ipfN2marginals.R | 2 - R/plot.dcCA.R | 4 +- R/reexport.R | 3 + README.md | 5 +-- build/partial.rdb |binary build/vignette.rds |binary inst/doc/douconca.html | 75 +++++++++++++++++++++++----------------------- inst/tinytest/test_cca0.R | 9 +++-- inst/tinytest/test_wrda.R | 19 ++++------- man/douconca-package.Rd | 1 man/reexports.Rd | 2 - 15 files changed, 97 insertions(+), 86 deletions(-)
More information about CompositionalMPT at CRAN
Permanent link
Title: Regression-Enhanced Random Forests
Description: A novel generalized Random Forest method, that can improve on
RFs by borrowing the strength of penalized parametric regression. Based on
Zhang et al. (2019) <doi:10.48550/arXiv.1904.10416>.
Author: Umberto Minora [aut, cre, cph]
Maintainer: Umberto Minora <umbertofilippo@tiscali.it>
Diff between RegEnRF versions 1.0.0 dated 2025-12-22 and 2.0.1 dated 2026-08-24
DESCRIPTION | 10 ++-- MD5 | 13 +++--- NEWS.md | 16 ++++++- R/RegEnRF.R | 12 +++-- README.md | 4 - inst/CITATION | 33 +++++++++++---- man/RegEnRF.Rd | 109 +++++++++++++++++++++++++-------------------------- man/figures/logo.png |only 8 files changed, 113 insertions(+), 84 deletions(-)
Title: Fitting Interpretable Neural Additive Models Using
Orthogonalization
Description: An algorithm for fitting interpretable additive neural
networks for identifiable and visualizable feature effects using post
hoc orthogonalization. Fit custom neural networks intuitively using
established 'R' 'formula' notation, including interaction effects of
arbitrary order while preserving identifiability to enable a
functional decomposition of the prediction function. For more details see
Koehler et al. (2025) <doi:10.1038/s44387-025-00033-7>.
Author: David Koehler [aut, cre]
Maintainer: David Koehler <koehler@imbie.uni-bonn.de>
Diff between ONAM versions 1.0.1 dated 2026-01-26 and 1.1.0 dated 2026-08-24
DESCRIPTION | 8 - MD5 | 40 ++++--- NAMESPACE | 7 + R/evaluation.R | 13 -- R/input_checks.R | 51 ++++++--- R/model_architecture.R |only R/model_setup.R | 195 +++++++++++++++++++---------------- R/onam.R | 100 ++++++++++-------- R/orthogonalization.R | 11 -- R/persistence.R |only R/var_decomposition.R | 207 +++++++++++++++++++++++++++++++++++--- R/visualization.R | 175 +++++++++++++++++++++++--------- build |only man/build_dnn.Rd |only man/decompose.Rd | 3 man/gen_sobol.Rd |only man/load_onam.Rd |only man/onam.Rd | 16 ++ man/plot.gen_sobol.Rd |only man/plot.var_decomp.Rd |only man/plot_inter_effect.Rd | 11 +- man/plot_main_effect.Rd | 10 + man/save_onam.Rd |only tests/testthat/test-inputs.R |only tests/testthat/test-onam.R | 180 +++++++++++++++++---------------- tests/testthat/test-persistence.R |only tests/testthat/test-utils.R |only 27 files changed, 693 insertions(+), 334 deletions(-)
Title: Access Live Sports Odds from the Odds API
Description: A utility to quickly obtain clean and tidy sports odds from
The Odds API <https://the-odds-api.com>. Provides wrappers for every
version 4 endpoint -- featured-market and single-event odds (including
player props and alternate lines), historical odds snapshots, scores,
events, participants, and usage-quota reporting -- returning tidy
tibbles ready for analysis.
Author: Saiem Gilani [aut, cre, cph]
Maintainer: Saiem Gilani <saiem.gilani@gmail.com>
Diff between oddsapiR versions 0.0.3 dated 2023-03-19 and 1.0.0 dated 2026-08-24
DESCRIPTION | 41 + LICENSE | 2 MD5 | 71 ++- NAMESPACE | 45 + NEWS.md | 94 +++- R/toa_api_key.R | 107 ++-- R/toa_event_markets.R |only R/toa_event_odds.R | 309 ++++++------- R/toa_event_odds_history.R |only R/toa_requests.R | 108 ++-- R/toa_sports.R | 124 ++--- R/toa_sports_events.R |only R/toa_sports_events_history.R |only R/toa_sports_odds.R | 222 ++++----- R/toa_sports_odds_history.R | 274 ++++++----- R/toa_sports_participants.R |only R/toa_sports_scores.R | 154 +++--- R/utils.R | 555 +++++++++++++++--------- README.md | 291 +++++++----- man/register_toa.Rd | 105 ++-- man/toa_api_call.Rd |only man/toa_api_headers.Rd |only man/toa_api_request.Rd |only man/toa_event_markets.Rd |only man/toa_event_odds.Rd | 185 +++----- man/toa_event_odds_history.Rd |only man/toa_quota.Rd |only man/toa_requests.Rd | 64 +- man/toa_sports.Rd | 86 ++- man/toa_sports_events.Rd |only man/toa_sports_events_history.Rd |only man/toa_sports_odds.Rd | 179 ++++--- man/toa_sports_odds_history.Rd | 153 +++--- man/toa_sports_participants.Rd |only man/toa_sports_scores.Rd | 117 ++--- tests/testthat/test-empty-bookmakers.R |only tests/testthat/test-toa_event_markets.R |only tests/testthat/test-toa_event_odds.R |only tests/testthat/test-toa_event_odds_history.R |only tests/testthat/test-toa_quota.R |only tests/testthat/test-toa_requests.R | 32 - tests/testthat/test-toa_sports.R | 41 - tests/testthat/test-toa_sports_events.R |only tests/testthat/test-toa_sports_events_history.R |only tests/testthat/test-toa_sports_odds.R | 66 +- tests/testthat/test-toa_sports_odds_history.R |only tests/testthat/test-toa_sports_participants.R |only tests/testthat/test-toa_sports_scores.R | 52 +- 48 files changed, 1923 insertions(+), 1554 deletions(-)
Title: One- And Two-Sample Hausdorff Goodness-of-Fit Test
Description: Computes the test statistic and p-values of the one-sample and two-sample Hausdorff (H) goodness-of-fit tests. The H statistic measures the Hausdorff distance under the Chebyshev (l-infinity) metric, between the two cumulative distribution functions (cdfs) underlying the corresponding one-sample and two-sample null hypothesis. It coincides to the side length of the largest axis-aligned square (hypercube) that can be inscribed between the two cdfs. The following cases are covered: (i) one-sample, univariate; (ii) two-sample univariate; and (iii) two-sample bivariate. Exact one-sample p-values are computed in O(n^2 log n) time via the 'Exact-KS-FFT' method of Dimitrova, Kaishev, and Tan (2020) <doi:10.18637/jss.v095.i10>; two-sample p-values are obtained by permutation. A key advantage of the H test is that its sensitivity can be directed towards the left tail, body, or right tail of the distribution by tuning a scale parameter sigma, and therefore maximizing its power which as sh [...truncated...]
Author: Dimitrina S. Dimitrova [aut],
Yun Jia [aut, cre],
Vladimir K. Kaishev [aut]
Maintainer: Yun Jia <yunjia2019@gmail.com>
Diff between HausdorffGoF versions 0.3.0 dated 2026-05-15 and 0.3.1 dated 2026-08-24
DESCRIPTION | 8 - MD5 | 18 +-- NAMESPACE | 3 R/Hausdorff.onesample.R | 17 --- inst/COPYRIGHTS | 54 ++++----- man/H_stat_1s_1d.Rd | 166 +++++++++++++++--------------- man/H_test_1s_1d.Rd | 136 ++++++++++++------------ man/H_test_c_cdf.Rd | 242 +++++++++++++++++++++----------------------- man/HausdorffGoF-package.Rd | 8 - man/Hausdorff_stat.Rd | 216 +++++++++++++++++++-------------------- 10 files changed, 427 insertions(+), 441 deletions(-)
Title: General Recognition Theory
Description: Functions to generate and analyze data for psychology experiments based on the General Recognition Theory.
Author: Kazunaga Matsuki [aut],
Andy Wills [cre]
Maintainer: Andy Wills <andy@willslab.co.uk>
Diff between grt versions 0.2.1 dated 2017-07-14 and 0.2.2 dated 2026-08-24
DESCRIPTION | 20 ++++++++++++++------ MD5 | 12 ++++++------ man/qdb.p.correct.Rd | 4 ++-- man/subjdemo_1d.Rd | 4 +--- man/subjdemo_2d.Rd | 4 +--- man/subjdemo_3d.Rd | 4 +--- man/subjdemo_cj.Rd | 4 +--- 7 files changed, 26 insertions(+), 26 deletions(-)
Title: Efficient Neighborhood Basal Area Metrics for Trees
Description: Fast 'C++'-backed tools for computing conspecific and total neighborhood basal area in mapped forest plots. Includes unweighted and distance-weighted neighborhoods, multiple radii, decay kernels, and basic edge correction. Outputs are model-ready covariates for forest competition, growth, and survival models, following neighborhood modeling workflows commonly used in spatial ecology (e.g., Hülsmann et al. 2024 <doi:10.1038/s41586-024-07118-4>).
Author: Masatoshi Katabuchi [aut, cre]
Maintainer: Masatoshi Katabuchi <mattocci27@gmail.com>
Diff between calba versions 0.1.2 dated 2025-12-18 and 0.1.3 dated 2026-08-24
DESCRIPTION | 6 +- MD5 | 37 +++++++------- NAMESPACE | 1 NEWS.md |only R/RcppExports.R | 20 +++---- R/calba.R | 112 ++++++++++++++++++++++++++++++++++++------- R/utils.R | 5 + build/vignette.rds |binary inst/doc/calba.html | 2 man/ba_decay.Rd | 6 +- man/ba_decay_long.Rd | 5 + man/ba_simple.Rd | 7 ++ man/count_con.Rd | 13 ++++ man/count_total.Rd | 12 ++++ man/duplicate_coordinates.Rd |only man/figures |only man/neigh_ba.Rd | 5 + man/neigh_multi_r.Rd | 6 +- src/RcppExports.cpp | 45 +++++++++-------- src/calba.cpp | 73 +++++++++++++++++++++++----- tests/testthat/test-calba.R | 110 ++++++++++++++++++++++++++++++++++++++++-- 21 files changed, 374 insertions(+), 91 deletions(-)
Title: 'tidyverse' Methods and 'ggplot2' Helpers for 'terra' Objects
Description: Provides methods from 'tidyverse' packages for 'SpatRaster'
and 'SpatVector' objects created with 'terra', plus 'ggplot2' 'geoms'
and scales for plotting those objects. It is designed to let users
manipulate spatial data with familiar 'dplyr' and 'tidyr' verbs before
visualizing results with 'ggplot2'.
Author: Diego Hernangomez [aut, cre, cph] ,
Dewey Dunnington [ctb] ,
ggplot2 authors [cph] ,
Andrea Manica [ctb]
Maintainer: Diego Hernangomez <diego.hernangomezherrero@gmail.com>
Diff between tidyterra versions 1.2.0 dated 2026-06-17 and 1.3.0 dated 2026-08-24
tidyterra-1.2.0/tidyterra/inst/doc/welcome.html |only tidyterra-1.2.0/tidyterra/inst/doc/welcome.qmd |only tidyterra-1.2.0/tidyterra/vignettes/fig-ex1-1.png |only tidyterra-1.2.0/tidyterra/vignettes/fig-ex2-1.png |only tidyterra-1.2.0/tidyterra/vignettes/paper.bib |only tidyterra-1.2.0/tidyterra/vignettes/welcome.qmd |only tidyterra-1.3.0/tidyterra/DESCRIPTION | 20 tidyterra-1.3.0/tidyterra/LICENSE | 2 tidyterra-1.3.0/tidyterra/MD5 | 440 ++--- tidyterra-1.3.0/tidyterra/NAMESPACE | 202 +- tidyterra-1.3.0/tidyterra/NEWS.md | 42 tidyterra-1.3.0/tidyterra/R/arrange-SpatVector.R | 16 tidyterra-1.3.0/tidyterra/R/as-coordinates.R | 25 tidyterra-1.3.0/tidyterra/R/as-sf.R | 22 tidyterra-1.3.0/tidyterra/R/as-spatraster.R | 43 tidyterra-1.3.0/tidyterra/R/as-spatvector.R | 42 tidyterra-1.3.0/tidyterra/R/as-tibble-Spat.R | 21 tidyterra-1.3.0/tidyterra/R/autoplot-Spat.R | 36 tidyterra-1.3.0/tidyterra/R/bind-cols-SpatVector.R | 21 tidyterra-1.3.0/tidyterra/R/bind-rows-SpatVector.R | 43 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Title: Preprocessing and Feature Engineering Steps for Modeling
Description: A recipe prepares your data for modeling. We provide an
extensible framework for pipeable sequences of feature engineering
steps provides preprocessing tools to be applied to data. Statistical
parameters for the steps can be estimated from an initial data set and
then applied to other data sets. The resulting processed output can
then be used as inputs for statistical or machine learning models.
Author: Max Kuhn [aut, cre],
Hadley Wickham [aut],
Emil Hvitfeldt [aut],
Posit Software, PBC [cph, fnd]
Maintainer: Max Kuhn <max@posit.co>
Diff between recipes versions 1.3.3 dated 2026-05-30 and 1.4.0 dated 2026-08-24
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Title: Models and Diagnostics for Rasch Measurement Theory
Description: Fits models within Rasch Measurement Theory, whose defining
properties include sufficiency and invariance (Rasch, 1960
<ISBN:9780226705538>; Andrich and Marais, 2019
<doi:10.1007/978-981-13-7496-8>). Models include the dichotomous Rasch,
partial credit, rating scale, explanatory, many-facet and extended frame
of reference models. Explanatory models include the linear logistic test
model (Fischer, 1973 <doi:10.1016/0001-6918(73)90003-6>) and linear partial
credit model (Fischer and Ponocny, 1994 <doi:10.1007/BF02295182>).
Comparative judgement models, including explanatory object models, are
available for dichotomous
(Andrich, 1978 <doi:10.1177/014662167800200319>) and ordered pairwise
responses (Tutz, 1986 <doi:10.1016/0022-2496(86)90034-9>). Item
parameters for item-response models are estimated by pairwise conditional
maximum likelihood (Zwinderman, 1995
<doi:10.1177/014662169501900406>), comparative judgement parameters by
maximum likelihood [...truncated...]
Author: Josh McGrane [aut, cre]
Maintainer: Josh McGrane <drjoshmcgrane@gmail.com>
Diff between rasch versions 1.11.7 dated 2026-07-30 and 1.12.0 dated 2026-08-24
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Title: Fast Random Number Generation with Multiple Engines and
Distributions
Description: Random number generation library implemented in C with multiple
engines and distribution functions, providing an R interface focused on
correctness, speed, and reproducibility. Supports various PRNGs including
xoshiro256++/**, PCG64, Philox, and ChaCha20, with methods for continuous,
discrete, and multivariate distributions.
Author: Kristjan Jonasson [aut, cre]
Maintainer: Kristjan Jonasson <jonasson@hi.is>
Diff between randompack versions 0.1.3 dated 2026-04-22 and 0.1.10 dated 2026-08-24
DESCRIPTION | 6 ++-- MD5 | 43 +++++++++++++++-------------- README.md | 2 - inst/THIRD-PARTY-NOTICES | 10 +++--- inst/examples/ThreadJump.R |only inst/include |only src/BlasGateway.h | 2 - src/avx2.c | 59 ---------------------------------------- src/avx512.c | 45 ------------------------------ src/buffer_draw.inc | 2 - src/chachacha.inc | 10 +++--- src/distributions.inc | 59 ++++++++++++++++++++-------------------- src/init.c | 11 +++++++ src/norm_exp.inc | 11 ++++++- src/openlibm.inc | 22 +++++++-------- src/randompack.c | 2 - src/randompack.h | 11 ++++++- src/randompack_R.c | 13 +++++++- src/randompack_internal.h | 4 -- src/randutil.inc | 2 - src/ranluxpp.inc | 6 ++-- src/sleef.c | 66 ++++++++++++++++++++++----------------------- src/sleef_arm.c | 6 +++- 23 files changed, 162 insertions(+), 230 deletions(-)
Title: Convenient Access to NYS Open Data API Endpoints
Description: Provides helper functions to access datasets from the
NYS Open Data platform <https://data.ny.gov/>. Functions return
results as tidy tibbles and support optional filtering, sorting,
and row limits via the Socrata API.
Author: Christian Martinez [aut, cre]
Maintainer: Christian Martinez <c.martinez0@outlook.com>
This is a re-admission after prior archival of version 0.1.1 dated 2026-04-01
Diff between nysOpenData versions 0.1.1 dated 2026-04-01 and 0.1.3 dated 2026-08-24
DESCRIPTION | 6 LICENSE | 2 MD5 | 37 +-- R/nys_any_dataset.R | 77 +++++-- R/nys_list_datasets.R | 43 +++- R/nys_pull_dataset.R | 169 ++++++++++++---- R/utils_request.R | 15 - README.md | 19 + inst/doc/getting-started.R | 86 ++++---- inst/doc/getting-started.Rmd | 20 + inst/doc/getting-started.html | 60 ----- man/nys_any_dataset.Rd | 57 ++++- man/nys_list_datasets.Rd | 42 +++ man/nys_pull_dataset.Rd | 128 +++++++++--- tests/testthat/fixtures/nys_pull_dataset_key_lookup.yml |only tests/testthat/fixtures/nys_pull_dataset_robust.yml |only tests/testthat/fixtures/nys_pull_dataset_toggles.yml |only tests/testthat/test-nys_any_dataset.R | 21 + tests/testthat/test-nys_catalog_and_pull_dataset.R | 19 - tests/testthat/test-utils_request.R | 10 vignettes/getting-started.Rmd | 20 + 21 files changed, 567 insertions(+), 264 deletions(-)
Title: Dynamic Multi-Species Size Spectrum Modelling
Description: A set of classes and methods to set up and run multi-species, trait
based and community size spectrum ecological models, focused on the marine
environment.
Author: Gustav Delius [cre, aut, cph] ,
Finlay Scott [aut, cph],
Julia Blanchard [aut, cph] ,
Ken Andersen [aut, cph] ,
Richard Southwell [ctb, cph]
Maintainer: Gustav Delius <gustav.delius@york.ac.uk>
Diff between mizer versions 3.2.1 dated 2026-08-04 and 3.3.0 dated 2026-08-24
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mizer-3.2.1/mizer/tests/testthat/test-extension-dispatch.R |only mizer-3.2.1/mizer/tests/testthat/test-extension-versions.R |only mizer-3.2.1/mizer/tests/testthat/test-flux_limiter.R |only mizer-3.2.1/mizer/tests/testthat/test-getFlux.R |only mizer-3.2.1/mizer/tests/testthat/test-get_steady_state_n.R |only mizer-3.2.1/mizer/tests/testthat/test-helpers-plot.R |only mizer-3.2.1/mizer/tests/testthat/test-idxFinalT.R |only mizer-3.2.1/mizer/tests/testthat/test-io.R |only mizer-3.2.1/mizer/tests/testthat/test-plotBiomass-cutoff.R |only mizer-3.2.1/mizer/tests/testthat/test-project-time-resampling.R |only mizer-3.2.1/mizer/tests/testthat/test-project_simple.R |only mizer-3.2.1/mizer/tests/testthat/test-tr_bdf2.R |only mizer-3.3.0/mizer/DESCRIPTION | 54 mizer-3.3.0/mizer/MD5 | 678 ++-- mizer-3.3.0/mizer/NAMESPACE | 119 mizer-3.3.0/mizer/NEWS.md | 1071 ++++++ mizer-3.3.0/mizer/R/ArrayResourceBySize-class.R | 420 ++ mizer-3.3.0/mizer/R/ArraySpeciesBySize-class.R | 533 ++- 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mizer-3.3.0/mizer/R/newMultispeciesParams.R | 266 + mizer-3.3.0/mizer/R/newSingleSpeciesParams.R | 35 mizer-3.3.0/mizer/R/observations.R |only mizer-3.3.0/mizer/R/plotBiomassObservedVsModel.R | 27 mizer-3.3.0/mizer/R/plotYieldObservedVsModel.R | 207 + mizer-3.3.0/mizer/R/plotYieldVsF.R |only mizer-3.3.0/mizer/R/plots.R | 1628 +++++++--- mizer-3.3.0/mizer/R/pred_kernel_funcs.R | 104 mizer-3.3.0/mizer/R/project.R | 41 mizer-3.3.0/mizer/R/project_n.R | 12 mizer-3.3.0/mizer/R/rate_functions.R | 397 -- mizer-3.3.0/mizer/R/registerExtensions.R | 24 mizer-3.3.0/mizer/R/reproduction.R | 2 mizer-3.3.0/mizer/R/resource_dynamics.R | 93 mizer-3.3.0/mizer/R/saveParams.R | 4 mizer-3.3.0/mizer/R/scanModel.R |only mizer-3.3.0/mizer/R/scan_setters.R |only mizer-3.3.0/mizer/R/second_order_w.R | 64 mizer-3.3.0/mizer/R/selectivity_funcs.R | 41 mizer-3.3.0/mizer/R/setBevertonHolt.R | 84 mizer-3.3.0/mizer/R/setExtDiffusion.R | 7 mizer-3.3.0/mizer/R/setExtEncounter.R | 22 mizer-3.3.0/mizer/R/setExtMort.R | 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mizer-3.3.0/mizer/man/with_info_level.Rd |only mizer-3.3.0/mizer/src/RcppExports.cpp | 8 mizer-3.3.0/mizer/src/inner_project_loop.cpp | 6 mizer-3.3.0/mizer/src/project_n_loop.cpp | 4 mizer-3.3.0/mizer/tests/testthat/Rplots.pdf |only mizer-3.3.0/mizer/tests/testthat/_snaps/diffusion.md |only mizer-3.3.0/mizer/tests/testthat/_snaps/plotYieldObservedVsModel/plotyieldobservedvsmodel.svg | 58 mizer-3.3.0/mizer/tests/testthat/_snaps/rate_functions.md |only mizer-3.3.0/mizer/tests/testthat/_snaps/steadyState.md |only mizer-3.3.0/mizer/tests/testthat/helper.R | 93 mizer-3.3.0/mizer/tests/testthat/test-ArrayResourceBySize-class.R |only mizer-3.3.0/mizer/tests/testthat/test-ArraySpeciesBySize-class.R |only mizer-3.3.0/mizer/tests/testthat/test-ArrayTimeBySpecies-class.R |only mizer-3.3.0/mizer/tests/testthat/test-ArrayTimeBySpeciesBySize-class.R |only mizer-3.3.0/mizer/tests/testthat/test-MizerParams-class.R | 100 mizer-3.3.0/mizer/tests/testthat/test-MizerScan-class.R |only mizer-3.3.0/mizer/tests/testthat/test-MizerSim-class.R | 35 mizer-3.3.0/mizer/tests/testthat/test-animateSpectra.R | 93 mizer-3.3.0/mizer/tests/testthat/test-background.R |only mizer-3.3.0/mizer/tests/testthat/test-backwards_compatibility.R | 158 mizer-3.3.0/mizer/tests/testthat/test-calibrate.R | 20 mizer-3.3.0/mizer/tests/testthat/test-compareParams.R | 22 mizer-3.3.0/mizer/tests/testthat/test-diffusion.R | 42 mizer-3.3.0/mizer/tests/testthat/test-extension.R | 5 mizer-3.3.0/mizer/tests/testthat/test-generic_methods.R |only mizer-3.3.0/mizer/tests/testthat/test-getOscillationModeSim.R |only mizer-3.3.0/mizer/tests/testthat/test-getSteadyResidual.R |only mizer-3.3.0/mizer/tests/testthat/test-helpers.R | 130 mizer-3.3.0/mizer/tests/testthat/test-indicator_functions.R | 16 mizer-3.3.0/mizer/tests/testthat/test-info_signals.R |only mizer-3.3.0/mizer/tests/testthat/test-manipulate_species.R | 22 mizer-3.3.0/mizer/tests/testthat/test-match.R | 52 mizer-3.3.0/mizer/tests/testthat/test-matchGrowth.R | 5 mizer-3.3.0/mizer/tests/testthat/test-newMultispeciesParams.R | 122 mizer-3.3.0/mizer/tests/testthat/test-newSingleSpeciesParams.R | 4 mizer-3.3.0/mizer/tests/testthat/test-numerical_methods.R |only mizer-3.3.0/mizer/tests/testthat/test-observations.R |only mizer-3.3.0/mizer/tests/testthat/test-plotBiomassObservedVsModel.R | 18 mizer-3.3.0/mizer/tests/testthat/test-plotYieldObservedVsModel.R | 158 mizer-3.3.0/mizer/tests/testthat/test-plotYieldVsF.R |only mizer-3.3.0/mizer/tests/testthat/test-plots.R | 983 +++++- mizer-3.3.0/mizer/tests/testthat/test-pred_kernel_funcs.R | 51 mizer-3.3.0/mizer/tests/testthat/test-project.R | 199 + mizer-3.3.0/mizer/tests/testthat/test-project_methods.R | 796 ---- mizer-3.3.0/mizer/tests/testthat/test-project_n.R | 157 mizer-3.3.0/mizer/tests/testthat/test-rate_functions.R | 984 +++++- mizer-3.3.0/mizer/tests/testthat/test-registerExtensions.R | 336 ++ mizer-3.3.0/mizer/tests/testthat/test-reproduction.R | 2 mizer-3.3.0/mizer/tests/testthat/test-resource_dynamics.R | 46 mizer-3.3.0/mizer/tests/testthat/test-saveParams.R |only mizer-3.3.0/mizer/tests/testthat/test-scanModel.R |only mizer-3.3.0/mizer/tests/testthat/test-scan_setters.R |only mizer-3.3.0/mizer/tests/testthat/test-second_order_summary.R | 143 mizer-3.3.0/mizer/tests/testthat/test-selectivity_funcs.R | 12 mizer-3.3.0/mizer/tests/testthat/test-setBevertonHolt.R | 46 mizer-3.3.0/mizer/tests/testthat/test-setExtEncounter.R | 8 mizer-3.3.0/mizer/tests/testthat/test-setExtMort.R | 71 mizer-3.3.0/mizer/tests/testthat/test-setFishing.R | 131 mizer-3.3.0/mizer/tests/testthat/test-setInteraction.R | 5 mizer-3.3.0/mizer/tests/testthat/test-setMaxIntakeRate.R | 12 mizer-3.3.0/mizer/tests/testthat/test-setMetabolicRate.R | 10 mizer-3.3.0/mizer/tests/testthat/test-setPredKernel.R | 57 mizer-3.3.0/mizer/tests/testthat/test-setReproduction.R | 26 mizer-3.3.0/mizer/tests/testthat/test-setResource.R | 81 mizer-3.3.0/mizer/tests/testthat/test-setSearchVolume.R | 12 mizer-3.3.0/mizer/tests/testthat/test-sim_rates.R |only mizer-3.3.0/mizer/tests/testthat/test-single_species.R | 48 mizer-3.3.0/mizer/tests/testthat/test-sizeIntegral.R |only mizer-3.3.0/mizer/tests/testthat/test-species_params.R | 547 +++ mizer-3.3.0/mizer/tests/testthat/test-steady.R | 447 +- mizer-3.3.0/mizer/tests/testthat/test-steadyNewton.R |only mizer-3.3.0/mizer/tests/testthat/test-steadySingleSpecies.R | 4 mizer-3.3.0/mizer/tests/testthat/test-steadyState.R |only mizer-3.3.0/mizer/tests/testthat/test-summary_methods.R | 17 mizer-3.3.0/mizer/tests/testthat/test-transport.R | 149 mizer-3.3.0/mizer/tests/testthat/test-wrapper_functions.R | 4 413 files changed, 14009 insertions(+), 4808 deletions(-)
Title: Meta Fuzzy Functions
Description: Implements Meta Fuzzy Functions (MFFs) for regression Tak and Ucan (2026) <doi:10.1016/j.asoc.2026.114592> by aggregating predictions from multiple base learners using membership weights learned in the prediction space of validation set. The package supports fuzzy and crisp meta-ensemble structures via Fuzzy C-Means (FCM) Tak (2018) <doi:10.1016/j.asoc.2018.08.009>, Possibilistic FCM (PFCM) Tak (2021) <doi:10.1016/j.ins.2021.01.024>, Gustafson–Kessel (GK) clustering, and k-means, and provides a workflow to (i) generate validation/test prediction matrices from common regression learners (linear and penalized regression via 'glmnet', random forests, gradient boosting with 'xgboost' and 'lightgbm'), (ii) fit cluster-wise meta fuzzy functions and compute membership-based weights, (iii) tune clustering-related hyperparameters (number of clusters/functions, fuzziness exponent, possibilistic regularization) via grid search on validation loss, and (iv) predict on new/test pre [...truncated...]
Author: Nihat Tak [aut, cre],
Sadik Coban [aut]
Maintainer: Nihat Tak <nihattak@gmail.com>
Diff between MFF versions 0.2.0 dated 2026-04-01 and 0.2.3 dated 2026-08-24
DESCRIPTION | 10 ++++++---- MD5 | 48 +++++++++++++++++++++++++++++++++--------------- NAMESPACE | 4 ++++ NEWS.md |only R/MFF-package.R | 7 +++++-- R/boot.train.R | 2 +- R/methods-mff.R |only R/mff.R | 24 +++++++++++++----------- R/model.train.R | 45 +++++++++++++++++++++++++++++++-------------- R/predict.mff.R | 21 ++++++++++++++++----- R/tune.mff.R | 20 +++++++++++++++----- build/partial.rdb |binary build/vignette.rds |only inst |only man/MFF-package.Rd | 21 ++++++++++++--------- man/boot.train.Rd | 12 ++++++------ man/mff.Rd | 30 ++++++++++++++++-------------- man/model.train.Rd | 19 +++++++++++-------- man/plot.mff.Rd |only man/predict.mff.Rd | 37 ++++++++++++++++++++++++------------- man/print.mff.Rd |only man/summary.mff.Rd |only man/tune.mff.Rd | 38 ++++++++++++++++++++++++-------------- tests |only vignettes |only 25 files changed, 217 insertions(+), 121 deletions(-)
Title: Likelihood Ratio Tests and Confidence Intervals
Description: A collection of hypothesis tests and confidence intervals based on the likelihood ratio
<https://en.wikipedia.org/wiki/Likelihood-ratio_test>.
Author: Greg McMahan [aut, cre]
Maintainer: Greg McMahan <gmcmacran@gmail.com>
Diff between LRTesteR versions 1.3.1 dated 2026-02-07 and 2.0.0 dated 2026-08-24
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LRTesteR-2.0.0/LRTesteR/R/empirical_quantile_tests.R | 45 - LRTesteR-2.0.0/LRTesteR/R/empirical_variance_tests.R |only LRTesteR-2.0.0/LRTesteR/R/exponential_tests.R | 40 - LRTesteR-2.0.0/LRTesteR/R/gamma_tests.R | 290 ++++---- LRTesteR-2.0.0/LRTesteR/R/gaussian_tests.R | 82 +- LRTesteR-2.0.0/LRTesteR/R/inverse_gaussian_tests.R | 240 +++--- LRTesteR-2.0.0/LRTesteR/R/log_normal.R | 51 - LRTesteR-2.0.0/LRTesteR/R/negative_binomial_tests.R | 60 - LRTesteR-2.0.0/LRTesteR/R/poisson_tests.R | 26 LRTesteR-2.0.0/LRTesteR/R/print.R | 5 LRTesteR-2.0.0/LRTesteR/README.md | 66 + LRTesteR-2.0.0/LRTesteR/build/vignette.rds |binary LRTesteR-2.0.0/LRTesteR/inst/doc/Analysis_of_Deviance.R | 13 LRTesteR-2.0.0/LRTesteR/inst/doc/Analysis_of_Deviance.Rmd | 48 - LRTesteR-2.0.0/LRTesteR/inst/doc/Analysis_of_Deviance.html | 104 +- LRTesteR-2.0.0/LRTesteR/inst/doc/Nonparametric_Tests.R | 72 +- LRTesteR-2.0.0/LRTesteR/inst/doc/Nonparametric_Tests.Rmd | 131 ++- LRTesteR-2.0.0/LRTesteR/inst/doc/Nonparametric_Tests.html | 234 ++++-- LRTesteR-2.0.0/LRTesteR/man/beta_shape1_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/beta_shape1_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/beta_shape2_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/beta_shape2_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/binomial_prob_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/binomial_prob_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/cauchy_location_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/cauchy_location_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/cauchy_scale_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/cauchy_scale_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/empirical_mu_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/empirical_mu_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/empirical_quantile_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/empirical_quantile_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/empirical_variance_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/empirical_variance_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/exponential_rate_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/exponential_rate_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gamma_rate_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gamma_rate_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gamma_scale_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gamma_scale_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gamma_shape_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gamma_shape_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gaussian_mu_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gaussian_mu_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gaussian_variance_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/gaussian_variance_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/inverse_gaussian_dispersion_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/inverse_gaussian_dispersion_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/inverse_gaussian_mu_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/inverse_gaussian_mu_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/inverse_gaussian_shape_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/inverse_gaussian_shape_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/log_normal_mu_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/log_normal_mu_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/log_normal_variance_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/log_normal_variance_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/negative_binomial_prob_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/negative_binomial_prob_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/poisson_lambda_one_way_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/poisson_lambda_test.Rd |only LRTesteR-2.0.0/LRTesteR/man/print.lrtest.Rd | 7 LRTesteR-2.0.0/LRTesteR/tests/testthat/test_a_function_factories_case_one.R | 27 LRTesteR-2.0.0/LRTesteR/tests/testthat/test_a_function_factories_case_two.R | 69 - LRTesteR-2.0.0/LRTesteR/tests/testthat/test_beta_tests.R | 226 ++++-- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_binomial_tests.R | 119 +-- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_cauchy_tests.R | 224 ++++-- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_empirical_helpers.R |only LRTesteR-2.0.0/LRTesteR/tests/testthat/test_empirical_mu_tests.R | 86 +- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_empirical_quantile_tests.R | 92 +- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_empirical_variance_tests.R |only LRTesteR-2.0.0/LRTesteR/tests/testthat/test_exponential_tests.R | 74 +- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_gamma_tests.R | 350 ++++++---- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_gaussian_tests.R | 171 ++-- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_inverse_gaussian.R | 329 ++++++--- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_log_normal_tests.R | 154 ++-- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_negative_binomial_tests.R | 103 +- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_poisson_tests.R | 74 +- LRTesteR-2.0.0/LRTesteR/tests/testthat/test_print.R | 12 LRTesteR-2.0.0/LRTesteR/vignettes/Analysis_of_Deviance.Rmd | 48 - LRTesteR-2.0.0/LRTesteR/vignettes/Nonparametric_Tests.Rmd | 131 ++- 131 files changed, 2844 insertions(+), 1982 deletions(-)
Title: Data Visualization Tools for Statistical Analysis Results
Description: Unified plotting tools for statistics commonly used, such as GLM,
time series, PCA families, clustering and survival analysis. The package offers
a single plotting interface for these analysis results and plots in a unified
style using 'ggplot2'.
Author: Masaaki Horikoshi [aut],
Yuan Tang [aut, cre] ,
Austin Dickey [ctb],
Matthias Grenie [ctb],
Ryan Thompson [ctb],
Luciano Selzer [ctb],
Dario Strbenac [ctb],
Kirill Voronin [ctb],
Damir Pulatov [ctb],
Emik Lin [ctb]
Maintainer: Yuan Tang <terrytangyuan@gmail.com>
Diff between ggfortify versions 0.4.19 dated 2025-07-27 and 0.4.22 dated 2026-08-24
DESCRIPTION | 14 ++++++----- MD5 | 50 ++++++++++++++++++++--------------------- NEWS.md | 15 ++++++++++++ R/base_fortify_ts.R | 2 - R/fortify_MSwM.R | 2 - R/fortify_base.R | 4 +-- R/fortify_basis.R | 4 +-- R/fortify_cluster.R | 2 - R/fortify_glmnet.R | 6 ++-- R/fortify_maps.R | 2 - R/fortify_raster.R | 2 - R/fortify_spatial.R | 2 - R/fortify_stats.R | 10 ++++---- R/fortify_stats_density.R | 2 - R/fortify_stats_lm.R | 18 +++++++------- R/fortify_surv.R | 7 +++-- R/geom.R | 2 - R/plotlib.R | 33 +++++++++++++++++++++------ R/tslib.R | 8 +++--- man/autoplot.pca_common.Rd | 2 + man/ggbiplot.Rd | 5 ++++ tests/testthat/test-basis.R | 11 +++++++++ tests/testthat/test-plotlib.R | 2 + tests/testthat/test-stats-lm.R | 10 ++++---- tests/testthat/test-stats.R | 30 ++++++++++++++++++++++++ tests/testthat/test-surv.R | 24 +++++++++---------- 26 files changed, 179 insertions(+), 90 deletions(-)
Title: Multi-Sequence Alignment Chord Diagram Visualization Tool
Description: A 'ggplot2'-based R package that visualizes multi-sequence alignment results as chord diagrams using layered grammar of graphics. Users build chord plots by stacking geom layers (geom_seq, geom_ribbon, geom_gene, geom_axis). Layout parameters are specified within each geom layer, following 'ggplot2' conventions. Homologous regions between query and subject sequences are intuitively displayed.
Author: Jem Dang [aut, cre]
Maintainer: Jem Dang <dangjem0730@gmail.com>
Diff between ggchord versions 0.2.0 dated 2025-07-16 and 0.8.0 dated 2026-08-24
ggchord-0.2.0/ggchord/man/chordPlotFunc.Rd |only ggchord-0.8.0/ggchord/DESCRIPTION | 24 ggchord-0.8.0/ggchord/MD5 | 163 ggchord-0.8.0/ggchord/NAMESPACE | 50 ggchord-0.8.0/ggchord/NEWS.md |only ggchord-0.8.0/ggchord/R/clean.R |only ggchord-0.8.0/ggchord/R/coord-chord.R |only ggchord-0.8.0/ggchord/R/data-import.R |only ggchord-0.8.0/ggchord/R/data_doc.R | 4 ggchord-0.8.0/ggchord/R/geom-axis.R |only ggchord-0.8.0/ggchord/R/geom-feature.R |only ggchord-0.8.0/ggchord/R/geom-gene.R |only ggchord-0.8.0/ggchord/R/geom-region.R |only ggchord-0.8.0/ggchord/R/geom-ribbon-highlight.R |only ggchord-0.8.0/ggchord/R/geom-ribbon.R |only ggchord-0.8.0/ggchord/R/geom-seq-label.R |only ggchord-0.8.0/ggchord/R/geom-seq.R |only ggchord-0.8.0/ggchord/R/ggchord.R | 2230 ++++++---- ggchord-0.8.0/ggchord/R/ggplotly.R |only ggchord-0.8.0/ggchord/R/helpers_base.R | 1067 ++++ ggchord-0.8.0/ggchord/R/helpers_elements.R | 42 ggchord-0.8.0/ggchord/R/helpers_params.R | 945 ++-- ggchord-0.8.0/ggchord/R/helpers_plot.R | 186 ggchord-0.8.0/ggchord/R/layout.R |only ggchord-0.8.0/ggchord/R/ribbon-utils.R |only ggchord-0.8.0/ggchord/R/validate.R |only ggchord-0.8.0/ggchord/R/zzz.R |only ggchord-0.8.0/ggchord/build/vignette.rds |binary ggchord-0.8.0/ggchord/data/gene_data_example.rda |binary ggchord-0.8.0/ggchord/data/ribbon_data_example.rda |binary ggchord-0.8.0/ggchord/data/seq_data_example.rda |binary ggchord-0.8.0/ggchord/inst/doc/ggchord_guide_hans.R |only ggchord-0.8.0/ggchord/inst/doc/ggchord_guide_hans.Rmd |only ggchord-0.8.0/ggchord/inst/doc/ggchord_guide_hans.html |only ggchord-0.8.0/ggchord/inst/doc/ggchord_vignette.R | 356 - ggchord-0.8.0/ggchord/inst/doc/ggchord_vignette.Rmd | 659 +- ggchord-0.8.0/ggchord/inst/doc/ggchord_vignette.html | 1588 ++++--- ggchord-0.8.0/ggchord/man/add_validation_issue.Rd |only ggchord-0.8.0/ggchord/man/as.data.frame.ggchord_validation.Rd |only ggchord-0.8.0/ggchord/man/attach_ggchord_scales.Rd |only ggchord-0.8.0/ggchord/man/bezier_pts.Rd | 6 ggchord-0.8.0/ggchord/man/chord_default_palette.Rd |only ggchord-0.8.0/ggchord/man/chord_palette_set1.Rd |only ggchord-0.8.0/ggchord/man/classify_ggchord_layers.Rd |only ggchord-0.8.0/ggchord/man/clean_ggchord_data.Rd |only ggchord-0.8.0/ggchord/man/clear_chord_env.Rd |only ggchord-0.8.0/ggchord/man/compute_chord_layout.Rd |only ggchord-0.8.0/ggchord/man/coord_chord.Rd |only ggchord-0.8.0/ggchord/man/deduplicate_ggchord_ribbons.Rd |only ggchord-0.8.0/ggchord/man/dot-chord_env.Rd |only ggchord-0.8.0/ggchord/man/extract_gff3_attr.Rd |only ggchord-0.8.0/ggchord/man/extract_ggchord_layer_data.Rd |only ggchord-0.8.0/ggchord/man/figures |only ggchord-0.8.0/ggchord/man/filter_ggchord_ribbons.Rd |only ggchord-0.8.0/ggchord/man/geom_axis.Rd |only ggchord-0.8.0/ggchord/man/geom_feature.Rd |only ggchord-0.8.0/ggchord/man/geom_gene.Rd |only ggchord-0.8.0/ggchord/man/geom_gene_label.Rd |only ggchord-0.8.0/ggchord/man/geom_gene_label_repel.Rd |only ggchord-0.8.0/ggchord/man/geom_ribbon.Rd |only ggchord-0.8.0/ggchord/man/geom_ribbon_highlight.Rd |only ggchord-0.8.0/ggchord/man/geom_seq.Rd |only ggchord-0.8.0/ggchord/man/geom_seq_label.Rd |only ggchord-0.8.0/ggchord/man/geom_seq_region.Rd |only ggchord-0.8.0/ggchord/man/get_chord_layout.Rd |only ggchord-0.8.0/ggchord/man/get_plot_extremes.Rd | 1 ggchord-0.8.0/ggchord/man/gff3_percent_decode.Rd |only ggchord-0.8.0/ggchord/man/ggchord.Rd | 171 ggchord-0.8.0/ggchord/man/ggchord_adaptive_limits.Rd |only ggchord-0.8.0/ggchord/man/ggchord_gene_fill.Rd |only ggchord-0.8.0/ggchord/man/ggchord_group_label_layer.Rd |only ggchord-0.8.0/ggchord/man/ggchord_hide_text_overlaps.Rd |only ggchord-0.8.0/ggchord/man/ggchord_label_deoverlap.Rd |only ggchord-0.8.0/ggchord/man/ggchord_label_pad.Rd |only ggchord-0.8.0/ggchord/man/ggchord_label_wrap_text.Rd |only ggchord-0.8.0/ggchord/man/ggchord_layer_data.Rd |only ggchord-0.8.0/ggchord/man/ggchord_layer_params.Rd |only ggchord-0.8.0/ggchord/man/ggchord_legend_positions.Rd |only ggchord-0.8.0/ggchord/man/ggchord_plotly_arrows.Rd |only ggchord-0.8.0/ggchord/man/ggchord_plotly_colors.Rd |only ggchord-0.8.0/ggchord/man/ggchord_plotly_ggplot.Rd |only ggchord-0.8.0/ggchord/man/ggchord_plotly_legend.Rd |only ggchord-0.8.0/ggchord/man/ggchord_repel_labels_final.Rd |only ggchord-0.8.0/ggchord/man/ggchord_repel_points.Rd |only ggchord-0.8.0/ggchord/man/ggchord_repel_segments.Rd |only ggchord-0.8.0/ggchord/man/ggchord_ribbon_fill.Rd |only ggchord-0.8.0/ggchord/man/ggchord_ribbon_key_dims.Rd |only ggchord-0.8.0/ggchord/man/ggchord_text_boxes.Rd |only ggchord-0.8.0/ggchord/man/ggchord_text_obstacle_boxes.Rd |only ggchord-0.8.0/ggchord/man/ggplotly.ggchord.Rd |only ggchord-0.8.0/ggchord/man/interval_recip_overlap.Rd |only ggchord-0.8.0/ggchord/man/key_glyph_gene.Rd |only ggchord-0.8.0/ggchord/man/key_glyph_ribbon.Rd |only ggchord-0.8.0/ggchord/man/key_glyph_seq.Rd |only ggchord-0.8.0/ggchord/man/make_ggchord_lazy_data.Rd |only ggchord-0.8.0/ggchord/man/make_ggchord_scales.Rd |only ggchord-0.8.0/ggchord/man/merge_ggchord_ribbons.Rd |only ggchord-0.8.0/ggchord/man/normalize_keep_pairs.Rd |only ggchord-0.8.0/ggchord/man/null-coalescing-operator.Rd |only ggchord-0.8.0/ggchord/man/plus-.ggchord.Rd |only ggchord-0.8.0/ggchord/man/prepare_ggchord_plot.Rd |only ggchord-0.8.0/ggchord/man/print.ggchord_clean.Rd |only ggchord-0.8.0/ggchord/man/process_axis_orientation.Rd | 7 ggchord-0.8.0/ggchord/man/process_gene_param.Rd | 25 ggchord-0.8.0/ggchord/man/process_manual_colors.Rd | 2 ggchord-0.8.0/ggchord/man/process_sequence_param.Rd | 15 ggchord-0.8.0/ggchord/man/read_blast.Rd |only ggchord-0.8.0/ggchord/man/read_fasta_lengths.Rd |only ggchord-0.8.0/ggchord/man/read_gff3.Rd |only ggchord-0.8.0/ggchord/man/reconstruct_layer.Rd |only ggchord-0.8.0/ggchord/man/rename_ribbon_layers.Rd |only ggchord-0.8.0/ggchord/man/resolve_ggchord_group_colors.Rd |only ggchord-0.8.0/ggchord/man/resolve_ggchord_seq_group.Rd |only ggchord-0.8.0/ggchord/man/ribbon_data_example.Rd | 4 ggchord-0.8.0/ggchord/man/set_chord_layout.Rd |only ggchord-0.8.0/ggchord/man/set_ggchord_coord.Rd |only ggchord-0.8.0/ggchord/man/validate_gene_segment_linetype.Rd |only ggchord-0.8.0/ggchord/man/validate_ggchord_data.Rd |only ggchord-0.8.0/ggchord/man/wire_ggchord_layer.Rd |only ggchord-0.8.0/ggchord/tests/testthat/test-clean.R |only ggchord-0.8.0/ggchord/tests/testthat/test-ggchord-validate.R |only ggchord-0.8.0/ggchord/tests/testthat/test-ggchord.R | 848 +++ ggchord-0.8.0/ggchord/tests/testthat/test-import.R |only ggchord-0.8.0/ggchord/tests/testthat/test-ribbon-utils.R |only ggchord-0.8.0/ggchord/tests/testthat/test-seq-group.R |only ggchord-0.8.0/ggchord/tests/testthat/test-v090.R |only ggchord-0.8.0/ggchord/tests/testthat/test-validation.R |only ggchord-0.8.0/ggchord/vignettes/ggchord_guide_hans.Rmd |only ggchord-0.8.0/ggchord/vignettes/ggchord_vignette.Rmd | 659 +- 129 files changed, 6001 insertions(+), 3051 deletions(-)
Title: Extension of `data.frame`
Description: Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and fast character-separated-value read/write. Offers a natural and flexible syntax, for faster development.
Author: Tyson Barrett [aut, cre] ,
Matt Dowle [aut],
Arun Srinivasan [aut],
Jan Gorecki [aut],
Michael Chirico [aut] ,
Toby Hocking [aut] ,
Benjamin Schwendinger [aut] ,
Ivan Krylov [aut] ,
Pasha Stetsenko [ctb],
Tom Short [ctb],
Steve Lianoglou [ctb],
Eduar [...truncated...]
Maintainer: Tyson Barrett <t.barrett88@gmail.com>
Diff between data.table versions 1.18.4 dated 2026-05-06 and 1.18.6.1 dated 2026-08-24
DESCRIPTION | 18 +- MD5 | 93 +++++----- NAMESPACE | 4 NEWS.md | 18 +- R/IDateTime.R | 2 R/data.table.R | 18 +- R/fdroplevels.R | 8 R/fmelt.R | 6 build/vignette.rds |binary inst/doc/datatable-benchmarking.html | 20 +- inst/doc/datatable-faq.html | 20 +- inst/doc/datatable-fread-and-fwrite.html | 20 +- inst/doc/datatable-importing.html | 20 +- inst/doc/datatable-intro.html | 20 +- inst/doc/datatable-joins.html | 20 +- inst/doc/datatable-keys-fast-subset.html | 26 +-- inst/doc/datatable-programming.html | 20 +- inst/doc/datatable-reference-semantics.R | 15 + inst/doc/datatable-reference-semantics.Rmd | 24 ++ inst/doc/datatable-reference-semantics.html | 44 +++-- inst/doc/datatable-reshape.html | 28 +-- inst/doc/datatable-sd-usage.html | 22 +- inst/doc/datatable-secondary-indices-and-auto-indexing.html | 30 +-- inst/tests/S4.Rraw.bz2 |binary inst/tests/melt_1754.R.gz |binary inst/tests/nafill.Rraw.bz2 |binary inst/tests/other.Rraw.bz2 |binary inst/tests/programming.Rraw.bz2 |binary inst/tests/tests.Rraw.bz2 |binary man/assign.Rd | 11 + man/selfref.ok.Rd | 3 man/special-symbols.Rd | 11 + man/truelength.Rd | 11 + src/assign.c | 2 src/coalesce.c | 2 src/data.table.h | 8 src/deleterows.c |only src/dogroups.c | 4 src/fmelt.c | 2 src/fread.c | 4 src/init.c | 4 src/rbindlist.c | 14 + src/reorder.c | 4 src/subset.c | 2 src/transpose.c | 6 src/utils.c | 104 +++++++++++- src/wrappers.c | 8 vignettes/datatable-reference-semantics.Rmd | 24 ++ 48 files changed, 521 insertions(+), 199 deletions(-)
Title: Bayesian Power Prior Design for Survival Data
Description: Bayesian power/type I error calculation and model fitting using
the power prior and the normalized power prior for proportional hazards models
with piecewise constant hazard. The methodology and examples of
applying the package are detailed in <doi:10.48550/arXiv.2404.05118>.
The Bayesian clinical trial design methodology is described in
Chen et al. (2011) <doi:10.1111/j.1541-0420.2011.01561.x>,
and Psioda and Ibrahim (2019) <doi:10.1093/biostatistics/kxy009>.
The proportional hazards model with piecewise constant hazard is detailed in
Ibrahim et al. (2001) <doi:10.1007/978-1-4757-3447-8>.
Author: Yueqi Shen [aut, cre],
Matthew A. Psioda [aut],
Joseph G. Ibrahim [aut]
Maintainer: Yueqi Shen <angieshen6@gmail.com>
Diff between BayesPPDSurv versions 1.0.3 dated 2024-04-09 and 1.0.4 dated 2026-08-24
DESCRIPTION | 14 +++++++------- MD5 | 12 ++++++------ NEWS.md | 7 +++++++ R/BayesPPDSurv-package.R | 2 +- R/phm_fixed_a0.R | 1 + R/phm_random_a0.R | 4 ++-- man/BayesPPDSurv-package.Rd | 2 +- 7 files changed, 25 insertions(+), 17 deletions(-)
Title: Create Spreadsheet Publications Following Best Practice
Description: Generate spreadsheet publications that follow best practice
guidance from the UK government's Analysis Function, available at
<https://analysisfunction.civilservice.gov.uk/policy-store/releasing-statistics-in-spreadsheets/>,
with a focus on accessibility. See also the 'Python' package 'gptables'.
Author: Matt Dray [aut],
Tim Taylor [ctb],
Matt Kerlogue [ctb],
Crown Copyright [cph],
Olivia Box Power [cre, ctb],
Zachary Gleisner [ctb]
Maintainer: Olivia Box Power <Olivia.BoxPower@dhsc.gov.uk>
Diff between aftables versions 2.0.1 dated 2026-04-22 and 2.1.0 dated 2026-08-24
DESCRIPTION | 12 - MD5 | 25 +- NAMESPACE | 41 ++-- NEWS.md | 424 ++++++++++++++++++++++---------------------- R/aftables-package.R | 56 ++--- R/utils-workbook.R | 117 +++++++++--- R/utils.R | 151 +++++++++++++++ inst/doc/aftables.R | 11 + inst/doc/aftables.Rmd | 20 ++ inst/doc/aftables.html | 182 +++++++++++------- inst/rstudio/addins.dcf | 2 man/number_formatter.Rd |only tests/testthat/test-utils.R | 138 ++++++++++++++ vignettes/aftables.Rmd | 20 ++ 14 files changed, 823 insertions(+), 376 deletions(-)
Title: Analyzing Randomized Experiments Using Multi-Arm Bandits
Description: Simulates response-adaptive experimental trials using
Multi-Arm Bandits. Adaptive robust estimators defined in Hadad et al.
(2021) <doi:10.1073/pnas.2014602118> and Offer-Westort et al. (2021)
<doi:10.1111/ajps.12597> are used to robustly estimate conditional
expectations and treatment effects. Provides significant simulation
customization options for imperfect information, non-stationary
bandits, and increased exploration strategies for assignments.
Author: Noah Ochital [aut, cre, cph] ,
Ryan T. Moore [ctb, cph]
Maintainer: Noah Ochital <no9857a@american.edu>
This is a re-admission after prior archival of version 1.0.2 dated 2026-07-23
Diff between whatifbandit versions 1.0.2 dated 2026-07-23 and 1.0.3 dated 2026-08-24
whatifbandit-1.0.2/whatifbandit/inst/doc/whatifbandit.rmd |only whatifbandit-1.0.2/whatifbandit/vignettes/datatable.R |only whatifbandit-1.0.2/whatifbandit/vignettes/datatable.RData |only whatifbandit-1.0.2/whatifbandit/vignettes/parallel.R |only whatifbandit-1.0.2/whatifbandit/vignettes/parallel.RData |only whatifbandit-1.0.2/whatifbandit/vignettes/whatifbandit.rmd |only whatifbandit-1.0.3/whatifbandit/DESCRIPTION | 11 whatifbandit-1.0.3/whatifbandit/MD5 | 59 whatifbandit-1.0.3/whatifbandit/NEWS.md | 17 whatifbandit-1.0.3/whatifbandit/R/bandit.R | 2 whatifbandit-1.0.3/whatifbandit/R/hypothesis_test.R | 13 whatifbandit-1.0.3/whatifbandit/R/impute.R | 106 whatifbandit-1.0.3/whatifbandit/R/mab_from_rct.R | 18 whatifbandit-1.0.3/whatifbandit/R/mab_loop.R | 2 whatifbandit-1.0.3/whatifbandit/R/sim_api.R | 19 whatifbandit-1.0.3/whatifbandit/R/simulate_mab.R | 22 whatifbandit-1.0.3/whatifbandit/R/tanf.R | 74 whatifbandit-1.0.3/whatifbandit/R/whatifbandit-package.R | 12 whatifbandit-1.0.3/whatifbandit/README.md | 2 whatifbandit-1.0.3/whatifbandit/build/vignette.rds |binary whatifbandit-1.0.3/whatifbandit/inst/doc/whatifbandit.R |only whatifbandit-1.0.3/whatifbandit/inst/doc/whatifbandit.html | 872 ++++- whatifbandit-1.0.3/whatifbandit/inst/doc/whatifbandit.qmd |only whatifbandit-1.0.3/whatifbandit/man/impute_outcomes.Rd | 2 whatifbandit-1.0.3/whatifbandit/man/joint_test.Rd | 13 whatifbandit-1.0.3/whatifbandit/man/mab_from_rct.Rd | 15 whatifbandit-1.0.3/whatifbandit/man/precompute_imputation.Rd | 20 whatifbandit-1.0.3/whatifbandit/man/prep_imputation.Rd | 19 whatifbandit-1.0.3/whatifbandit/man/simulate_mab.Rd | 19 whatifbandit-1.0.3/whatifbandit/tests/testthat.R | 24 whatifbandit-1.0.3/whatifbandit/tests/testthat/_snaps/error_checking.md | 132 whatifbandit-1.0.3/whatifbandit/tests/testthat/test-small_helpers.r | 25 whatifbandit-1.0.3/whatifbandit/vignettes/REFERENCES.bib | 1590 ++++++++-- whatifbandit-1.0.3/whatifbandit/vignettes/pure_sims.RData |only whatifbandit-1.0.3/whatifbandit/vignettes/tanf_sims.RData |only whatifbandit-1.0.3/whatifbandit/vignettes/whatifbandit.qmd |only 36 files changed, 2464 insertions(+), 624 deletions(-)
Title: Access 'Office for Budget Responsibility' Data
Description: Provides clean, tidy access to data published by the 'Office for
Budget Responsibility' ('OBR'), the UK's independent fiscal watchdog. Covers
the Public Finances Databank (outturn for PSNB, PSND, receipts, and
expenditure since 1946), the Historical Official Forecasts Database (every
'OBR' forecast since 2010), the Economic and Fiscal Outlook detailed forecast
tables (five-year projections from the latest Budget), the monthly
profiles for the public finances (the 'OBR' forecast apportioned across
the months of the fiscal year), and the Welfare Trends Report
(incapacity benefit spending and caseloads). All returned
objects carry provenance metadata recording the source URL, publication
vintage, retrieval time, and file fingerprint, so analyses can be audited
and reproduced. Data is downloaded from the 'OBR' on first use and cached
locally for subsequent calls. Data is sourced from the 'OBR' website
<https://obr.uk>.
Author: Charles Coverdale [aut, cre]
Maintainer: Charles Coverdale <charlesfcoverdale@gmail.com>
This is a re-admission after prior archival of version 0.6.0 dated 2026-08-02
Diff between obr versions 0.6.0 dated 2026-08-02 and 0.6.2 dated 2026-08-24
DESCRIPTION | 11 ++--- MD5 | 72 +++++++++++++++++++------------------- NEWS.md | 75 ++++++++++++++++++++++++++++++++++++++++ R/compare.R | 34 ++++++++++-------- R/efo.R | 32 +++++++++-------- R/efo_dispatcher.R | 19 +++++----- R/forecast_panel.R | 8 ++-- R/forecast_revisions.R | 10 +++-- R/forecasts.R | 8 ++-- R/policy_measures.R | 21 ++++++----- R/public_finances.R | 32 +++++++++++------ R/tbl.R | 6 ++- R/utils.R | 12 ++++++ R/vintages.R | 14 ++++--- R/welfare.R | 20 ++++++---- README.md | 2 - man/get_efo_economy.Rd | 14 ++++--- man/get_efo_fiscal.Rd | 12 +++--- man/get_efo_table.Rd | 19 +++++----- man/get_expenditure.Rd | 6 ++- man/get_forecast_revisions.Rd | 10 +++-- man/get_forecasts.Rd | 8 ++-- man/get_incapacity_caseloads.Rd | 6 ++- man/get_incapacity_spending.Rd | 6 ++- man/get_psnb.Rd | 6 ++- man/get_psnd.Rd | 6 ++- man/get_public_finances.Rd | 8 ++-- man/get_receipts.Rd | 6 ++- man/get_welfare_spending.Rd | 8 ++-- man/obr-package.Rd | 2 - man/obr_actual_vs_forecast.Rd | 12 +++--- man/obr_compare_vintages.Rd | 18 +++++---- man/obr_forecast_panel.Rd | 8 ++-- man/obr_pin.Rd | 8 ++-- man/obr_provenance.Rd | 6 ++- man/obr_unpin.Rd | 6 ++- man/policy_measures_summary.Rd | 6 ++- 37 files changed, 361 insertions(+), 196 deletions(-)
Title: Person-Specific (Idiographic) and Heterogeneous Complex Networks
Description: Person-specific and within-person network estimation from
intensive longitudinal and panel data. Estimators include ordinary
vector autoregression (VAR), graphical vector autoregression (graphical
VAR), multilevel vector autoregression (mlVAR), rolling ordinary and
graphical VAR, native Bayesian VAR and multilevel Bayesian VAR, unified
Structural Equation Modeling (uSEM), and Group Iterative Multiple Model
Estimation (GIMME). All estimators are native clean-room
implementations. All functions are validated against
authoritative literature. Also provides preprocessing audits,
edge-stability diagnostics, model-comparison reports, and rolling
forecast validation. Methods are described in
<doi:10.1007/978-3-031-95365-1_20> and
<doi:10.1080/00273171.2018.1454823>.
Author: Mohammed Saqr [aut, cre, cph],
Sonsoles Lopez-Pernas [aut]
Maintainer: Mohammed Saqr <saqr@saqr.me>
Diff between idiographic versions 0.3.2 dated 2026-08-03 and 0.3.4 dated 2026-08-24
idiographic-0.3.2/idiographic/inst/doc/bayesian-var-dsem.R |only idiographic-0.3.2/idiographic/inst/doc/bayesian-var-dsem.Rmd |only idiographic-0.3.2/idiographic/inst/doc/bayesian-var-dsem.html |only idiographic-0.3.2/idiographic/inst/doc/gimme.R |only idiographic-0.3.2/idiographic/inst/doc/gimme.Rmd |only idiographic-0.3.2/idiographic/inst/doc/gimme.html |only idiographic-0.3.2/idiographic/inst/doc/graphical-var.R |only idiographic-0.3.2/idiographic/inst/doc/graphical-var.Rmd |only idiographic-0.3.2/idiographic/inst/doc/graphical-var.html |only idiographic-0.3.2/idiographic/vignettes/bayesian-var-dsem.Rmd |only idiographic-0.3.2/idiographic/vignettes/gimme.Rmd |only idiographic-0.3.2/idiographic/vignettes/graphical-var.Rmd |only idiographic-0.3.4/idiographic/DESCRIPTION | 9 idiographic-0.3.4/idiographic/MD5 | 69 +++--- idiographic-0.3.4/idiographic/NAMESPACE | 7 idiographic-0.3.4/idiographic/NEWS.md | 74 ++++++ idiographic-0.3.4/idiographic/R/glasso.R |only idiographic-0.3.4/idiographic/R/glasso_pure.R | 56 ++++- idiographic-0.3.4/idiographic/R/graphical_var.R | 6 idiographic-0.3.4/idiographic/R/vendored.R | 87 ++++--- idiographic-0.3.4/idiographic/README.md | 4 idiographic-0.3.4/idiographic/build/partial.rdb |only idiographic-0.3.4/idiographic/build/vignette.rds |binary idiographic-0.3.4/idiographic/inst/WORDLIST | 111 +++++----- idiographic-0.3.4/idiographic/inst/doc/clean-room-methods.Rmd | 2 idiographic-0.3.4/idiographic/inst/doc/mlvar.R | 29 +- idiographic-0.3.4/idiographic/inst/doc/mlvar.Rmd | 31 +- idiographic-0.3.4/idiographic/inst/doc/rolling-networks.Rmd | 2 idiographic-0.3.4/idiographic/inst/doc/usem.Rmd | 2 idiographic-0.3.4/idiographic/man/as.data.frame.glasso_path_result.Rd |only idiographic-0.3.4/idiographic/man/as.data.frame.glasso_result.Rd |only idiographic-0.3.4/idiographic/man/glasso_fit.Rd |only idiographic-0.3.4/idiographic/man/glasso_kkt.Rd |only idiographic-0.3.4/idiographic/man/glasso_path.Rd |only idiographic-0.3.4/idiographic/man/idiographic-package.Rd | 1 idiographic-0.3.4/idiographic/man/matrices.Rd | 54 +++- idiographic-0.3.4/idiographic/man/print.glasso_path_result.Rd |only idiographic-0.3.4/idiographic/man/print.glasso_result.Rd |only idiographic-0.3.4/idiographic/tests/testthat/test-glasso-public.R |only idiographic-0.3.4/idiographic/tests/testthat/test-matrices-print.R |only idiographic-0.3.4/idiographic/tests/testthat/test-mlvar.R | 7 idiographic-0.3.4/idiographic/tests/testthat/test-registry.R | 1 idiographic-0.3.4/idiographic/tests/testthat/test-review-fixes.R | 2 idiographic-0.3.4/idiographic/vignettes/clean-room-methods.Rmd | 2 idiographic-0.3.4/idiographic/vignettes/mlvar.Rmd | 31 +- idiographic-0.3.4/idiographic/vignettes/rolling-networks.Rmd | 2 idiographic-0.3.4/idiographic/vignettes/usem.Rmd | 2 47 files changed, 393 insertions(+), 198 deletions(-)
Title: Native 'LaTeX' Math Rendering for Grid Graphics
Description: Renders 'LaTeX' math equations as native R grid graphics objects
(grobs) using the 'MicroTeX' 'C++' library as the layout engine. Produces
resolution-independent vector output that works on any R graphics device,
with no external 'LaTeX' installation required. Markdown labels and block
documents that mix prose formatting with math are also rendered, for use
with both 'grid' and 'ggplot2'.
Author: Alim Dayim [aut, cre] ,
Nano Michael [cph] ,
Bundled math font authors [cph]
Maintainer: Alim Dayim <ad938@cam.ac.uk>
Diff between gridmicrotex versions 0.1.0 dated 2026-08-21 and 0.1.1 dated 2026-08-24
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Title: HM Treasury Green Book Cost-Benefit Analysis Primitives
Description: Implements cost-benefit analysis primitives from HM
Treasury Green Book guidance (HM Treasury, 2022, 2026):
the kinked Social Time Preference Rate (STPR), discount factors,
net present value (NPV), equivalent annual cost, and real-terms
rebasing using the GDP deflator. Designed for UK central government
appraisal and evaluation. Bundled parameter tables carry vintage
metadata for reproducibility.
Author: Charles Coverdale [aut, cre]
Maintainer: Charles Coverdale <charlesfcoverdale@gmail.com>
Diff between greenbook versions 0.1.0 dated 2026-04-28 and 0.1.1 dated 2026-08-24
DESCRIPTION | 14 ++++---- MD5 | 59 +++++++++++++++++------------------ NEWS.md | 50 +++++++++++++++++++++++++++++ R/adjustments.R | 39 +++++++++++++++++++---- R/carbon.R | 5 +- R/compare.R | 5 +- R/deflator.R | 8 ++-- R/discounting.R | 20 +++++++---- R/distributional.R | 8 ++-- R/stpr.R | 22 ++++++++++--- README.md | 25 +++++++++++--- inst/CITATION | 2 - inst/WORDLIST |only inst/doc/carbon-and-environment.html | 2 - inst/doc/greenbook.html | 2 - inst/extdata/data_versions.csv | 2 - inst/extdata/metb.csv | 2 - man/gb_carbon_npv.Rd | 5 +- man/gb_compare.Rd | 5 +- man/gb_discount.Rd | 3 + man/gb_discount_factor.Rd | 6 ++- man/gb_dist_weight.Rd | 4 +- man/gb_dist_weighted_npv.Rd | 4 +- man/gb_eanc.Rd | 7 ++-- man/gb_metb.Rd | 30 ++++++++++++++--- man/gb_npv.Rd | 4 +- man/gb_real.Rd | 4 +- man/gb_rebase.Rd | 4 +- man/gb_stpr.Rd | 22 ++++++++++--- man/greenbook-package.Rd | 2 - tests/testthat/test-adjustments.R | 7 +++- 31 files changed, 263 insertions(+), 109 deletions(-)
Title: Generalized Kumaraswamy Regression Models for Bounded Data
Description: Implements regression models for bounded continuous data in the
open interval (0,1) using the five-parameter Generalized 'Kumaraswamy'
distribution. Supports modeling all distribution parameters (alpha, beta,
gamma, delta, lambda) as functions of predictors through various link
functions. Provides efficient maximum likelihood estimation via Template
Model Builder ('TMB'), offering comprehensive diagnostics, model comparison
tools, and simulation methods. Particularly useful for analyzing
proportions, rates, indices, and other bounded response data with complex
distributional features not adequately captured by simpler models. Methods
are described in Lopes and Bonat (2026) <doi:10.21105/joss.08991>.
Author: Jose Evandeilton Lopes [aut, cre] ,
Wagner Hugo Bonat [aut]
Maintainer: Jose Evandeilton Lopes <evandeilton@gmail.com>
Diff between gkwreg versions 2.1.14 dated 2026-01-09 and 2.1.18 dated 2026-08-24
gkwreg-2.1.14/gkwreg/inst/paper |only gkwreg-2.1.18/gkwreg/DESCRIPTION | 51 gkwreg-2.1.18/gkwreg/LICENSE | 4 gkwreg-2.1.18/gkwreg/MD5 | 37 gkwreg-2.1.18/gkwreg/NAMESPACE | 2 gkwreg-2.1.18/gkwreg/NEWS.md | 103 + gkwreg-2.1.18/gkwreg/R/zzz.R | 2 gkwreg-2.1.18/gkwreg/README.md | 39 gkwreg-2.1.18/gkwreg/build/partial.rdb |binary gkwreg-2.1.18/gkwreg/build/vignette.rds |binary gkwreg-2.1.18/gkwreg/inst/CITATION |only gkwreg-2.1.18/gkwreg/inst/WORDLIST | 6 gkwreg-2.1.18/gkwreg/inst/doc/gkwreg-vs-betareg.R | 473 +------- gkwreg-2.1.18/gkwreg/inst/doc/gkwreg-vs-betareg.Rmd | 566 ++-------- gkwreg-2.1.18/gkwreg/inst/doc/gkwreg-vs-betareg.html | 459 ++++---- gkwreg-2.1.18/gkwreg/inst/extdata |only gkwreg-2.1.18/gkwreg/man/fitted.gkwreg.Rd | 2 gkwreg-2.1.18/gkwreg/tests/testthat/test-gkwreg-beta-vs-betareg.R | 3 gkwreg-2.1.18/gkwreg/vignettes/gkwreg-vs-betareg.Rmd | 566 ++-------- 19 files changed, 785 insertions(+), 1528 deletions(-)
Title: Fitting and Assessing Neighborhood Models of the Effect of
Interspecific Competition on the Growth of Trees
Description: Code for fitting and assessing models for the growth of trees. In
particular for the Bayesian neighborhood competition linear regression model
of Allen (2020): methods for model fitting and generating fitted/predicted
values, evaluating the effect of competitor species identity using
permutation tests, and evaluating model performance using spatial
cross-validation.
Author: Albert Y. Kim [aut, cre] ,
David Allen [aut] ,
Simon Couch [aut]
Maintainer: Albert Y. Kim <albert.ys.kim@gmail.com>
Diff between forestecology versions 0.2.2 dated 2026-08-19 and 0.2.3 dated 2026-08-24
DESCRIPTION | 7 ++-- MD5 | 32 +++++++++--------- NAMESPACE | 34 +++++++------------- NEWS.md | 7 ++++ R/data_processing_functions.R | 2 - R/example_datasets.R | 9 ++--- inst/doc/forestecology.R | 8 ++-- inst/doc/forestecology.Rmd | 34 +++++++++----------- inst/doc/forestecology.html | 14 ++++---- man/figures/README-unnamed-chunk-11-1.png |binary man/figures/README-unnamed-chunk-15-1.png |binary man/growth_ex.Rd | 9 ++--- tests/testthat/test-readme.R | 14 ++++---- tests/testthat/test-utils.R | 2 - vignettes/forestecology.Rmd | 34 +++++++++----------- vignettes/man/figures/README-unnamed-chunk-13-1.png |binary vignettes/man/figures/README-unnamed-chunk-9-1.png |binary 17 files changed, 99 insertions(+), 107 deletions(-)
Title: APSIM Next Generation
Description: The Agricultural Production Systems sIMulator ('APSIM') is a widely
used to simulate the agricultural systems for multiple crops. This package
is designed to create, modify and run 'apsimx' files in the 'APSIM' Next
Generation <https://www.apsim.info/>.
Author: Bangyou Zheng [aut, cre]
Maintainer: Bangyou Zheng <zheng.bangyou@gmail.com>
Diff between rapsimng versions 0.5.0 dated 2026-05-06 and 0.6.0 dated 2026-08-24
DESCRIPTION | 8 ++++---- MD5 | 8 ++++---- R/run_models.R | 29 +++++++++++++++++++---------- README.md | 2 +- man/run_models.Rd | 6 +++--- 5 files changed, 31 insertions(+), 22 deletions(-)
Title: Run Predictions Inside the Database
Description: It parses a fitted 'R' model object, and returns a formula in
'Tidy Eval' code that calculates the predictions. It works with
several databases back-ends because it leverages 'dplyr' and 'dbplyr'
for the final 'SQL' translation of the algorithm. It currently
supports lm(), glm(), randomForest(), ranger(), rpart(), earth(),
xgb.Booster.complete(), lgb.Booster(), catboost.Model(), cubist(), and
ctree() models.
Author: Emil Hvitfeldt [aut, cre],
Edgar Ruiz [aut],
Max Kuhn [aut]
Maintainer: Emil Hvitfeldt <emil.hvitfeldt@posit.co>
Diff between tidypredict versions 1.1.0 dated 2026-02-27 and 1.1.1 dated 2026-08-24
DESCRIPTION | 16 +- MD5 | 127 ++++++++--------- NEWS.md | 4 R/model-xgboost.R | 17 ++ build/vignette.rds |binary inst/doc/catboost.R | 1 inst/doc/catboost.Rmd | 1 inst/doc/cubist.R | 1 inst/doc/cubist.Rmd | 1 inst/doc/cubist.html | 2 inst/doc/glm.R | 1 inst/doc/glm.Rmd | 1 inst/doc/glm.html | 6 inst/doc/glmnet.R | 1 inst/doc/glmnet.Rmd | 1 inst/doc/glmnet.html | 6 inst/doc/lightgbm.R | 1 inst/doc/lightgbm.Rmd | 1 inst/doc/lm.R | 1 inst/doc/lm.Rmd | 1 inst/doc/lm.html | 10 - inst/doc/mars.R | 1 inst/doc/mars.Rmd | 1 inst/doc/mars.html | 36 ++-- inst/doc/non-r.html | 2 inst/doc/ranger.R | 1 inst/doc/ranger.Rmd | 1 inst/doc/rf.R | 1 inst/doc/rf.Rmd | 1 inst/doc/rf.html | 136 +++++++++--------- inst/doc/rpart.R | 1 inst/doc/rpart.Rmd | 1 inst/doc/save.html | 4 inst/doc/sql.R | 1 inst/doc/sql.Rmd | 1 inst/doc/sql.html | 20 +- inst/doc/tree-internals.R | 1 inst/doc/tree-internals.Rmd | 1 inst/doc/xgboost.R | 1 inst/doc/xgboost.Rmd | 1 tests/testthat.R | 38 +++++ tests/testthat/_snaps/model-glmnet.md | 8 - tests/testthat/_snaps/model-ranger.md | 2 tests/testthat/catboost_info |only tests/testthat/test-model-glmnet.R | 12 + tests/testthat/test-model-lightgbm.R | 243 ++++++++++++++++++++++++++------- tests/testthat/test-model-ranger.R | 44 ++--- tests/testthat/test-model-xgboost.R | 109 ++++++++++++-- tests/testthat/test-predict-fit.R | 7 tests/testthat/test-tidypredict_test.R | 17 +- vignettes/_threads.R |only vignettes/catboost.Rmd | 1 vignettes/cubist.Rmd | 1 vignettes/glm.Rmd | 1 vignettes/glmnet.Rmd | 1 vignettes/lightgbm.Rmd | 1 vignettes/lm.Rmd | 1 vignettes/mars.Rmd | 1 vignettes/ranger.Rmd | 1 vignettes/rf.Rmd | 1 vignettes/rpart.Rmd | 1 vignettes/sql.Rmd | 1 vignettes/tree-internals.Rmd | 1 vignettes/xgboost.Rmd | 1 64 files changed, 625 insertions(+), 280 deletions(-)
Title: A Lightweight Interface Between 'igraph' and 'ggplot2' Graphics
Description: An interface for rendering 'igraph' objects as 'ggplot2' graphics
within a normalized coordinate space. 'RGraphSpace' implements new
geometries that treat a graph as a single coherent object, synchronizing
node and edge layers under standard aesthetic mappings. Node features are
resolved on demand, supporting high-dimensional data without expanding
node tables. Spatial alignment is available at the pixel level,
with node coordinates anchored to pixel centers through a half-pixel
offset, enabling precise node positioning over external reference frames
such as images and maps.
Author: Sysbiolab Team [aut],
Flavio Kessler [ctb],
Jonathan Back [ctb],
Lana Querne [ctb],
Victor Apolonio [ctb],
Vinicius Chagas [ctb],
Mauro Castro [cre]
Maintainer: Mauro Castro <mauro.a.castro@gmail.com>
Diff between RGraphSpace versions 1.5.0 dated 2026-07-23 and 1.5.2 dated 2026-08-24
DESCRIPTION | 17 - MD5 | 89 +++--- NAMESPACE | 31 ++ R/annotation-gspace.R | 23 - R/geom-edgespace.R | 335 ++++++++++++++++------- R/geom-nodespace.R | 36 +- R/gspace-accessors.R |only R/gspace-addition.R | 38 +- R/gspace-checks.R | 1 R/gspace-classes.R | 300 ++++++++++++++------ R/gspace-coercion.R | 293 ++++++++++++++------ R/gspace-constructor.R | 133 ++++++++- R/gspace-features.R | 15 - R/gspace-generics.R | 55 +++ R/gspace-geometry.R |only R/gspace-ggplot-constructor.R | 2 R/gspace-methods.R | 530 ++++++------------------------------- R/gspace-misc.R | 141 +++++++++ R/gspace-normalize.R | 378 ++++++++------------------ R/gspace-subscript.R | 11 R/gspace-subset.R | 13 R/gspace-themes.R | 31 +- R/gspace-transform.R |only R/gspace-validation.R | 51 ++- data/gs_image_toy.RData |binary data/gtoy1.RData |binary inst/NEWS.Rd | 15 + inst/doc/RGraphSpace.R | 32 +- inst/doc/RGraphSpace.Rmd | 64 +++- inst/doc/RGraphSpace.html | 197 ++++++++++--- man/GraphSpace-accessors.Rd | 41 ++ man/GraphSpace-class.Rd | 4 man/GraphSpace-internal.Rd | 2 man/GraphSpace-methods.Rd | 3 man/GraphSpace-transform.Rd |only man/RGraphSpace-package.Rd | 2 man/annotation_gspace_image.Rd | 4 man/as.GraphSpace.Rd | 25 + man/geom_edgespace.Rd | 45 ++- man/geom_nodespace.Rd | 23 + man/geometry-methods.Rd |only man/getGraphSpace-methods.Rd | 2 man/gs_add_edges.Rd | 11 man/normalizeGraphSpace-methods.Rd | 78 ++--- man/sfshape_ngons.Rd |only man/sfshape_stars.Rd |only vignettes/RGraphSpace.Rmd | 64 +++- vignettes/bibliography.bib | 82 +++++ vignettes/custom.css | 4 49 files changed, 1924 insertions(+), 1297 deletions(-)
Title: Fast Nearest Neighbour Search (Wraps ANN Library) Using L2
Metric
Description: Finds the k nearest neighbours for every point in a
given dataset in O(N log N) time using Arya and Mount's ANN library
(v1.1.3). There is support for approximate as well as exact searches,
fixed radius searches and 'bd' as well as 'kd' trees. The distance is
computed using the L2 (Euclidean) metric. Please see package 'RANN.L1'
for the same functionality using the L1 (Manhattan, taxicab) metric.
Author: Gregory Jefferis [aut, cre] ,
Samuel E. Kemp [aut],
Kirill Mueller [ctb] ,
Sunil Arya [aut, cph] ,
David Mount [aut, cph] ,
University of Maryland [cph]
Maintainer: Gregory Jefferis <jefferis@gmail.com>
Diff between RANN versions 2.6.2 dated 2024-08-25 and 2.6.3 dated 2026-08-24
DESCRIPTION | 17 +++++++------- MD5 | 12 +++++----- NEWS.md | 4 +++ R/nn.R | 54 ++++++++++++++++++++++++----------------------- man/RANN-package.Rd | 1 man/nn2.Rd | 54 ++++++++++++++++++++++++----------------------- tests/testthat/test-nn.R | 20 ++++++++--------- 7 files changed, 86 insertions(+), 76 deletions(-)
Title: Mixed Temporal Vectors and Operations
Description: Flexible time classes for time series analysis and forecasting with
mixed temporal granularities. Supports linear and cyclical time
representations in discrete and continuous forms, with timezone support,
across multiple calendar systems including Gregorian and ISO week date
calendars. Time points are stored numerically relative to a chronon; an
atomic time granule defined by time units of a calendar. Calendrical
arithmetic enables conversion between time granules (e.g. days to months)
and calendar systems. Multi-unit arithmetic allows for temporal analysis
with other granules of common calendars (e.g. fortnights are 2-week units).
Time vectors of different granularities (e.g. monthly and quarterly) can be
combined in a single vector, making 'mixtime' ideal for data that changes
observation frequency over time or requires temporal reconciliation across
scales. The package is extensible, allowing users to define custom calendars
that build upon civil and astronomical time systems.
Author: Mitchell O'Hara-Wild [aut, cre]
Maintainer: Mitchell O'Hara-Wild <mail@mitchelloharawild.com>
Diff between mixtime versions 0.2.0 dated 2026-06-28 and 0.3.0 dated 2026-08-24
mixtime-0.2.0/mixtime/R/01_cyclical_labels.R |only mixtime-0.2.0/mixtime/R/01_linear_labels.R |only mixtime-0.2.0/mixtime/man/cyclical_labels.Rd |only mixtime-0.2.0/mixtime/man/linear_labels.Rd |only mixtime-0.3.0/mixtime/DESCRIPTION | 9 mixtime-0.3.0/mixtime/MD5 | 189 +- mixtime-0.3.0/mixtime/NAMESPACE | 89 - mixtime-0.3.0/mixtime/NEWS.md | 255 +++ mixtime-0.3.0/mixtime/R/00_classes.R | 116 + mixtime-0.3.0/mixtime/R/00_utils.R | 172 +- mixtime-0.3.0/mixtime/R/01_calendar.R | 5 mixtime-0.3.0/mixtime/R/01_chronon_cardinality.R | 64 mixtime-0.3.0/mixtime/R/01_chronon_divmod.R | 29 mixtime-0.3.0/mixtime/R/01_chronon_format.R | 19 mixtime-0.3.0/mixtime/R/01_chronon_parse.R |only mixtime-0.3.0/mixtime/R/01_labels.R |only mixtime-0.3.0/mixtime/R/01_naive.R | 2 mixtime-0.3.0/mixtime/R/01_time_unit.R | 9 mixtime-0.3.0/mixtime/R/arithmetic.R |only mixtime-0.3.0/mixtime/R/cal0_time_civil.R | 346 +++- mixtime-0.3.0/mixtime/R/cal0_time_lunar.R | 31 mixtime-0.3.0/mixtime/R/cal0_time_solar.R | 128 + mixtime-0.3.0/mixtime/R/cal_gregorian.R | 335 ++-- mixtime-0.3.0/mixtime/R/cal_isoweek.R | 56 mixtime-0.3.0/mixtime/R/cal_sym454.R | 69 mixtime-0.3.0/mixtime/R/chronon_common.R | 59 mixtime-0.3.0/mixtime/R/chronon_convert.R | 100 - mixtime-0.3.0/mixtime/R/clamp.R |only mixtime-0.3.0/mixtime/R/coerce.R |only mixtime-0.3.0/mixtime/R/compare.R |only mixtime-0.3.0/mixtime/R/compat-ggplot2.R |only mixtime-0.3.0/mixtime/R/components.R |only mixtime-0.3.0/mixtime/R/compose.R |only mixtime-0.3.0/mixtime/R/duration.R | 142 - mixtime-0.3.0/mixtime/R/format.R | 175 +- mixtime-0.3.0/mixtime/R/graph_dispatch.R | 767 +++++++--- mixtime-0.3.0/mixtime/R/linear_time.R | 153 - mixtime-0.3.0/mixtime/R/location.R | 6 mixtime-0.3.0/mixtime/R/mixtime-package.R | 2 mixtime-0.3.0/mixtime/R/mixtime.R | 76 mixtime-0.3.0/mixtime/R/parse.R | 488 ++++++ mixtime-0.3.0/mixtime/R/predicates.R | 209 ++ mixtime-0.3.0/mixtime/R/round.R | 119 - mixtime-0.3.0/mixtime/R/sequence.R | 205 +- mixtime-0.3.0/mixtime/R/time.R | 105 + mixtime-0.3.0/mixtime/R/time_chronon.R | 2 mixtime-0.3.0/mixtime/R/time_cycle.R | 2 mixtime-0.3.0/mixtime/R/time_granule.R | 54 mixtime-0.3.0/mixtime/R/time_parts.R | 235 +-- mixtime-0.3.0/mixtime/R/timezone.R | 110 + mixtime-0.3.0/mixtime/R/tsbl-compat.R | 6 mixtime-0.3.0/mixtime/R/vctrs.R | 319 ++-- mixtime-0.3.0/mixtime/R/zzz.R | 16 mixtime-0.3.0/mixtime/README.md | 20 mixtime-0.3.0/mixtime/inst/doc/extending-mixtime.R | 94 - 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Title: Lightweight Output Formats for 'litedown'
Description: A collection of lightweight, minimalist output formats and
templates for 'litedown' by Xie (2026) <doi:10.32614/CRAN.package.litedown>,
including resumes, cover letters, and other common document types.
Documents are rendered with HTML and CSS and can be printed to PDF with a
'Chromium'-based browser, without requiring 'Pandoc' or a 'LaTeX' installation.
Author: Nan Xiao [aut, cre, cph] ,
Yihui Xie [ctb, cph] ,
Ayuhito [ctb, cph]
Maintainer: Nan Xiao <me@nanx.me>
Diff between liteformats versions 0.1.0 dated 2026-08-05 and 0.2.0 dated 2026-08-24
liteformats-0.1.0/liteformats/inst/doc/formats.R |only liteformats-0.1.0/liteformats/inst/doc/formats.Rmd |only liteformats-0.1.0/liteformats/inst/doc/formats.html |only liteformats-0.1.0/liteformats/vignettes/formats.Rmd |only liteformats-0.2.0/liteformats/DESCRIPTION | 15 liteformats-0.2.0/liteformats/MD5 | 67 + liteformats-0.2.0/liteformats/NAMESPACE | 3 liteformats-0.2.0/liteformats/NEWS.md | 39 liteformats-0.2.0/liteformats/R/graphics.R |only liteformats-0.2.0/liteformats/R/options.R |only liteformats-0.2.0/liteformats/R/render.R | 462 +++++----- liteformats-0.2.0/liteformats/R/templates.R | 4 liteformats-0.2.0/liteformats/README.md | 96 -- liteformats-0.2.0/liteformats/build/vignette.rds |binary liteformats-0.2.0/liteformats/inst/doc/config.R |only liteformats-0.2.0/liteformats/inst/doc/config.Rmd |only liteformats-0.2.0/liteformats/inst/doc/config.html |only liteformats-0.2.0/liteformats/inst/doc/cover-letter.R |only liteformats-0.2.0/liteformats/inst/doc/cover-letter.Rmd |only liteformats-0.2.0/liteformats/inst/doc/cover-letter.html |only liteformats-0.2.0/liteformats/inst/doc/liteformats.R |only liteformats-0.2.0/liteformats/inst/doc/liteformats.Rmd |only liteformats-0.2.0/liteformats/inst/doc/liteformats.html |only liteformats-0.2.0/liteformats/inst/doc/resume.R |only liteformats-0.2.0/liteformats/inst/doc/resume.Rmd |only liteformats-0.2.0/liteformats/inst/doc/resume.html |only liteformats-0.2.0/liteformats/inst/doc/typography.R |only liteformats-0.2.0/liteformats/inst/doc/typography.Rmd |only liteformats-0.2.0/liteformats/inst/doc/typography.html |only liteformats-0.2.0/liteformats/inst/doc/workflows.Rmd |only liteformats-0.2.0/liteformats/inst/doc/workflows.html |only liteformats-0.2.0/liteformats/inst/liteformats/css/resume.css | 54 - liteformats-0.2.0/liteformats/inst/liteformats/data |only liteformats-0.2.0/liteformats/inst/liteformats/js/resume.js | 29 liteformats-0.2.0/liteformats/inst/liteformats/licenses/google-font-metadata-LICENSE.md |only liteformats-0.2.0/liteformats/inst/liteformats/skeletons/cover-letter.Rmd | 15 liteformats-0.2.0/liteformats/inst/liteformats/skeletons/resume.Rmd | 8 liteformats-0.2.0/liteformats/inst/liteformats/skeletons/signature.png |only liteformats-0.2.0/liteformats/man/cover_letter.Rd | 71 - liteformats-0.2.0/liteformats/man/cover_letter_options.Rd |only liteformats-0.2.0/liteformats/man/include_graphics.Rd |only liteformats-0.2.0/liteformats/man/liteformats-package.Rd | 1 liteformats-0.2.0/liteformats/man/resume.Rd | 90 - liteformats-0.2.0/liteformats/man/resume_options.Rd |only liteformats-0.2.0/liteformats/man/use_resume.Rd | 4 liteformats-0.2.0/liteformats/tests/testit/test-render.R | 184 +++ liteformats-0.2.0/liteformats/vignettes/config.Rmd |only liteformats-0.2.0/liteformats/vignettes/cover-letter.Rmd |only liteformats-0.2.0/liteformats/vignettes/liteformats.Rmd |only liteformats-0.2.0/liteformats/vignettes/resume.Rmd |only liteformats-0.2.0/liteformats/vignettes/typography.Rmd |only liteformats-0.2.0/liteformats/vignettes/workflows.Rmd |only 52 files changed, 636 insertions(+), 506 deletions(-)
Title: Read Stable Isotope Data Files
Description: Interface to the raw data and metadata stored in the file formats
commonly encountered in scientific disciplines that make use of
stable isotopes. Supports Isodat (.dxf, .cf, .did, .caf, .scn),
IonOS (.iarc), LyticOS (.larc), Callisto (.bch), and Qtegra
(.imexp) file formats. Provides a consistent data structure together
with tools to aggregate, convert signal units, filter, and visualize the
extracted data. The approach is described in Kopf et al. (2021)
<doi:10.21105/joss.02878>.
Author: Sebastian Kopf [aut, cre]
Maintainer: Sebastian Kopf <sebastian.kopf@colorado.edu>
Diff between isoreader2 versions 0.6.1 dated 2026-07-10 and 0.7.0 dated 2026-08-24
isoreader2-0.6.1/isoreader2/man/ir_plot_continuous_flow.Rd |only isoreader2-0.7.0/isoreader2/DESCRIPTION | 10 isoreader2-0.7.0/isoreader2/MD5 | 64 isoreader2-0.7.0/isoreader2/NAMESPACE | 3 isoreader2-0.7.0/isoreader2/NEWS.md | 136 + isoreader2-0.7.0/isoreader2/R/conditions-general.R | 2 isoreader2-0.7.0/isoreader2/R/extract.R | 2 isoreader2-0.7.0/isoreader2/R/formatting.R | 2 isoreader2-0.7.0/isoreader2/R/isoreader2-package.R | 2 isoreader2-0.7.0/isoreader2/R/metadata.R | 281 +++ isoreader2-0.7.0/isoreader2/R/print.R | 8 isoreader2-0.7.0/isoreader2/R/read.R | 2 isoreader2-0.7.0/isoreader2/R/read_isodat.R | 6 isoreader2-0.7.0/isoreader2/R/read_liarc.R | 2 isoreader2-0.7.0/isoreader2/R/read_sercon.R | 2 isoreader2-0.7.0/isoreader2/R/visualization.R | 739 ++++++---- isoreader2-0.7.0/isoreader2/README.md | 55 isoreader2-0.7.0/isoreader2/inst/CITATION |only isoreader2-0.7.0/isoreader2/inst/doc/functionality_guide.R | 64 isoreader2-0.7.0/isoreader2/inst/doc/functionality_guide.Rmd | 111 + isoreader2-0.7.0/isoreader2/inst/doc/functionality_guide.html | 321 ++-- isoreader2-0.7.0/isoreader2/man/auto.Rd | 2 isoreader2-0.7.0/isoreader2/man/figures/README-continuous_flow_example_w_ratios-1.png |binary isoreader2-0.7.0/isoreader2/man/figures/README-dual_inlet_example-1.png |binary isoreader2-0.7.0/isoreader2/man/figures/isoreader2_flowchart.svg | 410 ++++- isoreader2-0.7.0/isoreader2/man/ir_check_isoextract.Rd | 2 isoreader2-0.7.0/isoreader2/man/ir_default_theme.Rd | 4 isoreader2-0.7.0/isoreader2/man/ir_filter_masses.Rd |only isoreader2-0.7.0/isoreader2/man/ir_generate_tibble.Rd | 66 isoreader2-0.7.0/isoreader2/man/ir_plot_dual_inlet.Rd | 64 isoreader2-0.7.0/isoreader2/man/ir_plot_scans.Rd | 64 isoreader2-0.7.0/isoreader2/man/ir_plot_traces.Rd |only isoreader2-0.7.0/isoreader2/tests/testthat/test-metadata.R | 180 ++ isoreader2-0.7.0/isoreader2/tests/testthat/test-visualization.R | 535 +++++-- isoreader2-0.7.0/isoreader2/vignettes/functionality_guide.Rmd | 111 + 35 files changed, 2473 insertions(+), 777 deletions(-)
Title: Decode Draco Format 3D Mesh Data
Description: Decodes meshes and point cloud data encoded by the Draco mesh
compression library from Google. Note that this is only designed for basic
decoding and not intended as a full scale wrapping of the Draco library.
Author: Gregory Jefferis [aut, cre] ,
Google Inc [aut, cph]
Maintainer: Gregory Jefferis <jefferis@gmail.com>
Diff between dracor versions 0.2.6 dated 2023-01-29 and 0.2.7 dated 2026-08-24
DESCRIPTION | 13 +++++++------ MD5 | 14 +++++++------- NEWS.md | 4 ++++ R/dracodecode.R | 6 +++--- README.md | 2 +- man/draco_decode.Rd | 6 +++--- man/dracor-package.Rd | 1 + tests/testthat/test-decode.R | 2 +- 8 files changed, 27 insertions(+), 21 deletions(-)
Title: Extra Functions to Cut, Label and Colour Dendrogram Clusters
Description: Provides extra functions to manipulate dendrograms
that build on the base functions provided by the 'stats' package. The main
functionality it is designed to add is the ability to colour all the edges
in an object of class 'dendrogram' according to cluster membership i.e. each
subtree is coloured, not just the terminal leaves. In addition it provides
some utility functions to cut 'dendrogram' and 'hclust' objects and to
set/get labels.
Author: Gregory Jefferis [aut, cre]
Maintainer: Gregory Jefferis <jefferis@gmail.com>
Diff between dendroextras versions 0.2.3 dated 2018-01-25 and 0.2.4 dated 2026-08-24
DESCRIPTION | 9 +++++---- MD5 | 24 ++++++++++++------------ NAMESPACE | 12 +++++++----- NEWS | 5 +++++ R/colour_clusters.R | 4 ++-- R/dendroextras-package.R | 6 ++---- R/slice.R | 2 +- README.md | 4 ++-- man/colour_clusters.Rd | 4 +--- man/dendroextras-package.Rd | 13 +++++++++++-- man/set_leaf_colours.Rd | 1 - tests/testthat/test-colour-clusters.R | 4 ++-- tests/testthat/test-slice.R | 4 ++-- 13 files changed, 52 insertions(+), 40 deletions(-)
Title: Statistical Functions for the Delaporte Distribution
Description: Provides probability mass, distribution, quantile, random-variate
generation, and method-of-moments parameter-estimation functions for the
Delaporte distribution with parameterization based on Vose (2008)
<isbn:9780470512845>. The Delaporte is a discrete probability distribution
which can be considered the convolution of a negative binomial distribution
with a Poisson distribution. Alternatively, it can be considered a counting
distribution with both Poisson and negative binomial components. It has been
studied in actuarial science as a frequency distribution which has more
variability than the Poisson, but less than the negative binomial.
Author: Avraham Adler [aut, cph, cre]
Maintainer: Avraham Adler <Avraham.Adler@gmail.com>
Diff between Delaporte versions 8.4.3 dated 2026-01-09 and 9.0.0 dated 2026-08-24
Delaporte-8.4.3/Delaporte/src/utils_and_wrappers.c |only Delaporte-9.0.0/Delaporte/DESCRIPTION | 8 Delaporte-9.0.0/Delaporte/MD5 | 46 Delaporte-9.0.0/Delaporte/NAMESPACE | 4 Delaporte-9.0.0/Delaporte/R/Delaporte.R | 96 Delaporte-9.0.0/Delaporte/R/omp.R | 15 Delaporte-9.0.0/Delaporte/R/zzz.R | 35 Delaporte-9.0.0/Delaporte/build/partial.rdb |binary Delaporte-9.0.0/Delaporte/inst/CITATION | 2 Delaporte-9.0.0/Delaporte/inst/NEWS.Rd | 285 + Delaporte-9.0.0/Delaporte/inst/tinytest/test-ddelap.r | 165 + Delaporte-9.0.0/Delaporte/inst/tinytest/test-momdelap.r | 7 Delaporte-9.0.0/Delaporte/inst/tinytest/test-omp.R | 63 Delaporte-9.0.0/Delaporte/inst/tinytest/test-p_and_qdelap.r |only Delaporte-9.0.0/Delaporte/inst/tinytest/test-pdelap.r | 221 + Delaporte-9.0.0/Delaporte/inst/tinytest/test-qdelap.r | 158 - Delaporte-9.0.0/Delaporte/inst/tinytest/test-rdelap.r | 33 Delaporte-9.0.0/Delaporte/man/Delaporte-internal.Rd | 2 Delaporte-9.0.0/Delaporte/man/Delaporte.Rd | 188 - Delaporte-9.0.0/Delaporte/man/omp.Rd | 18 Delaporte-9.0.0/Delaporte/src/Delaporte.h |only Delaporte-9.0.0/Delaporte/src/Delaporte_Fortran.h |only Delaporte-9.0.0/Delaporte/src/Makevars | 4 Delaporte-9.0.0/Delaporte/src/delaporte.f90 | 1874 +++++++++++- Delaporte-9.0.0/Delaporte/src/delaporteC.c |only Delaporte-9.0.0/Delaporte/src/init.c |only Delaporte-9.0.0/Delaporte/src/utils.f90 | 269 + 27 files changed, 3148 insertions(+), 345 deletions(-)
Title: Leveraging Experiment Lines to Data Analytics
Description: The natural increase in the complexity of current research experiments and data demands better tools to enhance productivity in Data Analytics. The package is a framework designed to address the modern challenges in data analytics workflows. The package is inspired by Experiment Line concepts. It aims to provide seamless support for users in developing their data mining workflows by offering a uniform data model and method API. It enables the integration of various data mining activities, including data preprocessing, classification, regression, clustering, and time series prediction. It also offers options for hyper-parameter tuning and supports integration with existing libraries and languages. Overall, the package provides researchers with a comprehensive set of functionalities for data science, promoting ease of use, extensibility, and integration with various tools and libraries. Information on Experiment Line is based on Ogasawara et al. (2009) <doi:10.1007/978-3-642-02279-1_2 [...truncated...]
Author: Eduardo Ogasawara [aut, ths, cre] ,
Ana Carolina Sa [aut],
Antonio Castro [aut],
Caio Santos [aut],
Diego Carvalho [ctb],
Diego Salles [aut],
Eduardo Bezerra [ctb],
Esther Pacitti [ctb],
Fabio Porto [ctb],
Janio Lima [aut],
Lucas Tavares [aut],
Rafae [...truncated...]
Maintainer: Eduardo Ogasawara <eogasawara@ieee.org>
Diff between daltoolbox versions 1.3.767 dated 2026-07-09 and 1.3.777 dated 2026-08-24
DESCRIPTION | 6 - MD5 | 32 ++++-- NAMESPACE | 9 + R/pat_apriori.R | 50 ++++++++-- R/pat_cspade.R | 21 +++- R/pat_dara.R |only R/pat_eclat.R | 21 +++- R/pat_pattern_miner.R | 1 R/pat_rule_filter.R |only R/pat_threshold.R |only README.md | 191 +++++++++++++++++++++++++--------------- man/pat_apriori.Rd | 24 +++-- man/pat_confidence_threshold.Rd |only man/pat_cspade.Rd | 10 +- man/pat_dara.Rd |only man/pat_dara_rules.Rd |only man/pat_eclat.Rd | 10 +- man/pat_filter_rules.Rd |only man/pat_rule_filter_dara.Rd |only man/pat_rule_filter_interest.Rd |only man/pat_rule_filter_none.Rd |only man/pat_rules_tidy.Rd |only man/pat_support_threshold.Rd |only 23 files changed, 257 insertions(+), 118 deletions(-)
Title: Disciplined Convex Optimization
Description: An object-oriented modeling language for disciplined
convex programming (DCP) as described in Fu, Narasimhan, and Boyd
(2020, <doi:10.18637/jss.v094.i14>). It allows the user to
formulate convex optimization problems in a natural way following
mathematical convention and DCP rules. The system analyzes the
problem, verifies its convexity, converts it into a canonical
form, and hands it off to an appropriate solver to obtain the
solution. This version uses the S7 object system for improved
performance and maintainability.
Author: Anqi Fu [aut, cre],
Balasubramanian Narasimhan [aut],
Steven Diamond [aut],
John Miller [aut],
Stephen Boyd [ctb]
Maintainer: Anqi Fu <anqif@alumni.stanford.edu>
Diff between CVXR versions 1.9.1 dated 2026-06-09 and 1.9.2 dated 2026-08-24
CVXR-1.9.1/CVXR/R/013_utilities_bounds.R |only CVXR-1.9.1/CVXR/R/014_settings.R |only CVXR-1.9.1/CVXR/R/015_lin_ops_LinOp.R |only CVXR-1.9.1/CVXR/R/016_lin_ops_LinOpVector.R |only CVXR-1.9.1/CVXR/R/017_lin_ops_RcppExports.R |only CVXR-1.9.1/CVXR/R/018_lin_ops_CVXcanon.R |only CVXR-1.9.1/CVXR/R/019_cvxcore_r_canonInterface.R |only CVXR-1.9.1/CVXR/R/020_zzz_R_specific_rcppUtils.R |only CVXR-1.9.1/CVXR/R/021_zzz_R_specific_sparse_utils.R |only CVXR-1.9.1/CVXR/R/022_zzz_R_specific_coll_utils.R |only CVXR-1.9.1/CVXR/R/023_interface_matrix_utilities.R |only CVXR-1.9.1/CVXR/R/024_lin_ops_lin_utils.R |only CVXR-1.9.1/CVXR/R/025_utilities_canonical.R |only CVXR-1.9.1/CVXR/R/026_expressions_expression.R |only CVXR-1.9.1/CVXR/R/027_expressions_leaf.R |only CVXR-1.9.1/CVXR/R/028_expressions_variable.R |only CVXR-1.9.1/CVXR/R/029_expressions_constants_constant.R |only CVXR-1.9.1/CVXR/R/030_expressions_constants_parameter.R |only CVXR-1.9.1/CVXR/R/031_expressions_constants_callback_param.R |only CVXR-1.9.1/CVXR/R/032_atoms_atom.R |only CVXR-1.9.1/CVXR/R/033_atoms_affine_affine_atom.R |only CVXR-1.9.1/CVXR/R/034_atoms_affine_conj.R |only CVXR-1.9.1/CVXR/R/035_atoms_affine_real.R |only CVXR-1.9.1/CVXR/R/036_atoms_affine_imag.R |only CVXR-1.9.1/CVXR/R/037_atoms_affine_wraps.R |only CVXR-1.9.1/CVXR/R/038_atoms_elementwise_elementwise.R |only CVXR-1.9.1/CVXR/R/039_atoms_axis_atom.R |only CVXR-1.9.1/CVXR/R/040_atoms_affine_axis_aff_atom.R |only CVXR-1.9.1/CVXR/R/041_atoms_affine_promote.R |only CVXR-1.9.1/CVXR/R/042_atoms_affine_unary_operators.R |only CVXR-1.9.1/CVXR/R/043_atoms_affine_add_expr.R |only CVXR-1.9.1/CVXR/R/044_atoms_affine_binary_operators.R |only CVXR-1.9.1/CVXR/R/045_atoms_affine_index.R |only CVXR-1.9.1/CVXR/R/046_atoms_affine_transpose.R |only CVXR-1.9.1/CVXR/R/047_atoms_affine_sum.R |only CVXR-1.9.1/CVXR/R/048_atoms_affine_reshape.R |only CVXR-1.9.1/CVXR/R/049_atoms_affine_diag.R |only CVXR-1.9.1/CVXR/R/050_atoms_affine_trace.R |only CVXR-1.9.1/CVXR/R/051_atoms_affine_partial_trace.R |only CVXR-1.9.1/CVXR/R/052_atoms_affine_partial_transpose.R |only CVXR-1.9.1/CVXR/R/053_atoms_affine_hstack.R |only CVXR-1.9.1/CVXR/R/054_atoms_affine_vstack.R |only CVXR-1.9.1/CVXR/R/055_atoms_affine_kron.R |only CVXR-1.9.1/CVXR/R/056_atoms_affine_upper_tri.R |only CVXR-1.9.1/CVXR/R/057_atoms_affine_conv.R |only CVXR-1.9.1/CVXR/R/058_atoms_affine_cumsum.R |only CVXR-1.9.1/CVXR/R/059_atoms_affine_diff.R |only CVXR-1.9.1/CVXR/R/060_atoms_affine_bmat.R |only CVXR-1.9.1/CVXR/R/061_atoms_elementwise_abs.R |only CVXR-1.9.1/CVXR/R/062_atoms_elementwise_exp.R |only CVXR-1.9.1/CVXR/R/063_atoms_elementwise_log.R |only CVXR-1.9.1/CVXR/R/064_atoms_elementwise_power.R |only CVXR-1.9.1/CVXR/R/065_atoms_elementwise_entr.R |only CVXR-1.9.1/CVXR/R/066_atoms_elementwise_huber.R |only CVXR-1.9.1/CVXR/R/067_atoms_elementwise_maximum.R |only CVXR-1.9.1/CVXR/R/068_atoms_elementwise_minimum.R |only CVXR-1.9.1/CVXR/R/069_atoms_elementwise_kl_div.R |only CVXR-1.9.1/CVXR/R/070_atoms_elementwise_rel_entr.R |only CVXR-1.9.1/CVXR/R/071_atoms_elementwise_log1p.R |only CVXR-1.9.1/CVXR/R/072_atoms_elementwise_xexp.R |only CVXR-1.9.1/CVXR/R/073_atoms_elementwise_logistic.R |only CVXR-1.9.1/CVXR/R/074_atoms_elementwise_square.R |only CVXR-1.9.1/CVXR/R/075_atoms_elementwise_pos.R |only CVXR-1.9.1/CVXR/R/076_atoms_elementwise_neg.R |only CVXR-1.9.1/CVXR/R/077_atoms_elementwise_inv_pos.R |only CVXR-1.9.1/CVXR/R/078_atoms_elementwise_scalene.R |only CVXR-1.9.1/CVXR/R/079_atoms_elementwise_loggamma.R |only CVXR-1.9.1/CVXR/R/080_atoms_elementwise_log_normcdf.R |only CVXR-1.9.1/CVXR/R/081_atoms_elementwise_normcdf.R |only CVXR-1.9.1/CVXR/R/082_atoms_elementwise_trig.R |only CVXR-1.9.1/CVXR/R/083_atoms_elementwise_hyperbolic.R |only CVXR-1.9.1/CVXR/R/084_atoms_elementwise_ceil.R |only CVXR-1.9.1/CVXR/R/085_atoms_elementwise_logic.R |only CVXR-1.9.1/CVXR/R/086_atoms_affine_vec.R |only CVXR-1.9.1/CVXR/R/087_atoms_total_variation.R |only CVXR-1.9.1/CVXR/R/088_atoms_sum_smallest.R |only CVXR-1.9.1/CVXR/R/089_atoms_harmonic_mean.R |only CVXR-1.9.1/CVXR/R/090_atoms_mixed_norm.R |only CVXR-1.9.1/CVXR/R/091_atoms_cvar.R |only CVXR-1.9.1/CVXR/R/092_atoms_ptp.R |only CVXR-1.9.1/CVXR/R/093_atoms_stats.R |only CVXR-1.9.1/CVXR/R/094_atoms_inv_prod.R |only CVXR-1.9.1/CVXR/R/095_zzz_R_specific_convenience.R |only CVXR-1.9.1/CVXR/R/147_reductions_dcp2cone_dcp2cone.R |only CVXR-1.9.1/CVXR/R/148_reductions_dcp2cone_canonicalizers_abs_canon.R |only CVXR-1.9.1/CVXR/R/149_reductions_dcp2cone_canonicalizers_cummax_canon.R |only CVXR-1.9.1/CVXR/R/150_reductions_dcp2cone_canonicalizers_cumsum_canon.R |only CVXR-1.9.1/CVXR/R/151_reductions_dcp2cone_canonicalizers_dotsort_canon.R |only CVXR-1.9.1/CVXR/R/152_reductions_dcp2cone_canonicalizers_max_canon.R |only CVXR-1.9.1/CVXR/R/153_reductions_dcp2cone_canonicalizers_maximum_canon.R |only CVXR-1.9.1/CVXR/R/154_reductions_dcp2cone_canonicalizers_min_canon.R |only CVXR-1.9.1/CVXR/R/155_reductions_dcp2cone_canonicalizers_minimum_canon.R |only CVXR-1.9.1/CVXR/R/156_reductions_dcp2cone_canonicalizers_norm1_canon.R |only CVXR-1.9.1/CVXR/R/157_reductions_dcp2cone_canonicalizers_norm_inf_canon.R |only CVXR-1.9.1/CVXR/R/158_reductions_dcp2cone_canonicalizers_sum_largest_canon.R |only CVXR-1.9.1/CVXR/R/159_reductions_dcp2cone_canonicalizers_entr_canon.R |only CVXR-1.9.1/CVXR/R/160_reductions_dcp2cone_canonicalizers_exp_canon.R |only CVXR-1.9.1/CVXR/R/161_reductions_dcp2cone_canonicalizers_geo_mean_canon.R |only CVXR-1.9.1/CVXR/R/162_reductions_dcp2cone_canonicalizers_huber_canon.R |only CVXR-1.9.1/CVXR/R/163_reductions_dcp2cone_canonicalizers_kl_div_canon.R |only CVXR-1.9.1/CVXR/R/164_reductions_dcp2cone_canonicalizers_lambda_max_canon.R |only CVXR-1.9.1/CVXR/R/165_reductions_dcp2cone_canonicalizers_lambda_sum_largest_canon.R |only CVXR-1.9.1/CVXR/R/166_reductions_dcp2cone_canonicalizers_log_canon.R |only CVXR-1.9.1/CVXR/R/167_reductions_dcp2cone_canonicalizers_log_det_canon.R |only CVXR-1.9.1/CVXR/R/168_reductions_dcp2cone_canonicalizers_log_sum_exp_canon.R |only CVXR-1.9.1/CVXR/R/169_reductions_dcp2cone_canonicalizers_log1p_canon.R |only CVXR-1.9.1/CVXR/R/170_reductions_dcp2cone_canonicalizers_logistic_canon.R |only CVXR-1.9.1/CVXR/R/171_reductions_dcp2cone_canonicalizers_matrix_frac_canon.R |only CVXR-1.9.1/CVXR/R/172_reductions_dcp2cone_canonicalizers_normNuc_canon.R |only CVXR-1.9.1/CVXR/R/173_reductions_dcp2cone_canonicalizers_pnorm_canon.R |only CVXR-1.9.1/CVXR/R/174_reductions_dcp2cone_canonicalizers_power_canon.R |only CVXR-1.9.1/CVXR/R/175_reductions_dcp2cone_canonicalizers_quad_form_canon.R |only CVXR-1.9.1/CVXR/R/176_reductions_dcp2cone_canonicalizers_quad_over_lin_canon.R |only CVXR-1.9.1/CVXR/R/177_reductions_dcp2cone_canonicalizers_rel_entr_canon.R |only CVXR-1.9.1/CVXR/R/178_reductions_dcp2cone_canonicalizers_sigma_max_canon.R |only CVXR-1.9.1/CVXR/R/179_reductions_dcp2cone_canonicalizers_tr_inv_canon.R |only CVXR-1.9.1/CVXR/R/180_reductions_dcp2cone_canonicalizers_xexp_canon.R |only CVXR-1.9.1/CVXR/R/181_reductions_dcp2cone_canonicalizers_perspective_canon.R |only CVXR-1.9.1/CVXR/R/182_reductions_dcp2cone_canonicalizers_logic_canon.R |only CVXR-1.9.1/CVXR/R/183_reductions_dcp2cone_canonicalizers_indicator_canon.R |only CVXR-1.9.1/CVXR/R/184_reductions_dcp2cone_canonicalizers_quad_huber_canon.R |only CVXR-1.9.1/CVXR/R/185_reductions_dcp2cone_canonicalizers_quad_power_canon.R |only CVXR-1.9.1/CVXR/R/186_reductions_dcp2cone_canonicalizers_quad_quad_form_canon.R |only CVXR-1.9.1/CVXR/R/187_reductions_dcp2cone_canonicalizers_quad_quad_over_lin_canon.R |only CVXR-1.9.1/CVXR/R/188_reductions_solution.R |only CVXR-1.9.1/CVXR/R/189_reductions_utilities.R |only CVXR-1.9.1/CVXR/R/190_reductions_chain.R |only CVXR-1.9.1/CVXR/R/191_reductions_complex2real_canonicalizers_constant_canon.R |only CVXR-1.9.1/CVXR/R/192_reductions_complex2real_canonicalizers_param_canon.R |only CVXR-1.9.1/CVXR/R/193_reductions_complex2real_canonicalizers_variable_canon.R |only CVXR-1.9.1/CVXR/R/194_reductions_complex2real_canonicalizers_aff_canon.R |only CVXR-1.9.1/CVXR/R/195_reductions_complex2real_canonicalizers_abs_canon.R |only CVXR-1.9.1/CVXR/R/196_reductions_complex2real_canonicalizers_pnorm_canon.R |only CVXR-1.9.1/CVXR/R/197_reductions_complex2real_canonicalizers_matrix_canon.R |only CVXR-1.9.1/CVXR/R/198_reductions_complex2real_canonicalizers_psd_canon.R |only CVXR-1.9.1/CVXR/R/199_reductions_complex2real_canonicalizers_soc_canon.R |only CVXR-1.9.1/CVXR/R/200_reductions_complex2real_canonicalizers_equality_canon.R |only CVXR-1.9.1/CVXR/R/201_reductions_complex2real_canonicalizers_inequality_canon.R |only CVXR-1.9.1/CVXR/R/202_reductions_complex2real_complex2real.R |only CVXR-1.9.1/CVXR/R/203_reductions_dgp2dcp_util.R |only CVXR-1.9.1/CVXR/R/204_reductions_dgp2dcp_canonicalizers_constant_canon.R |only CVXR-1.9.1/CVXR/R/205_reductions_dgp2dcp_canonicalizers_add_canon.R |only CVXR-1.9.1/CVXR/R/206_reductions_dgp2dcp_canonicalizers_div_canon.R |only CVXR-1.9.1/CVXR/R/207_reductions_dgp2dcp_canonicalizers_mul_canon.R |only CVXR-1.9.1/CVXR/R/208_reductions_dgp2dcp_canonicalizers_mulexpression_canon.R |only CVXR-1.9.1/CVXR/R/209_reductions_dgp2dcp_canonicalizers_power_canon.R |only CVXR-1.9.1/CVXR/R/210_reductions_dgp2dcp_canonicalizers_sum_canon.R |only CVXR-1.9.1/CVXR/R/211_reductions_dgp2dcp_canonicalizers_exp_canon.R |only CVXR-1.9.1/CVXR/R/212_reductions_dgp2dcp_canonicalizers_log_canon.R |only CVXR-1.9.1/CVXR/R/213_reductions_dgp2dcp_canonicalizers_prod_canon.R |only CVXR-1.9.1/CVXR/R/214_reductions_dgp2dcp_canonicalizers_trace_canon.R |only CVXR-1.9.1/CVXR/R/215_reductions_dgp2dcp_canonicalizers_pnorm_canon.R |only CVXR-1.9.1/CVXR/R/216_reductions_dgp2dcp_canonicalizers_norm1_canon.R |only CVXR-1.9.1/CVXR/R/217_reductions_dgp2dcp_canonicalizers_norm_inf_canon.R |only CVXR-1.9.1/CVXR/R/218_reductions_dgp2dcp_canonicalizers_geo_mean_canon.R |only CVXR-1.9.1/CVXR/R/219_reductions_dgp2dcp_canonicalizers_quad_form_canon.R |only CVXR-1.9.1/CVXR/R/220_reductions_dgp2dcp_canonicalizers_quad_over_lin_canon.R |only CVXR-1.9.1/CVXR/R/221_reductions_dgp2dcp_canonicalizers_xexp_canon.R |only CVXR-1.9.1/CVXR/R/222_reductions_dgp2dcp_canonicalizers_cumprod_canon.R |only CVXR-1.9.1/CVXR/R/223_reductions_dgp2dcp_canonicalizers_one_minus_pos_canon.R |only CVXR-1.9.1/CVXR/R/224_reductions_dgp2dcp_canonicalizers_eye_minus_inv_canon.R |only CVXR-1.9.1/CVXR/R/225_reductions_dgp2dcp_canonicalizers_pf_eigenvalue_canon.R |only CVXR-1.9.1/CVXR/R/226_reductions_dgp2dcp_canonicalizers_gmatmul_canon.R |only CVXR-1.9.1/CVXR/R/227_reductions_dgp2dcp_canonicalizers_dgp_canonicalizers.R |only CVXR-1.9.1/CVXR/R/228_reductions_dgp2dcp_canonicalizers_finite_set_canon.R |only CVXR-1.9.1/CVXR/R/229_reductions_dgp2dcp_dgp2dcp.R |only CVXR-1.9.1/CVXR/R/230_reductions_dnlp2smooth_canonicalizers_common_smooth_canons.R |only CVXR-1.9.1/CVXR/R/231_reductions_dnlp2smooth_canonicalizers_div_canon.R |only CVXR-1.9.1/CVXR/R/232_reductions_dnlp2smooth_canonicalizers_power_canon.R |only CVXR-1.9.1/CVXR/R/233_reductions_dnlp2smooth_canonicalizers_quad_over_lin_canon.R |only CVXR-1.9.1/CVXR/R/234_reductions_dnlp2smooth_canonicalizers_pnorm_canon.R |only CVXR-1.9.1/CVXR/R/235_reductions_dnlp2smooth_canonicalizers_geo_mean_canon.R |only CVXR-1.9.1/CVXR/R/236_reductions_dnlp2smooth_canonicalizers_rel_entr_canon.R |only CVXR-1.9.1/CVXR/R/237_reductions_dnlp2smooth_canonicalizers_kl_div_canon.R |only CVXR-1.9.1/CVXR/R/238_reductions_dnlp2smooth_canonicalizers_huber_canon.R |only CVXR-1.9.1/CVXR/R/239_reductions_dnlp2smooth_canonicalizers_log_sum_exp_canon.R |only CVXR-1.9.1/CVXR/R/240_reductions_dnlp2smooth_canonicalizers_smooth_canonicalizers.R |only CVXR-1.9.1/CVXR/R/241_reductions_dnlp2smooth_dnlp2smooth.R |only CVXR-1.9.1/CVXR/R/242_reductions_solvers_nlp_solvers_diff_engine_helpers.R |only CVXR-1.9.1/CVXR/R/243_reductions_solvers_nlp_solvers_diff_engine_converters.R |only CVXR-1.9.1/CVXR/R/244_reductions_solvers_nlp_solvers_diff_engine_registry.R |only CVXR-1.9.1/CVXR/R/245_reductions_solvers_nlp_solvers_diff_engine_c_problem.R |only CVXR-1.9.1/CVXR/R/246_reductions_dqcp2dcp_inverse.R |only CVXR-1.9.1/CVXR/R/247_reductions_dqcp2dcp_sets.R |only CVXR-1.9.1/CVXR/R/248_reductions_dqcp2dcp_tighten.R |only CVXR-1.9.1/CVXR/R/249_reductions_dqcp2dcp_dqcp2dcp.R |only CVXR-1.9.1/CVXR/R/250_reductions_discrete2mixedint_valinvec2mixedint.R |only CVXR-1.9.1/CVXR/R/251_transforms_partial_optimize.R |only CVXR-1.9.1/CVXR/R/252_transforms_scalarize.R |only CVXR-1.9.1/CVXR/R/253_reductions_solvers_bisection.R |only CVXR-1.9.1/CVXR/R/254_utilities_replace_quad_forms.R |only CVXR-1.9.1/CVXR/R/255_utilities_coeff_extractor.R |only CVXR-1.9.1/CVXR/R/256_utilities_perspective_utils.R |only CVXR-1.9.1/CVXR/R/257_reductions_dcp2cone_cone_matrix_stuffing.R |only CVXR-1.9.1/CVXR/R/258_reductions_cvx_attr2constr.R |only CVXR-1.9.1/CVXR/R/259_reductions_solvers_utilities.R |only CVXR-1.9.1/CVXR/R/260_reductions_solvers_solver.R |only CVXR-1.9.1/CVXR/R/261_reductions_solvers_nlp_solvers_nlp_solver.R |only CVXR-1.9.1/CVXR/R/262_reductions_solvers_nlp_solvers_uno_nlpif.R |only CVXR-1.9.1/CVXR/R/263_reductions_solvers_nlp_solvers_ipopt_nlpif.R |only CVXR-1.9.1/CVXR/R/264_reductions_solvers_nlp_solvers_knitro_nlpif.R |only CVXR-1.9.1/CVXR/R/265_reductions_solvers_nlp_solvers_copt_nlpif.R |only CVXR-1.9.1/CVXR/R/266_reductions_solvers_defines.R |only CVXR-1.9.1/CVXR/R/267_reductions_solvers_constant_solver.R |only CVXR-1.9.1/CVXR/R/268_reductions_solvers_qp_solvers_qp_solver.R |only CVXR-1.9.1/CVXR/R/269_reductions_solvers_conic_solvers_conic_solver.R |only CVXR-1.9.1/CVXR/R/270_reductions_solvers_conic_solvers_scs_conif.R |only CVXR-1.9.1/CVXR/R/271_reductions_solvers_conic_solvers_clarabel_conif.R |only CVXR-1.9.1/CVXR/R/272_reductions_solvers_conic_solvers_diffcp_conif.R |only CVXR-1.9.1/CVXR/R/273_reductions_solvers_conic_solvers_mosek_conif.R |only CVXR-1.9.1/CVXR/R/274_reductions_solvers_conic_solvers_gurobi_conif.R |only CVXR-1.9.1/CVXR/R/275_reductions_solvers_conic_solvers_cplex_conif.R |only CVXR-1.9.1/CVXR/R/276_reductions_solvers_conic_solvers_highs_conif.R |only CVXR-1.9.1/CVXR/R/277_reductions_solvers_conic_solvers_glpk_conif.R |only CVXR-1.9.1/CVXR/R/278_reductions_solvers_conic_solvers_glpk_mi_conif.R |only CVXR-1.9.1/CVXR/R/279_reductions_solvers_conic_solvers_ecos_conif.R |only CVXR-1.9.1/CVXR/R/280_reductions_solvers_conic_solvers_ecos_bb_conif.R |only CVXR-1.9.1/CVXR/R/281_reductions_solvers_conic_solvers_cvxopt_conif.R |only CVXR-1.9.1/CVXR/R/282_reductions_solvers_conic_solvers_scip_conif.R |only CVXR-1.9.1/CVXR/R/283_reductions_solvers_conic_solvers_xpress_conif.R |only CVXR-1.9.1/CVXR/R/284_reductions_solvers_qp_solvers_osqp_qpif.R |only CVXR-1.9.1/CVXR/R/285_reductions_solvers_qp_solvers_highs_qpif.R |only CVXR-1.9.1/CVXR/R/286_reductions_solvers_qp_solvers_gurobi_qpif.R |only CVXR-1.9.1/CVXR/R/287_reductions_solvers_qp_solvers_cplex_qpif.R |only CVXR-1.9.1/CVXR/R/288_reductions_solvers_qp_solvers_piqp_qpif.R |only CVXR-1.9.1/CVXR/R/289_reductions_solvers_qp_solvers_xpress_qpif.R |only CVXR-1.9.1/CVXR/R/290_reductions_solvers_solving_chain.R |only CVXR-1.9.1/CVXR/R/291_reductions_solvers_nlp_solving_chain.R |only CVXR-1.9.1/CVXR/R/292_zzz_R_specific_visualize_annotations.R |only CVXR-1.9.1/CVXR/R/293_zzz_R_specific_visualize_html.R |only CVXR-1.9.1/CVXR/R/294_zzz_R_specific_visualize.R |only CVXR-1.9.1/CVXR/R/295_zzz_R_specific_to_latex.R |only CVXR-1.9.1/CVXR/R/296_zzz_R_specific_solver_opts.R |only CVXR-1.9.1/CVXR/R/297_zzz_R_specific_exports.R |only CVXR-1.9.1/CVXR/R/298_zzz_R_specific_math_atoms.R |only CVXR-1.9.1/CVXR/R/299_zzz_R_specific_masking.R |only CVXR-1.9.1/CVXR/R/300_zzz_R_specific_aliases.R |only CVXR-1.9.1/CVXR/R/301_zzz_R_specific_data.R |only CVXR-1.9.1/CVXR/R/302_zzz_R_specific_grad_delta_attrs.R |only CVXR-1.9.2/CVXR/DESCRIPTION | 12 CVXR-1.9.2/CVXR/MD5 | 842 +++++----- CVXR-1.9.2/CVXR/NAMESPACE | 57 CVXR-1.9.2/CVXR/NEWS.md | 166 + CVXR-1.9.2/CVXR/R/002_zzz_R_specific_globals.R | 5 CVXR-1.9.2/CVXR/R/003_zzz_R_specific_s7_dispatch_perf.R | 1 CVXR-1.9.2/CVXR/R/005_zzz_R_specific_generics.R | 3 CVXR-1.9.2/CVXR/R/006_zzz_R_specific_utility.R | 183 +- CVXR-1.9.2/CVXR/R/010_utilities_power_tools.R | 15 CVXR-1.9.2/CVXR/R/011_utilities_grad.R | 2 CVXR-1.9.2/CVXR/R/012_utilities_solver_context.R | 18 CVXR-1.9.2/CVXR/R/013_utilities_psd_utils.R |only CVXR-1.9.2/CVXR/R/014_utilities_bounds.R |only CVXR-1.9.2/CVXR/R/015_settings.R |only CVXR-1.9.2/CVXR/R/016_lin_ops_LinOp.R |only CVXR-1.9.2/CVXR/R/017_lin_ops_LinOpVector.R |only CVXR-1.9.2/CVXR/R/018_lin_ops_RcppExports.R |only CVXR-1.9.2/CVXR/R/019_lin_ops_CVXcanon.R |only CVXR-1.9.2/CVXR/R/020_cvxcore_r_canonInterface.R |only CVXR-1.9.2/CVXR/R/021_zzz_R_specific_rcppUtils.R |only CVXR-1.9.2/CVXR/R/022_zzz_R_specific_sparse_utils.R |only CVXR-1.9.2/CVXR/R/023_zzz_R_specific_coll_utils.R |only CVXR-1.9.2/CVXR/R/024_interface_matrix_utilities.R |only CVXR-1.9.2/CVXR/R/025_lin_ops_lin_utils.R |only CVXR-1.9.2/CVXR/R/026_utilities_canonical.R |only CVXR-1.9.2/CVXR/R/027_expressions_expression.R |only CVXR-1.9.2/CVXR/R/028_expressions_leaf.R |only CVXR-1.9.2/CVXR/R/029_expressions_variable.R |only CVXR-1.9.2/CVXR/R/030_expressions_constants_constant.R |only CVXR-1.9.2/CVXR/R/031_expressions_constants_parameter.R |only CVXR-1.9.2/CVXR/R/032_expressions_constants_callback_param.R |only CVXR-1.9.2/CVXR/R/033_atoms_atom.R |only CVXR-1.9.2/CVXR/R/034_atoms_affine_affine_atom.R |only CVXR-1.9.2/CVXR/R/035_atoms_affine_conj.R |only CVXR-1.9.2/CVXR/R/036_atoms_affine_real.R |only CVXR-1.9.2/CVXR/R/037_atoms_affine_imag.R |only CVXR-1.9.2/CVXR/R/038_atoms_affine_wraps.R |only CVXR-1.9.2/CVXR/R/039_atoms_elementwise_elementwise.R |only CVXR-1.9.2/CVXR/R/040_atoms_axis_atom.R |only CVXR-1.9.2/CVXR/R/041_atoms_affine_axis_aff_atom.R |only CVXR-1.9.2/CVXR/R/042_atoms_affine_promote.R |only CVXR-1.9.2/CVXR/R/043_atoms_affine_unary_operators.R |only CVXR-1.9.2/CVXR/R/044_atoms_affine_add_expr.R |only CVXR-1.9.2/CVXR/R/045_atoms_affine_binary_operators.R |only CVXR-1.9.2/CVXR/R/046_atoms_affine_index.R |only CVXR-1.9.2/CVXR/R/047_atoms_affine_transpose.R |only CVXR-1.9.2/CVXR/R/048_atoms_affine_sum.R |only CVXR-1.9.2/CVXR/R/049_atoms_affine_reshape.R |only CVXR-1.9.2/CVXR/R/050_atoms_affine_diag.R |only CVXR-1.9.2/CVXR/R/051_atoms_affine_trace.R |only CVXR-1.9.2/CVXR/R/052_atoms_affine_partial_trace.R |only CVXR-1.9.2/CVXR/R/053_atoms_affine_partial_transpose.R |only CVXR-1.9.2/CVXR/R/054_atoms_affine_hstack.R |only CVXR-1.9.2/CVXR/R/055_atoms_affine_vstack.R |only CVXR-1.9.2/CVXR/R/056_atoms_affine_kron.R |only CVXR-1.9.2/CVXR/R/057_atoms_affine_upper_tri.R |only CVXR-1.9.2/CVXR/R/058_atoms_affine_conv.R |only CVXR-1.9.2/CVXR/R/059_atoms_affine_cumsum.R |only CVXR-1.9.2/CVXR/R/060_atoms_affine_diff.R |only CVXR-1.9.2/CVXR/R/061_atoms_affine_bmat.R |only CVXR-1.9.2/CVXR/R/062_atoms_elementwise_abs.R |only CVXR-1.9.2/CVXR/R/063_atoms_elementwise_exp.R |only CVXR-1.9.2/CVXR/R/064_atoms_elementwise_log.R |only CVXR-1.9.2/CVXR/R/065_atoms_elementwise_power.R |only CVXR-1.9.2/CVXR/R/066_atoms_elementwise_entr.R |only CVXR-1.9.2/CVXR/R/067_atoms_elementwise_huber.R |only CVXR-1.9.2/CVXR/R/068_atoms_elementwise_maximum.R |only CVXR-1.9.2/CVXR/R/069_atoms_elementwise_minimum.R |only CVXR-1.9.2/CVXR/R/070_atoms_elementwise_kl_div.R |only CVXR-1.9.2/CVXR/R/071_atoms_elementwise_rel_entr.R |only CVXR-1.9.2/CVXR/R/072_atoms_elementwise_log1p.R |only CVXR-1.9.2/CVXR/R/073_atoms_elementwise_xexp.R |only CVXR-1.9.2/CVXR/R/074_atoms_elementwise_logistic.R |only CVXR-1.9.2/CVXR/R/075_atoms_elementwise_square.R |only CVXR-1.9.2/CVXR/R/076_atoms_elementwise_pos.R |only CVXR-1.9.2/CVXR/R/077_atoms_elementwise_neg.R |only CVXR-1.9.2/CVXR/R/078_atoms_elementwise_inv_pos.R |only CVXR-1.9.2/CVXR/R/079_atoms_elementwise_scalene.R |only CVXR-1.9.2/CVXR/R/080_atoms_elementwise_loggamma.R |only CVXR-1.9.2/CVXR/R/081_atoms_elementwise_log_normcdf.R |only CVXR-1.9.2/CVXR/R/082_atoms_elementwise_normcdf.R |only CVXR-1.9.2/CVXR/R/083_atoms_elementwise_trig.R |only CVXR-1.9.2/CVXR/R/084_atoms_elementwise_hyperbolic.R |only CVXR-1.9.2/CVXR/R/085_atoms_elementwise_ceil.R |only CVXR-1.9.2/CVXR/R/086_atoms_elementwise_logic.R |only CVXR-1.9.2/CVXR/R/087_atoms_affine_vec.R |only CVXR-1.9.2/CVXR/R/088_atoms_total_variation.R |only CVXR-1.9.2/CVXR/R/089_atoms_sum_smallest.R |only CVXR-1.9.2/CVXR/R/090_atoms_harmonic_mean.R |only CVXR-1.9.2/CVXR/R/091_atoms_mixed_norm.R |only CVXR-1.9.2/CVXR/R/092_atoms_cvar.R |only CVXR-1.9.2/CVXR/R/093_atoms_ptp.R |only CVXR-1.9.2/CVXR/R/094_atoms_stats.R |only CVXR-1.9.2/CVXR/R/095_atoms_inv_prod.R |only CVXR-1.9.2/CVXR/R/096_atoms_norm1.R | 21 CVXR-1.9.2/CVXR/R/097_atoms_norm_inf.R | 14 CVXR-1.9.2/CVXR/R/098_atoms_pnorm.R | 14 CVXR-1.9.2/CVXR/R/099_atoms_max.R | 14 CVXR-1.9.2/CVXR/R/100_atoms_min.R | 14 CVXR-1.9.2/CVXR/R/102_atoms_geo_mean.R | 12 CVXR-1.9.2/CVXR/R/103_atoms_quad_form.R | 34 CVXR-1.9.2/CVXR/R/104_atoms_symbolic_quad_form.R | 2 CVXR-1.9.2/CVXR/R/105_atoms_quad_over_lin.R | 22 CVXR-1.9.2/CVXR/R/106_atoms_log_sum_exp.R | 6 CVXR-1.9.2/CVXR/R/107_atoms_sum_largest.R | 12 CVXR-1.9.2/CVXR/R/108_atoms_lambda_max.R | 6 CVXR-1.9.2/CVXR/R/109_atoms_sigma_max.R | 6 CVXR-1.9.2/CVXR/R/110_atoms_norm_nuc.R | 6 CVXR-1.9.2/CVXR/R/111_atoms_matrix_frac.R | 110 + CVXR-1.9.2/CVXR/R/112_atoms_tr_inv.R | 8 CVXR-1.9.2/CVXR/R/113_atoms_lambda_sum_largest.R | 4 CVXR-1.9.2/CVXR/R/114_atoms_log_det.R | 8 CVXR-1.9.2/CVXR/R/115_atoms_cummax.R | 8 CVXR-1.9.2/CVXR/R/116_atoms_dotsort.R | 16 CVXR-1.9.2/CVXR/R/117_atoms_prod.R | 6 CVXR-1.9.2/CVXR/R/118_atoms_cumprod.R | 4 CVXR-1.9.2/CVXR/R/119_atoms_one_minus_pos.R | 8 CVXR-1.9.2/CVXR/R/120_atoms_eye_minus_inv.R | 10 CVXR-1.9.2/CVXR/R/121_atoms_pf_eigenvalue.R | 4 CVXR-1.9.2/CVXR/R/122_atoms_gmatmul.R | 10 CVXR-1.9.2/CVXR/R/123_atoms_perspective.R | 12 CVXR-1.9.2/CVXR/R/124_atoms_length.R | 6 CVXR-1.9.2/CVXR/R/125_atoms_condition_number.R | 6 CVXR-1.9.2/CVXR/R/126_atoms_gen_lambda_max.R | 14 CVXR-1.9.2/CVXR/R/128_atoms_sign.R | 12 CVXR-1.9.2/CVXR/R/129_zzz_R_specific_operators.R | 14 CVXR-1.9.2/CVXR/R/135_constraints_psd.R | 87 - CVXR-1.9.2/CVXR/R/136_constraints_exponential.R | 7 CVXR-1.9.2/CVXR/R/137_constraints_power.R | 30 CVXR-1.9.2/CVXR/R/140_problems_objective.R | 80 CVXR-1.9.2/CVXR/R/141_problems_problem.R | 149 + CVXR-1.9.2/CVXR/R/142_problems_param_prob.R | 50 CVXR-1.9.2/CVXR/R/143_reductions_reduction.R | 8 CVXR-1.9.2/CVXR/R/144_reductions_eval_params.R | 16 CVXR-1.9.2/CVXR/R/145_reductions_flip_objective.R | 2 CVXR-1.9.2/CVXR/R/146_reductions_canonicalization.R | 50 CVXR-1.9.2/CVXR/R/147_reductions_subexpr_cache.R |only CVXR-1.9.2/CVXR/R/148_reductions_dcp2cone_dcp2cone.R |only CVXR-1.9.2/CVXR/R/149_reductions_dcp2cone_canonicalizers_abs_canon.R |only CVXR-1.9.2/CVXR/R/150_reductions_dcp2cone_canonicalizers_cummax_canon.R |only CVXR-1.9.2/CVXR/R/151_reductions_dcp2cone_canonicalizers_cumsum_canon.R |only CVXR-1.9.2/CVXR/R/152_reductions_dcp2cone_canonicalizers_dotsort_canon.R |only CVXR-1.9.2/CVXR/R/153_reductions_dcp2cone_canonicalizers_max_canon.R |only CVXR-1.9.2/CVXR/R/154_reductions_dcp2cone_canonicalizers_maximum_canon.R |only CVXR-1.9.2/CVXR/R/155_reductions_dcp2cone_canonicalizers_min_canon.R |only CVXR-1.9.2/CVXR/R/156_reductions_dcp2cone_canonicalizers_minimum_canon.R |only CVXR-1.9.2/CVXR/R/157_reductions_dcp2cone_canonicalizers_norm1_canon.R |only CVXR-1.9.2/CVXR/R/158_reductions_dcp2cone_canonicalizers_norm_inf_canon.R |only CVXR-1.9.2/CVXR/R/159_reductions_dcp2cone_canonicalizers_sum_largest_canon.R |only CVXR-1.9.2/CVXR/R/160_reductions_dcp2cone_canonicalizers_entr_canon.R |only CVXR-1.9.2/CVXR/R/161_reductions_dcp2cone_canonicalizers_exp_canon.R |only CVXR-1.9.2/CVXR/R/162_reductions_dcp2cone_canonicalizers_geo_mean_canon.R |only CVXR-1.9.2/CVXR/R/163_reductions_dcp2cone_canonicalizers_huber_canon.R |only CVXR-1.9.2/CVXR/R/164_reductions_dcp2cone_canonicalizers_kl_div_canon.R |only CVXR-1.9.2/CVXR/R/165_reductions_dcp2cone_canonicalizers_lambda_max_canon.R |only CVXR-1.9.2/CVXR/R/166_reductions_dcp2cone_canonicalizers_lambda_sum_largest_canon.R |only CVXR-1.9.2/CVXR/R/167_reductions_dcp2cone_canonicalizers_log_canon.R |only CVXR-1.9.2/CVXR/R/168_reductions_dcp2cone_canonicalizers_log_det_canon.R |only CVXR-1.9.2/CVXR/R/169_reductions_dcp2cone_canonicalizers_log_sum_exp_canon.R |only CVXR-1.9.2/CVXR/R/170_reductions_dcp2cone_canonicalizers_log1p_canon.R |only CVXR-1.9.2/CVXR/R/171_reductions_dcp2cone_canonicalizers_logistic_canon.R |only CVXR-1.9.2/CVXR/R/172_reductions_dcp2cone_canonicalizers_matrix_frac_canon.R |only CVXR-1.9.2/CVXR/R/173_reductions_dcp2cone_canonicalizers_normNuc_canon.R |only CVXR-1.9.2/CVXR/R/174_reductions_dcp2cone_canonicalizers_pnorm_canon.R |only CVXR-1.9.2/CVXR/R/175_reductions_dcp2cone_canonicalizers_power_canon.R |only CVXR-1.9.2/CVXR/R/176_reductions_dcp2cone_canonicalizers_quad_form_canon.R |only CVXR-1.9.2/CVXR/R/177_reductions_dcp2cone_canonicalizers_quad_over_lin_canon.R |only CVXR-1.9.2/CVXR/R/178_reductions_dcp2cone_canonicalizers_rel_entr_canon.R |only CVXR-1.9.2/CVXR/R/179_reductions_dcp2cone_canonicalizers_sigma_max_canon.R |only CVXR-1.9.2/CVXR/R/180_reductions_dcp2cone_canonicalizers_tr_inv_canon.R |only CVXR-1.9.2/CVXR/R/181_reductions_dcp2cone_canonicalizers_xexp_canon.R |only CVXR-1.9.2/CVXR/R/182_reductions_dcp2cone_canonicalizers_perspective_canon.R |only CVXR-1.9.2/CVXR/R/183_reductions_dcp2cone_canonicalizers_logic_canon.R |only CVXR-1.9.2/CVXR/R/184_reductions_dcp2cone_canonicalizers_indicator_canon.R |only CVXR-1.9.2/CVXR/R/185_reductions_dcp2cone_canonicalizers_quad_huber_canon.R |only CVXR-1.9.2/CVXR/R/186_reductions_dcp2cone_canonicalizers_quad_power_canon.R |only CVXR-1.9.2/CVXR/R/187_reductions_dcp2cone_canonicalizers_quad_quad_form_canon.R |only CVXR-1.9.2/CVXR/R/188_reductions_dcp2cone_canonicalizers_quad_quad_over_lin_canon.R |only CVXR-1.9.2/CVXR/R/189_reductions_solution.R |only CVXR-1.9.2/CVXR/R/190_reductions_utilities.R |only CVXR-1.9.2/CVXR/R/191_reductions_chain.R |only CVXR-1.9.2/CVXR/R/192_reductions_complex2real_canonicalizers_constant_canon.R |only CVXR-1.9.2/CVXR/R/193_reductions_complex2real_canonicalizers_param_canon.R |only CVXR-1.9.2/CVXR/R/194_reductions_complex2real_canonicalizers_variable_canon.R |only CVXR-1.9.2/CVXR/R/195_reductions_complex2real_canonicalizers_aff_canon.R |only CVXR-1.9.2/CVXR/R/196_reductions_complex2real_canonicalizers_abs_canon.R |only CVXR-1.9.2/CVXR/R/197_reductions_complex2real_canonicalizers_pnorm_canon.R |only CVXR-1.9.2/CVXR/R/198_reductions_complex2real_canonicalizers_matrix_canon.R |only CVXR-1.9.2/CVXR/R/199_reductions_complex2real_canonicalizers_psd_canon.R |only CVXR-1.9.2/CVXR/R/200_reductions_complex2real_canonicalizers_soc_canon.R |only CVXR-1.9.2/CVXR/R/201_reductions_complex2real_canonicalizers_equality_canon.R |only CVXR-1.9.2/CVXR/R/202_reductions_complex2real_canonicalizers_inequality_canon.R |only CVXR-1.9.2/CVXR/R/203_reductions_complex2real_complex2real.R |only CVXR-1.9.2/CVXR/R/204_reductions_dgp2dcp_util.R |only CVXR-1.9.2/CVXR/R/205_reductions_dgp2dcp_canonicalizers_constant_canon.R |only CVXR-1.9.2/CVXR/R/206_reductions_dgp2dcp_canonicalizers_add_canon.R |only CVXR-1.9.2/CVXR/R/207_reductions_dgp2dcp_canonicalizers_div_canon.R |only CVXR-1.9.2/CVXR/R/208_reductions_dgp2dcp_canonicalizers_mul_canon.R |only CVXR-1.9.2/CVXR/R/209_reductions_dgp2dcp_canonicalizers_mulexpression_canon.R |only CVXR-1.9.2/CVXR/R/210_reductions_dgp2dcp_canonicalizers_power_canon.R |only CVXR-1.9.2/CVXR/R/211_reductions_dgp2dcp_canonicalizers_sum_canon.R |only CVXR-1.9.2/CVXR/R/212_reductions_dgp2dcp_canonicalizers_exp_canon.R |only CVXR-1.9.2/CVXR/R/213_reductions_dgp2dcp_canonicalizers_log_canon.R |only CVXR-1.9.2/CVXR/R/214_reductions_dgp2dcp_canonicalizers_prod_canon.R |only CVXR-1.9.2/CVXR/R/215_reductions_dgp2dcp_canonicalizers_trace_canon.R |only CVXR-1.9.2/CVXR/R/216_reductions_dgp2dcp_canonicalizers_pnorm_canon.R |only CVXR-1.9.2/CVXR/R/217_reductions_dgp2dcp_canonicalizers_norm1_canon.R |only CVXR-1.9.2/CVXR/R/218_reductions_dgp2dcp_canonicalizers_norm_inf_canon.R |only CVXR-1.9.2/CVXR/R/219_reductions_dgp2dcp_canonicalizers_geo_mean_canon.R |only CVXR-1.9.2/CVXR/R/220_reductions_dgp2dcp_canonicalizers_quad_form_canon.R |only CVXR-1.9.2/CVXR/R/221_reductions_dgp2dcp_canonicalizers_quad_over_lin_canon.R |only CVXR-1.9.2/CVXR/R/222_reductions_dgp2dcp_canonicalizers_xexp_canon.R |only CVXR-1.9.2/CVXR/R/223_reductions_dgp2dcp_canonicalizers_cumprod_canon.R |only CVXR-1.9.2/CVXR/R/224_reductions_dgp2dcp_canonicalizers_one_minus_pos_canon.R |only CVXR-1.9.2/CVXR/R/225_reductions_dgp2dcp_canonicalizers_eye_minus_inv_canon.R |only CVXR-1.9.2/CVXR/R/226_reductions_dgp2dcp_canonicalizers_pf_eigenvalue_canon.R |only CVXR-1.9.2/CVXR/R/227_reductions_dgp2dcp_canonicalizers_gmatmul_canon.R |only CVXR-1.9.2/CVXR/R/228_reductions_dgp2dcp_canonicalizers_dgp_canonicalizers.R |only CVXR-1.9.2/CVXR/R/229_reductions_dgp2dcp_canonicalizers_finite_set_canon.R |only CVXR-1.9.2/CVXR/R/230_reductions_dgp2dcp_dgp2dcp.R |only CVXR-1.9.2/CVXR/R/231_reductions_dnlp2smooth_canonicalizers_common_smooth_canons.R |only CVXR-1.9.2/CVXR/R/232_reductions_dnlp2smooth_canonicalizers_div_canon.R |only CVXR-1.9.2/CVXR/R/233_reductions_dnlp2smooth_canonicalizers_power_canon.R |only 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CVXR-1.9.2/CVXR/tests/testthat/helper-solvers.R | 39 CVXR-1.9.2/CVXR/tests/testthat/test-cvxpy-3180-parity-v19.R | 17 663 files changed, 1918 insertions(+), 901 deletions(-)
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-07-29 25.7.1
2024-03-09 0.5.12
2023-06-09 0.5.10
2023-05-25 0.5.6
2021-11-13 0.5.2
2021-02-01 0.4.3
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-12-02 1.4.8
2025-01-08 1.4.7
2023-10-31 1.4.6
2023-05-05 1.4.5
2023-03-09 1.4.4
2023-03-03 1.4.3
2023-01-13 1.4.2
2022-11-15 1.4.1
2022-09-27 1.4.0
2021-09-04 1.3.7
2021-05-31 1.3.6
2020-11-13 1.3.5
2019-10-18 1.3.4
2019-05-03 1.3.3
2018-10-23 1.3.2
2018-09-10 1.3.1
2017-07-13 1.3.0
2016-04-05 1.2.1
2016-03-17 1.2.0
Previous versions (as known to CRANberries) which should be available via the Archive link are:
2025-08-20 25.8.0
2023-03-04 0.5.5
2022-04-06 0.5.1
2021-07-23 0.4.3
2021-03-15 0.4.0
2021-02-10 0.3.0